BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00025344
         (411 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNY18094.1| pentatricopeptide repeat-containing protein [Trif...   196   2e-58
ref|XP_003619813.1| pentatricopeptide (PPR) repeat protein [Medi...   200   2e-58
ref|XP_013467376.1| pentatricopeptide (PPR) repeat protein [Medi...   198   2e-58
ref|XP_003619806.2| pentatricopeptide (PPR) repeat protein [Medi...   187   1e-57
dbj|GAU37917.1| hypothetical protein TSUD_163540 [Trifolium subt...   192   1e-57
dbj|GAU32091.1| hypothetical protein TSUD_292150 [Trifolium subt...   188   2e-57
gb|PNY02545.1| pentatricopeptide repeat-containing protein [Trif...   187   2e-57
gb|PNX71684.1| pentatricopeptide repeat-containing protein [Trif...   194   3e-57
ref|XP_013457840.1| pentatricopeptide (PPR) repeat protein [Medi...   192   4e-57
ref|XP_013452894.1| RNA processing factor 2, putative [Medicago ...   194   5e-57
dbj|GAU10557.1| hypothetical protein TSUD_419530 [Trifolium subt...   184   1e-56
dbj|GAU38663.1| hypothetical protein TSUD_292450 [Trifolium subt...   196   3e-56
ref|XP_013452896.1| pentatricopeptide (PPR) repeat protein [Medi...   189   4e-56
ref|XP_013452440.1| pentatricopeptide (PPR) repeat protein [Medi...   189   6e-56
dbj|GAU38661.1| hypothetical protein TSUD_292430 [Trifolium subt...   192   7e-56
ref|XP_003600424.1| pentatricopeptide (PPR) repeat protein [Medi...   188   7e-56
gb|PNX95522.1| pentatricopeptide (PPR) repeat protein [Trifolium...   189   9e-56
ref|XP_013442685.1| pentatricopeptide (PPR) repeat protein [Medi...   189   6e-55
gb|PNX85956.1| pentatricopeptide repeat-containing protein mitoc...   182   2e-54
ref|XP_013452880.1| pentatricopeptide (PPR) repeat protein [Medi...   184   3e-54

>gb|PNY18094.1| pentatricopeptide repeat-containing protein [Trifolium pratense]
          Length = 424

 Score =  196 bits (497), Expect = 2e-58
 Identities = 90/136 (66%), Positives = 112/136 (82%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           NLF+EM SK++VP T+TYS LI GLCK GR++ AWKL++EM+DR QPAN+ITY+SL+ AL
Sbjct: 238 NLFKEMQSKNIVPSTITYSTLIDGLCKSGRISRAWKLLDEMHDRGQPANVITYHSLMQAL 297

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK H VDK IAL+ KIKD+GI PD++TY +L+DG CK GR+KDAQ++FQDLLIK Y + V
Sbjct: 298 CKHHHVDKVIALIKKIKDQGIQPDMYTYNMLIDGLCKEGRLKDAQVMFQDLLIKGYNVTV 357

Query: 363 VAYNAMINGLCKESLF 410
             YN MINGLC E LF
Sbjct: 358 WTYNIMINGLCLEGLF 373



 Score = 97.1 bits (240), Expect = 6e-21
 Identities = 50/132 (37%), Positives = 81/132 (61%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           +L+ EM  + ++P+ VTY+ LIYG C +G+   A  +I+EM  ++   NI T++ L+DAL
Sbjct: 98  DLYSEMIGEGILPNDVTYNALIYGYCMVGQFKEAIGMIDEMVLKNIKPNIYTFSILIDAL 157

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK  ++ +A  +L  +  + +  DV TYT L+DG+  V  +  A++IF  +  +    NV
Sbjct: 158 CKEGKMKEAKNVLAVMVKQRVEIDVVTYTSLMDGYVLVNEVNKAKVIFNTMAQRGVVPNV 217

Query: 363 VAYNAMINGLCK 398
             Y+ MINGLCK
Sbjct: 218 YCYSVMINGLCK 229



 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 38/120 (31%), Positives = 73/120 (60%)
 Frame = +3

Query: 42  DTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKSHQVDKAIALL 221
           D  +Y  LI GLCK+G ++ A +L+  +  +    +++ Y++++D+LCK  +V  A  L 
Sbjct: 41  DQFSYGILINGLCKMGEISAAMELLRRIQGKLVRPDVVMYSTIIDSLCKDKRVIDAYDLY 100

Query: 222 MKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAYNAMINGLCKE 401
            ++   GI P+  TY  L+ G+C VG+ K+A  +  ++++K+   N+  ++ +I+ LCKE
Sbjct: 101 SEMIGEGILPNDVTYNALIYGYCMVGQFKEAIGMIDEMVLKNIKPNIYTFSILIDALCKE 160



 Score = 80.5 bits (197), Expect = 5e-15
 Identities = 40/128 (31%), Positives = 74/128 (57%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L   +  K + PD V YS +I  LCK  R+  A+ L  EM       N +TYN+L+   C
Sbjct: 64  LLRRIQGKLVRPDVVMYSTIIDSLCKDKRVIDAYDLYSEMIGEGILPNDVTYNALIYGYC 123

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVV 365
              Q  +AI ++ ++  + I P+++T++IL+D  CK G++K+A+ +   ++ +   ++VV
Sbjct: 124 MVGQFKEAIGMIDEMVLKNIKPNIYTFSILIDALCKEGKMKEAKNVLAVMVKQRVEIDVV 183

Query: 366 AYNAMING 389
            Y ++++G
Sbjct: 184 TYTSLMDG 191



 Score = 78.2 bits (191), Expect = 3e-14
 Identities = 38/132 (28%), Positives = 70/132 (53%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           N+   M  + +  D VTY++L+ G   +  +  A  +   M  R    N+  Y+ +++ L
Sbjct: 168 NVLAVMVKQRVEIDVVTYTSLMDGYVLVNEVNKAKVIFNTMAQRGVVPNVYCYSVMINGL 227

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK   +D+A+ L  +++ + I P   TY+ L+DG CK GRI  A  +  ++  +    NV
Sbjct: 228 CKIKMIDEAMNLFKEMQSKNIVPSTITYSTLIDGLCKSGRISRAWKLLDEMHDRGQPANV 287

Query: 363 VAYNAMINGLCK 398
           + Y++++  LCK
Sbjct: 288 ITYHSLMQALCK 299



 Score = 75.5 bits (184), Expect = 3e-13
 Identities = 37/124 (29%), Positives = 68/124 (54%)
 Frame = +3

Query: 39  PDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKSHQVDKAIAL 218
           PDT+T + L+ G+C  G +  A    +++  +    +  +Y  L++ LCK  ++  A+ L
Sbjct: 5   PDTITLNTLVKGMCLKGEVRKALHFHDKVVAQGFHLDQFSYGILINGLCKMGEISAAMEL 64

Query: 219 LMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAYNAMINGLCK 398
           L +I+ + + PDV  Y+ ++D  CK  R+ DA  ++ +++ +    N V YNA+I G C 
Sbjct: 65  LRRIQGKLVRPDVVMYSTIIDSLCKDKRVIDAYDLYSEMIGEGILPNDVTYNALIYGYCM 124

Query: 399 ESLF 410
              F
Sbjct: 125 VGQF 128



 Score = 66.2 bits (160), Expect = 6e-10
 Identities = 33/113 (29%), Positives = 62/113 (54%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L +++  + + PD  TY+ LI GLCK GRL  A  + +++  +     + TYN +++ LC
Sbjct: 309 LIKKIKDQGIQPDMYTYNMLIDGLCKEGRLKDAQVMFQDLLIKGYNVTVWTYNIMINGLC 368

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIK 344
                D+A A+L K++D G  PDV TY  ++    +      A+ + ++++ +
Sbjct: 369 LEGLFDEAFAMLQKMEDNGCIPDVVTYQTIIYTLFENNENDHAEKLLREMIAR 421


>ref|XP_003619813.1| pentatricopeptide (PPR) repeat protein [Medicago truncatula]
 gb|AES76031.1| pentatricopeptide (PPR) repeat protein [Medicago truncatula]
          Length = 614

 Score =  200 bits (508), Expect = 2e-58
 Identities = 93/136 (68%), Positives = 116/136 (85%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           NLF+EMHSKSM P+TVTY++LI GL K GR++ AW L+ EM++R QPA++ITY+SLLDAL
Sbjct: 365 NLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDAL 424

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK+HQVDKAI L+ KIKD+GI P+++TYTILVDG CK GR+KDAQ ++QDLLIK Y L+V
Sbjct: 425 CKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDV 484

Query: 363 VAYNAMINGLCKESLF 410
             YN M+NGLCKE LF
Sbjct: 485 KMYNVMVNGLCKEGLF 500



 Score = 92.8 bits (229), Expect = 3e-19
 Identities = 47/131 (35%), Positives = 78/131 (59%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           LF +M  K++ PD  T++ L+ GLCK G +  A  ++  M  +   +NI+TYNSL+D   
Sbjct: 261 LFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYF 320

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVV 365
              Q +KA  +   +  RG+ PDV +Y+I+++G CK   + +A  +F+++  K    N V
Sbjct: 321 LVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTV 380

Query: 366 AYNAMINGLCK 398
            YN++I+GL K
Sbjct: 381 TYNSLIDGLLK 391



 Score = 91.3 bits (225), Expect = 1e-18
 Identities = 46/130 (35%), Positives = 78/130 (60%)
 Frame = +3

Query: 12  EEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKS 191
           +++ +K    D V+Y  LI GLCK G    A +++ +++      N++ YN+++D+LCK 
Sbjct: 158 DDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKD 217

Query: 192 HQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAY 371
             V  A  L  ++  + I PDV TYT L+ G   VGR+K+A  +F  +L+K+   +V  +
Sbjct: 218 KLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTF 277

Query: 372 NAMINGLCKE 401
           N +++GLCKE
Sbjct: 278 NILVDGLCKE 287



 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 48/135 (35%), Positives = 77/135 (57%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           +L  EM  K + PD VTY+ LIYG   +GRL  A  L  +M  ++   ++ T+N L+D L
Sbjct: 225 DLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGL 284

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK  ++ KA  +L  +  +G+  ++ TY  L+DG+  V +   A  +F  +  +  T +V
Sbjct: 285 CKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDV 344

Query: 363 VAYNAMINGLCKESL 407
            +Y+ MINGLCK  +
Sbjct: 345 QSYSIMINGLCKTKM 359



 Score = 77.4 bits (189), Expect = 8e-14
 Identities = 37/127 (29%), Positives = 67/127 (52%)
 Frame = +3

Query: 18  MHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKSHQ 197
           +H ++ V     ++ ++  L KL     A    ++M  +    ++ T+N L++  C    
Sbjct: 55  LHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGH 114

Query: 198 VDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAYNA 377
           ++ A ++L KI   G HPD  T T L+ G C  G++++A     D++ K + L+ V+Y  
Sbjct: 115 LNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGT 174

Query: 378 MINGLCK 398
           +INGLCK
Sbjct: 175 LINGLCK 181



 Score = 68.6 bits (166), Expect = 9e-11
 Identities = 38/132 (28%), Positives = 68/132 (51%)
 Frame = +3

Query: 12  EEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKS 191
           ++M  K + PD  T++ LI   C LG L  A+ ++ ++       + +T  +L+  LC +
Sbjct: 88  KQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLN 147

Query: 192 HQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAY 371
            +V +A+     +  +G H D  +Y  L++G CK G  + A  + + +       NVV Y
Sbjct: 148 GKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMY 207

Query: 372 NAMINGLCKESL 407
           N +I+ LCK+ L
Sbjct: 208 NTIIDSLCKDKL 219



 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 31/113 (27%), Positives = 63/113 (55%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L  ++  + + P+  TY+ L+ GLCK GRL  A  + +++  +    ++  YN +++ LC
Sbjct: 436 LITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLC 495

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIK 344
           K    D+A++L+ K++D G  PD  TY  LV    +  +   A  + ++++++
Sbjct: 496 KEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQ 548


>ref|XP_013467376.1| pentatricopeptide (PPR) repeat protein [Medicago truncatula]
 gb|KEH41413.1| pentatricopeptide (PPR) repeat protein [Medicago truncatula]
          Length = 545

 Score =  198 bits (504), Expect = 2e-58
 Identities = 95/135 (70%), Positives = 110/135 (81%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           +LFEEMHS +M  D +TYS+LI GLCK GRL  AWKL +EM DR QP ++ITYNSLLDAL
Sbjct: 359 SLFEEMHSTNMTLDVITYSSLINGLCKSGRLISAWKLFDEMLDRGQPPDVITYNSLLDAL 418

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CKSHQ DKAIALL K+KD+GI  D+FTY IL+DG CK GR+ DAQ IF+DLLIK Y ++V
Sbjct: 419 CKSHQTDKAIALLSKMKDQGIQADIFTYNILIDGLCKDGRLDDAQKIFRDLLIKSYNVDV 478

Query: 363 VAYNAMINGLCKESL 407
           V YN MINGLCKESL
Sbjct: 479 VTYNVMINGLCKESL 493



 Score =  102 bits (254), Expect = 1e-22
 Identities = 48/132 (36%), Positives = 84/132 (63%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           +L+ EM  K + PD  TY++LI+G C +G+L   + L+ EM  ++   ++ T+N+L+DAL
Sbjct: 219 DLYSEMIRKRISPDVFTYTSLIHGFCIVGQLKEVFVLLNEMVLKNINPDVYTFNTLVDAL 278

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
            K  +V +A  L+  +   G+ P++ TY++L+DG+C V  +  A+ IF  ++ +  T ++
Sbjct: 279 FKEGKVKEAKCLIAVMMKEGVEPNIVTYSVLMDGYCLVNEVNKAKDIFNSMMQRGMTPDI 338

Query: 363 VAYNAMINGLCK 398
            +Y  MINGLCK
Sbjct: 339 QSYTIMINGLCK 350



 Score = 95.5 bits (236), Expect = 3e-20
 Identities = 47/131 (35%), Positives = 81/131 (61%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L  EM  K++ PD  T++ L+  L K G++  A  LI  M       NI+TY+ L+D  C
Sbjct: 255 LLNEMVLKNINPDVYTFNTLVDALFKEGKVKEAKCLIAVMMKEGVEPNIVTYSVLMDGYC 314

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVV 365
             ++V+KA  +   +  RG+ PD+ +YTI+++G CK+  + +A  +F+++   + TL+V+
Sbjct: 315 LVNEVNKAKDIFNSMMQRGMTPDIQSYTIMINGLCKMKMLDEAVSLFEEMHSTNMTLDVI 374

Query: 366 AYNAMINGLCK 398
            Y+++INGLCK
Sbjct: 375 TYSSLINGLCK 385



 Score = 94.4 bits (233), Expect = 8e-20
 Identities = 48/133 (36%), Positives = 76/133 (57%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           ++F  M  + M PD  +Y+ +I GLCK+  L  A  L EEM+  +   ++ITY+SL++ L
Sbjct: 324 DIFNSMMQRGMTPDIQSYTIMINGLCKMKMLDEAVSLFEEMHSTNMTLDVITYSSLINGL 383

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CKS ++  A  L  ++ DRG  PDV TY  L+D  CK  +   A  +   +  +    ++
Sbjct: 384 CKSGRLISAWKLFDEMLDRGQPPDVITYNSLLDALCKSHQTDKAIALLSKMKDQGIQADI 443

Query: 363 VAYNAMINGLCKE 401
             YN +I+GLCK+
Sbjct: 444 FTYNILIDGLCKD 456



 Score = 83.2 bits (204), Expect = 7e-16
 Identities = 41/120 (34%), Positives = 75/120 (62%), Gaps = 2/120 (1%)
 Frame = +3

Query: 48  VTYSNLIYGLCKLGRLTCAWKLIEEMNDR--DQPANIITYNSLLDALCKSHQVDKAIALL 221
           V+Y  LI GLCK+G+   A +L+  +  +   +P +++ Y+ ++D LCK   V+ A  L 
Sbjct: 163 VSYGTLINGLCKVGQTQAALQLLRRIERQLLFRP-DVVMYSIIIDNLCKDKHVNDAFDLY 221

Query: 222 MKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAYNAMINGLCKE 401
            ++  + I PDVFTYT L+ GFC VG++K+  ++  ++++K+   +V  +N +++ L KE
Sbjct: 222 SEMIRKRISPDVFTYTSLIHGFCIVGQLKEVFVLLNEMVLKNINPDVYTFNTLVDALFKE 281



 Score = 82.8 bits (203), Expect = 1e-15
 Identities = 40/131 (30%), Positives = 73/131 (55%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L   M  + + P+ VTYS L+ G C +  +  A  +   M  R    +I +Y  +++ LC
Sbjct: 290 LIAVMMKEGVEPNIVTYSVLMDGYCLVNEVNKAKDIFNSMMQRGMTPDIQSYTIMINGLC 349

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVV 365
           K   +D+A++L  ++    +  DV TY+ L++G CK GR+  A  +F ++L +    +V+
Sbjct: 350 KMKMLDEAVSLFEEMHSTNMTLDVITYSSLINGLCKSGRLISAWKLFDEMLDRGQPPDVI 409

Query: 366 AYNAMINGLCK 398
            YN++++ LCK
Sbjct: 410 TYNSLLDALCK 420



 Score = 75.1 bits (183), Expect = 5e-13
 Identities = 38/119 (31%), Positives = 66/119 (55%)
 Frame = +3

Query: 39  PDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKSHQVDKAIAL 218
           PD V YS +I  LCK   +  A+ L  EM  +    ++ TY SL+   C   Q+ +   L
Sbjct: 196 PDVVMYSIIIDNLCKDKHVNDAFDLYSEMIRKRISPDVFTYTSLIHGFCIVGQLKEVFVL 255

Query: 219 LMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAYNAMINGLC 395
           L ++  + I+PDV+T+  LVD   K G++K+A+ +   ++ +    N+V Y+ +++G C
Sbjct: 256 LNEMVLKNINPDVYTFNTLVDALFKEGKVKEAKCLIAVMMKEGVEPNIVTYSVLMDGYC 314



 Score = 72.0 bits (175), Expect = 6e-12
 Identities = 35/113 (30%), Positives = 64/113 (56%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L  +M  + +  D  TY+ LI GLCK GRL  A K+  ++  +    +++TYN +++ LC
Sbjct: 430 LLSKMKDQGIQADIFTYNILIDGLCKDGRLDDAQKIFRDLLIKSYNVDVVTYNVMINGLC 489

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIK 344
           K   +D+A+ LL K++ +G  PD  TY I++      G    A+ + ++++ +
Sbjct: 490 KESLLDEALTLLSKMEAKGCIPDAITYEIIIRALFGKGVNDKAEKLLREMIAR 542



 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
 Frame = +3

Query: 9   FEEMHSKSMVPDTVTYSNLIYGLCKLGR--LTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           F  M      P  + ++ ++  L K+ +   +    L  +M  +    +I+T + L++  
Sbjct: 43  FNRMLRMRPTPPIIEFNQILTSLVKIDKNNFSTVISLFRQMEFQRIHPSIVTLSILINCY 102

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
               Q+  A +L  KI   G HPDV  +  L+ G C    +K+A      L+ + + L+ 
Sbjct: 103 SHLRQMKFAFSLFGKILKMGCHPDVIIFNTLIKGLCLNNDVKEALHFHDKLVAQGFQLSK 162

Query: 363 VAYNAMINGLCK 398
           V+Y  +INGLCK
Sbjct: 163 VSYGTLINGLCK 174



 Score = 57.8 bits (138), Expect = 5e-07
 Identities = 39/137 (28%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           +LF +M  + + P  VT S LI     L ++  A+ L  ++       ++I +N+L+  L
Sbjct: 78  SLFRQMEFQRIHPSIVTLSILINCYSHLRQMKFAFSLFGKILKMGCHPDVIIFNTLIKGL 137

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDA----QMIFQDLLIKDY 350
           C ++ V +A+    K+  +G      +Y  L++G CKVG+ + A    + I + LL +  
Sbjct: 138 CLNNDVKEALHFHDKLVAQGFQLSKVSYGTLINGLCKVGQTQAALQLLRRIERQLLFRP- 196

Query: 351 TLNVVAYNAMINGLCKE 401
             +VV Y+ +I+ LCK+
Sbjct: 197 --DVVMYSIIIDNLCKD 211


>ref|XP_003619806.2| pentatricopeptide (PPR) repeat protein [Medicago truncatula]
 gb|AES76024.2| pentatricopeptide (PPR) repeat protein [Medicago truncatula]
          Length = 202

 Score =  187 bits (474), Expect = 1e-57
 Identities = 88/136 (64%), Positives = 109/136 (80%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           NLF+E+H K+M PD V YS+LI GLCK G+++  W LI++M+DR Q A+II Y SLLDAL
Sbjct: 16  NLFKELHLKNMAPDIVAYSSLIDGLCKSGKISDVWDLIDDMHDRGQQADIIIYTSLLDAL 75

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
            K+HQVDKAIALL KIKDRGI PD+FTYT+LVDG CK GR+KDAQ +++DL++K Y  N 
Sbjct: 76  FKNHQVDKAIALLKKIKDRGIEPDMFTYTMLVDGLCKNGRLKDAQEVYRDLMVKGYHFNA 135

Query: 363 VAYNAMINGLCKESLF 410
             +N MINGLCKE LF
Sbjct: 136 CMHNVMINGLCKEGLF 151



 Score = 63.5 bits (153), Expect = 1e-09
 Identities = 33/111 (29%), Positives = 60/111 (54%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L +++  + + PD  TY+ L+ GLCK GRL  A ++  ++  +    N   +N +++ LC
Sbjct: 87  LLKKIKDRGIEPDMFTYTMLVDGLCKNGRLKDAQEVYRDLMVKGYHFNACMHNVMINGLC 146

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLL 338
           K    D+A+ +L +++D G  PDV TY  L+    K      A  + +++L
Sbjct: 147 KEGLFDEALFVLSEMEDNGCTPDVVTYKTLIRALFKNDMNDKAVKLLREML 197


>dbj|GAU37917.1| hypothetical protein TSUD_163540 [Trifolium subterraneum]
          Length = 393

 Score =  192 bits (489), Expect = 1e-57
 Identities = 90/136 (66%), Positives = 109/136 (80%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           NLF+EM SK ++P TVTYS LI GLCKLGR++ AW+L++EM+DR QPAN+ITY  L+ AL
Sbjct: 207 NLFKEMQSKKIIPSTVTYSTLIDGLCKLGRISHAWELLDEMHDRGQPANVITYTCLVQAL 266

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK H VDKAI+L+ KIKD+GI PDV+TY +L+DG CK GR+ DAQ IFQDLLIK Y + V
Sbjct: 267 CKIHHVDKAISLVKKIKDQGIQPDVYTYNVLIDGLCKEGRLMDAQAIFQDLLIKGYKVTV 326

Query: 363 VAYNAMINGLCKESLF 410
             YN MINGLC E LF
Sbjct: 327 WTYNIMINGLCLEGLF 342



 Score = 96.7 bits (239), Expect = 6e-21
 Identities = 48/132 (36%), Positives = 78/132 (59%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L+ EM +K + P  VT+++L+YGLCK+  +  A  L +EM  +    + +TY++L+D LC
Sbjct: 173 LYSEMTAKKISPTVVTFNSLLYGLCKIKMMDEAMNLFKEMQSKKIIPSTVTYSTLIDGLC 232

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVV 365
           K  ++  A  LL ++ DRG   +V TYT LV   CK+  +  A  + + +  +    +V 
Sbjct: 233 KLGRISHAWELLDEMHDRGQPANVITYTCLVQALCKIHHVDKAISLVKKIKDQGIQPDVY 292

Query: 366 AYNAMINGLCKE 401
            YN +I+GLCKE
Sbjct: 293 TYNVLIDGLCKE 304



 Score = 85.9 bits (211), Expect = 5e-17
 Identities = 42/131 (32%), Positives = 73/131 (55%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           +  ++  K +  D V ++ +I  LCK   +T A++L  EM  +     ++T+NSLL  LC
Sbjct: 138 MLRKIEGKLVNTDVVMHNIIIDSLCKDKFVTDAYELYSEMTAKKISPTVVTFNSLLYGLC 197

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVV 365
           K   +D+A+ L  +++ + I P   TY+ L+DG CK+GRI  A  +  ++  +    NV+
Sbjct: 198 KIKMMDEAMNLFKEMQSKKIIPSTVTYSTLIDGLCKLGRISHAWELLDEMHDRGQPANVI 257

Query: 366 AYNAMINGLCK 398
            Y  ++  LCK
Sbjct: 258 TYTCLVQALCK 268



 Score = 70.9 bits (172), Expect = 1e-11
 Identities = 34/120 (28%), Positives = 68/120 (56%)
 Frame = +3

Query: 39  PDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKSHQVDKAIAL 218
           P+TVT++ L+  LC  G +  A    + +  +    + ++Y +L++ LCK  +   A+ +
Sbjct: 79  PNTVTFNTLMKDLCLNGDVKQALHFHDHVVAKGFQLDHVSYGTLINGLCKMGETRAALQM 138

Query: 219 LMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAYNAMINGLCK 398
           L KI+ + ++ DV  + I++D  CK   + DA  ++ ++  K  +  VV +N+++ GLCK
Sbjct: 139 LRKIEGKLVNTDVVMHNIIIDSLCKDKFVTDAYELYSEMTAKKISPTVVTFNSLLYGLCK 198



 Score = 68.6 bits (166), Expect = 8e-11
 Identities = 34/114 (29%), Positives = 64/114 (56%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           +L +++  + + PD  TY+ LI GLCK GRL  A  + +++  +     + TYN +++ L
Sbjct: 277 SLVKKIKDQGIQPDVYTYNVLIDGLCKEGRLMDAQAIFQDLLIKGYKVTVWTYNIMINGL 336

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIK 344
           C     D+A+ALL K+KD G  PD  TY  ++    +  +   A+ + ++++ +
Sbjct: 337 CLEGLFDEAMALLSKMKDNGCIPDAVTYGTIIRALFENDKNDKAKKLLREMIAR 390



 Score = 68.2 bits (165), Expect = 1e-10
 Identities = 36/134 (26%), Positives = 73/134 (54%), Gaps = 1/134 (0%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKL-GRLTCAWKLIEEMNDRDQPANIITYNSLLDA 179
           +L+ +M  K + PD +T + LI   C + G++T ++ ++ ++       N +T+N+L+  
Sbjct: 31  SLYRQMEFKGITPDLITLNILINCYCNIDGQITFSFSVLGKILKTGYQPNTVTFNTLMKD 90

Query: 180 LCKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLN 359
           LC +  V +A+     +  +G   D  +Y  L++G CK+G  + A  + + +  K    +
Sbjct: 91  LCLNGDVKQALHFHDHVVAKGFQLDHVSYGTLINGLCKMGETRAALQMLRKIEGKLVNTD 150

Query: 360 VVAYNAMINGLCKE 401
           VV +N +I+ LCK+
Sbjct: 151 VVMHNIIIDSLCKD 164


>dbj|GAU32091.1| hypothetical protein TSUD_292150 [Trifolium subterraneum]
          Length = 264

 Score =  188 bits (478), Expect = 2e-57
 Identities = 88/136 (64%), Positives = 106/136 (77%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           NLFEEMH K+M+P+TVTYS LI GLCK GR T AW+L++EM+DR QP N+ TYNS L  L
Sbjct: 76  NLFEEMHFKNMIPNTVTYSTLIDGLCKSGRTTYAWELVDEMSDRGQPPNVFTYNSFLHTL 135

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CKSH +DKAIAL+ KIKD+GI PD++TYT L+DG CK GR+KDA  +F+DLL K Y L+V
Sbjct: 136 CKSHHLDKAIALVKKIKDQGIMPDLYTYTTLIDGLCKGGRLKDALKVFKDLLAKGYNLDV 195

Query: 363 VAYNAMINGLCKESLF 410
           V Y  MI GLC   LF
Sbjct: 196 VTYTTMICGLCNAGLF 211



 Score = 78.6 bits (192), Expect = 8e-15
 Identities = 41/127 (32%), Positives = 67/127 (52%)
 Frame = +3

Query: 18  MHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKSHQ 197
           M  +SM P+ VTY+ L+ G C    +  A  +   M  R    ++ TYN +++  CKS  
Sbjct: 11  MMKQSMKPNVVTYNTLMDGYCLCNEVKKAKYIFNTMVQRGMMPDVKTYNIMINGFCKSKM 70

Query: 198 VDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAYNA 377
           V +AI L  ++  + + P+  TY+ L+DG CK GR   A  +  ++  +    NV  YN+
Sbjct: 71  VGEAINLFEEMHFKNMIPNTVTYSTLIDGLCKSGRTTYAWELVDEMSDRGQPPNVFTYNS 130

Query: 378 MINGLCK 398
            ++ LCK
Sbjct: 131 FLHTLCK 137



 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 34/96 (35%), Positives = 59/96 (61%)
 Frame = +3

Query: 111 LIEEMNDRDQPANIITYNSLLDALCKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFC 290
           ++  M  +    N++TYN+L+D  C  ++V KA  +   +  RG+ PDV TY I+++GFC
Sbjct: 7   MLAVMMKQSMKPNVVTYNTLMDGYCLCNEVKKAKYIFNTMVQRGMMPDVKTYNIMINGFC 66

Query: 291 KVGRIKDAQMIFQDLLIKDYTLNVVAYNAMINGLCK 398
           K   + +A  +F+++  K+   N V Y+ +I+GLCK
Sbjct: 67  KSKMVGEAINLFEEMHFKNMIPNTVTYSTLIDGLCK 102



 Score = 68.6 bits (166), Expect = 4e-11
 Identities = 31/113 (27%), Positives = 66/113 (58%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L +++  + ++PD  TY+ LI GLCK GRL  A K+ +++  +    +++TY +++  LC
Sbjct: 147 LVKKIKDQGIMPDLYTYTTLIDGLCKGGRLKDALKVFKDLLAKGYNLDVVTYTTMICGLC 206

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIK 344
            +   ++A  LL  ++D+G  PD  T+ I++    + G    A+ + ++++ +
Sbjct: 207 NAGLFEEAFVLLSVMEDKGCFPDASTFEIMICALFESGENDKAEKLLREMIAR 259


>gb|PNY02545.1| pentatricopeptide repeat-containing protein [Trifolium pratense]
          Length = 253

 Score =  187 bits (476), Expect = 2e-57
 Identities = 87/136 (63%), Positives = 109/136 (80%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           NLFEEM SK + PDT+ YS+LI GLCKLGR++ A +L++EM+DR QPAN+ITYNSLL AL
Sbjct: 67  NLFEEMQSKKITPDTIAYSSLIDGLCKLGRISHALELVDEMHDRGQPANVITYNSLLHAL 126

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK H VDKAI L+ KIKD GI PD+ TY +++DG CK GR+++A++IFQDLLIK Y + V
Sbjct: 127 CKIHHVDKAITLVKKIKDHGIQPDMHTYNVIIDGLCKEGRLEEARVIFQDLLIKGYKITV 186

Query: 363 VAYNAMINGLCKESLF 410
           + Y  MINGLC E LF
Sbjct: 187 LTYTIMINGLCLEGLF 202



 Score = 91.3 bits (225), Expect = 1e-19
 Identities = 41/127 (32%), Positives = 75/127 (59%)
 Frame = +3

Query: 18  MHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKSHQ 197
           M  + + P+ VTY+ L+ G C + ++  A  +   M D++   N+ +YN +++ LCK   
Sbjct: 2   MMKEGIKPNVVTYNALMDGYCLVNQVNKALDIFNTMADKEVTPNVWSYNIIINGLCKIRM 61

Query: 198 VDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAYNA 377
           VD+A+ L  +++ + I PD   Y+ L+DG CK+GRI  A  +  ++  +    NV+ YN+
Sbjct: 62  VDEAMNLFEEMQSKKITPDTIAYSSLIDGLCKLGRISHALELVDEMHDRGQPANVITYNS 121

Query: 378 MINGLCK 398
           +++ LCK
Sbjct: 122 LLHALCK 128



 Score = 65.1 bits (157), Expect = 7e-10
 Identities = 33/113 (29%), Positives = 61/113 (53%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L +++    + PD  TY+ +I GLCK GRL  A  + +++  +     ++TY  +++ LC
Sbjct: 138 LVKKIKDHGIQPDMHTYNVIIDGLCKEGRLEEARVIFQDLLIKGYKITVLTYTIMINGLC 197

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIK 344
                D+AIALL K+KD G  PD  TY  ++    +     +A+ +  +++ +
Sbjct: 198 LEGLFDEAIALLSKMKDNGCIPDAVTYVTIIRALFENDENDNAKKLLHEMIAR 250


>gb|PNX71684.1| pentatricopeptide repeat-containing protein [Trifolium pratense]
          Length = 471

 Score =  194 bits (492), Expect = 3e-57
 Identities = 91/136 (66%), Positives = 113/136 (83%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           +LF+EMH K+M P+TVTY++LI GLCK GR++  W L++EM+DR +PAN+ITY+SLLDAL
Sbjct: 229 SLFKEMHLKNMAPNTVTYNSLIDGLCKSGRISDVWDLLDEMHDRGKPANVITYSSLLDAL 288

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK+HQVDKAI LL KIKD+GI  D++TYTIL+DG CK GR+KDAQ I+QDLLIK Y  +V
Sbjct: 289 CKNHQVDKAIELLRKIKDQGIQLDMYTYTILIDGLCKNGRLKDAQEIYQDLLIKGYNFDV 348

Query: 363 VAYNAMINGLCKESLF 410
             Y  MINGLCKE LF
Sbjct: 349 KMYTVMINGLCKEGLF 364



 Score =  103 bits (257), Expect = 3e-23
 Identities = 53/135 (39%), Positives = 80/135 (59%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           +L+ EM  K + PD VTY+ LIYGLC +G+L  A  L+ EM  ++   N+ T+  L+D L
Sbjct: 89  HLYSEMIVKKIXPDVVTYTTLIYGLCSVGQLNEAVGLLNEMLLKNISPNVHTFTELVDGL 148

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK  +++ A  +L  +  +G  PDV TYT L+ G+  V  +  A  +F  +  ++   NV
Sbjct: 149 CKEGEIEIARNVLAVMIKQGFKPDVATYTSLIYGYFLVKEVNKATYVFNTIARREVKPNV 208

Query: 363 VAYNAMINGLCKESL 407
            +YN MINGLCK  +
Sbjct: 209 HSYNVMINGLCKNKM 223



 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 43/130 (33%), Positives = 78/130 (60%)
 Frame = +3

Query: 12  EEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKS 191
           +++ SK    D V+Y+ LI  LCK G    A +++ ++ +     N++ YN+++++LCK 
Sbjct: 22  DDVISKGFHLDRVSYNILIKALCKTGETKAALEILRKIEELMVKPNVVMYNTVINSLCKD 81

Query: 192 HQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAY 371
             V  A  L  ++  + I PDV TYT L+ G C VG++ +A  +  ++L+K+ + NV  +
Sbjct: 82  KLVSDAFHLYSEMIVKKIXPDVVTYTTLIYGLCSVGQLNEAVGLLNEMLLKNISPNVHTF 141

Query: 372 NAMINGLCKE 401
             +++GLCKE
Sbjct: 142 TELVDGLCKE 151



 Score = 86.3 bits (212), Expect = 5e-17
 Identities = 40/132 (30%), Positives = 74/132 (56%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           N+   M  +   PD  TY++LIYG   +  +  A  +   +  R+   N+ +YN +++ L
Sbjct: 159 NVLAVMIKQGFKPDVATYTSLIYGYFLVKEVNKATYVFNTIARREVKPNVHSYNVMINGL 218

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK+  VD+A++L  ++  + + P+  TY  L+DG CK GRI D   +  ++  +    NV
Sbjct: 219 CKNKMVDEAVSLFKEMHLKNMAPNTVTYNSLIDGLCKSGRISDVWDLLDEMHDRGKPANV 278

Query: 363 VAYNAMINGLCK 398
           + Y+++++ LCK
Sbjct: 279 ITYSSLLDALCK 290



 Score = 68.6 bits (166), Expect = 9e-11
 Identities = 32/113 (28%), Positives = 64/113 (56%)
 Frame = +3

Query: 57  SNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKSHQVDKAIALLMKIKD 236
           + LI G+C  G++  A    +++  +    + ++YN L+ ALCK+ +   A+ +L KI++
Sbjct: 2   TTLINGMCLSGQVNKALHFHDDVISKGFHLDRVSYNILIKALCKTGETKAALEILRKIEE 61

Query: 237 RGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAYNAMINGLC 395
             + P+V  Y  +++  CK   + DA  ++ ++++K    +VV Y  +I GLC
Sbjct: 62  LMVKPNVVMYNTVINSLCKDKLVSDAFHLYSEMIVKKIXPDVVTYTTLIYGLC 114



 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 35/139 (25%), Positives = 70/139 (50%), Gaps = 7/139 (5%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L  ++  + +  D  TY+ LI GLCK GRL  A ++ +++  +    ++  Y  +++ LC
Sbjct: 300 LLRKIKDQGIQLDMYTYTILIDGLCKNGRLKDAQEIYQDLLIKGYNFDVKMYTVMINGLC 359

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYT---- 353
           K    D+A++L+ K+++ G  PD  TY  L+    +  +   A+ +  +++ +D      
Sbjct: 360 KEGLFDEALSLVSKMEENGCTPDAVTYETLIRALSEDDKNDKAEKLLHEMISRDKEGPLL 419

Query: 354 ---LNVVAYNAMINGLCKE 401
              L + +Y   +   CKE
Sbjct: 420 FNHLLLNSYGRAVGSRCKE 438



 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
 Frame = +3

Query: 165 SLLDALCKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIF---QDL 335
           +L++ +C S QV+KA+     +  +G H D  +Y IL+   CK G  K A  I    ++L
Sbjct: 3   TLINGMCLSGQVNKALHFHDDVISKGFHLDRVSYNILIKALCKTGETKAALEILRKIEEL 62

Query: 336 LIKDYTLNVVAYNAMINGLCKESL 407
           ++K    NVV YN +IN LCK+ L
Sbjct: 63  MVKP---NVVMYNTVINSLCKDKL 83


>ref|XP_013457840.1| pentatricopeptide (PPR) repeat protein [Medicago truncatula]
 gb|KEH31871.1| pentatricopeptide (PPR) repeat protein [Medicago truncatula]
          Length = 440

 Score =  192 bits (489), Expect = 4e-57
 Identities = 89/136 (65%), Positives = 115/136 (84%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           NLF+E+  K+M PDT+TY++LI GLCK GR++  W LI+EM++  QPA++ITYNSLLDAL
Sbjct: 254 NLFKELQIKNMAPDTITYNSLIDGLCKSGRISDVWDLIDEMHNIGQPADVITYNSLLDAL 313

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK+HQVDKAI LL KIKD+GI P+++TYTILVDG CK GR+KDAQ+++Q+LLIK Y L+V
Sbjct: 314 CKNHQVDKAITLLTKIKDQGIQPNMYTYTILVDGLCKNGRLKDAQVVYQNLLIKGYHLDV 373

Query: 363 VAYNAMINGLCKESLF 410
             Y+ M+NGLCKE LF
Sbjct: 374 KMYSVMVNGLCKEGLF 389



 Score = 94.0 bits (232), Expect = 8e-20
 Identities = 48/134 (35%), Positives = 79/134 (58%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L  EM  K + PD VTY+ LI+G C +G+   A  L+ +M  ++   ++ T+N+L+D LC
Sbjct: 115 LCSEMIVKRIFPDVVTYTTLIHGFCIVGQFKEAVGLLNQMLLKNISLDVQTFNTLVDGLC 174

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVV 365
           K  +V +A  +L  +  +G+ PD+FTY  L+DG+  V  +  A  +F  +       +V 
Sbjct: 175 KEGEVKQARNVLAVMIKQGVDPDIFTYISLMDGYFLVKEVNKATYVFNTIARSGVIPSVQ 234

Query: 366 AYNAMINGLCKESL 407
           +Y+ MINGLCK+ +
Sbjct: 235 SYSVMINGLCKKKM 248



 Score = 77.4 bits (189), Expect = 7e-14
 Identities = 42/134 (31%), Positives = 73/134 (54%), Gaps = 13/134 (9%)
 Frame = +3

Query: 39  PDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLD-------------A 179
           PDT+T + ++ G+C  G++  A    + +  +    N +T+  L               +
Sbjct: 43  PDTITLTTVMKGMCLTGQVRKALHFHDHVIAKGFKLNHVTFMGLWSTDYVNLEKQELPCS 102

Query: 180 LCKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLN 359
           LCK+  +  A AL  ++  + I PDV TYT L+ GFC VG+ K+A  +   +L+K+ +L+
Sbjct: 103 LCKNKLIIDASALCSEMIVKRIFPDVVTYTTLIHGFCIVGQFKEAVGLLNQMLLKNISLD 162

Query: 360 VVAYNAMINGLCKE 401
           V  +N +++GLCKE
Sbjct: 163 VQTFNTLVDGLCKE 176



 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 27/113 (23%), Positives = 60/113 (53%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L  ++  + + P+  TY+ L+ GLCK GRL  A  + + +  +    ++  Y+ +++ LC
Sbjct: 325 LLTKIKDQGIQPNMYTYTILVDGLCKNGRLKDAQVVYQNLLIKGYHLDVKMYSVMVNGLC 384

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIK 344
           K    D A++L+ K++D    P+  TY  L+    + G+      + ++++++
Sbjct: 385 KEGLFDDALSLVSKMEDNSCTPNAVTYETLIRALFENGKNDKTVKLLREMIVR 437


>ref|XP_013452894.1| RNA processing factor 2, putative [Medicago truncatula]
 gb|KEH26922.1| RNA processing factor 2, putative [Medicago truncatula]
          Length = 541

 Score =  194 bits (494), Expect = 5e-57
 Identities = 92/136 (67%), Positives = 111/136 (81%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           NLF+EMHS +M PDTV+Y++LI GLCK GR++  W L+ EM+D  QPAN+ITYNSLLDAL
Sbjct: 355 NLFKEMHSSNMTPDTVSYNSLIDGLCKSGRISDVWDLLVEMHDIGQPANVITYNSLLDAL 414

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK+HQVDKAIALL KIKD+GI P+++TYTILVDG CK GR++DAQ I+ DLL K Y LNV
Sbjct: 415 CKNHQVDKAIALLKKIKDQGIQPNMYTYTILVDGLCKNGRLEDAQEIYHDLLTKGYPLNV 474

Query: 363 VAYNAMINGLCKESLF 410
             YN M+N  CKE LF
Sbjct: 475 SMYNVMVNEFCKEGLF 490



 Score = 98.6 bits (244), Expect = 3e-21
 Identities = 48/135 (35%), Positives = 83/135 (61%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           +L+ EM    + P+ +TY+ LIYG   LG++  A  L+ +M+ ++   +++T+ +L+D L
Sbjct: 215 DLYSEMIVNKIHPNVITYNTLIYGFSILGQMKEAVGLLNQMSMKNISPDVLTFTTLVDGL 274

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK  +V KA  +L  +  + + PD+ TY+ L+DG+  V  +  A+ +F  L ++  T NV
Sbjct: 275 CKQGEVKKARHVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLPLRGVTPNV 334

Query: 363 VAYNAMINGLCKESL 407
            +YN MINGLCK  +
Sbjct: 335 FSYNIMINGLCKNKM 349



 Score = 92.8 bits (229), Expect = 3e-19
 Identities = 45/131 (34%), Positives = 81/131 (61%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L  +M  K++ PD +T++ L+ GLCK G +  A  ++  M  +    +I+TY+SL+D   
Sbjct: 251 LLNQMSMKNISPDVLTFTTLVDGLCKQGEVKKARHVLAVMIKQRVEPDIVTYSSLMDGYF 310

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVV 365
              +V+KA  L   +  RG+ P+VF+Y I+++G CK   + +A  +F+++   + T + V
Sbjct: 311 LVKEVNKAKHLFNTLPLRGVTPNVFSYNIMINGLCKNKMVNEAANLFKEMHSSNMTPDTV 370

Query: 366 AYNAMINGLCK 398
           +YN++I+GLCK
Sbjct: 371 SYNSLIDGLCK 381



 Score = 81.6 bits (200), Expect = 2e-15
 Identities = 39/118 (33%), Positives = 70/118 (59%)
 Frame = +3

Query: 48  VTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKSHQVDKAIALLMK 227
           V+Y  LI GLCK G    A +L+E++       +++ YN+++DALCK   V     L  +
Sbjct: 160 VSYGILINGLCKSGETKAALQLLEKIKGLLVKPDVVMYNTIIDALCKDKLVSDGYDLYSE 219

Query: 228 IKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAYNAMINGLCKE 401
           +    IHP+V TY  L+ GF  +G++K+A  +   + +K+ + +V+ +  +++GLCK+
Sbjct: 220 MIVNKIHPNVITYNTLIYGFSILGQMKEAVGLLNQMSMKNISPDVLTFTTLVDGLCKQ 277



 Score = 78.6 bits (192), Expect = 3e-14
 Identities = 40/127 (31%), Positives = 68/127 (53%)
 Frame = +3

Query: 18  MHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKSHQ 197
           M  + + PD VTYS+L+ G   +  +  A  L   +  R    N+ +YN +++ LCK+  
Sbjct: 290 MIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLPLRGVTPNVFSYNIMINGLCKNKM 349

Query: 198 VDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAYNA 377
           V++A  L  ++    + PD  +Y  L+DG CK GRI D   +  ++       NV+ YN+
Sbjct: 350 VNEAANLFKEMHSSNMTPDTVSYNSLIDGLCKSGRISDVWDLLVEMHDIGQPANVITYNS 409

Query: 378 MINGLCK 398
           +++ LCK
Sbjct: 410 LLDALCK 416



 Score = 75.1 bits (183), Expect = 5e-13
 Identities = 38/117 (32%), Positives = 63/117 (53%)
 Frame = +3

Query: 39  PDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKSHQVDKAIAL 218
           P+TVT + LI GLC  G++  A    + +  +    N ++Y  L++ LCKS +   A+ L
Sbjct: 122 PNTVTLTTLINGLCLNGQIRKALYFHDHVIAKGFHLNHVSYGILINGLCKSGETKAALQL 181

Query: 219 LMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAYNAMING 389
           L KIK   + PDV  Y  ++D  CK   + D   ++ ++++     NV+ YN +I G
Sbjct: 182 LEKIKGLLVKPDVVMYNTIIDALCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLIYG 238



 Score = 74.3 bits (181), Expect = 9e-13
 Identities = 37/127 (29%), Positives = 66/127 (51%)
 Frame = +3

Query: 18  MHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKSHQ 197
           +H  +  P    +  ++  L K+   + A     +M  +    NI+T + L+++ C  +Q
Sbjct: 45  LHMNNPTPPIFEFGKILGSLVKMNHFSTAISFSHQMELKGIQPNIVTLSILINSFCHLNQ 104

Query: 198 VDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAYNA 377
           ++ A ++L KI   G  P+  T T L++G C  G+I+ A      ++ K + LN V+Y  
Sbjct: 105 LNYAFSILGKILKLGYQPNTVTLTTLINGLCLNGQIRKALYFHDHVIAKGFHLNHVSYGI 164

Query: 378 MINGLCK 398
           +INGLCK
Sbjct: 165 LINGLCK 171



 Score = 73.2 bits (178), Expect = 2e-12
 Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
 Frame = +3

Query: 15  EMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKSH 194
           +M  K + P+ VT S LI   C L +L  A+ ++ ++       N +T  +L++ LC + 
Sbjct: 79  QMELKGIQPNIVTLSILINSFCHLNQLNYAFSILGKILKLGYQPNTVTLTTLINGLCLNG 138

Query: 195 QVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQ---DLLIKDYTLNVV 365
           Q+ KA+     +  +G H +  +Y IL++G CK G  K A  + +    LL+K    +VV
Sbjct: 139 QIRKALYFHDHVIAKGFHLNHVSYGILINGLCKSGETKAALQLLEKIKGLLVKP---DVV 195

Query: 366 AYNAMINGLCKESL 407
            YN +I+ LCK+ L
Sbjct: 196 MYNTIIDALCKDKL 209



 Score = 67.8 bits (164), Expect = 2e-10
 Identities = 31/113 (27%), Positives = 64/113 (56%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L +++  + + P+  TY+ L+ GLCK GRL  A ++  ++  +  P N+  YN +++  C
Sbjct: 426 LLKKIKDQGIQPNMYTYTILVDGLCKNGRLEDAQEIYHDLLTKGYPLNVSMYNVMVNEFC 485

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIK 344
           K    D+A++LL K++D G  P+  TY  L+    +  +   A  + ++++++
Sbjct: 486 KEGLFDEALSLLSKMEDNGCTPNAITYQTLICALFENNKNDKAVKLLREMIVR 538


>dbj|GAU10557.1| hypothetical protein TSUD_419530 [Trifolium subterraneum]
          Length = 202

 Score =  184 bits (467), Expect = 1e-56
 Identities = 87/135 (64%), Positives = 110/135 (81%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           NLF+EMH KSM+P+T TY++LI GLCK GR++  W L++EM+DR QPAN+ITY+S+LDAL
Sbjct: 16  NLFKEMHLKSMIPNTATYNSLIDGLCKSGRISDVWDLLDEMHDRGQPANVITYSSILDAL 75

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
            K+HQVDKAI LL KIKD+GI  D++TYT LVDG CK GRIKDA  ++Q+LLIK Y  +V
Sbjct: 76  FKNHQVDKAIELLAKIKDQGIQLDLYTYTTLVDGLCKNGRIKDALAVYQELLIKGYHFDV 135

Query: 363 VAYNAMINGLCKESL 407
             Y+ MI+GLCKE L
Sbjct: 136 TMYSVMIDGLCKEGL 150



 Score = 67.8 bits (164), Expect = 4e-11
 Identities = 33/113 (29%), Positives = 64/113 (56%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L  ++  + +  D  TY+ L+ GLCK GR+  A  + +E+  +    ++  Y+ ++D LC
Sbjct: 87  LLAKIKDQGIQLDLYTYTTLVDGLCKNGRIKDALAVYQELLIKGYHFDVTMYSVMIDGLC 146

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIK 344
           K   VD+A++L  K++D G +P+  TYT L+    K G  + A  + ++++ +
Sbjct: 147 KEGLVDEALSLKSKMEDNGCNPNCITYTTLIHALSKNGMNEKAVKLHREMIAR 199


>dbj|GAU38663.1| hypothetical protein TSUD_292450 [Trifolium subterraneum]
          Length = 781

 Score =  196 bits (499), Expect = 3e-56
 Identities = 91/136 (66%), Positives = 112/136 (82%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           NLF+EM SK++VP T+TYS LI GLCK GR++ AWKL++EM+DR QPAN+ITYNSL+ AL
Sbjct: 210 NLFKEMQSKNIVPSTITYSTLIDGLCKSGRISRAWKLLDEMHDRGQPANVITYNSLMQAL 269

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK+H VDK IAL+ KIKD+GI PD++TY +L+DG CK GR+KDAQ +FQDLLIK Y + V
Sbjct: 270 CKNHHVDKVIALVKKIKDQGIQPDMYTYNMLIDGLCKEGRLKDAQGMFQDLLIKGYNVTV 329

Query: 363 VAYNAMINGLCKESLF 410
             YN MINGLC E LF
Sbjct: 330 WTYNIMINGLCLEGLF 345



 Score = 93.6 bits (231), Expect = 2e-19
 Identities = 43/131 (32%), Positives = 79/131 (60%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           LF EM  K++ P   T++ L+   CK G +  A  ++  M       +++TYN+L+D  C
Sbjct: 513 LFHEMVLKNINPSVYTFNILVDAFCKKGIVKEAINVLAMMIKEGVKPDVVTYNALMDGYC 572

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVV 365
             +QV+KA  +   + D+G+ P+V +Y+I+++  CK+  + DA  +F+++  K  T + +
Sbjct: 573 LVNQVNKAFDIFNTMADKGVTPNVRSYSIIINRLCKIKMVDDAMNLFEEMKSKKITPDTI 632

Query: 366 AYNAMINGLCK 398
            YN++I+GLCK
Sbjct: 633 TYNSLIDGLCK 643



 Score = 89.0 bits (219), Expect = 7e-18
 Identities = 42/139 (30%), Positives = 82/139 (58%), Gaps = 7/139 (5%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCK-------LGRLTCAWKLIEEMNDRDQPANIITY 161
           +L+ EM  K + P+ VTY+ LIYG C        +G++  A  ++  M  +    +++TY
Sbjct: 98  DLYSEMIGKGIFPNDVTYNALIYGYCMVSQFKDAIGKMKEAKNVLAVMVKQRVEIDVVTY 157

Query: 162 NSLLDALCKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLI 341
            SL+D     ++V+KA  +   +  RG+ P+V+ Y+++++G CK+  I +A  +F+++  
Sbjct: 158 TSLMDGYVLVNEVNKAKVIFNTMAQRGVVPNVYCYSVMINGLCKIKMIDEAVNLFKEMQS 217

Query: 342 KDYTLNVVAYNAMINGLCK 398
           K+   + + Y+ +I+GLCK
Sbjct: 218 KNIVPSTITYSTLIDGLCK 236



 Score = 85.9 bits (211), Expect = 9e-17
 Identities = 45/92 (48%), Positives = 61/92 (66%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           NLFEEM SK + PDT+TY++LI GLCKLGR++ A +L++EM+DR Q AN +         
Sbjct: 617 NLFEEMKSKKITPDTITYNSLIDGLCKLGRISHALELVDEMHDRGQRANGL--------- 667

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILV 278
                 D+A+ALL K+KD G  PD  TY I++
Sbjct: 668 -----FDEAMALLSKMKDNGCIPDAVTYEIII 694



 Score = 81.3 bits (199), Expect = 4e-15
 Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L   +  K + PD V YS +I  LCK  R+  A+ L  EM  +    N +TYN+L+   C
Sbjct: 64  LLRRIEGKLVRPDVVMYSTIIDSLCKDKRVVDAYDLYSEMIGKGIFPNDVTYNALIYGYC 123

Query: 186 KSHQVDKAIALLMKIKD-------RGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIK 344
              Q   AI  + + K+       + +  DV TYT L+DG+  V  +  A++IF  +  +
Sbjct: 124 MVSQFKDAIGKMKEAKNVLAVMVKQRVEIDVVTYTSLMDGYVLVNEVNKAKVIFNTMAQR 183

Query: 345 DYTLNVVAYNAMINGLCK 398
               NV  Y+ MINGLCK
Sbjct: 184 GVVPNVYCYSVMINGLCK 201



 Score = 80.9 bits (198), Expect = 5e-15
 Identities = 39/132 (29%), Positives = 70/132 (53%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           N+   M  + +  D VTY++L+ G   +  +  A  +   M  R    N+  Y+ +++ L
Sbjct: 140 NVLAVMVKQRVEIDVVTYTSLMDGYVLVNEVNKAKVIFNTMAQRGVVPNVYCYSVMINGL 199

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK   +D+A+ L  +++ + I P   TY+ L+DG CK GRI  A  +  ++  +    NV
Sbjct: 200 CKIKMIDEAVNLFKEMQSKNIVPSTITYSTLIDGLCKSGRISRAWKLLDEMHDRGQPANV 259

Query: 363 VAYNAMINGLCK 398
           + YN+++  LCK
Sbjct: 260 ITYNSLMQALCK 271



 Score = 78.2 bits (191), Expect = 4e-14
 Identities = 39/124 (31%), Positives = 68/124 (54%)
 Frame = +3

Query: 39  PDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKSHQVDKAIAL 218
           PDT+T + L+ G+C  G +  A    +++       +  +Y  L++ LCK  ++  A+ L
Sbjct: 5   PDTITLNTLVKGMCLKGEVRKALHFHDKVVAEGFHLDQFSYGILMNGLCKMGEISAAMEL 64

Query: 219 LMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAYNAMINGLCK 398
           L +I+ + + PDV  Y+ ++D  CK  R+ DA  ++ +++ K    N V YNA+I G C 
Sbjct: 65  LRRIEGKLVRPDVVMYSTIIDSLCKDKRVVDAYDLYSEMIGKGIFPNDVTYNALIYGYCM 124

Query: 399 ESLF 410
            S F
Sbjct: 125 VSQF 128



 Score = 77.8 bits (190), Expect = 6e-14
 Identities = 37/111 (33%), Positives = 63/111 (56%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           N+   M  + + PD VTY+ L+ G C + ++  A+ +   M D+    N+ +Y+ +++ L
Sbjct: 547 NVLAMMIKEGVKPDVVTYNALMDGYCLVNQVNKAFDIFNTMADKGVTPNVRSYSIIINRL 606

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDL 335
           CK   VD A+ L  ++K + I PD  TY  L+DG CK+GRI  A  +  ++
Sbjct: 607 CKIKMVDDAMNLFEEMKSKKITPDTITYNSLIDGLCKLGRISHALELVDEM 657



 Score = 66.6 bits (161), Expect = 5e-10
 Identities = 34/113 (30%), Positives = 63/113 (55%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L +++  + + PD  TY+ LI GLCK GRL  A  + +++  +     + TYN +++ LC
Sbjct: 281 LVKKIKDQGIQPDMYTYNMLIDGLCKEGRLKDAQGMFQDLLIKGYNVTVWTYNIMINGLC 340

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIK 344
                D+A+ALL K++D G  PDV TY  ++    +      A+ + ++++ +
Sbjct: 341 LEGLFDEAMALLSKMEDNGCIPDVVTYQTIIYTLFENNENDHAEKLLREMIAR 393


>ref|XP_013452896.1| pentatricopeptide (PPR) repeat protein [Medicago truncatula]
 gb|KEH26924.1| pentatricopeptide (PPR) repeat protein [Medicago truncatula]
          Length = 409

 Score =  189 bits (480), Expect = 4e-56
 Identities = 87/136 (63%), Positives = 111/136 (81%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           NLF++MHS++M PDT++Y++LI GLCK G ++  W LI+EM++R QP N+ITYNSLLDAL
Sbjct: 223 NLFKDMHSRNMTPDTISYNSLIDGLCKSGSISDVWDLIDEMHNRCQPVNVITYNSLLDAL 282

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK+HQVDKAIALL K+KD+GI P+++TYTILVDG CK GR+ DA+ I+ DLL K Y LNV
Sbjct: 283 CKNHQVDKAIALLKKMKDQGIQPNMYTYTILVDGLCKNGRLADAREIYHDLLTKGYPLNV 342

Query: 363 VAYNAMINGLCKESLF 410
             YN M+N  CKE LF
Sbjct: 343 SMYNVMVNEFCKEGLF 358



 Score = 75.1 bits (183), Expect = 4e-13
 Identities = 46/123 (37%), Positives = 71/123 (57%)
 Frame = +3

Query: 39  PDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKSHQVDKAIAL 218
           PDTVT + LI GLC+ G++     L++         N++ Y++++D+LCK    DK    
Sbjct: 111 PDTVTLTTLIKGLCRSGQIEGL--LVKP--------NVVMYSTIIDSLCK----DKLSGA 156

Query: 219 LMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAYNAMINGLCK 398
           +M IK +G+ P+V TYT L+DG+  V  +  A  IF  +  +  T  + +YN MINGLCK
Sbjct: 157 VM-IK-QGVEPNVVTYTSLMDGYFLVKEVNKATYIFNTIAQRGVTPELHSYNVMINGLCK 214

Query: 399 ESL 407
             +
Sbjct: 215 NKM 217



 Score = 75.1 bits (183), Expect = 4e-13
 Identities = 36/127 (28%), Positives = 68/127 (53%)
 Frame = +3

Query: 18  MHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKSHQ 197
           M  + + P+ VTY++L+ G   +  +  A  +   +  R     + +YN +++ LCK+  
Sbjct: 158 MIKQGVEPNVVTYTSLMDGYFLVKEVNKATYIFNTIAQRGVTPELHSYNVMINGLCKNKM 217

Query: 198 VDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAYNA 377
           V++A  L   +  R + PD  +Y  L+DG CK G I D   +  ++  +   +NV+ YN+
Sbjct: 218 VNEAANLFKDMHSRNMTPDTISYNSLIDGLCKSGSISDVWDLIDEMHNRCQPVNVITYNS 277

Query: 378 MINGLCK 398
           +++ LCK
Sbjct: 278 LLDALCK 284



 Score = 71.2 bits (173), Expect = 1e-11
 Identities = 33/113 (29%), Positives = 64/113 (56%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L ++M  + + P+  TY+ L+ GLCK GRL  A ++  ++  +  P N+  YN +++  C
Sbjct: 294 LLKKMKDQGIQPNMYTYTILVDGLCKNGRLADAREIYHDLLTKGYPLNVSMYNVMVNEFC 353

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIK 344
           K    D+A++LL K++D G  PD  TY  L+    +  +   A  + ++++++
Sbjct: 354 KEGLFDEALSLLSKMEDNGCTPDAITYQTLICALFENNKNDKAVKLLREMIVR 406



 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 38/133 (28%), Positives = 63/133 (47%)
 Frame = +3

Query: 9   FEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCK 188
           F  M +  + P    +  ++  L K+        L   +  R    +I+  N L++  C+
Sbjct: 31  FNHMLNIKLTPPIFKFGKILGSLVKINHFHTVISLSRLIELRGIQTDIVNLNILVNCFCQ 90

Query: 189 SHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVA 368
             Q++ A ++L KI   G  PD  T T L+ G C+ G+I       + LL+K    NVV 
Sbjct: 91  LGQLNYAFSVLAKILKMGYQPDTVTLTTLIKGLCRSGQI-------EGLLVKP---NVVM 140

Query: 369 YNAMINGLCKESL 407
           Y+ +I+ LCK+ L
Sbjct: 141 YSTIIDSLCKDKL 153


>ref|XP_013452440.1| pentatricopeptide (PPR) repeat protein [Medicago truncatula]
 gb|KEH26468.1| pentatricopeptide (PPR) repeat protein [Medicago truncatula]
          Length = 411

 Score =  189 bits (479), Expect = 6e-56
 Identities = 91/136 (66%), Positives = 110/136 (80%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           NLF+EMH K+M PD VTY++LI GL K GR++ AW L+ EM++R QPA++ITYNSLLDAL
Sbjct: 225 NLFKEMHLKNMAPDIVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYNSLLDAL 284

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK+HQVD AI L  KIKD+GI P ++TYTILVDG CK GR+KDAQ ++Q LLIK Y L+V
Sbjct: 285 CKNHQVDMAITLFTKIKDQGIQPYIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDV 344

Query: 363 VAYNAMINGLCKESLF 410
             Y  MINGLCKESLF
Sbjct: 345 RMYTVMINGLCKESLF 360



 Score =  101 bits (252), Expect = 1e-22
 Identities = 49/135 (36%), Positives = 83/135 (61%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           +L+ EM +  + P+ VTY+ LIYG C +G++  A  L+ EM  ++   N++T+N+L+D L
Sbjct: 85  DLYSEMVAMRIFPNVVTYNTLIYGFCIVGQMKQAIDLLNEMLLKNISPNVVTFNTLVDGL 144

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK  ++ KA  +L  +  +G+  +V TY+ L+DG+  V  +  A  +F  ++ +  T NV
Sbjct: 145 CKEGEMKKARKVLAFMIKQGVELNVVTYSFLMDGYFLVKEVNKATFVFNTMVRRGVTSNV 204

Query: 363 VAYNAMINGLCKESL 407
            +Y  MINGLCK  +
Sbjct: 205 HSYTVMINGLCKNKM 219



 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 43/130 (33%), Positives = 77/130 (59%)
 Frame = +3

Query: 12  EEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKS 191
           +++ +K    + V+Y  LI GLCK G    A +++  ++      N++ Y++++ +LCK 
Sbjct: 18  DDVIAKEFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKD 77

Query: 192 HQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAY 371
             V  A  L  ++    I P+V TY  L+ GFC VG++K A  +  ++L+K+ + NVV +
Sbjct: 78  KLVIDAFDLYSEMVAMRIFPNVVTYNTLIYGFCIVGQMKQAIDLLNEMLLKNISPNVVTF 137

Query: 372 NAMINGLCKE 401
           N +++GLCKE
Sbjct: 138 NTLVDGLCKE 147



 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 42/132 (31%), Positives = 81/132 (61%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           +L  EM  K++ P+ VT++ L+ GLCK G +  A K++  M  +    N++TY+ L+D  
Sbjct: 120 DLLNEMLLKNISPNVVTFNTLVDGLCKEGEMKKARKVLAFMIKQGVELNVVTYSFLMDGY 179

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
               +V+KA  +   +  RG+  +V +YT++++G CK   + +A  +F+++ +K+   ++
Sbjct: 180 FLVKEVNKATFVFNTMVRRGVTSNVHSYTVMINGLCKNKMVDEAVNLFKEMHLKNMAPDI 239

Query: 363 VAYNAMINGLCK 398
           V YN++I+GL K
Sbjct: 240 VTYNSLIDGLLK 251



 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 33/114 (28%), Positives = 62/114 (54%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           LF ++  + + P   TY+ L+ GLCK GRL  A ++ + +  +    ++  Y  +++ LC
Sbjct: 296 LFTKIKDQGIQPYIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDVRMYTVMINGLC 355

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKD 347
           K    DKA++LL K+KD G  P+  T+ IL+    +      A  + + ++++D
Sbjct: 356 KESLFDKALSLLSKMKDNGCTPNPVTFEILIRALFENDMNDKAVELLRKMIVRD 409


>dbj|GAU38661.1| hypothetical protein TSUD_292430 [Trifolium subterraneum]
          Length = 551

 Score =  192 bits (487), Expect = 7e-56
 Identities = 89/136 (65%), Positives = 114/136 (83%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           NLF+EM SKS+ PDT+TYS+LI GLCK GR++ AW+L+EEM+DR QPAN+ITY+S+L AL
Sbjct: 365 NLFKEMQSKSIAPDTITYSSLIDGLCKSGRISHAWELLEEMHDRGQPANVITYSSILHAL 424

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK+H  DKAIAL+ KIK++GI P+++TY+IL+DG CK GR+K+AQ IFQDLLIK Y+L V
Sbjct: 425 CKNHNADKAIALVKKIKNQGIQPNMYTYSILIDGLCKEGRLKNAQEIFQDLLIKGYSLTV 484

Query: 363 VAYNAMINGLCKESLF 410
             YN MI+G C E LF
Sbjct: 485 QTYNIMIHGFCLEGLF 500



 Score =  102 bits (253), Expect = 2e-22
 Identities = 55/136 (40%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMND-RDQPANIITYNSLLDA 179
           +L+ EM  K + PD VTY++LIYG C +G+L  A  L+ EM   R    ++  ++ LLDA
Sbjct: 224 DLYSEMIVKGVSPDVVTYTSLIYGFCIVGQLKEAIGLLNEMVVCRKLNGDVYIFSVLLDA 283

Query: 180 LCKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLN 359
           LCK   + +A  +L  +  +G+ PDV TYT L+DG+C +  +  A++IF  +  +    N
Sbjct: 284 LCKEGNLKQAKNVLAVMMKQGMEPDVVTYTSLMDGYCLINDVNKAKVIFNTMAQRGVIPN 343

Query: 360 VVAYNAMINGLCKESL 407
           V  YN +INGLCK  L
Sbjct: 344 VHCYNVLINGLCKIKL 359



 Score = 92.0 bits (227), Expect = 6e-19
 Identities = 44/132 (33%), Positives = 75/132 (56%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           N+   M  + M PD VTY++L+ G C +  +  A  +   M  R    N+  YN L++ L
Sbjct: 295 NVLAVMMKQGMEPDVVTYTSLMDGYCLINDVNKAKVIFNTMAQRGVIPNVHCYNVLINGL 354

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK   +D+A+ L  +++ + I PD  TY+ L+DG CK GRI  A  + +++  +    NV
Sbjct: 355 CKIKLIDEAMNLFKEMQSKSIAPDTITYSSLIDGLCKSGRISHAWELLEEMHDRGQPANV 414

Query: 363 VAYNAMINGLCK 398
           + Y+++++ LCK
Sbjct: 415 ITYSSILHALCK 426



 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 38/121 (31%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
 Frame = +3

Query: 42  DTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKSHQVDKAIALL 221
           D ++Y  LI GLCK+G    A +++  +  +    +++TY +++D LCK   +  A  L 
Sbjct: 167 DQISYGTLINGLCKIGETRAALQVLRRIEGKFVKPDVVTYTTIIDNLCKDKLIKDAYDLY 226

Query: 222 MKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLI-KDYTLNVVAYNAMINGLCK 398
            ++  +G+ PDV TYT L+ GFC VG++K+A  +  ++++ +    +V  ++ +++ LCK
Sbjct: 227 SEMIVKGVSPDVVTYTSLIYGFCIVGQLKEAIGLLNEMVVCRKLNGDVYIFSVLLDALCK 286

Query: 399 E 401
           E
Sbjct: 287 E 287



 Score = 70.9 bits (172), Expect = 1e-11
 Identities = 36/131 (27%), Positives = 65/131 (49%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L EEMH +    + +TYS++++ LCK      A  L++++ ++    N+ TY+ L+D LC
Sbjct: 401 LLEEMHDRGQPANVITYSSILHALCKNHNADKAIALVKKIKNQGIQPNMYTYSILIDGLC 460

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVV 365
           K  ++  A  +   +  +G    V TY I++ GFC  G   +A  +   +       + +
Sbjct: 461 KEGRLKNAQEIFQDLLIKGYSLTVQTYNIMIHGFCLEGLFDEAMTLLSKMEDNGCIPDAI 520

Query: 366 AYNAMINGLCK 398
            Y  +I  L K
Sbjct: 521 TYETIIRALFK 531



 Score = 67.8 bits (164), Expect = 2e-10
 Identities = 36/135 (26%), Positives = 68/135 (50%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           +L  ++    + PD  T S LI   C +G +  A+ ++ ++       ++IT  +L+  L
Sbjct: 84  SLSHQLEFNGIKPDVFTLSILINCYCHVGHINFAFSILAKILKLGYQPDVITLTTLIKGL 143

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           C + +V +A+     +   G H D  +Y  L++G CK+G  + A  + + +  K    +V
Sbjct: 144 CFNGKVKEALHFHDHVVAHGFHLDQISYGTLINGLCKIGETRAALQVLRRIEGKFVKPDV 203

Query: 363 VAYNAMINGLCKESL 407
           V Y  +I+ LCK+ L
Sbjct: 204 VTYTTIIDNLCKDKL 218



 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 31/117 (26%), Positives = 60/117 (51%)
 Frame = +3

Query: 48  VTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKSHQVDKAIALLMK 227
           +T++ ++  + K+     A  L  ++       ++ T + L++  C    ++ A ++L K
Sbjct: 64  LTFNKILTSIVKMKHYPTAISLSHQLEFNGIKPDVFTLSILINCYCHVGHINFAFSILAK 123

Query: 228 IKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAYNAMINGLCK 398
           I   G  PDV T T L+ G C  G++K+A      ++   + L+ ++Y  +INGLCK
Sbjct: 124 ILKLGYQPDVITLTTLIKGLCFNGKVKEALHFHDHVVAHGFHLDQISYGTLINGLCK 180



 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 32/113 (28%), Positives = 59/113 (52%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L +++ ++ + P+  TYS LI GLCK GRL  A ++ +++  +     + TYN ++   C
Sbjct: 436 LVKKIKNQGIQPNMYTYSILIDGLCKEGRLKNAQEIFQDLLIKGYSLTVQTYNIMIHGFC 495

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIK 344
                D+A+ LL K++D G  PD  TY  ++    K      A  +  +++ +
Sbjct: 496 LEGLFDEAMTLLSKMEDNGCIPDAITYETIIRALFKNDENDKALKLLHEMIAR 548



 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 30/82 (36%), Positives = 47/82 (57%)
 Frame = +3

Query: 150 IITYNSLLDALCKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQ 329
           I+T+N +L ++ K      AI+L  +++  GI PDVFT +IL++ +C VG I  A  I  
Sbjct: 63  ILTFNKILTSIVKMKHYPTAISLSHQLEFNGIKPDVFTLSILINCYCHVGHINFAFSILA 122

Query: 330 DLLIKDYTLNVVAYNAMINGLC 395
            +L   Y  +V+    +I GLC
Sbjct: 123 KILKLGYQPDVITLTTLIKGLC 144


>ref|XP_003600424.1| pentatricopeptide (PPR) repeat protein [Medicago truncatula]
 gb|AES70675.1| pentatricopeptide (PPR) repeat protein [Medicago truncatula]
          Length = 393

 Score =  188 bits (477), Expect = 7e-56
 Identities = 90/133 (67%), Positives = 107/133 (80%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           NLF+EMHSK+MVPDTV Y++LI GLCK  R+   W  I EM+DR QPANIITYNSLLD L
Sbjct: 214 NLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGL 273

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK+HQVDKAI LL KIK++GI P+++TYTILVDG CK GR++DAQ ++QDLL K Y L+ 
Sbjct: 274 CKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDA 333

Query: 363 VAYNAMINGLCKE 401
             Y  MINGLCKE
Sbjct: 334 RIYTVMINGLCKE 346



 Score = 91.7 bits (226), Expect = 4e-19
 Identities = 47/131 (35%), Positives = 80/131 (61%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L  +M SK++ P+  T++ L+ GLCK G +  A  ++  M  +    NI+TYNSL+D   
Sbjct: 110 LLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYF 169

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVV 365
              +V+KA  L   I  RG+ P+V +Y ++++G CK   + +A  +F+++  K+   + V
Sbjct: 170 LVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTV 229

Query: 366 AYNAMINGLCK 398
           AYN++I+GLCK
Sbjct: 230 AYNSLIDGLCK 240



 Score = 90.9 bits (224), Expect = 8e-19
 Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 14/149 (9%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCK--------------LGRLTCAWKLIEEMNDRDQ 140
           +L+ EM  K + PD VTY+ LIY L                LG++  A  L+ +M  +  
Sbjct: 60  DLYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTV 119

Query: 141 PANIITYNSLLDALCKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQM 320
             NI T+ +L+D LCK  +V KA  +L  +  + + P++ TY  L+DG+  V  +  A+ 
Sbjct: 120 TPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQ 179

Query: 321 IFQDLLIKDYTLNVVAYNAMINGLCKESL 407
           +F  + ++  T NV +Y  MINGLCK  +
Sbjct: 180 LFNTISLRGMTPNVRSYKVMINGLCKNKM 208



 Score = 67.0 bits (162), Expect = 3e-10
 Identities = 38/131 (29%), Positives = 70/131 (53%), Gaps = 14/131 (10%)
 Frame = +3

Query: 39  PDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCK---------- 188
           PD V Y+ +I  LCK   ++    L  EM D+    +++TYN+L+ +L            
Sbjct: 37  PDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEY 96

Query: 189 ----SHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTL 356
                 Q+ +A+ LL ++  + + P++ T+T LVDG CK G +K A+ +   ++ +    
Sbjct: 97  GFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEP 156

Query: 357 NVVAYNAMING 389
           N+V YN++++G
Sbjct: 157 NIVTYNSLMDG 167



 Score = 57.0 bits (136), Expect = 9e-07
 Identities = 28/91 (30%), Positives = 54/91 (59%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L  ++ ++ + P+  TY+ L+ GLCK GRL  A ++ +++ ++    +   Y  +++ LC
Sbjct: 285 LLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLC 344

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILV 278
           K   +D+A++LL K++D    PD  TY I +
Sbjct: 345 KEGFLDEALSLLSKMEDNKCTPDGVTYEITI 375



 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 14/99 (14%)
 Frame = +3

Query: 147 NIITYNSLLDALCKSHQVDKAIALLMKIKDRGIHPDVFTYTILV--------------DG 284
           +++ YN+++D LCK   V     L  ++ D+ I+PDV TY  L+               G
Sbjct: 38  DVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYG 97

Query: 285 FCKVGRIKDAQMIFQDLLIKDYTLNVVAYNAMINGLCKE 401
           F  +G++K+A  +   +  K  T N+  +  +++GLCK+
Sbjct: 98  FSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKD 136


>gb|PNX95522.1| pentatricopeptide (PPR) repeat protein [Trifolium pratense]
          Length = 429

 Score =  189 bits (479), Expect = 9e-56
 Identities = 86/135 (63%), Positives = 113/135 (83%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           LF EM +K ++PDT+TY++LI GLCKLGR++ AWKL+++M+DR Q A++ITYNSLL ALC
Sbjct: 161 LFIEMQTKKLIPDTITYTSLIDGLCKLGRISHAWKLLDQMHDRGQFADVITYNSLLHALC 220

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVV 365
           K+H VD AIAL+ K+KD GI PD +TYTIL+DG CK G++K+A+ +FQDLLIK Y+L++ 
Sbjct: 221 KNHYVDNAIALVKKLKDHGIQPDTYTYTILIDGLCKRGQLKNARDVFQDLLIKGYSLDIR 280

Query: 366 AYNAMINGLCKESLF 410
            YN MINGLCKE LF
Sbjct: 281 TYNVMINGLCKEGLF 295



 Score = 99.4 bits (246), Expect = 9e-22
 Identities = 51/132 (38%), Positives = 79/132 (59%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           +L+ EM +K + PD  TY+ LI+G C +G+L  A   + EM  R   A++  +N  +D L
Sbjct: 20  DLYFEMIAKKVSPDVFTYTALIHGFCIVGQLKEAIGFLNEMVLRKINADVFIFNIFVDDL 79

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK  +V  A  +L  +  +G+ PDV TYT L+DG+C +  +  A++IF  ++ +    +V
Sbjct: 80  CKEGKVKAAKNVLAVMIKQGVQPDVVTYTSLMDGYCLINEVNKAKVIFNTMVQRGVIPDV 139

Query: 363 VAYNAMINGLCK 398
             YN MINGLCK
Sbjct: 140 HCYNVMINGLCK 151



 Score = 88.2 bits (217), Expect = 9e-18
 Identities = 41/132 (31%), Positives = 75/132 (56%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           N+   M  + + PD VTY++L+ G C +  +  A  +   M  R    ++  YN +++ L
Sbjct: 90  NVLAVMIKQGVQPDVVTYTSLMDGYCLINEVNKAKVIFNTMVQRGVIPDVHCYNVMINGL 149

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK   +D+A+ L ++++ + + PD  TYT L+DG CK+GRI  A  +   +  +    +V
Sbjct: 150 CKIKMMDEAMKLFIEMQTKKLIPDTITYTSLIDGLCKLGRISHAWKLLDQMHDRGQFADV 209

Query: 363 VAYNAMINGLCK 398
           + YN++++ LCK
Sbjct: 210 ITYNSLLHALCK 221



 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 28/81 (34%), Positives = 49/81 (60%)
 Frame = +3

Query: 159 YNSLLDALCKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLL 338
           Y +++D LCK   +  A  L  ++  + + PDVFTYT L+ GFC VG++K+A     +++
Sbjct: 2   YTTIIDNLCKDKLIIDARDLYFEMIAKKVSPDVFTYTALIHGFCIVGQLKEAIGFLNEMV 61

Query: 339 IKDYTLNVVAYNAMINGLCKE 401
           ++    +V  +N  ++ LCKE
Sbjct: 62  LRKINADVFIFNIFVDDLCKE 82



 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 35/114 (30%), Positives = 61/114 (53%)
 Frame = +3

Query: 54  YSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKSHQVDKAIALLMKIK 233
           Y+ +I  LCK   +  A  L  EM  +    ++ TY +L+   C   Q+ +AI  L ++ 
Sbjct: 2   YTTIIDNLCKDKLIIDARDLYFEMIAKKVSPDVFTYTALIHGFCIVGQLKEAIGFLNEMV 61

Query: 234 DRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAYNAMINGLC 395
            R I+ DVF + I VD  CK G++K A+ +   ++ +    +VV Y ++++G C
Sbjct: 62  LRKINADVFIFNIFVDDLCKEGKVKAAKNVLAVMIKQGVQPDVVTYTSLMDGYC 115


>ref|XP_013442685.1| pentatricopeptide (PPR) repeat protein [Medicago truncatula]
 gb|KEH16710.1| pentatricopeptide (PPR) repeat protein [Medicago truncatula]
          Length = 542

 Score =  189 bits (480), Expect = 6e-55
 Identities = 90/136 (66%), Positives = 111/136 (81%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           NLF+EMHSK+MVP+TVTY++LI GLCKLGR++ AW  I+EM+DR QPANIITY+SLLD L
Sbjct: 356 NLFKEMHSKNMVPNTVTYNSLIDGLCKLGRMSDAWDFIDEMHDRGQPANIITYSSLLDGL 415

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK+HQVDKAI LL KIK++GI  D++TYTILVDG CK G+++DAQ ++Q LL   Y L+ 
Sbjct: 416 CKNHQVDKAITLLTKIKNQGIQLDIYTYTILVDGLCKNGKLRDAQEVYQVLLNNTYHLDA 475

Query: 363 VAYNAMINGLCKESLF 410
             Y  MINGLCKE  F
Sbjct: 476 RIYTVMINGLCKEGFF 491



 Score = 95.1 bits (235), Expect = 4e-20
 Identities = 47/135 (34%), Positives = 78/135 (57%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           +L+ EM  K + PD +TY+ LIYG   LG++  A  L+  M  ++   N+ T++ L+D L
Sbjct: 216 DLYSEMIVKKIYPDAITYNTLIYGFSILGQMKEAVGLLNRMTLKNVNPNVYTFSILIDVL 275

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK  +V KA  +L  +  +G+ P++ TY+ L+DG   V  +  A  +F  +  +   L+V
Sbjct: 276 CKDGEVKKARNVLAVMIKQGVEPNIATYSSLMDGCFSVKEVNKATYVFNTIARRGVALDV 335

Query: 363 VAYNAMINGLCKESL 407
            +Y+ MING CK  +
Sbjct: 336 QSYSVMINGFCKNKM 350



 Score = 77.8 bits (190), Expect = 5e-14
 Identities = 35/132 (26%), Positives = 73/132 (55%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           N+   M  + + P+  TYS+L+ G   +  +  A  +   +  R    ++ +Y+ +++  
Sbjct: 286 NVLAVMIKQGVEPNIATYSSLMDGCFSVKEVNKATYVFNTIARRGVALDVQSYSVMINGF 345

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK+  VD+A+ L  ++  + + P+  TY  L+DG CK+GR+ DA     ++  +    N+
Sbjct: 346 CKNKMVDEAVNLFKEMHSKNMVPNTVTYNSLIDGLCKLGRMSDAWDFIDEMHDRGQPANI 405

Query: 363 VAYNAMINGLCK 398
           + Y+++++GLCK
Sbjct: 406 ITYSSLLDGLCK 417



 Score = 77.0 bits (188), Expect = 1e-13
 Identities = 38/127 (29%), Positives = 65/127 (51%)
 Frame = +3

Query: 18  MHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKSHQ 197
           +H K+  P    ++ ++  L KL     A    ++M  +    +I T + L++  C  +Q
Sbjct: 46  LHMKNPTPPIFEFNKILSSLAKLNHFNIAISFSQQMELKPIQPDIFTLSILINCFCHLNQ 105

Query: 198 VDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAYNA 377
           ++ A ++L KI   G  P+  T T L+ G C  G ++ A     D++ K + LN V+Y  
Sbjct: 106 LNYAFSILGKILKLGYEPNTVTLTTLIKGLCLNGEVRKALYFHNDVIAKGFYLNEVSYGT 165

Query: 378 MINGLCK 398
           +INGLCK
Sbjct: 166 LINGLCK 172



 Score = 77.0 bits (188), Expect = 1e-13
 Identities = 38/126 (30%), Positives = 69/126 (54%)
 Frame = +3

Query: 24  SKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKSHQVD 203
           +K    + V+Y  LI GLCK G    A  L+ ++       +++ YN+++D+LCK   V 
Sbjct: 153 AKGFYLNEVSYGTLINGLCKSGETKAALSLLRKIEGSLVKPDVVMYNTIIDSLCKDKLVS 212

Query: 204 KAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAYNAMI 383
               L  ++  + I+PD  TY  L+ GF  +G++K+A  +   + +K+   NV  ++ +I
Sbjct: 213 DGYDLYSEMIVKKIYPDAITYNTLIYGFSILGQMKEAVGLLNRMTLKNVNPNVYTFSILI 272

Query: 384 NGLCKE 401
           + LCK+
Sbjct: 273 DVLCKD 278



 Score = 73.6 bits (179), Expect = 2e-12
 Identities = 36/117 (30%), Positives = 64/117 (54%)
 Frame = +3

Query: 39  PDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKSHQVDKAIAL 218
           P+TVT + LI GLC  G +  A     ++  +    N ++Y +L++ LCKS +   A++L
Sbjct: 123 PNTVTLTTLIKGLCLNGEVRKALYFHNDVIAKGFYLNEVSYGTLINGLCKSGETKAALSL 182

Query: 219 LMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAYNAMING 389
           L KI+   + PDV  Y  ++D  CK   + D   ++ ++++K    + + YN +I G
Sbjct: 183 LRKIEGSLVKPDVVMYNTIIDSLCKDKLVSDGYDLYSEMIVKKIYPDAITYNTLIYG 239



 Score = 70.5 bits (171), Expect = 2e-11
 Identities = 35/129 (27%), Positives = 73/129 (56%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           +L  ++    + PD V Y+ +I  LCK   ++  + L  EM  +    + ITYN+L+   
Sbjct: 181 SLLRKIEGSLVKPDVVMYNTIIDSLCKDKLVSDGYDLYSEMIVKKIYPDAITYNTLIYGF 240

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
               Q+ +A+ LL ++  + ++P+V+T++IL+D  CK G +K A+ +   ++ +    N+
Sbjct: 241 SILGQMKEAVGLLNRMTLKNVNPNVYTFSILIDVLCKDGEVKKARNVLAVMIKQGVEPNI 300

Query: 363 VAYNAMING 389
             Y+++++G
Sbjct: 301 ATYSSLMDG 309



 Score = 66.2 bits (160), Expect = 6e-10
 Identities = 38/132 (28%), Positives = 67/132 (50%)
 Frame = +3

Query: 12  EEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKS 191
           ++M  K + PD  T S LI   C L +L  A+ ++ ++       N +T  +L+  LC +
Sbjct: 79  QQMELKPIQPDIFTLSILINCFCHLNQLNYAFSILGKILKLGYEPNTVTLTTLIKGLCLN 138

Query: 192 HQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAY 371
            +V KA+     +  +G + +  +Y  L++G CK G  K A  + + +       +VV Y
Sbjct: 139 GEVRKALYFHNDVIAKGFYLNEVSYGTLINGLCKSGETKAALSLLRKIEGSLVKPDVVMY 198

Query: 372 NAMINGLCKESL 407
           N +I+ LCK+ L
Sbjct: 199 NTIIDSLCKDKL 210



 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 30/113 (26%), Positives = 61/113 (53%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L  ++ ++ +  D  TY+ L+ GLCK G+L  A ++ + + +     +   Y  +++ LC
Sbjct: 427 LLTKIKNQGIQLDIYTYTILVDGLCKNGKLRDAQEVYQVLLNNTYHLDARIYTVMINGLC 486

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIK 344
           K    D+A++LL K++D G  PD  TY I++    +  R   A  + ++++ +
Sbjct: 487 KEGFFDEALSLLSKMEDNGCTPDGVTYEIIIRALFENNRNDKAVKLIREMIAR 539


>gb|PNX85956.1| pentatricopeptide repeat-containing protein mitochondrial-like
           [Trifolium pratense]
          Length = 332

 Score =  182 bits (463), Expect = 2e-54
 Identities = 88/135 (65%), Positives = 108/135 (80%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           NLF+EMH K+M P+TVTYS+LI GLCK GR+   W  ++EM+ R QPA+IITY+SLLDAL
Sbjct: 146 NLFKEMHLKNMAPNTVTYSSLIDGLCKSGRIYDVWDFMDEMHYRGQPADIITYSSLLDAL 205

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK+  VDKAI LL KIKD+GI P++ TYTILVDG CK GR+KDAQ ++QDLLI  Y L+V
Sbjct: 206 CKNGDVDKAIELLKKIKDKGIQPNMCTYTILVDGLCKNGRLKDAQKVYQDLLINGYHLDV 265

Query: 363 VAYNAMINGLCKESL 407
             YN M+NG+CKE L
Sbjct: 266 RMYNVMVNGMCKEGL 280



 Score = 90.1 bits (222), Expect = 9e-19
 Identities = 46/135 (34%), Positives = 79/135 (58%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           +L+ EM +K + P+ VTY+ LIYG C  G+L  A  L  EM  ++   ++ T+N L+D L
Sbjct: 6   DLYSEMVAKKVFPNVVTYNTLIYGFCIAGQLKEAVGLFNEMILKNTNPDVYTFNILVDGL 65

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK  ++ KA  +L  +  +G+ P++ TY  L+ G+  V ++  A+ +F  +       ++
Sbjct: 66  CKEGEMRKAKNVLAVMIKQGVKPNIVTYNSLMHGYFLVKKVNMAKYVFNAIARTGVKPDL 125

Query: 363 VAYNAMINGLCKESL 407
            +Y+ MINGLCK  +
Sbjct: 126 QSYSIMINGLCKNKM 140



 Score = 87.8 bits (216), Expect = 6e-18
 Identities = 45/131 (34%), Positives = 77/131 (58%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           LF EM  K+  PD  T++ L+ GLCK G +  A  ++  M  +    NI+TYNSL+    
Sbjct: 42  LFNEMILKNTNPDVYTFNILVDGLCKEGEMRKAKNVLAVMIKQGVKPNIVTYNSLMHGYF 101

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVV 365
              +V+ A  +   I   G+ PD+ +Y+I+++G CK   + +A  +F+++ +K+   N V
Sbjct: 102 LVKKVNMAKYVFNAIARTGVKPDLQSYSIMINGLCKNKMVDEAVNLFKEMHLKNMAPNTV 161

Query: 366 AYNAMINGLCK 398
            Y+++I+GLCK
Sbjct: 162 TYSSLIDGLCK 172



 Score = 68.2 bits (165), Expect = 9e-11
 Identities = 31/96 (32%), Positives = 59/96 (61%)
 Frame = +3

Query: 102 AWKLIEEMNDRDQPANIITYNSLLDALCKSHQVDKAIALLMKIKDRGIHPDVFTYTILVD 281
           A+ L  EM  +    N++TYN+L+   C + Q+ +A+ L  ++  +  +PDV+T+ ILVD
Sbjct: 4   AYDLYSEMVAKKVFPNVVTYNTLIYGFCIAGQLKEAVGLFNEMILKNTNPDVYTFNILVD 63

Query: 282 GFCKVGRIKDAQMIFQDLLIKDYTLNVVAYNAMING 389
           G CK G ++ A+ +   ++ +    N+V YN++++G
Sbjct: 64  GLCKEGEMRKAKNVLAVMIKQGVKPNIVTYNSLMHG 99



 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 29/113 (25%), Positives = 64/113 (56%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L +++  K + P+  TY+ L+ GLCK GRL  A K+ +++       ++  YN +++ +C
Sbjct: 217 LLKKIKDKGIQPNMCTYTILVDGLCKNGRLKDAQKVYQDLLINGYHLDVRMYNVMVNGMC 276

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIK 344
           K   +D+A+++L K+++    P+  TY  L+    + G+   A  + ++++ +
Sbjct: 277 KEGLLDEALSILSKMEENSCTPNAVTYEPLIHALFRNGKNDKAIKLVREMIAR 329


>ref|XP_013452880.1| pentatricopeptide (PPR) repeat protein [Medicago truncatula]
 gb|KEH26908.1| pentatricopeptide (PPR) repeat protein [Medicago truncatula]
          Length = 389

 Score =  184 bits (466), Expect = 3e-54
 Identities = 83/136 (61%), Positives = 110/136 (80%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           NLFEEMH + ++PD VTY++LI GLCK G+++ A KL++EM+DR QP +IITY+SLLDAL
Sbjct: 203 NLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDAL 262

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK+HQVDKAIALL  +KD+GI P+++TYTIL+DG CK GR++DA  IF+DLL+K Y + V
Sbjct: 263 CKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITV 322

Query: 363 VAYNAMINGLCKESLF 410
             Y  MI+G C + LF
Sbjct: 323 NTYTVMIHGFCNKGLF 338



 Score =  106 bits (265), Expect = 1e-24
 Identities = 52/132 (39%), Positives = 80/132 (60%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           +L+ EM SK + PD  TY+ LI G C +G+L  A  L  +M  ++    + T+N L+DA 
Sbjct: 63  DLYSEMASKRIFPDVFTYNALISGFCIVGKLKDATDLFNKMTSKNINPTVYTFNILVDAF 122

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK   V +A  +L  +  +GI+P+  TY+ L+DG+C V  + +A+ IF  + ++  T NV
Sbjct: 123 CKEGNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANV 182

Query: 363 VAYNAMINGLCK 398
            +YN MING CK
Sbjct: 183 WSYNIMINGFCK 194



 Score = 96.3 bits (238), Expect = 8e-21
 Identities = 43/120 (35%), Positives = 70/120 (58%)
 Frame = +3

Query: 42  DTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALCKSHQVDKAIALL 221
           D V Y  LI GLCK+G    A +L+  ++ +    +++ YN+++D +CK   V+ A  L 
Sbjct: 6   DKVGYGTLINGLCKVGETKAALELLRRVDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLY 65

Query: 222 MKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVVAYNAMINGLCKE 401
            ++  + I PDVFTY  L+ GFC VG++KDA  +F  +  K+    V  +N +++  CKE
Sbjct: 66  SEMASKRIFPDVFTYNALISGFCIVGKLKDATDLFNKMTSKNINPTVYTFNILVDAFCKE 125



 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 41/130 (31%), Positives = 72/130 (55%)
 Frame = +3

Query: 6   LFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDALC 185
           L   +  K + PD V Y+ +I G+CK   +  A+ L  EM  +    ++ TYN+L+   C
Sbjct: 29  LLRRVDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEMASKRIFPDVFTYNALISGFC 88

Query: 186 KSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNVV 365
              ++  A  L  K+  + I+P V+T+ ILVD FCK G +K+A+ +   ++ +    N V
Sbjct: 89  IVGKLKDATDLFNKMTSKNINPTVYTFNILVDAFCKEGNVKEAKNVLAMMMKQGINPNAV 148

Query: 366 AYNAMINGLC 395
            Y+++++G C
Sbjct: 149 TYSSLMDGYC 158



 Score = 80.5 bits (197), Expect = 5e-15
 Identities = 39/132 (29%), Positives = 74/132 (56%)
 Frame = +3

Query: 3   NLFEEMHSKSMVPDTVTYSNLIYGLCKLGRLTCAWKLIEEMNDRDQPANIITYNSLLDAL 182
           N+   M  + + P+ VTYS+L+ G C +  +  A  +   M+ R   AN+ +YN +++  
Sbjct: 133 NVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMINGF 192

Query: 183 CKSHQVDKAIALLMKIKDRGIHPDVFTYTILVDGFCKVGRIKDAQMIFQDLLIKDYTLNV 362
           CK    D+A+ L  ++  R + PDV TY  L++G CK G+I  A  +  ++  +    ++
Sbjct: 193 CKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDI 252

Query: 363 VAYNAMINGLCK 398
           + Y+++++ LCK
Sbjct: 253 ITYSSLLDALCK 264