BLASTX nr result
ID: Astragalus24_contig00025160
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus24_contig00025160
(527 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PNX69528.1| copia-type polyprotein, partial [Trifolium pratense] 242 2e-78
gb|KYP35468.1| Retrovirus-related Pol polyprotein from transposo... 239 5e-74
dbj|GAU13723.1| hypothetical protein TSUD_348270 [Trifolium subt... 245 2e-72
gb|PNX95857.1| copia-type polyprotein [Trifolium pratense] 244 3e-72
dbj|GAU44245.1| hypothetical protein TSUD_139380 [Trifolium subt... 233 5e-72
gb|PNX91151.1| copia-type polyprotein, partial [Trifolium pratense] 232 7e-72
gb|PNY07765.1| putative copia-type polyprotein [Trifolium pratense] 242 6e-71
dbj|GAU26636.1| hypothetical protein TSUD_102440 [Trifolium subt... 241 8e-71
gb|PNX61303.1| copia-type polyprotein, partial [Trifolium pratense] 225 8e-71
dbj|GAU23220.1| hypothetical protein TSUD_172480 [Trifolium subt... 241 1e-70
gb|PRQ38021.1| putative RNA-directed DNA polymerase [Rosa chinen... 235 2e-70
gb|KYP60819.1| Retrovirus-related Pol polyprotein from transposo... 235 2e-70
gb|KYP43087.1| Retrovirus-related Pol polyprotein from transposo... 231 3e-70
ref|XP_006590044.1| PREDICTED: uncharacterized protein LOC102665... 233 4e-70
dbj|GAU31045.1| hypothetical protein TSUD_214810 [Trifolium subt... 239 8e-70
dbj|GAU27637.1| hypothetical protein TSUD_125830 [Trifolium subt... 238 1e-69
gb|PNX94522.1| copia-type polyprotein [Trifolium pratense] 238 2e-69
dbj|GAU47154.1| hypothetical protein TSUD_287370 [Trifolium subt... 237 2e-69
gb|PNX98657.1| gag-pol polyprotein, partial [Trifolium pratense] 233 2e-69
gb|PNX77752.1| copia-type polyprotein, partial [Trifolium pratense] 232 3e-69
>gb|PNX69528.1| copia-type polyprotein, partial [Trifolium pratense]
Length = 223
Score = 242 bits (617), Expect = 2e-78
Identities = 114/175 (65%), Positives = 140/175 (80%)
Frame = -3
Query: 525 RRYGHLGMSGLKLLAQKEMVKDLPLLNEDQKVCDSCMVGKQSRDSFPKNTTWRATKRLEL 346
+RYGHL G+ +LA K+MV+ LP + E ++ CDSCM GKQ R+S PK + RA+++L+L
Sbjct: 32 QRYGHLSFKGINILALKKMVQGLPYVKEPEQKCDSCMKGKQQRESMPKKSLXRASEKLQL 91
Query: 345 VHSDICGPLTPESNSKKKYFITFIDDLTRKTWVYFLTAKSEALNTFKKFKAAAEMESGEK 166
VHSDICGP+ PESN KK+YFITFIDDL+RKTW YFL+ SEA F+KFKA E E+ K
Sbjct: 92 VHSDICGPINPESNGKKRYFITFIDDLSRKTWTYFLSENSEAFIAFQKFKAMVENETKLK 151
Query: 165 IACLRTDRGGEFTSAEFVKYCEDCGIKRQLTAAYSPQQNGVSERKNKTILNMVRS 1
I CLRTDRGGE+TS F +YC+ GIKRQLTAAY+PQQNGVSERKN+TI+NMVRS
Sbjct: 152 IQCLRTDRGGEYTSTAFNEYCDVQGIKRQLTAAYTPQQNGVSERKNRTIMNMVRS 206
>gb|KYP35468.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 508
Score = 239 bits (611), Expect = 5e-74
Identities = 114/175 (65%), Positives = 137/175 (78%)
Frame = -3
Query: 525 RRYGHLGMSGLKLLAQKEMVKDLPLLNEDQKVCDSCMVGKQSRDSFPKNTTWRATKRLEL 346
+RYGHL GLKLL QK MVK LP L E KVC C VGKQ RD+ K +TWRAT+RLEL
Sbjct: 98 KRYGHLSYGGLKLLNQKAMVKGLPELKEMDKVCPECAVGKQHRDAISKQSTWRATRRLEL 157
Query: 345 VHSDICGPLTPESNSKKKYFITFIDDLTRKTWVYFLTAKSEALNTFKKFKAAAEMESGEK 166
+HSDICGP TP SNS ++YFITFIDD +RKTWV+FL K+EA TFK+F+ E ES
Sbjct: 158 IHSDICGPSTPTSNSNRRYFITFIDDFSRKTWVFFLCEKAEAFETFKRFRLMVEKESNCV 217
Query: 165 IACLRTDRGGEFTSAEFVKYCEDCGIKRQLTAAYSPQQNGVSERKNKTILNMVRS 1
I+CLRTDRGGEF S +F ++C GI+RQLTAAY+PQQNGV+ERKN+TI++MVR+
Sbjct: 218 ISCLRTDRGGEFNSNDFNEFCTMNGIRRQLTAAYTPQQNGVAERKNRTIMDMVRT 272
>dbj|GAU13723.1| hypothetical protein TSUD_348270 [Trifolium subterraneum]
Length = 1117
Score = 245 bits (626), Expect = 2e-72
Identities = 116/174 (66%), Positives = 137/174 (78%)
Frame = -3
Query: 522 RYGHLGMSGLKLLAQKEMVKDLPLLNEDQKVCDSCMVGKQSRDSFPKNTTWRATKRLELV 343
RYGHL GL LA++EMVK LP++ ++Q VC C+V KQ RD+FPKN +WRAT +LELV
Sbjct: 429 RYGHLSFKGLNTLAKREMVKGLPMVKDNQTVCSDCVVSKQHRDTFPKNASWRATSKLELV 488
Query: 342 HSDICGPLTPESNSKKKYFITFIDDLTRKTWVYFLTAKSEALNTFKKFKAAAEMESGEKI 163
HSDICGP+ P SN KYFITF DD+TRKTW Y L K+ A + FKKFKA E ES I
Sbjct: 489 HSDICGPINPTSNGGSKYFITFTDDVTRKTWTYPLKDKASAFDCFKKFKALIEKESDCTI 548
Query: 162 ACLRTDRGGEFTSAEFVKYCEDCGIKRQLTAAYSPQQNGVSERKNKTILNMVRS 1
CLRTDRGGEFTS++F ++C + GIKRQLTAAY+PQQNGVSERKNKT+LNMVRS
Sbjct: 549 KCLRTDRGGEFTSSKFNEFCSEHGIKRQLTAAYTPQQNGVSERKNKTLLNMVRS 602
>gb|PNX95857.1| copia-type polyprotein [Trifolium pratense]
Length = 1051
Score = 244 bits (624), Expect = 3e-72
Identities = 115/174 (66%), Positives = 141/174 (81%)
Frame = -3
Query: 525 RRYGHLGMSGLKLLAQKEMVKDLPLLNEDQKVCDSCMVGKQSRDSFPKNTTWRATKRLEL 346
+RYGHL G+ +L QK+MV+ L + E ++ CD CM GKQ RD PK ++WRA++RLEL
Sbjct: 287 QRYGHLSFKGINVLVQKKMVQGLLYVKEPKQRCDRCMKGKQQRDFVPKESSWRASERLEL 346
Query: 345 VHSDICGPLTPESNSKKKYFITFIDDLTRKTWVYFLTAKSEALNTFKKFKAAAEMESGEK 166
+HSDICGP+ ESN KKKYFITFIDDL+RKTW+YFL+ KSEAL+TF+KFKA E E+ K
Sbjct: 347 IHSDICGPINLESNGKKKYFITFIDDLSRKTWIYFLSEKSEALSTFQKFKAMVENETKLK 406
Query: 165 IACLRTDRGGEFTSAEFVKYCEDCGIKRQLTAAYSPQQNGVSERKNKTILNMVR 4
I CLRTDRGGE+TS F +YC+ GIKRQLTAAY+P QNGVSERKN+TI+NMVR
Sbjct: 407 IMCLRTDRGGEYTSTIFNEYCDSHGIKRQLTAAYTPHQNGVSERKNRTIMNMVR 460
>dbj|GAU44245.1| hypothetical protein TSUD_139380 [Trifolium subterraneum]
Length = 473
Score = 233 bits (595), Expect = 5e-72
Identities = 110/174 (63%), Positives = 132/174 (75%)
Frame = -3
Query: 522 RYGHLGMSGLKLLAQKEMVKDLPLLNEDQKVCDSCMVGKQSRDSFPKNTTWRATKRLELV 343
RY HL M GLK L++ MVK LP L + + C C+ G+Q RDSFPK +WRA+++LELV
Sbjct: 261 RYAHLNMKGLKTLSKNNMVKGLPELKDMEGQCGDCLTGRQHRDSFPKQASWRASQKLELV 320
Query: 342 HSDICGPLTPESNSKKKYFITFIDDLTRKTWVYFLTAKSEALNTFKKFKAAAEMESGEKI 163
HSDICGP+TP SN+ KYFITF DD +RKTW+YFL KSEA FKKFK E ES +
Sbjct: 321 HSDICGPITPGSNAGNKYFITFTDDFSRKTWIYFLKEKSEAFEVFKKFKVLVEKESKCVV 380
Query: 162 ACLRTDRGGEFTSAEFVKYCEDCGIKRQLTAAYSPQQNGVSERKNKTILNMVRS 1
CLRTDRGGEF S +F ++C GIKRQLTA+Y+PQQNGVSERKN+T+LNMVRS
Sbjct: 381 QCLRTDRGGEFMSTQFNEFCSLQGIKRQLTASYTPQQNGVSERKNRTLLNMVRS 434
>gb|PNX91151.1| copia-type polyprotein, partial [Trifolium pratense]
Length = 430
Score = 232 bits (591), Expect = 7e-72
Identities = 111/174 (63%), Positives = 127/174 (72%)
Frame = -3
Query: 525 RRYGHLGMSGLKLLAQKEMVKDLPLLNEDQKVCDSCMVGKQSRDSFPKNTTWRATKRLEL 346
+RYGHL GL L +KEMVK LP L ED +VC CM GKQ R+ PK WR TK LEL
Sbjct: 36 KRYGHLSYKGLNTLVKKEMVKGLPNLKEDNEVCSDCMTGKQHREVIPKKVNWRXTKXLEL 95
Query: 345 VHSDICGPLTPESNSKKKYFITFIDDLTRKTWVYFLTAKSEALNTFKKFKAAAEMESGEK 166
VHSDICGP+ P SN KYF+TF DD TRKTWV L +K+ A +FK+FKA AE ES +
Sbjct: 96 VHSDICGPINPASNGGNKYFVTFTDDFTRKTWVDILQSKASAFESFKRFKAVAEKESNCQ 155
Query: 165 IACLRTDRGGEFTSAEFVKYCEDCGIKRQLTAAYSPQQNGVSERKNKTILNMVR 4
I LRTDRGGEF S F ++C D GIKRQLT AY+PQQNGVSERKN+TI+NMVR
Sbjct: 156 ILTLRTDRGGEFLSEAFNRFCTDQGIKRQLTTAYTPQQNGVSERKNRTIMNMVR 209
>gb|PNY07765.1| putative copia-type polyprotein [Trifolium pratense]
Length = 1321
Score = 242 bits (618), Expect = 6e-71
Identities = 113/174 (64%), Positives = 136/174 (78%)
Frame = -3
Query: 522 RYGHLGMSGLKLLAQKEMVKDLPLLNEDQKVCDSCMVGKQSRDSFPKNTTWRATKRLELV 343
R+GHL +GL++L QKEMVK LP + VC+ C++ KQ R+SFP+ +TWRA+ L+LV
Sbjct: 436 RFGHLNFNGLRVLQQKEMVKGLPQIETPSHVCEECLIAKQHRNSFPQESTWRASHVLQLV 495
Query: 342 HSDICGPLTPESNSKKKYFITFIDDLTRKTWVYFLTAKSEALNTFKKFKAAAEMESGEKI 163
HSDICGP+ P SNS K+YFITF DD +RKTWVYFL KSEAL F+KFKA E E + I
Sbjct: 496 HSDICGPMNPTSNSNKRYFITFTDDFSRKTWVYFLKEKSEALEMFRKFKARVEKEKNQPI 555
Query: 162 ACLRTDRGGEFTSAEFVKYCEDCGIKRQLTAAYSPQQNGVSERKNKTILNMVRS 1
CLRTDRGGE+TS+EFV CE GIKRQLTAAY+P QNGVSER+N TI+NMVRS
Sbjct: 556 QCLRTDRGGEYTSSEFVNLCESNGIKRQLTAAYTPHQNGVSERRNITIMNMVRS 609
>dbj|GAU26636.1| hypothetical protein TSUD_102440 [Trifolium subterraneum]
Length = 1188
Score = 241 bits (616), Expect = 8e-71
Identities = 114/174 (65%), Positives = 133/174 (76%)
Frame = -3
Query: 522 RYGHLGMSGLKLLAQKEMVKDLPLLNEDQKVCDSCMVGKQSRDSFPKNTTWRATKRLELV 343
RYGHL GL LA++EMVK LP++ ++Q VC C+V KQ RDSFPK T+WRAT +LEL+
Sbjct: 391 RYGHLSFKGLNALAKREMVKGLPMIKDNQTVCSDCVVSKQHRDSFPKGTSWRATTKLELI 450
Query: 342 HSDICGPLTPESNSKKKYFITFIDDLTRKTWVYFLTAKSEALNTFKKFKAAAEMESGEKI 163
HSDICGP+ P SN +YFITF DDLTRKTW Y L K+ A FKKFKA E ES I
Sbjct: 451 HSDICGPINPTSNGGNRYFITFTDDLTRKTWTYPLKDKASAFECFKKFKALVEKESNCAI 510
Query: 162 ACLRTDRGGEFTSAEFVKYCEDCGIKRQLTAAYSPQQNGVSERKNKTILNMVRS 1
CLRTDRG EFTS+ F K+C + GIKRQLTA Y+PQQNGVSERKN+T+LNMVRS
Sbjct: 511 KCLRTDRGEEFTSSNFDKFCSEHGIKRQLTATYTPQQNGVSERKNRTLLNMVRS 564
>gb|PNX61303.1| copia-type polyprotein, partial [Trifolium pratense]
Length = 298
Score = 225 bits (573), Expect = 8e-71
Identities = 103/174 (59%), Positives = 128/174 (73%)
Frame = -3
Query: 522 RYGHLGMSGLKLLAQKEMVKDLPLLNEDQKVCDSCMVGKQSRDSFPKNTTWRATKRLELV 343
RYGHL GL LA++ MVK LP+L + ++C C++ K RDS PK +WRA+ +LEL+
Sbjct: 100 RYGHLNFKGLVTLAKRTMVKGLPILKDSAELCPDCVISKHHRDSIPKTASWRASSKLELI 159
Query: 342 HSDICGPLTPESNSKKKYFITFIDDLTRKTWVYFLTAKSEALNTFKKFKAAAEMESGEKI 163
HSDICGP+ P SN +YFITF DD +RKTW Y L KS A F+KFKA E E +I
Sbjct: 160 HSDICGPINPSSNGGCRYFITFTDDFSRKTWTYPLKNKSSAFEVFRKFKALVEKELDHQI 219
Query: 162 ACLRTDRGGEFTSAEFVKYCEDCGIKRQLTAAYSPQQNGVSERKNKTILNMVRS 1
CLRTDRGGEFTS++F +C + GIKRQLT AY+PQQNGVSERKN+T++NMVRS
Sbjct: 220 KCLRTDRGGEFTSSQFNDFCSEHGIKRQLTTAYTPQQNGVSERKNRTLMNMVRS 273
>dbj|GAU23220.1| hypothetical protein TSUD_172480 [Trifolium subterraneum]
Length = 1323
Score = 241 bits (615), Expect = 1e-70
Identities = 115/174 (66%), Positives = 135/174 (77%)
Frame = -3
Query: 522 RYGHLGMSGLKLLAQKEMVKDLPLLNEDQKVCDSCMVGKQSRDSFPKNTTWRATKRLELV 343
RYGHL GL LA++EMVK LP++ +DQ VC C+V KQ RD+FPK +WRAT +LELV
Sbjct: 433 RYGHLSFKGLNTLAKREMVKGLPMVKDDQTVCSDCVVSKQHRDTFPKIASWRATSKLELV 492
Query: 342 HSDICGPLTPESNSKKKYFITFIDDLTRKTWVYFLTAKSEALNTFKKFKAAAEMESGEKI 163
HSDICGP+ P SN KYFITF DDLTRKTW Y L K+ A + F+KFKA E ES I
Sbjct: 493 HSDICGPINPTSNGGSKYFITFTDDLTRKTWTYPLKDKASAFDCFRKFKALVEKESDCTI 552
Query: 162 ACLRTDRGGEFTSAEFVKYCEDCGIKRQLTAAYSPQQNGVSERKNKTILNMVRS 1
CLRTDRGGEFTS++F ++C + GIKRQLTAAY+PQQNGVSERKN T+LNMVRS
Sbjct: 553 KCLRTDRGGEFTSSKFNEFCSEHGIKRQLTAAYTPQQNGVSERKNITLLNMVRS 606
>gb|PRQ38021.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 719
Score = 235 bits (599), Expect = 2e-70
Identities = 107/174 (61%), Positives = 137/174 (78%)
Frame = -3
Query: 522 RYGHLGMSGLKLLAQKEMVKDLPLLNEDQKVCDSCMVGKQSRDSFPKNTTWRATKRLELV 343
RY HL GLK L ++MVK LP + +VC C+VGKQSRDS PK++ WRA++RL+LV
Sbjct: 447 RYSHLNYKGLKTLHYRKMVKGLPQIKASARVCHDCLVGKQSRDSIPKSSQWRASQRLQLV 506
Query: 342 HSDICGPLTPESNSKKKYFITFIDDLTRKTWVYFLTAKSEALNTFKKFKAAAEMESGEKI 163
H+DICGP+TP SNS K+Y ++FIDD +RK WVYFLT KS+A FK++K+ E E G I
Sbjct: 507 HADICGPITPTSNSDKRYVLSFIDDFSRKMWVYFLTEKSQAFTMFKRYKSLVEKEIGFPI 566
Query: 162 ACLRTDRGGEFTSAEFVKYCEDCGIKRQLTAAYSPQQNGVSERKNKTILNMVRS 1
CLRTDRGGEFTS EF ++C+ GIKRQLTAAY+PQQNGV+ER+N+T++N+VRS
Sbjct: 567 CCLRTDRGGEFTSNEFNEFCQSNGIKRQLTAAYTPQQNGVAERRNRTVMNLVRS 620
>gb|KYP60819.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 722
Score = 235 bits (599), Expect = 2e-70
Identities = 108/174 (62%), Positives = 136/174 (78%)
Frame = -3
Query: 525 RRYGHLGMSGLKLLAQKEMVKDLPLLNEDQKVCDSCMVGKQSRDSFPKNTTWRATKRLEL 346
+R+GHL M GL+ LA ++MV+ LP+L K+C CM GKQ R SFP+ +TWRA+K L+L
Sbjct: 417 QRFGHLNMKGLRTLAYRKMVQGLPILKNQFKLCTICMTGKQQRHSFPQKSTWRASKPLQL 476
Query: 345 VHSDICGPLTPESNSKKKYFITFIDDLTRKTWVYFLTAKSEALNTFKKFKAAAEMESGEK 166
+HSDICGP+TPES+S K+Y +TFIDD +RK W YFL AKSEA +TFK+FK+ E +G
Sbjct: 477 IHSDICGPITPESHSHKRYILTFIDDYSRKMWSYFLHAKSEAFDTFKRFKSLIEKATGYY 536
Query: 165 IACLRTDRGGEFTSAEFVKYCEDCGIKRQLTAAYSPQQNGVSERKNKTILNMVR 4
I CLRTDRGGEFTS+EF YC GI RQLT YSPQQNGV+ER+N+T++NMVR
Sbjct: 537 ITCLRTDRGGEFTSSEFNDYCSSNGITRQLTTPYSPQQNGVAERRNRTLMNMVR 590
>gb|KYP43087.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 551
Score = 231 bits (589), Expect = 3e-70
Identities = 108/176 (61%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Frame = -3
Query: 525 RRYGHLGMSGLKLLAQKEMVKDLPL-LNEDQKVCDSCMVGKQSRDSFPKNTTWRATKRLE 349
RRY HL GL++L K MV+ LP L+ +KVC+ CM GKQ RD PK + WRA ++LE
Sbjct: 127 RRYAHLSHKGLRILQSKGMVRGLPSSLSTTEKVCEDCMKGKQHRDPIPKKSQWRAKQKLE 186
Query: 348 LVHSDICGPLTPESNSKKKYFITFIDDLTRKTWVYFLTAKSEALNTFKKFKAAAEMESGE 169
L+H+DICGP+ P SNS+K+YF+ FIDD TRK W+YFLT KSEA + F+ FK E ESG
Sbjct: 187 LIHADICGPIIPSSNSQKRYFLCFIDDYTRKAWIYFLTEKSEAFHYFQCFKNLVEKESGL 246
Query: 168 KIACLRTDRGGEFTSAEFVKYCEDCGIKRQLTAAYSPQQNGVSERKNKTILNMVRS 1
I CLRTDRGGEFTS+EF ++C+ GIKRQLT AY+PQQNGV+ERKN+TI+N+VR+
Sbjct: 247 MIKCLRTDRGGEFTSSEFNEFCQKTGIKRQLTTAYTPQQNGVAERKNRTIMNLVRT 302
>ref|XP_006590044.1| PREDICTED: uncharacterized protein LOC102665857 [Glycine max]
Length = 678
Score = 233 bits (595), Expect = 4e-70
Identities = 110/174 (63%), Positives = 133/174 (76%)
Frame = -3
Query: 522 RYGHLGMSGLKLLAQKEMVKDLPLLNEDQKVCDSCMVGKQSRDSFPKNTTWRATKRLELV 343
R+GHL GL+ LA+KEMV+DLP +N ++C+ C++GKQ R SFPK +T RATK LEL+
Sbjct: 388 RFGHLNFDGLERLAKKEMVRDLPSINHPDQLCERCLIGKQFRKSFPKESTTRATKPLELI 447
Query: 342 HSDICGPLTPESNSKKKYFITFIDDLTRKTWVYFLTAKSEALNTFKKFKAAAEMESGEKI 163
H+D+CGP+ P S K KYF+ FIDD +RKTWVYFL KSE FKKFKA E ESG I
Sbjct: 448 HTDVCGPIKPNSFGKNKYFLLFIDDYSRKTWVYFLKEKSEVFENFKKFKALVEKESGLSI 507
Query: 162 ACLRTDRGGEFTSAEFVKYCEDCGIKRQLTAAYSPQQNGVSERKNKTILNMVRS 1
+R+DRGGEFTS +F KYCED GI+R LT SPQQNGV+ERKN+TILNMVRS
Sbjct: 508 KAMRSDRGGEFTSNKFNKYCEDHGIRRPLTVPRSPQQNGVAERKNRTILNMVRS 561
>dbj|GAU31045.1| hypothetical protein TSUD_214810 [Trifolium subterraneum]
Length = 1248
Score = 239 bits (609), Expect = 8e-70
Identities = 112/175 (64%), Positives = 131/175 (74%)
Frame = -3
Query: 525 RRYGHLGMSGLKLLAQKEMVKDLPLLNEDQKVCDSCMVGKQSRDSFPKNTTWRATKRLEL 346
R YGHL GL +L +KEMVK LP+L E + C+ C++GK RDS P + WRAT+ L+L
Sbjct: 375 RIYGHLSHKGLSILTKKEMVKGLPVLQETTETCEDCIIGKHQRDSIPMSANWRATEELQL 434
Query: 345 VHSDICGPLTPESNSKKKYFITFIDDLTRKTWVYFLTAKSEALNTFKKFKAAAEMESGEK 166
VHSDICGP+ P SN +YFITF DD +RKTW Y LT KS AL FKKFKA E ES K
Sbjct: 435 VHSDICGPINPTSNGGSRYFITFTDDFSRKTWTYVLTEKSNALTIFKKFKAITENESNCK 494
Query: 165 IACLRTDRGGEFTSAEFVKYCEDCGIKRQLTAAYSPQQNGVSERKNKTILNMVRS 1
+ CLRTDRGGEFTS EF +C + GIKRQLT AY+PQQNGVSERKN+TI+NMVRS
Sbjct: 495 LKCLRTDRGGEFTSTEFNDFCSEHGIKRQLTTAYTPQQNGVSERKNRTIMNMVRS 549
>dbj|GAU27637.1| hypothetical protein TSUD_125830 [Trifolium subterraneum]
Length = 1199
Score = 238 bits (608), Expect = 1e-69
Identities = 113/173 (65%), Positives = 133/173 (76%)
Frame = -3
Query: 519 YGHLGMSGLKLLAQKEMVKDLPLLNEDQKVCDSCMVGKQSRDSFPKNTTWRATKRLELVH 340
YGHL GL LA++EMVK LP++ ++Q VC C+V KQ RDSFPK T+WRA +LEL+H
Sbjct: 334 YGHLSFKGLNALAKREMVKGLPVIKDNQSVCLDCVVSKQHRDSFPKGTSWRAATKLELIH 393
Query: 339 SDICGPLTPESNSKKKYFITFIDDLTRKTWVYFLTAKSEALNTFKKFKAAAEMESGEKIA 160
SDICGP+ P SN +YFITF DDLTRKTW+Y L K+ A FKKFKA E ES I
Sbjct: 394 SDICGPINPTSNGGNRYFITFTDDLTRKTWIYPLKYKASAFECFKKFKALVEKESNCVIK 453
Query: 159 CLRTDRGGEFTSAEFVKYCEDCGIKRQLTAAYSPQQNGVSERKNKTILNMVRS 1
CLRTDRGGEFTS+ F ++C + GIKRQL AAY+PQQNGVSERKN+TILNMVRS
Sbjct: 454 CLRTDRGGEFTSSNFDEFCSEHGIKRQLPAAYTPQQNGVSERKNRTILNMVRS 506
>gb|PNX94522.1| copia-type polyprotein [Trifolium pratense]
Length = 1172
Score = 238 bits (606), Expect = 2e-69
Identities = 111/174 (63%), Positives = 135/174 (77%)
Frame = -3
Query: 522 RYGHLGMSGLKLLAQKEMVKDLPLLNEDQKVCDSCMVGKQSRDSFPKNTTWRATKRLELV 343
RYGHL GL+ L QK MVKDLP + E +C +C+VGKQ R+S PK + +++KRLELV
Sbjct: 423 RYGHLNFKGLQTLQQKNMVKDLPKIEESDHMCTNCLVGKQHRESIPKTSNLKSSKRLELV 482
Query: 342 HSDICGPLTPESNSKKKYFITFIDDLTRKTWVYFLTAKSEALNTFKKFKAAAEMESGEKI 163
HSDICGP+TP SNS +YF+TFIDD +RKTW YFL KS AL FKKFK E E+GE I
Sbjct: 483 HSDICGPITPASNSDNRYFLTFIDDYSRKTWAYFLKNKSSALEYFKKFKNMVEKETGESI 542
Query: 162 ACLRTDRGGEFTSAEFVKYCEDCGIKRQLTAAYSPQQNGVSERKNKTILNMVRS 1
CLRTDRGGEF S EF +CE GIKRQ+TAAY+PQQNG+++RKN+TI++MVRS
Sbjct: 543 CCLRTDRGGEFNSNEFNNFCEVNGIKRQVTAAYTPQQNGIAKRKNRTIMDMVRS 596
>dbj|GAU47154.1| hypothetical protein TSUD_287370 [Trifolium subterraneum]
Length = 1106
Score = 237 bits (605), Expect = 2e-69
Identities = 111/174 (63%), Positives = 133/174 (76%)
Frame = -3
Query: 522 RYGHLGMSGLKLLAQKEMVKDLPLLNEDQKVCDSCMVGKQSRDSFPKNTTWRATKRLELV 343
RYGHL G+ +L +KEMVK LP+L E + C+ C+VGK RDS PK++ WRAT++L+LV
Sbjct: 352 RYGHLSHKGIIILTKKEMVKGLPVLQETAETCEDCIVGKHQRDSIPKSSNWRATEKLQLV 411
Query: 342 HSDICGPLTPESNSKKKYFITFIDDLTRKTWVYFLTAKSEALNTFKKFKAAAEMESGEKI 163
HSDICGP+TP SN +YFITF DD +RKTW Y L K+ L FKKFKA E ES K+
Sbjct: 412 HSDICGPITPTSNGGSRYFITFTDDFSRKTWTYVLIEKANDLTIFKKFKAITENESNCKL 471
Query: 162 ACLRTDRGGEFTSAEFVKYCEDCGIKRQLTAAYSPQQNGVSERKNKTILNMVRS 1
CLRTDRGGEFTS F +C + GIKRQLTAAY+PQQNGVSERKN+TI+NMVRS
Sbjct: 472 KCLRTDRGGEFTSTAFNDFCSEHGIKRQLTAAYTPQQNGVSERKNRTIMNMVRS 525
>gb|PNX98657.1| gag-pol polyprotein, partial [Trifolium pratense]
Length = 784
Score = 233 bits (595), Expect = 2e-69
Identities = 108/168 (64%), Positives = 134/168 (79%)
Frame = -3
Query: 507 GMSGLKLLAQKEMVKDLPLLNEDQKVCDSCMVGKQSRDSFPKNTTWRATKRLELVHSDIC 328
G G+ +L KEMV+ L + E ++ CDSCM GKQ R S PK + WRA+++L+L+HSDIC
Sbjct: 127 GFKGINVLTHKEMVQGLTHVKEPEQKCDSCMKGKQQRQSMPKKSPWRASEKLQLIHSDIC 186
Query: 327 GPLTPESNSKKKYFITFIDDLTRKTWVYFLTAKSEALNTFKKFKAAAEMESGEKIACLRT 148
GP+ PESN KK+YFITFIDDL+RKTW+YFL+ KSEAL F+KFKA E E+ KI CLRT
Sbjct: 187 GPINPESNGKKRYFITFIDDLSRKTWIYFLSEKSEALTIFQKFKAIVENETKLKIQCLRT 246
Query: 147 DRGGEFTSAEFVKYCEDCGIKRQLTAAYSPQQNGVSERKNKTILNMVR 4
DRGGE+TS F +YC+ GIKRQLT +Y+PQQNGVSERKN+TI+NMVR
Sbjct: 247 DRGGEYTSTAFNEYCDIQGIKRQLTTSYTPQQNGVSERKNRTIMNMVR 294
>gb|PNX77752.1| copia-type polyprotein, partial [Trifolium pratense]
Length = 736
Score = 232 bits (592), Expect = 3e-69
Identities = 107/174 (61%), Positives = 134/174 (77%)
Frame = -3
Query: 525 RRYGHLGMSGLKLLAQKEMVKDLPLLNEDQKVCDSCMVGKQSRDSFPKNTTWRATKRLEL 346
+RYGHL G+ +L QK+MV LP L E + C +CM GKQ + S PK ++WRA+ +LEL
Sbjct: 201 QRYGHLSFKGMNVLTQKQMVIGLPKLKESNEKCTNCMKGKQQKQSAPKKSSWRASTKLEL 260
Query: 345 VHSDICGPLTPESNSKKKYFITFIDDLTRKTWVYFLTAKSEALNTFKKFKAAAEMESGEK 166
VHSDICGP+ PESN KK+YFIT DDL+RKTW+YF+ KSEAL FKKFKA E E +
Sbjct: 261 VHSDICGPINPESNGKKRYFITSTDDLSRKTWIYFMNEKSEALTMFKKFKALVENECKQA 320
Query: 165 IACLRTDRGGEFTSAEFVKYCEDCGIKRQLTAAYSPQQNGVSERKNKTILNMVR 4
I C RTDRGGE+TS++F ++C+ GI+RQLTAAY+P QNGVSE KN+TI+NMVR
Sbjct: 321 IQCFRTDRGGEYTSSDFNEFCDAHGIRRQLTAAYTPHQNGVSESKNRTIVNMVR 374