BLASTX nr result

ID: Astragalus24_contig00025140 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00025140
         (508 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_016542632.1| PREDICTED: serine/arginine-rich splicing fac...    59   1e-11
gb|KRH67604.1| hypothetical protein GLYMA_03G175600 [Glycine max]      67   5e-10
ref|XP_012569432.1| PREDICTED: serine/arginine-rich splicing fac...    65   1e-09
ref|XP_004493917.1| PREDICTED: serine/arginine-rich splicing fac...    65   1e-09
dbj|GAU35358.1| hypothetical protein TSUD_337500 [Trifolium subt...    53   1e-08
gb|EOY07655.1| RNA-binding family protein with retrovirus zinc f...    57   2e-06

>ref|XP_016542632.1| PREDICTED: serine/arginine-rich splicing factor RS2Z33-like isoform
           X1 [Capsicum annuum]
          Length = 338

 Score = 59.3 bits (142), Expect(3) = 1e-11
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = -3

Query: 308 LSNDGLTVCGNHFRRVRDVDMKHDYAFV 225
           +SNDGLTV GNHFRRVRDVDMKHDYAFV
Sbjct: 49  ISNDGLTVSGNHFRRVRDVDMKHDYAFV 76



 Score = 29.3 bits (64), Expect(3) = 1e-11
 Identities = 12/16 (75%), Positives = 12/16 (75%)
 Frame = -1

Query: 421 DFGDSFCNVIAYFYGI 374
           DFG  F NV AYFYGI
Sbjct: 12  DFGGPFYNVFAYFYGI 27



 Score = 28.1 bits (61), Expect(3) = 1e-11
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -2

Query: 384 FMELATITNWCLVRL*GAKYHSVPVV 307
           F  + TI+NWC+V L G + H +PV+
Sbjct: 24  FYGIPTISNWCIVHLEG-QIHELPVL 48


>gb|KRH67604.1| hypothetical protein GLYMA_03G175600 [Glycine max]
          Length = 297

 Score = 67.0 bits (162), Expect = 5e-10
 Identities = 36/62 (58%), Positives = 38/62 (61%)
 Frame = -3

Query: 188 FLLTSISAQCFAQRMASSICLEEFN*IMVRILCYFLGLFLTSFGQEFSDPRDADDARYNL 9
           F  TSIS   FA R               +I CYF+GLFLT F QEFSDPRDADDARYNL
Sbjct: 3   FFFTSISPHAFAPRWLLVSARRNSVVNEGKIRCYFIGLFLTYFEQEFSDPRDADDARYNL 62

Query: 8   DG 3
           DG
Sbjct: 63  DG 64


>ref|XP_012569432.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32 isoform X4
           [Cicer arietinum]
          Length = 265

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = -3

Query: 107 MVRILCYFLGLFLTSFGQEFSDPRDADDARYNLDG 3
           MVR LCYF G++LT F QEFSDPRDADDARYNLDG
Sbjct: 1   MVRFLCYFCGVYLTYFEQEFSDPRDADDARYNLDG 35


>ref|XP_004493917.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32 isoform X3
           [Cicer arietinum]
          Length = 266

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = -3

Query: 107 MVRILCYFLGLFLTSFGQEFSDPRDADDARYNLDG 3
           MVR LCYF G++LT F QEFSDPRDADDARYNLDG
Sbjct: 1   MVRFLCYFCGVYLTYFEQEFSDPRDADDARYNLDG 35


>dbj|GAU35358.1| hypothetical protein TSUD_337500 [Trifolium subterraneum]
          Length = 317

 Score = 53.1 bits (126), Expect(2) = 1e-08
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = -1

Query: 427 SLDFGDSFCNVIAYFYGIGNNHKLV 353
           S+DFGDSFCNVIA FYGIGNNHKLV
Sbjct: 74  SVDFGDSFCNVIACFYGIGNNHKLV 98



 Score = 33.9 bits (76), Expect(2) = 1e-08
 Identities = 15/18 (83%), Positives = 15/18 (83%)
 Frame = -3

Query: 278 NHFRRVRDVDMKHDYAFV 225
           NH   VRDVDMKHDYAFV
Sbjct: 94  NHKLVVRDVDMKHDYAFV 111


>gb|EOY07655.1| RNA-binding family protein with retrovirus zinc finger-like domain,
           putative [Theobroma cacao]
          Length = 312

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 43/101 (42%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
 Frame = -3

Query: 506 RFLGFSLN--PKVYGGRVALVVLVEIPA*S*LWRFFL*CYCVFLWNWQQSQTGV*FVFEG 333
           RFLGF L   P V G   AL  LVEIPA          CY                    
Sbjct: 36  RFLGFCLTWRPMVRGS--ALAELVEIPAQ---------CY-------------------- 64

Query: 332 RSIIQFP*LSNDGLTVCGNHFRRVRDVDMKHDYAFVVSCFP 210
                   LSNDGLTV  N+FRR+RDVDMKHD+AFV   +P
Sbjct: 65  --------LSNDGLTVSSNNFRRIRDVDMKHDFAFVELSYP 97


Top