BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00025135
         (645 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP72642.1| Retrovirus-related Pol polyprotein from transposo...   224   5e-70
gb|PNX65962.1| copia LTR rider [Trifolium pratense]                   218   1e-68
gb|KZV43791.1| hypothetical protein F511_41481 [Dorcoceras hygro...   221   2e-68
gb|PNX61902.1| retrovirus-related Pol polyprotein from transposo...   218   7e-68
gb|OAE29077.1| hypothetical protein AXG93_1626s1040 [Marchantia ...   216   1e-66
gb|KYP42039.1| Retrovirus-related Pol polyprotein from transposo...   216   1e-65
gb|PNX69499.1| retrovirus-related Pol polyprotein from transposo...   211   2e-65
gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposo...   216   2e-64
gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposo...   218   5e-62
gb|KYP72919.1| Retrovirus-related Pol polyprotein from transposo...   216   5e-62
gb|PNX88978.1| retrovirus-related Pol polyprotein from transposo...   204   6e-62
gb|KYP48030.1| Retrovirus-related Pol polyprotein from transposo...   200   1e-61
ref|XP_024006146.1| uncharacterized protein LOC112082836 [Eutrem...   200   1e-61
gb|KYP57718.1| Retrovirus-related Pol polyprotein from transposo...   207   1e-61
gb|PRQ16639.1| putative RNA-directed DNA polymerase [Rosa chinen...   209   2e-61
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo...   216   2e-61
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]          202   2e-61
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...   216   2e-61
gb|KYP36395.1| Retrovirus-related Pol polyprotein from transposo...   204   4e-61
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   215   6e-61

>gb|KYP72642.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 296

 Score =  224 bits (572), Expect = 5e-70
 Identities = 108/190 (56%), Positives = 142/190 (74%)
 Frame = -2

Query: 644 LANPEQQHWLAVNSKHVLRYLKGSIKLGLSYHRSDLDSGGVVGYVDTDFAGDRDKRRSLT 465
           +ANP Q HW A+  K + RYL G++  GL + RS  +   V+GYVD DFAG  D R+SLT
Sbjct: 106 MANPGQLHWNAL--KWLFRYLNGTLGCGLRFKRSHTEGDAVIGYVDADFAGCLDTRKSLT 163

Query: 464 GYVFTLFGKTVS*KASLQHVVALSTTEAEYIGVTKAVKETLWLKGLVNELGINKNSVNVH 285
           GYVFT+FG  V+ KA+LQ VV+LSTTEAEYI +T+  KE  WLKGL+ +LGIN++ V ++
Sbjct: 164 GYVFTMFGSAVTWKANLQSVVSLSTTEAEYIALTEGAKEGSWLKGLIGDLGINQSRVTIN 223

Query: 284 CDNQSAIHLCKNQTSHERTKHIDIRLHWIKDIINEGKVQIRKIHTAHNPADFITKVVPLS 105
           CD+QSAIHL  + T HERTKHIDIR H+I+D+I   K+Q+ KI T  NPAD +TK +P +
Sbjct: 224 CDSQSAIHLANHHTYHERTKHIDIRYHFIRDMIETRKIQVLKIATEDNPADMLTKSLPRA 283

Query: 104 KFRHCLNLLN 75
           KF+HCL+L+N
Sbjct: 284 KFKHCLDLIN 293


>gb|PNX65962.1| copia LTR rider [Trifolium pratense]
          Length = 212

 Score =  218 bits (555), Expect = 1e-68
 Identities = 104/190 (54%), Positives = 140/190 (73%)
 Frame = -2

Query: 644 LANPEQQHWLAVNSKHVLRYLKGSIKLGLSYHRSDLDSGGVVGYVDTDFAGDRDKRRSLT 465
           +ANP Q HW A+  K VLRYL GS+K GL Y R D     + GYVD D+AG+ D R+SL+
Sbjct: 22  MANPGQVHWQAL--KWVLRYLNGSLKGGLRYKRIDPRRDALEGYVDADYAGNVDTRKSLS 79

Query: 464 GYVFTLFGKTVS*KASLQHVVALSTTEAEYIGVTKAVKETLWLKGLVNELGINKNSVNVH 285
           G+VFTLFG TV+ KA+ Q VVALSTT+AEYI + + VKE +WLKG++ E+GI +  V +H
Sbjct: 80  GFVFTLFGTTVTWKANQQSVVALSTTQAEYIALVEGVKEVIWLKGMIGEMGIGQGFVKIH 139

Query: 284 CDNQSAIHLCKNQTSHERTKHIDIRLHWIKDIINEGKVQIRKIHTAHNPADFITKVVPLS 105
           CD+Q AIHL  +Q  HERTKHIDIRLH+++D+I   ++ + K+ +  NPAD  TK +P S
Sbjct: 140 CDSQCAIHLANHQVYHERTKHIDIRLHFVRDMIETKEIIVEKVASEENPADMFTKSLPRS 199

Query: 104 KFRHCLNLLN 75
           +F+HCL+L+N
Sbjct: 200 RFKHCLDLIN 209


>gb|KZV43791.1| hypothetical protein F511_41481 [Dorcoceras hygrometricum]
          Length = 300

 Score =  221 bits (562), Expect = 2e-68
 Identities = 109/192 (56%), Positives = 144/192 (75%)
 Frame = -2

Query: 644 LANPEQQHWLAVNSKHVLRYLKGSIKLGLSYHRSDLDSGGVVGYVDTDFAGDRDKRRSLT 465
           +ANP + HW A+  K ++RYLKG+  LGL Y  +      V+GYVD+D+AG  D RRSLT
Sbjct: 106 MANPGKCHWQAL--KWMMRYLKGTQNLGLVYGGNQTGGEAVLGYVDSDYAGSIDTRRSLT 163

Query: 464 GYVFTLFGKTVS*KASLQHVVALSTTEAEYIGVTKAVKETLWLKGLVNELGINKNSVNVH 285
           GYVFT++G  VS KA+LQ VVALSTTEAEYI VT+AVKE LWLKGL +EL +  +++ + 
Sbjct: 164 GYVFTVYGTAVSWKANLQSVVALSTTEAEYIAVTEAVKEALWLKGLASELKLQDDTLVLL 223

Query: 284 CDNQSAIHLCKNQTSHERTKHIDIRLHWIKDIINEGKVQIRKIHTAHNPADFITKVVPLS 105
           CD+QSAIHL KNQ  HERTKHID++LH++++++  G+V I K+ T  N AD ITKV+P +
Sbjct: 224 CDSQSAIHLTKNQVFHERTKHIDVKLHFVREVVAGGEVVIEKVSTEENAADMITKVLPSN 283

Query: 104 KFRHCLNLLNVH 69
           KF HCL LL ++
Sbjct: 284 KFHHCLKLLRIN 295


>gb|PNX61902.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 275

 Score =  218 bits (556), Expect = 7e-68
 Identities = 104/190 (54%), Positives = 140/190 (73%)
 Frame = -2

Query: 644 LANPEQQHWLAVNSKHVLRYLKGSIKLGLSYHRSDLDSGGVVGYVDTDFAGDRDKRRSLT 465
           +ANP Q HW A+  K VLRYL GS+K GL Y + D     + GYVD D+AG+ D R+SL+
Sbjct: 85  MANPGQVHWQAL--KWVLRYLNGSLKGGLRYKKIDPRKDALEGYVDADYAGNVDTRKSLS 142

Query: 464 GYVFTLFGKTVS*KASLQHVVALSTTEAEYIGVTKAVKETLWLKGLVNELGINKNSVNVH 285
           G+VFTLFG  V+ KA+ Q VVALSTT+AEYI + + VKE +WLKG++ ELGI +  V +H
Sbjct: 143 GFVFTLFGTAVTWKANQQSVVALSTTQAEYIALVEGVKEAIWLKGMIGELGIGQGCVKIH 202

Query: 284 CDNQSAIHLCKNQTSHERTKHIDIRLHWIKDIINEGKVQIRKIHTAHNPADFITKVVPLS 105
           CD+QSAIHL  +Q  HERTKHIDIRLH+++D+I   ++ + K+ +  NPAD  TK +P S
Sbjct: 203 CDSQSAIHLANHQVYHERTKHIDIRLHFVRDMIETKEIIVEKVASEENPADMFTKSLPRS 262

Query: 104 KFRHCLNLLN 75
           +F+HCL+L+N
Sbjct: 263 RFKHCLDLIN 272


>gb|OAE29077.1| hypothetical protein AXG93_1626s1040 [Marchantia polymorpha subsp.
           ruderalis]
          Length = 293

 Score =  216 bits (549), Expect = 1e-66
 Identities = 107/192 (55%), Positives = 141/192 (73%), Gaps = 1/192 (0%)
 Frame = -2

Query: 644 LANPEQQHWLAVNSKHVLRYLKGSIKLGLSYHRSDLDSG-GVVGYVDTDFAGDRDKRRSL 468
           ++NP + HW AV  K VLRY++GS   G+ Y  ++  S   V G+VD+D+AG  D RRSL
Sbjct: 95  MSNPGKAHWQAV--KWVLRYIRGSHDTGIIYGCNNRSSEFQVEGFVDSDYAGSLDTRRSL 152

Query: 467 TGYVFTLFGKTVS*KASLQHVVALSTTEAEYIGVTKAVKETLWLKGLVNELGINKNSVNV 288
           TGY+FT+ G  +S K++LQ VV LSTTEAEYI VT+AVKE +WLKGLV ELG N+  V +
Sbjct: 153 TGYLFTIGGGVISWKSNLQPVVTLSTTEAEYIAVTEAVKEAIWLKGLVTELGFNQKQVTI 212

Query: 287 HCDNQSAIHLCKNQTSHERTKHIDIRLHWIKDIINEGKVQIRKIHTAHNPADFITKVVPL 108
           HCDN SAIHL K+Q  H+++KHID+++H+++DIIN G V I KI T  NP+D +TK VP 
Sbjct: 213 HCDNHSAIHLSKHQVFHDKSKHIDMKMHFVRDIINSGGVSIEKISTEDNPSDMLTKSVPG 272

Query: 107 SKFRHCLNLLNV 72
            KF HCL L+N+
Sbjct: 273 HKFAHCLGLINM 284


>gb|KYP42039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 394

 Score =  216 bits (551), Expect = 1e-65
 Identities = 98/190 (51%), Positives = 141/190 (74%)
 Frame = -2

Query: 638 NPEQQHWLAVNSKHVLRYLKGSIKLGLSYHRSDLDSGGVVGYVDTDFAGDRDKRRSLTGY 459
           NP + HW AV  K + RYLKG+  +GL + R+   +  V G+VD+D+ GD D+RRSL+GY
Sbjct: 205 NPGKDHWSAV--KWIFRYLKGTSNIGLVFDRNKATTNNVAGFVDSDYGGDLDRRRSLSGY 262

Query: 458 VFTLFGKTVS*KASLQHVVALSTTEAEYIGVTKAVKETLWLKGLVNELGINKNSVNVHCD 279
           +FTL    +S KASLQ + ALSTTEAEY+  T+ VKE LW++GLV ELG+ ++ + V CD
Sbjct: 263 IFTLCNSAISWKASLQSIAALSTTEAEYVSATEGVKEALWIRGLVKELGLTQDVLTVFCD 322

Query: 278 NQSAIHLCKNQTSHERTKHIDIRLHWIKDIINEGKVQIRKIHTAHNPADFITKVVPLSKF 99
           +QSAIHL KN   H++TKHID++ H+I+DI+  G+V ++K+HT+ NPAD +TK +P +KF
Sbjct: 323 SQSAIHLTKNSRYHDKTKHIDVKHHFIRDIVTIGEVLLQKVHTSENPADMLTKPLPNAKF 382

Query: 98  RHCLNLLNVH 69
           +HCL L+ ++
Sbjct: 383 QHCLGLVGLY 392


>gb|PNX69499.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 227

 Score =  211 bits (536), Expect = 2e-65
 Identities = 102/191 (53%), Positives = 139/191 (72%)
 Frame = -2

Query: 644 LANPEQQHWLAVNSKHVLRYLKGSIKLGLSYHRSDLDSGGVVGYVDTDFAGDRDKRRSLT 465
           +ANP + HW AV  K +LRYLKG+I   L +     D+  + G+VD+D+AGD D+RRS T
Sbjct: 35  MANPGKTHWEAV--KWILRYLKGTIDTCLCFGG---DACHINGFVDSDYAGDLDRRRSTT 89

Query: 464 GYVFTLFGKTVS*KASLQHVVALSTTEAEYIGVTKAVKETLWLKGLVNELGINKNSVNVH 285
           GYVF + G  VS ++ LQ  VALSTTEAEY+ V + VKE LWL+GL+++LG+ +  V + 
Sbjct: 90  GYVFQIHGVPVSWRSMLQSTVALSTTEAEYMAVAEGVKEALWLRGLLDDLGMKQECVKLS 149

Query: 284 CDNQSAIHLCKNQTSHERTKHIDIRLHWIKDIINEGKVQIRKIHTAHNPADFITKVVPLS 105
           CD+QSA+HL KNQ  H RTKHID+R H+++D++ EG + + K+HT  N AD +TKVV  S
Sbjct: 150 CDSQSALHLAKNQVHHARTKHIDVRYHFVRDVVEEGNISLTKVHTDENSADMLTKVVSGS 209

Query: 104 KFRHCLNLLNV 72
           KF+HCLNLLN+
Sbjct: 210 KFQHCLNLLNI 220


>gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 503

 Score =  216 bits (551), Expect = 2e-64
 Identities = 98/190 (51%), Positives = 141/190 (74%)
 Frame = -2

Query: 638 NPEQQHWLAVNSKHVLRYLKGSIKLGLSYHRSDLDSGGVVGYVDTDFAGDRDKRRSLTGY 459
           NP + HW AV  K + RYLKG+  +GL + R+   +  V G+VD+D+ GD D+RRSL+GY
Sbjct: 314 NPGKDHWSAV--KWIFRYLKGTSNIGLVFDRNKATTNNVAGFVDSDYGGDLDRRRSLSGY 371

Query: 458 VFTLFGKTVS*KASLQHVVALSTTEAEYIGVTKAVKETLWLKGLVNELGINKNSVNVHCD 279
           +FTL    +S KASLQ + ALSTTEAEY+  T+ VKE LW++GLV ELG+ ++ + V CD
Sbjct: 372 IFTLCNSAISWKASLQSIAALSTTEAEYVSATEGVKEALWIRGLVKELGLTQDVLTVFCD 431

Query: 278 NQSAIHLCKNQTSHERTKHIDIRLHWIKDIINEGKVQIRKIHTAHNPADFITKVVPLSKF 99
           +QSAIHL KN   H++TKHID++ H+I+DI+  G+V ++K+HT+ NPAD +TK +P +KF
Sbjct: 432 SQSAIHLTKNSRYHDKTKHIDVKHHFIRDIVTIGEVLLQKVHTSENPADMLTKPLPNAKF 491

Query: 98  RHCLNLLNVH 69
           +HCL L+ ++
Sbjct: 492 QHCLGLVGLY 501


>gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Capsicum
            baccatum]
          Length = 1526

 Score =  218 bits (556), Expect = 5e-62
 Identities = 101/186 (54%), Positives = 139/186 (74%)
 Frame = -2

Query: 638  NPEQQHWLAVNSKHVLRYLKGSIKLGLSYHRSDLDSGGVVGYVDTDFAGDRDKRRSLTGY 459
            NP +QHW +V  K +LRYLKGS  +GL + R   D GGVVGYVD D+ GD D+RRSL+ Y
Sbjct: 803  NPGKQHWESV--KWILRYLKGSPDIGLVFDRQRSDPGGVVGYVDADYGGDLDRRRSLSAY 860

Query: 458  VFTLFGKTVS*KASLQHVVALSTTEAEYIGVTKAVKETLWLKGLVNELGINKNSVNVHCD 279
            +FTL G  +S  +SLQ + ALSTTEAEYI  T+ VKE +WL+GLV ELG+ ++ + + CD
Sbjct: 861  IFTLCGSAISWYSSLQAIAALSTTEAEYIAATEGVKEAIWLRGLVAELGLQQHILVMFCD 920

Query: 278  NQSAIHLCKNQTSHERTKHIDIRLHWIKDIINEGKVQIRKIHTAHNPADFITKVVPLSKF 99
            +Q+A+HL +N+  H +TKHIDI+ H+I+DI++ G++ + KIHT  NPAD +TK +P +KF
Sbjct: 921  SQTAVHLARNRKHHSKTKHIDIKCHFIRDIVDAGEITVEKIHTTENPADMLTKPLPAAKF 980

Query: 98   RHCLNL 81
             HCL+L
Sbjct: 981  DHCLDL 986


>gb|KYP72919.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 865

 Score =  216 bits (551), Expect = 5e-62
 Identities = 98/190 (51%), Positives = 141/190 (74%)
 Frame = -2

Query: 638  NPEQQHWLAVNSKHVLRYLKGSIKLGLSYHRSDLDSGGVVGYVDTDFAGDRDKRRSLTGY 459
            NP + HW AV  K + RYLKG+  +GL + R+   +  V G+VD+D+ GD D+RRSL+GY
Sbjct: 676  NPGKDHWSAV--KWIFRYLKGTSNIGLVFDRNKATTNNVAGFVDSDYGGDLDRRRSLSGY 733

Query: 458  VFTLFGKTVS*KASLQHVVALSTTEAEYIGVTKAVKETLWLKGLVNELGINKNSVNVHCD 279
            +FTL    +S KASLQ + ALSTTEAEY+  T+ VKE LW++GLV ELG+ ++ + V CD
Sbjct: 734  IFTLCNSAISWKASLQSIAALSTTEAEYVSATEGVKEALWIRGLVKELGLTQDVLTVFCD 793

Query: 278  NQSAIHLCKNQTSHERTKHIDIRLHWIKDIINEGKVQIRKIHTAHNPADFITKVVPLSKF 99
            +QSAIHL KN   H++TKHID++ H+I+DI+  G+V ++K+HT+ NPAD +TK +P +KF
Sbjct: 794  SQSAIHLTKNSRYHDKTKHIDVKHHFIRDIVTIGEVLLQKVHTSENPADMLTKPLPNAKF 853

Query: 98   RHCLNLLNVH 69
            +HCL L+ ++
Sbjct: 854  QHCLGLVGLY 863


>gb|PNX88978.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 303

 Score =  204 bits (519), Expect = 6e-62
 Identities = 97/183 (53%), Positives = 132/183 (72%)
 Frame = -2

Query: 623 HWLAVNSKHVLRYLKGSIKLGLSYHRSDLDSGGVVGYVDTDFAGDRDKRRSLTGYVFTLF 444
           HW A+  K VLRYL GS+K GL Y R D     + GYVD D+AG+ D R+SL+G+V TLF
Sbjct: 120 HWQAL--KWVLRYLNGSLKGGLRYKRIDPGRDALEGYVDADYAGNVDTRKSLSGFVLTLF 177

Query: 443 GKTVS*KASLQHVVALSTTEAEYIGVTKAVKETLWLKGLVNELGINKNSVNVHCDNQSAI 264
           G  V+ KA+ Q VVALSTT+AEYI + + VKE +WLKG++ E+GI +  V +HCD+QS I
Sbjct: 178 GTAVTWKANQQSVVALSTTQAEYIALVEGVKEAIWLKGMIGEMGIGQGCVKIHCDSQSVI 237

Query: 263 HLCKNQTSHERTKHIDIRLHWIKDIINEGKVQIRKIHTAHNPADFITKVVPLSKFRHCLN 84
           HL  +Q  HERTKHIDIRLH+++D+I   ++ + K+ +  N AD  TK +P S+F+HCL+
Sbjct: 238 HLANHQVYHERTKHIDIRLHFVRDMIETKEIIVEKVASEENXADMFTKSLPRSRFKHCLD 297

Query: 83  LLN 75
           L+N
Sbjct: 298 LIN 300


>gb|KYP48030.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 194

 Score =  200 bits (508), Expect = 1e-61
 Identities = 104/196 (53%), Positives = 138/196 (70%), Gaps = 5/196 (2%)
 Frame = -2

Query: 644 LANPEQQHWLAVNSKHVLRYLKGSIKLGLSYHRSDLDSGGVV---GYVDTDFAGDRDKRR 474
           +ANP + HW A+  K VLRYL G+  +GL Y    +  GGV    G+VD+DFAG  D R+
Sbjct: 1   MANPGKPHWEAI--KWVLRYLCGTTDVGLKY----ISQGGVPEIEGFVDSDFAGSIDTRK 54

Query: 473 SLTGYVFTLFGKTVS*KASLQHVVALSTTEAEYIGVTKAVKETLWLKGLVNE--LGINKN 300
           S+TGYVF +FG TVS KA+LQ VVALS+TEAEY+   +AVKE LWL+GLV+E  LG    
Sbjct: 55  SITGYVFKVFGNTVSWKANLQGVVALSSTEAEYMAACEAVKEALWLRGLVSELLLGEELE 114

Query: 299 SVNVHCDNQSAIHLCKNQTSHERTKHIDIRLHWIKDIINEGKVQIRKIHTAHNPADFITK 120
           + +++CDNQSAI L KNQ  HERTKH+D++ H+++D++    V+I K+ T  N AD +TK
Sbjct: 115 TTSIYCDNQSAICLTKNQVHHERTKHVDVKFHFVRDVVASDVVKIEKVATEENAADMLTK 174

Query: 119 VVPLSKFRHCLNLLNV 72
            +P +KF  CL LLNV
Sbjct: 175 ALPSNKFEFCLKLLNV 190


>ref|XP_024006146.1| uncharacterized protein LOC112082836 [Eutrema salsugineum]
          Length = 206

 Score =  200 bits (509), Expect = 1e-61
 Identities = 98/191 (51%), Positives = 138/191 (72%)
 Frame = -2

Query: 644 LANPEQQHWLAVNSKHVLRYLKGSIKLGLSYHRSDLDSGGVVGYVDTDFAGDRDKRRSLT 465
           ++ P Q+HW  V  K VL YL+G+ K+ L++ +    S  V GY D+D+A D D+RRS+T
Sbjct: 19  MSKPGQEHWADV--KWVLIYLRGASKVNLTFVKGS--SFSVEGYCDSDYATDLDRRRSVT 74

Query: 464 GYVFTLFGKTVS*KASLQHVVALSTTEAEYIGVTKAVKETLWLKGLVNELGINKNSVNVH 285
           GYVF ++G TV  +++LQ VVALSTTEAEY+ ++ AVKE +WLKG+ +ELG ++ SV +H
Sbjct: 75  GYVFKVWGNTVCWRSNLQSVVALSTTEAEYMALSSAVKEAIWLKGICDELGFSQGSVKIH 134

Query: 284 CDNQSAIHLCKNQTSHERTKHIDIRLHWIKDIINEGKVQIRKIHTAHNPADFITKVVPLS 105
           CD+QSA+ L KN   HERTKH+  + H I+DI+ +G V + KIHT+ NPADF+TK +P  
Sbjct: 135 CDSQSALALAKNSVYHERTKHVATKYHHIRDIVAQGDVTLFKIHTSRNPADFLTKALPGP 194

Query: 104 KFRHCLNLLNV 72
           KF  C +LLN+
Sbjct: 195 KFELCCDLLNI 205


>gb|KYP57718.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 418

 Score =  207 bits (526), Expect = 1e-61
 Identities = 100/189 (52%), Positives = 135/189 (71%)
 Frame = -2

Query: 644 LANPEQQHWLAVNSKHVLRYLKGSIKLGLSYHRSDLDSGGVVGYVDTDFAGDRDKRRSLT 465
           + NP Q HW  +  K +LRY+ G+++ GL Y +       + G+VD D+AG  D R+SL+
Sbjct: 229 MGNPGQAHWETL--KWMLRYVNGTLESGLLYRKRHQGGAAIEGFVDADYAGCVDTRKSLS 286

Query: 464 GYVFTLFGKTVS*KASLQHVVALSTTEAEYIGVTKAVKETLWLKGLVNELGINKNSVNVH 285
           GYVFTLFG  VS KA+LQ VVALSTTEAEYI + + VKE LWLKG++NELGI +  V +H
Sbjct: 287 GYVFTLFGTAVSWKANLQSVVALSTTEAEYIALAEGVKEGLWLKGMLNELGIEQECVQIH 346

Query: 284 CDNQSAIHLCKNQTSHERTKHIDIRLHWIKDIINEGKVQIRKIHTAHNPADFITKVVPLS 105
           CD+QSAIHL  +Q  HERTKHID++ H+I++++  G V+I KI +  NPAD +TK +P  
Sbjct: 347 CDSQSAIHLANHQMYHERTKHIDVKHHFIREVVETGTVRIVKIASEDNPADMLTKSLPRC 406

Query: 104 KFRHCLNLL 78
           KF  CL+L+
Sbjct: 407 KFERCLDLV 415


>gb|PRQ16639.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 502

 Score =  209 bits (531), Expect = 2e-61
 Identities = 105/191 (54%), Positives = 136/191 (71%)
 Frame = -2

Query: 644 LANPEQQHWLAVNSKHVLRYLKGSIKLGLSYHRSDLDSGGVVGYVDTDFAGDRDKRRSLT 465
           ++NP + HW AV  K +LRYLKG+ +LG+ + R   +   V G+VD D+AGD DKRRS T
Sbjct: 312 MSNPGKPHWEAV--KWILRYLKGTRQLGIMFERKQ-EVACVAGFVDADYAGDLDKRRSTT 368

Query: 464 GYVFTLFGKTVS*KASLQHVVALSTTEAEYIGVTKAVKETLWLKGLVNELGINKNSVNVH 285
           GYVFT  G  VS K++LQ V ALSTTEAEY+ +T+A KE +WL GL +E GI++  V V 
Sbjct: 369 GYVFTCGGGPVSWKSTLQAVTALSTTEAEYMALTEASKEAIWLNGLASEFGIHQEGVVVK 428

Query: 284 CDNQSAIHLCKNQTSHERTKHIDIRLHWIKDIINEGKVQIRKIHTAHNPADFITKVVPLS 105
           CD+QSAIHL KNQ  H RTKHID+R H I+D +  G + + K+HT  N AD +TK V + 
Sbjct: 429 CDSQSAIHLAKNQVFHARTKHIDVRYHRIRDWVESGNIIVEKVHTNDNAADCLTKPVAVE 488

Query: 104 KFRHCLNLLNV 72
           KF+HCLNLL+V
Sbjct: 489 KFKHCLNLLSV 499


>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1032

 Score =  216 bits (551), Expect = 2e-61
 Identities = 98/190 (51%), Positives = 141/190 (74%)
 Frame = -2

Query: 638  NPEQQHWLAVNSKHVLRYLKGSIKLGLSYHRSDLDSGGVVGYVDTDFAGDRDKRRSLTGY 459
            NP + HW AV  K + RYLKG+  +GL + R+   +  V G+VD+D+ GD D+RRSL+GY
Sbjct: 843  NPGKDHWSAV--KWIFRYLKGTSNIGLVFDRNKATTNNVAGFVDSDYGGDLDRRRSLSGY 900

Query: 458  VFTLFGKTVS*KASLQHVVALSTTEAEYIGVTKAVKETLWLKGLVNELGINKNSVNVHCD 279
            +FTL    +S KASLQ + ALSTTEAEY+  T+ VKE LW++GLV ELG+ ++ + V CD
Sbjct: 901  IFTLCNSAISWKASLQSIAALSTTEAEYVSATEGVKEALWIRGLVKELGLTQDVLTVFCD 960

Query: 278  NQSAIHLCKNQTSHERTKHIDIRLHWIKDIINEGKVQIRKIHTAHNPADFITKVVPLSKF 99
            +QSAIHL KN   H++TKHID++ H+I+DI+  G+V ++K+HT+ NPAD +TK +P +KF
Sbjct: 961  SQSAIHLTKNSRYHDKTKHIDVKHHFIRDIVTIGEVLLQKVHTSENPADMLTKPLPNAKF 1020

Query: 98   RHCLNLLNVH 69
            +HCL L+ ++
Sbjct: 1021 QHCLGLVGLY 1030


>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
          Length = 297

 Score =  202 bits (515), Expect = 2e-61
 Identities = 101/189 (53%), Positives = 137/189 (72%)
 Frame = -2

Query: 638 NPEQQHWLAVNSKHVLRYLKGSIKLGLSYHRSDLDSGGVVGYVDTDFAGDRDKRRSLTGY 459
           NP +  WLAV  K +LRYL G++ +GL + ++       VGY D+DFAGD DK+RS +GY
Sbjct: 109 NPGKSQWLAV--KWILRYLYGTVDVGLLFKKNCGQQ--CVGYCDSDFAGDLDKQRSTSGY 164

Query: 458 VFTLFGKTVS*KASLQHVVALSTTEAEYIGVTKAVKETLWLKGLVNELGINKNSVNVHCD 279
           VFTL G +VS ++ LQ  +ALSTTEAEYI  T+AVKE +WLKGL+ +LG+ + ++ V CD
Sbjct: 165 VFTLGGGSVSWRSILQSTIALSTTEAEYIAATEAVKEAIWLKGLLGDLGVIQENIAVFCD 224

Query: 278 NQSAIHLCKNQTSHERTKHIDIRLHWIKDIINEGKVQIRKIHTAHNPADFITKVVPLSKF 99
           NQSAI L KNQT H RTKHID++ H++++II  G V ++KI T  NP+D +TKVV   KF
Sbjct: 225 NQSAIFLAKNQTYHARTKHIDVKYHYVREIIEGGDVLLKKIDTKDNPSDMLTKVVSEVKF 284

Query: 98  RHCLNLLNV 72
           +HCL L+ +
Sbjct: 285 QHCLKLIQI 293


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score =  216 bits (551), Expect = 2e-61
 Identities = 107/188 (56%), Positives = 139/188 (73%)
 Frame = -2

Query: 635  PEQQHWLAVNSKHVLRYLKGSIKLGLSYHRSDLDSGGVVGYVDTDFAGDRDKRRSLTGYV 456
            P ++HW AV  K +LRYL+GS  L L Y +SD  S  V GYVD+D+AGD DKRRSLTGYV
Sbjct: 1655 PGKEHWQAV--KWILRYLRGSADLCLVYDQSDCTSS-VTGYVDSDYAGDLDKRRSLTGYV 1711

Query: 455  FTLFGKTVS*KASLQHVVALSTTEAEYIGVTKAVKETLWLKGLVNELGINKNSVNVHCDN 276
            FT  G  +S KA LQ  VALSTTEAEY+ + +AVKE LW+KGLV+ LG+ ++   V CD+
Sbjct: 1712 FTYSGGAISWKAVLQSTVALSTTEAEYMALAEAVKEALWMKGLVSSLGLQQDFTVVFCDS 1771

Query: 275  QSAIHLCKNQTSHERTKHIDIRLHWIKDIINEGKVQIRKIHTAHNPADFITKVVPLSKFR 96
            QSAIHL KNQ  HERTKHID+R H++++ + +G + I K+ T  NPAD +TKV+P  KF+
Sbjct: 1772 QSAIHLTKNQMFHERTKHIDVRYHFVREHVTQGDIVISKVATEKNPADMLTKVIPAYKFK 1831

Query: 95   HCLNLLNV 72
            HCL+L+ +
Sbjct: 1832 HCLDLIGI 1839


>gb|KYP36395.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 383

 Score =  204 bits (520), Expect = 4e-61
 Identities = 100/175 (57%), Positives = 129/175 (73%)
 Frame = -2

Query: 644 LANPEQQHWLAVNSKHVLRYLKGSIKLGLSYHRSDLDSGGVVGYVDTDFAGDRDKRRSLT 465
           +ANP Q HW A+  K + RYL G++  GL + RS  +   V+GYVD DFAG  D R+SLT
Sbjct: 106 MANPGQLHWNAL--KWLFRYLNGTLGCGLRFKRSHTEGDAVIGYVDADFAGCLDTRKSLT 163

Query: 464 GYVFTLFGKTVS*KASLQHVVALSTTEAEYIGVTKAVKETLWLKGLVNELGINKNSVNVH 285
           GYVFT+FG  V+ KA+LQ VV+LSTTEAEYI +T+  KE  WLKGL+ +LGIN++ V ++
Sbjct: 164 GYVFTMFGSAVTWKANLQSVVSLSTTEAEYIALTEGAKEGSWLKGLIGDLGINQSRVTIN 223

Query: 284 CDNQSAIHLCKNQTSHERTKHIDIRLHWIKDIINEGKVQIRKIHTAHNPADFITK 120
           CD+QSAIHL  + T HERTKHIDIR H+I+D+I   K+Q+ KI T  NPAD +TK
Sbjct: 224 CDSQSAIHLANHHTYHERTKHIDIRYHFIRDMIETRKIQVLKIATEDNPADMLTK 278


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  215 bits (548), Expect = 6e-61
 Identities = 107/186 (57%), Positives = 138/186 (74%)
 Frame = -2

Query: 635  PEQQHWLAVNSKHVLRYLKGSIKLGLSYHRSDLDSGGVVGYVDTDFAGDRDKRRSLTGYV 456
            P ++HW AV  K +LRYL+GS  L L Y +SD  S  V GYVD+D+AGD DKRRSLTGYV
Sbjct: 1634 PGKEHWQAV--KWILRYLRGSADLCLVYDQSDCTSS-VTGYVDSDYAGDLDKRRSLTGYV 1690

Query: 455  FTLFGKTVS*KASLQHVVALSTTEAEYIGVTKAVKETLWLKGLVNELGINKNSVNVHCDN 276
            FT  G  +S KA LQ  VALSTTEAEY+ + +AVKE LW+KGLV+ LG+ ++   V CD+
Sbjct: 1691 FTYSGGAISWKAVLQSTVALSTTEAEYMALAEAVKEALWMKGLVSSLGLQQDFTVVFCDS 1750

Query: 275  QSAIHLCKNQTSHERTKHIDIRLHWIKDIINEGKVQIRKIHTAHNPADFITKVVPLSKFR 96
            QSAIHL KNQ  HERTKHID+R H++++ + +G + I K+ T  NPAD +TKV+P  KF+
Sbjct: 1751 QSAIHLTKNQMFHERTKHIDVRYHFVREHVTQGDIVISKVATEKNPADMLTKVIPAYKFK 1810

Query: 95   HCLNLL 78
            HCL+L+
Sbjct: 1811 HCLDLI 1816