BLASTX nr result
ID: Astragalus24_contig00025008
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus24_contig00025008
(306 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020210320.1| pentatricopeptide repeat-containing protein ... 47 5e-07
gb|KYP73902.1| Putative pentatricopeptide repeat-containing prot... 47 5e-07
gb|KHN42800.1| Pentatricopeptide repeat-containing protein, chlo... 47 1e-06
ref|XP_006575303.1| PREDICTED: pentatricopeptide repeat-containi... 47 1e-06
gb|PNY14599.1| pentatricopeptide repeat-containing protein at1g0... 47 2e-06
ref|XP_013467967.1| organelle transcript processing protein, put... 48 4e-06
ref|XP_004515218.1| PREDICTED: pentatricopeptide repeat-containi... 49 4e-06
ref|XP_004515217.1| PREDICTED: pentatricopeptide repeat-containi... 49 4e-06
>ref|XP_020210320.1| pentatricopeptide repeat-containing protein At1g08070,
chloroplastic-like [Cajanus cajan]
Length = 573
Score = 47.4 bits (111), Expect(2) = 5e-07
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +2
Query: 86 VVLKYGLLLDHFVCASFVHMYAKFMVIEN 172
VVLK+GL LDHFVCAS V MYAK MV+E+
Sbjct: 126 VVLKHGLHLDHFVCASLVDMYAKCMVVED 154
Score = 33.9 bits (76), Expect(2) = 5e-07
Identities = 17/26 (65%), Positives = 18/26 (69%), Gaps = 6/26 (23%)
Frame = +1
Query: 1 LRCGVTPGNYTLPF------DYKNLQ 60
LRCGVTP NYTLPF D K+LQ
Sbjct: 93 LRCGVTPDNYTLPFVIRTSRDTKDLQ 118
>gb|KYP73902.1| Putative pentatricopeptide repeat-containing protein At3g23330
family [Cajanus cajan]
Length = 511
Score = 47.4 bits (111), Expect(2) = 5e-07
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +2
Query: 86 VVLKYGLLLDHFVCASFVHMYAKFMVIEN 172
VVLK+GL LDHFVCAS V MYAK MV+E+
Sbjct: 64 VVLKHGLHLDHFVCASLVDMYAKCMVVED 92
Score = 33.9 bits (76), Expect(2) = 5e-07
Identities = 17/26 (65%), Positives = 18/26 (69%), Gaps = 6/26 (23%)
Frame = +1
Query: 1 LRCGVTPGNYTLPF------DYKNLQ 60
LRCGVTP NYTLPF D K+LQ
Sbjct: 31 LRCGVTPDNYTLPFVIRTSRDTKDLQ 56
>gb|KHN42800.1| Pentatricopeptide repeat-containing protein, chloroplastic [Glycine
soja]
Length = 573
Score = 46.6 bits (109), Expect(2) = 1e-06
Identities = 25/48 (52%), Positives = 31/48 (64%), Gaps = 5/48 (10%)
Frame = +2
Query: 44 IIRICKDHFVTPTC-----VVLKYGLLLDHFVCASFVHMYAKFMVIEN 172
+IR C+D VVLK+GLL DHFVCAS V MYAK +V+E+
Sbjct: 107 VIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVED 154
Score = 33.1 bits (74), Expect(2) = 1e-06
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 1 LRCGVTPGNYTLPF 42
LRCGVTP NYTLPF
Sbjct: 93 LRCGVTPDNYTLPF 106
>ref|XP_006575303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
chloroplastic-like [Glycine max]
gb|KRH72271.1| hypothetical protein GLYMA_02G201800 [Glycine max]
Length = 573
Score = 46.6 bits (109), Expect(2) = 1e-06
Identities = 25/48 (52%), Positives = 31/48 (64%), Gaps = 5/48 (10%)
Frame = +2
Query: 44 IIRICKDHFVTPTC-----VVLKYGLLLDHFVCASFVHMYAKFMVIEN 172
+IR C+D VVLK+GLL DHFVCAS V MYAK +V+E+
Sbjct: 107 VIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVED 154
Score = 33.1 bits (74), Expect(2) = 1e-06
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 1 LRCGVTPGNYTLPF 42
LRCGVTP NYTLPF
Sbjct: 93 LRCGVTPDNYTLPF 106
>gb|PNY14599.1| pentatricopeptide repeat-containing protein at1g08070-like protein
[Trifolium pratense]
Length = 573
Score = 47.0 bits (110), Expect(2) = 2e-06
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +2
Query: 86 VVLKYGLLLDHFVCASFVHMYAKFMVIEN 172
VVLK+GL LDHFVCA+ V MYAK MVIE+
Sbjct: 126 VVLKHGLQLDHFVCATLVDMYAKCMVIED 154
Score = 32.3 bits (72), Expect(2) = 2e-06
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 1 LRCGVTPGNYTLPF 42
+RCGVTP NYTLPF
Sbjct: 93 IRCGVTPDNYTLPF 106
>ref|XP_013467967.1| organelle transcript processing protein, putative [Medicago
truncatula]
gb|KEH42004.1| organelle transcript processing protein, putative [Medicago
truncatula]
Length = 574
Score = 47.8 bits (112), Expect(2) = 4e-06
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +2
Query: 86 VVLKYGLLLDHFVCASFVHMYAKFMVIEN 172
VVLKYGL+LDHFVCA+ V MYAK VIE+
Sbjct: 126 VVLKYGLVLDHFVCATLVDMYAKCAVIED 154
Score = 30.4 bits (67), Expect(2) = 4e-06
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 1 LRCGVTPGNYTLPF 42
LRC +TP NYTLPF
Sbjct: 93 LRCNITPDNYTLPF 106
>ref|XP_004515218.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cicer arietinum]
Length = 573
Score = 49.3 bits (116), Expect(2) = 4e-06
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +2
Query: 86 VVLKYGLLLDHFVCASFVHMYAKFMVIEN 172
VVLK+GLLLDHFVCA+ V MYAK MVIE+
Sbjct: 126 VVLKHGLLLDHFVCATLVDMYAKCMVIED 154
Score = 28.9 bits (63), Expect(2) = 4e-06
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1
Query: 1 LRCGVTPGNYTLPF 42
LR GVTP NYTLPF
Sbjct: 93 LRYGVTPDNYTLPF 106
>ref|XP_004515217.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cicer arietinum]
Length = 573
Score = 49.3 bits (116), Expect(2) = 4e-06
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +2
Query: 86 VVLKYGLLLDHFVCASFVHMYAKFMVIEN 172
VVLK+GLLLDHFVCA+ V MYAK MVIE+
Sbjct: 126 VVLKHGLLLDHFVCATLVDMYAKCMVIED 154
Score = 28.9 bits (63), Expect(2) = 4e-06
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1
Query: 1 LRCGVTPGNYTLPF 42
LR GVTP NYTLPF
Sbjct: 93 LRYGVTPDNYTLPF 106