BLASTX nr result

ID: Astragalus24_contig00024804 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00024804
         (412 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013464511.1| sodium bile acid symporter family protein [M...    56   3e-06

>ref|XP_013464511.1| sodium bile acid symporter family protein [Medicago truncatula]
 gb|KEH38546.1| sodium bile acid symporter family protein [Medicago truncatula]
          Length = 681

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 40/80 (50%), Positives = 45/80 (56%)
 Frame = +1

Query: 4   ISVR*DQLQLPARYGLKPELAYCYLVQFIDAITVSPLRVTRSCNKG*LFCIFFCLCGIVN 183
           + VR +QL LPARYG K ELA       I AITV+ LRVTRSCN+  L  IFF L   VN
Sbjct: 231 VEVRYNQLLLPARYGPKLELAMLLFGSIIGAITVASLRVTRSCNREEL-QIFFVLFDGVN 289

Query: 184 YASKLDYCKKGFLFPSSAVV 243
              K  Y K  F F    V+
Sbjct: 290 ---KKIYAKISFTFLGKEVI 306


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