BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00022125
         (496 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNY18017.1| copia-type polyprotein [Trifolium pratense]            179   8e-50
gb|PNX70198.1| cationic amino acid transporter 1-like protein, p...   160   5e-47
gb|PNX61214.1| copia-type polyprotein, partial [Trifolium pratense]   162   6e-47
dbj|GAU42259.1| hypothetical protein TSUD_327370 [Trifolium subt...   172   1e-46
gb|PNX73153.1| hypothetical protein L195_g029051 [Trifolium prat...   160   2e-46
gb|PNX68532.1| copia-type polyprotein [Trifolium pratense]            159   3e-46
dbj|GAU37611.1| hypothetical protein TSUD_365320 [Trifolium subt...   169   4e-46
dbj|GAU35215.1| hypothetical protein TSUD_204910 [Trifolium subt...   168   2e-45
gb|KYP32045.1| Retrovirus-related Pol polyprotein from transposo...   160   4e-45
dbj|GAU50483.1| hypothetical protein TSUD_409690 [Trifolium subt...   167   4e-45
gb|PNX66461.1| hypothetical protein L195_g055105, partial [Trifo...   157   6e-45
dbj|GAU46965.1| hypothetical protein TSUD_143070 [Trifolium subt...   160   7e-45
dbj|GAU39052.1| hypothetical protein TSUD_396570 [Trifolium subt...   155   1e-44
gb|KYP66912.1| Retrovirus-related Pol polyprotein from transposo...   157   2e-44
gb|KYP76820.1| Copia protein [Cajanus cajan]                          154   2e-44
gb|KYP67250.1| Copia protein [Cajanus cajan]                          153   3e-44
dbj|GAU42845.1| hypothetical protein TSUD_387380 [Trifolium subt...   164   3e-44
gb|KYP66838.1| Retrovirus-related Pol polyprotein from transposo...   152   4e-44
dbj|GAU22332.1| hypothetical protein TSUD_106600 [Trifolium subt...   159   6e-44
dbj|GAU12596.1| hypothetical protein TSUD_132060 [Trifolium subt...   159   6e-44

>gb|PNY18017.1| copia-type polyprotein [Trifolium pratense]
          Length = 999

 Score =  179 bits (453), Expect(2) = 8e-50
 Identities = 91/155 (58%), Positives = 105/155 (67%), Gaps = 27/155 (17%)
 Frame = +3

Query: 3    DICFAVGAVSRHM---------------------------FPIKPVQNHAELIGYSDSDW 101
            DICF VG VSR M                           FPI       E++ YSD+DW
Sbjct: 792  DICFVVGLVSRFMEEPRKSHMNAARRVLRYIAGTLEFGILFPISARNAKPEIVCYSDADW 851

Query: 102  CGDKVDRRSTTGYVFMYHGAPISWCSKKQPVVALSSCEAEYIAGATAACQAIWLKSVLTE 281
            CGDK+DRRSTTGY F +  A ISWCS+KQPVVALSSCEAEYIAG+ AACQA+W++SVL E
Sbjct: 852  CGDKIDRRSTTGYFFKFMNASISWCSRKQPVVALSSCEAEYIAGSYAACQALWIESVLKE 911

Query: 282  LGIDIKRPIKLMIDNKSAIMLAKNAVSHGRSKHID 386
            L +D++RPIKL IDNKSAI LAKN V HGRSKHI+
Sbjct: 912  LKVDVERPIKLQIDNKSAINLAKNPVLHGRSKHIE 946



 Score = 46.2 bits (108), Expect(2) = 8e-50
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = +1

Query: 385  TKFHFLRDQVEKKLLEVCYCNTQVQIADVLTKALKIE 495
            T+FHFLR+QV +  LEV +C T  QIAD +TK+LK +
Sbjct: 947  TRFHFLREQVNQGSLEVIHCATGSQIADAMTKSLKTD 983


>gb|PNX70198.1| cationic amino acid transporter 1-like protein, partial [Trifolium
           pratense]
          Length = 199

 Score =  160 bits (406), Expect = 5e-47
 Identities = 83/155 (53%), Positives = 105/155 (67%), Gaps = 27/155 (17%)
 Frame = +3

Query: 3   DICFAVGAVSR--------HMFPIKPVQNHAE-------------------LIGYSDSDW 101
           D+ FAVGAVSR        HM  +K +  + +                   L G+S SD 
Sbjct: 14  DLAFAVGAVSRFVNSPKKSHMIAVKKIMRYVKGTMNYGILLPNTLSNAVNRLEGFSYSDR 73

Query: 102 CGDKVDRRSTTGYVFMYHGAPISWCSKKQPVVALSSCEAEYIAGATAACQAIWLKSVLTE 281
           CGD VDRRSTTGY+F +  APISWCSKKQPV+ALSSCEAEYIA A AACQ IWL+S+L +
Sbjct: 74  CGDHVDRRSTTGYIFKFLDAPISWCSKKQPVIALSSCEAEYIACAFAACQGIWLESLLKD 133

Query: 282 LGIDIKRPIKLMIDNKSAIMLAKNAVSHGRSKHID 386
           + I++  P++L++DNKSAI LA+N +SHGRSKHI+
Sbjct: 134 IKIELTEPMQLLVDNKSAINLARNPISHGRSKHIE 168


>gb|PNX61214.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 239

 Score =  162 bits (409), Expect = 6e-47
 Identities = 85/157 (54%), Positives = 99/157 (63%), Gaps = 27/157 (17%)
 Frame = +3

Query: 3   DICFAVGAVSRHM---------------------------FPIKPVQNHAELIGYSDSDW 101
           D CFA G VSR M                            P   V    E+I YSD DW
Sbjct: 49  DTCFAAGLVSRFMEDPRQSHMKAAMRISRYIADTLDFGILSPKSAVNAKLEIICYSDVDW 108

Query: 102 CGDKVDRRSTTGYVFMYHGAPISWCSKKQPVVALSSCEAEYIAGATAACQAIWLKSVLTE 281
           CGDKVDRRS TGY F Y  A ++WCS+KQPVVALSSCEA+YIAG+ AACQA+W+ SVL E
Sbjct: 109 CGDKVDRRSITGYFFKYLNASVAWCSRKQPVVALSSCEAKYIAGSYAACQALWINSVLKE 168

Query: 282 LGIDIKRPIKLMIDNKSAIMLAKNAVSHGRSKHIDKV 392
           L I++K+PI L I N+SAI LAKN V HGRSKHI+ +
Sbjct: 169 LKINVKKPITLQIXNQSAINLAKNPVLHGRSKHIEAI 205


>dbj|GAU42259.1| hypothetical protein TSUD_327370 [Trifolium subterraneum]
          Length = 1090

 Score =  172 bits (436), Expect = 1e-46
 Identities = 88/155 (56%), Positives = 103/155 (66%), Gaps = 27/155 (17%)
 Frame = +3

Query: 3    DICFAVGAVSRHM---------------------------FPIKPVQNHAELIGYSDSDW 101
            +ICFAVG VSR M                           FP        E++ YSD+DW
Sbjct: 864  NICFAVGLVSRFMEDPRESHMKADTRILRYIAGTPYYGILFPKSAKNTKLEIVCYSDADW 923

Query: 102  CGDKVDRRSTTGYVFMYHGAPISWCSKKQPVVALSSCEAEYIAGATAACQAIWLKSVLTE 281
            CGDKVDRRST GY F +  AP++WCS+KQPVVALSSCEAEYIAG+ AACQ +W+KSVL E
Sbjct: 924  CGDKVDRRSTPGYFFKFLKAPVAWCSRKQPVVALSSCEAEYIAGSYAACQTLWMKSVLEE 983

Query: 282  LGIDIKRPIKLMIDNKSAIMLAKNAVSHGRSKHID 386
            L ID+K+PI L IDN+SAI LAKN V HGRSKHI+
Sbjct: 984  LKIDVKKPITLQIDNQSAINLAKNPVLHGRSKHIE 1018


>gb|PNX73153.1| hypothetical protein L195_g029051 [Trifolium pratense]
          Length = 238

 Score =  160 bits (406), Expect = 2e-46
 Identities = 73/116 (62%), Positives = 93/116 (80%)
 Frame = +3

Query: 39  MFPIKPVQNHAELIGYSDSDWCGDKVDRRSTTGYVFMYHGAPISWCSKKQPVVALSSCEA 218
           +FP    ++ AEL+ YSDS+W GDK+DRRST+GYV +Y+GA ISWC+KK PV ALS+CEA
Sbjct: 91  LFPTGMKKDSAELVSYSDSNWGGDKIDRRSTSGYVMLYNGALISWCTKKHPVTALSTCEA 150

Query: 219 EYIAGATAACQAIWLKSVLTELGIDIKRPIKLMIDNKSAIMLAKNAVSHGRSKHID 386
           EYIA   + CQ IWL SV+ EL  ++K+P+KL+IDNKSAI L KN +SHGRSKHI+
Sbjct: 151 EYIAETFSTCQVIWLDSVMKELKCELKKPLKLLIDNKSAISLVKNPISHGRSKHIE 206


>gb|PNX68532.1| copia-type polyprotein [Trifolium pratense]
          Length = 194

 Score =  159 bits (401), Expect = 3e-46
 Identities = 75/116 (64%), Positives = 90/116 (77%)
 Frame = +3

Query: 39  MFPIKPVQNHAELIGYSDSDWCGDKVDRRSTTGYVFMYHGAPISWCSKKQPVVALSSCEA 218
           +FP     +   L  YSDSDW GD  DRRST+GYV +Y+GA I+WC+KKQPV ALS+CEA
Sbjct: 28  LFPTGLKDDCESLSSYSDSDWGGDATDRRSTSGYVMLYNGASIAWCTKKQPVTALSTCEA 87

Query: 219 EYIAGATAACQAIWLKSVLTELGIDIKRPIKLMIDNKSAIMLAKNAVSHGRSKHID 386
           EYIAG  A CQ +WL SVL EL  ++++P+KLMIDNKSAI LAKN VSHGRSKHI+
Sbjct: 88  EYIAGTFATCQMVWLDSVLRELKCELQKPLKLMIDNKSAINLAKNPVSHGRSKHIE 143


>dbj|GAU37611.1| hypothetical protein TSUD_365320 [Trifolium subterraneum]
          Length = 718

 Score =  169 bits (429), Expect = 4e-46
 Identities = 86/155 (55%), Positives = 107/155 (69%), Gaps = 27/155 (17%)
 Frame = +3

Query: 3   DICFAVGAVSR--------HMFPIKPVQNHAE-------------------LIGYSDSDW 101
           D+ FAVGAVSR        HM  +K +  + +                   L G+SDSDW
Sbjct: 508 DLSFAVGAVSRFVESPKQSHMVAVKRILRYVQGTMEFGVLFPNNISNSVNRLEGFSDSDW 567

Query: 102 CGDKVDRRSTTGYVFMYHGAPISWCSKKQPVVALSSCEAEYIAGATAACQAIWLKSVLTE 281
           CGD VDRRSTTGY+F +  APISWCSKKQPV+ALSSCEAEYIA A AACQ IWL+S+L +
Sbjct: 568 CGDHVDRRSTTGYIFKFLHAPISWCSKKQPVIALSSCEAEYIACAFAACQGIWLESLLKD 627

Query: 282 LGIDIKRPIKLMIDNKSAIMLAKNAVSHGRSKHID 386
           + +++  PI+L++DNKSAI LAKN +SHGRSKHI+
Sbjct: 628 IQVELTEPIQLLVDNKSAINLAKNPISHGRSKHIE 662


>dbj|GAU35215.1| hypothetical protein TSUD_204910 [Trifolium subterraneum]
          Length = 1149

 Score =  168 bits (425), Expect(2) = 2e-45
 Identities = 85/155 (54%), Positives = 106/155 (68%), Gaps = 27/155 (17%)
 Frame = +3

Query: 3    DICFAVGAVSR--------HMFPIKPVQNHAE-------------------LIGYSDSDW 101
            D+ FAVG VSR        HM  +K +  + +                   L G+SDSDW
Sbjct: 939  DLSFAVGVVSRFVESPKQSHMVAVKRILRYVQGTMEFGVLFPNNISNSVNKLEGFSDSDW 998

Query: 102  CGDKVDRRSTTGYVFMYHGAPISWCSKKQPVVALSSCEAEYIAGATAACQAIWLKSVLTE 281
            CGD VDRRSTTGY+F +  APISWCSKKQPV+ALSSCEAEYIA A AACQ IWL+S+L +
Sbjct: 999  CGDHVDRRSTTGYIFKFLHAPISWCSKKQPVIALSSCEAEYIACAFAACQGIWLESLLKD 1058

Query: 282  LGIDIKRPIKLMIDNKSAIMLAKNAVSHGRSKHID 386
            + +++  PI+L++DNKSAI LAKN +SHGRSKHI+
Sbjct: 1059 IQVELTEPIQLLVDNKSAINLAKNPISHGRSKHIE 1093



 Score = 42.0 bits (97), Expect(2) = 2e-45
 Identities = 18/35 (51%), Positives = 26/35 (74%)
 Frame = +1

Query: 385  TKFHFLRDQVEKKLLEVCYCNTQVQIADVLTKALK 489
            T+FHF+R+QV    + + +C T+VQ AD+LTK LK
Sbjct: 1094 TRFHFIREQVNNGRIVLKHCPTEVQEADILTKGLK 1128


>gb|KYP32045.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1205

 Score =  160 bits (404), Expect(2) = 4e-45
 Identities = 75/116 (64%), Positives = 92/116 (79%)
 Frame = +3

Query: 39   MFPIKPVQNHAELIGYSDSDWCGDKVDRRSTTGYVFMYHGAPISWCSKKQPVVALSSCEA 218
            MFP K    +  ++GYSD+DWCGDK DR+STTGYVFM   APISWCS+KQ VVALSSCEA
Sbjct: 1035 MFPNKFSSPNHNMVGYSDADWCGDKADRKSTTGYVFMLGDAPISWCSRKQSVVALSSCEA 1094

Query: 219  EYIAGATAACQAIWLKSVLTELGIDIKRPIKLMIDNKSAIMLAKNAVSHGRSKHID 386
            EYIA +  ACQA+WL+++L EL  + +  + LM+DNKSAI LAKN V+HGRSKHI+
Sbjct: 1095 EYIAASMGACQALWLETLLEELKTETEEGMLLMVDNKSAINLAKNPVAHGRSKHIE 1150



 Score = 49.3 bits (116), Expect(2) = 4e-45
 Identities = 21/37 (56%), Positives = 30/37 (81%)
 Frame = +1

Query: 385  TKFHFLRDQVEKKLLEVCYCNTQVQIADVLTKALKIE 495
            T+FHFLRDQ+ K+ L++ +C ++ QIAD+LTK LK E
Sbjct: 1151 TRFHFLRDQISKRKLKLEFCRSESQIADILTKPLKKE 1187


>dbj|GAU50483.1| hypothetical protein TSUD_409690 [Trifolium subterraneum]
          Length = 1073

 Score =  167 bits (423), Expect(2) = 4e-45
 Identities = 85/155 (54%), Positives = 106/155 (68%), Gaps = 27/155 (17%)
 Frame = +3

Query: 3    DICFAVGAVSR--------HMFPIKPVQNHAE-------------------LIGYSDSDW 101
            D+ FAVGAVSR        HM  +K +  + +                   L G+SDSDW
Sbjct: 863  DLSFAVGAVSRFVESPKQSHMVAVKRILRYVQGTMEFGVLFPNNISNSVNRLEGFSDSDW 922

Query: 102  CGDKVDRRSTTGYVFMYHGAPISWCSKKQPVVALSSCEAEYIAGATAACQAIWLKSVLTE 281
            CGD VDRRSTTGY+F +  APISWCSKKQPV+ALSSCEAEYIA   AACQ IWL+S+L +
Sbjct: 923  CGDHVDRRSTTGYIFKFLHAPISWCSKKQPVIALSSCEAEYIACDFAACQGIWLESLLKD 982

Query: 282  LGIDIKRPIKLMIDNKSAIMLAKNAVSHGRSKHID 386
            + +++  PI+L++DNKSAI LAKN +SHGRSKHI+
Sbjct: 983  IQVELTEPIQLLVDNKSAINLAKNPISHGRSKHIE 1017



 Score = 42.0 bits (97), Expect(2) = 4e-45
 Identities = 18/35 (51%), Positives = 26/35 (74%)
 Frame = +1

Query: 385  TKFHFLRDQVEKKLLEVCYCNTQVQIADVLTKALK 489
            T+FHF+R+QV    + + +C T+VQ AD+LTK LK
Sbjct: 1018 TRFHFIREQVNNGRIVLNHCPTEVQEADILTKGLK 1052


>gb|PNX66461.1| hypothetical protein L195_g055105, partial [Trifolium pratense]
          Length = 254

 Score =  157 bits (397), Expect = 6e-45
 Identities = 75/116 (64%), Positives = 90/116 (77%)
 Frame = +3

Query: 39  MFPIKPVQNHAELIGYSDSDWCGDKVDRRSTTGYVFMYHGAPISWCSKKQPVVALSSCEA 218
           +FP        EL G+SD+DWCGDKVDRRST+GY+F +  AP+SWCSKKQ V+ALSSCEA
Sbjct: 86  LFPYSKDSVKLELNGFSDADWCGDKVDRRSTSGYLFKFQNAPVSWCSKKQSVIALSSCEA 145

Query: 219 EYIAGATAACQAIWLKSVLTELGIDIKRPIKLMIDNKSAIMLAKNAVSHGRSKHID 386
           EY+AG+ AACQA WL+S+L E+ I     I L IDNKSAI LAKN VSHG+SKHI+
Sbjct: 146 EYVAGSLAACQANWLQSLLNEMKIIDNITIMLKIDNKSAINLAKNPVSHGKSKHIE 201


>dbj|GAU46965.1| hypothetical protein TSUD_143070 [Trifolium subterraneum]
          Length = 1119

 Score =  160 bits (404), Expect(2) = 7e-45
 Identities = 83/155 (53%), Positives = 102/155 (65%), Gaps = 27/155 (17%)
 Frame = +3

Query: 3    DICFAVGAVSRHM---------------------------FPIKPVQNHAELIGYSDSDW 101
            DI +AVG VSR M                           +P     +  EL G+SD+DW
Sbjct: 910  DIIYAVGYVSRFMSNPLKSHLLAAKRILRYINGTIHYGVLYPYARDSSKLELNGFSDADW 969

Query: 102  CGDKVDRRSTTGYVFMYHGAPISWCSKKQPVVALSSCEAEYIAGATAACQAIWLKSVLTE 281
            CGDKVDRRST+GYVF +  AP+SWCSKKQ V+ALSSCEAEY+AG+ AACQA WL+S+L+E
Sbjct: 970  CGDKVDRRSTSGYVFKFQNAPVSWCSKKQSVIALSSCEAEYVAGSLAACQANWLQSLLSE 1029

Query: 282  LGIDIKRPIKLMIDNKSAIMLAKNAVSHGRSKHID 386
            + I     + L IDNKSAI LAKN+VSHG+SKHI+
Sbjct: 1030 MKITNNITVMLKIDNKSAINLAKNSVSHGKSKHIE 1064



 Score = 48.5 bits (114), Expect(2) = 7e-45
 Identities = 23/43 (53%), Positives = 30/43 (69%)
 Frame = +1

Query: 361  HMDAANTLTKFHFLRDQVEKKLLEVCYCNTQVQIADVLTKALK 489
            H  + +  T+FHFLRDQV K  L + YC+T  Q AD+LTKA+K
Sbjct: 1057 HGKSKHIETRFHFLRDQVNKGKLSLKYCSTNDQQADILTKAMK 1099


>dbj|GAU39052.1| hypothetical protein TSUD_396570 [Trifolium subterraneum]
          Length = 1309

 Score =  155 bits (391), Expect(2) = 1e-44
 Identities = 79/155 (50%), Positives = 101/155 (65%), Gaps = 27/155 (17%)
 Frame = +3

Query: 3    DICFAVGAVSRHM---------------------------FPIKPVQNHAELIGYSDSDW 101
            DI +AVG+VSR M                           FP    ++  EL G+SDSDW
Sbjct: 1100 DINYAVGSVSRFMSNPKASHMVAAKRILRYLKGTKDFGLVFPTNNKESKIELEGFSDSDW 1159

Query: 102  CGDKVDRRSTTGYVFMYHGAPISWCSKKQPVVALSSCEAEYIAGATAACQAIWLKSVLTE 281
            CGDK DRRS +GY F +  +PISW S+KQ +VALSSC+AEY+A A AACQA+WL+S+L E
Sbjct: 1160 CGDKDDRRSKSGYWFRFKNSPISWSSRKQSIVALSSCDAEYVAAAQAACQAVWLESLLDE 1219

Query: 282  LGIDIKRPIKLMIDNKSAIMLAKNAVSHGRSKHID 386
            L I   +P+KL +DNKSAI LA+N ++HGRSKHI+
Sbjct: 1220 LKIKYVKPVKLNVDNKSAISLARNPIAHGRSKHIE 1254



 Score = 52.8 bits (125), Expect(2) = 1e-44
 Identities = 24/37 (64%), Positives = 29/37 (78%)
 Frame = +1

Query: 385  TKFHFLRDQVEKKLLEVCYCNTQVQIADVLTKALKIE 495
            TK+HFLRDQV K+ L V YC T VQIAD+LTK L+ +
Sbjct: 1255 TKYHFLRDQVSKEKLTVEYCKTDVQIADILTKPLRAD 1291


>gb|KYP66912.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 861

 Score =  157 bits (398), Expect(2) = 2e-44
 Identities = 74/116 (63%), Positives = 92/116 (79%)
 Frame = +3

Query: 39   MFPIKPVQNHAELIGYSDSDWCGDKVDRRSTTGYVFMYHGAPISWCSKKQPVVALSSCEA 218
            MFP K    +  ++GYSD+DWCGDK DR+STTGYVFM   APISWCS+KQ VV LSSCEA
Sbjct: 691  MFPNKFSCPNHNMVGYSDADWCGDKADRKSTTGYVFMLGDAPISWCSRKQSVVPLSSCEA 750

Query: 219  EYIAGATAACQAIWLKSVLTELGIDIKRPIKLMIDNKSAIMLAKNAVSHGRSKHID 386
            EYIA +  ACQA+WL+++L EL I+ +  + LM+DNKS+I LAKN V+HGRSKHI+
Sbjct: 751  EYIAASMGACQALWLETLLEELKIETEEGMLLMVDNKSSINLAKNPVAHGRSKHIE 806



 Score = 49.3 bits (116), Expect(2) = 2e-44
 Identities = 21/37 (56%), Positives = 30/37 (81%)
 Frame = +1

Query: 385 TKFHFLRDQVEKKLLEVCYCNTQVQIADVLTKALKIE 495
           T+FHFLRDQ+ K+ L++ +C ++ QIAD+LTK LK E
Sbjct: 807 TRFHFLRDQISKRKLKLEFCRSESQIADILTKPLKKE 843


>gb|KYP76820.1| Copia protein [Cajanus cajan]
          Length = 189

 Score =  154 bits (388), Expect(2) = 2e-44
 Identities = 71/117 (60%), Positives = 89/117 (76%)
 Frame = +3

Query: 39  MFPIKPVQNHAELIGYSDSDWCGDKVDRRSTTGYVFMYHGAPISWCSKKQPVVALSSCEA 218
           +FP    +   +L+ YSDSDWCGDK DR+ST  Y+F Y GAPISW S K+PVVALSSCEA
Sbjct: 28  LFPKGKGEIEEKLVAYSDSDWCGDKSDRKSTARYIFFYGGAPISWSSSKEPVVALSSCEA 87

Query: 219 EYIAGATAACQAIWLKSVLTELGIDIKRPIKLMIDNKSAIMLAKNAVSHGRSKHIDK 389
           EYIA + AACQA+WL +++ EL ++    +KL++DNKSAI LAK+   HGRSKHIDK
Sbjct: 88  EYIAASEAACQAVWLDALMKELQVEHLNKVKLLVDNKSAIDLAKHTTVHGRSKHIDK 144



 Score = 53.1 bits (126), Expect(2) = 2e-44
 Identities = 22/38 (57%), Positives = 32/38 (84%)
 Frame = +1

Query: 379 TLTKFHFLRDQVEKKLLEVCYCNTQVQIADVLTKALKI 492
           T T+FH+LR+QV K+ LE+ +C T++Q AD+LTKALK+
Sbjct: 152 TETRFHYLREQVSKEKLEIEHCGTEIQFADILTKALKL 189


>gb|KYP67250.1| Copia protein [Cajanus cajan]
          Length = 178

 Score =  153 bits (386), Expect = 3e-44
 Identities = 71/104 (68%), Positives = 85/104 (81%)
 Frame = +3

Query: 75  LIGYSDSDWCGDKVDRRSTTGYVFMYHGAPISWCSKKQPVVALSSCEAEYIAGATAACQA 254
           L+ YSDSDWCGD VDRRSTTG VF+  G+PISW SKKQ VVALS+CEAEYIA   AACQA
Sbjct: 41  LVAYSDSDWCGDLVDRRSTTGQVFLLSGSPISWSSKKQTVVALSTCEAEYIAACLAACQA 100

Query: 255 IWLKSVLTELGIDIKRPIKLMIDNKSAIMLAKNAVSHGRSKHID 386
           +WL S+L+EL + +   ++L++D+KS I LAKN VSHGRSKHID
Sbjct: 101 LWLSSLLSELKVSVDNGVELLVDSKSTIDLAKNPVSHGRSKHID 144


>dbj|GAU42845.1| hypothetical protein TSUD_387380 [Trifolium subterraneum]
          Length = 1239

 Score =  164 bits (416), Expect(2) = 3e-44
 Identities = 85/155 (54%), Positives = 106/155 (68%), Gaps = 27/155 (17%)
 Frame = +3

Query: 3    DICFAVGAVSR--------HMFPIKPVQNHAE-------------------LIGYSDSDW 101
            D+ FAVGAVSR        HM  +K +  + +                   L G+SDSDW
Sbjct: 1029 DLSFAVGAVSRFVESPKQSHMVAVKRILRYVQGTMEFGVLFPNNISNSVNRLEGFSDSDW 1088

Query: 102  CGDKVDRRSTTGYVFMYHGAPISWCSKKQPVVALSSCEAEYIAGATAACQAIWLKSVLTE 281
            CGD VDRRSTTGY+F +  APISWCSKKQPV+ALSSCEAEYIA A AACQ I L+S+L +
Sbjct: 1089 CGDHVDRRSTTGYIFKFLHAPISWCSKKQPVIALSSCEAEYIACAFAACQGIGLESLLKD 1148

Query: 282  LGIDIKRPIKLMIDNKSAIMLAKNAVSHGRSKHID 386
            + +++  PI+L++DNKSAI LAKN +SHGRSKHI+
Sbjct: 1149 IQVELTEPIQLLVDNKSAINLAKNPISHGRSKHIE 1183



 Score = 41.6 bits (96), Expect(2) = 3e-44
 Identities = 18/35 (51%), Positives = 26/35 (74%)
 Frame = +1

Query: 385  TKFHFLRDQVEKKLLEVCYCNTQVQIADVLTKALK 489
            T+FHF+R+QV    + + +C T+VQ AD+LTK LK
Sbjct: 1184 TRFHFIREQVNNGRIILNHCPTEVQEADILTKGLK 1218


>gb|KYP66838.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1317

 Score =  152 bits (385), Expect(2) = 4e-44
 Identities = 70/104 (67%), Positives = 86/104 (82%)
 Frame = +3

Query: 75   LIGYSDSDWCGDKVDRRSTTGYVFMYHGAPISWCSKKQPVVALSSCEAEYIAGATAACQA 254
            L+ YSDSDWCGD VDRRST G VF++ G+PISW SKKQ VV LS+CEAEYIA  +AACQA
Sbjct: 1163 LVAYSDSDWCGDLVDRRSTMGQVFLFSGSPISWSSKKQTVVVLSTCEAEYIAACSAACQA 1222

Query: 255  IWLKSVLTELGIDIKRPIKLMIDNKSAIMLAKNAVSHGRSKHID 386
            +WL S+L+EL + +   ++L++D+KSAI LAKN VSHGRSKHID
Sbjct: 1223 LWLSSLLSELKVSVDSGVELLVDSKSAIDLAKNPVSHGRSKHID 1266



 Score = 53.1 bits (126), Expect(2) = 4e-44
 Identities = 22/37 (59%), Positives = 32/37 (86%)
 Frame = +1

Query: 385  TKFHFLRDQVEKKLLEVCYCNTQVQIADVLTKALKIE 495
            TK+HFLRDQV K  +++ +C T+VQ+AD++TK+LKIE
Sbjct: 1267 TKYHFLRDQVSKGRIKLKHCRTEVQLADIMTKSLKIE 1303


>dbj|GAU22332.1| hypothetical protein TSUD_106600 [Trifolium subterraneum]
          Length = 1171

 Score =  159 bits (401), Expect(2) = 6e-44
 Identities = 75/116 (64%), Positives = 91/116 (78%)
 Frame = +3

Query: 39   MFPIKPVQNHAELIGYSDSDWCGDKVDRRSTTGYVFMYHGAPISWCSKKQPVVALSSCEA 218
            +FP     +  EL G+SD+DWCGDKVDRRST+GYVF +  AP+SWCSKKQ V+ALSSCEA
Sbjct: 1001 LFPYSRDSSKLELNGFSDADWCGDKVDRRSTSGYVFKFQSAPVSWCSKKQSVIALSSCEA 1060

Query: 219  EYIAGATAACQAIWLKSVLTELGIDIKRPIKLMIDNKSAIMLAKNAVSHGRSKHID 386
            EY+AG+ AACQA W++S+L E+ I     I L IDNKSAI LAKN VSHG+SKHI+
Sbjct: 1061 EYVAGSLAACQANWMQSLLNEMKIIDNITIMLKIDNKSAINLAKNPVSHGKSKHIE 1116



 Score = 46.6 bits (109), Expect(2) = 6e-44
 Identities = 22/43 (51%), Positives = 30/43 (69%)
 Frame = +1

Query: 361  HMDAANTLTKFHFLRDQVEKKLLEVCYCNTQVQIADVLTKALK 489
            H  + +  T+FHFLRDQV K  L + YC+T  Q AD+LTK++K
Sbjct: 1109 HGKSKHIETRFHFLRDQVNKGKLSLEYCSTNDQQADILTKSVK 1151


>dbj|GAU12596.1| hypothetical protein TSUD_132060 [Trifolium subterraneum]
          Length = 1096

 Score =  159 bits (401), Expect(2) = 6e-44
 Identities = 83/155 (53%), Positives = 100/155 (64%), Gaps = 27/155 (17%)
 Frame = +3

Query: 3    DICFAVGAVSRHM---------------------------FPIKPVQNHAELIGYSDSDW 101
            DI +AVG VSR M                           FP     +  EL G+SD+DW
Sbjct: 887  DISYAVGYVSRFMSKPLKSYLLAAKRILRYINGTIHYGVLFPYSRDSSKLELNGFSDADW 946

Query: 102  CGDKVDRRSTTGYVFMYHGAPISWCSKKQPVVALSSCEAEYIAGATAACQAIWLKSVLTE 281
            CGDKVDRRST+GYVF +  AP+SWCSKKQ V+ LSSCEAEY+AG+ AACQA WL+S+L+E
Sbjct: 947  CGDKVDRRSTSGYVFKFQNAPVSWCSKKQSVIVLSSCEAEYVAGSLAACQANWLQSLLSE 1006

Query: 282  LGIDIKRPIKLMIDNKSAIMLAKNAVSHGRSKHID 386
            + I     + L IDNKSAI LAKN VSHG+SKHI+
Sbjct: 1007 MKITDNITVMLKIDNKSAINLAKNHVSHGKSKHIE 1041



 Score = 46.6 bits (109), Expect(2) = 6e-44
 Identities = 23/43 (53%), Positives = 29/43 (67%)
 Frame = +1

Query: 361  HMDAANTLTKFHFLRDQVEKKLLEVCYCNTQVQIADVLTKALK 489
            H  + +  T FHFLRDQV K  L + YC+T  Q AD+LTKA+K
Sbjct: 1034 HGKSKHIETMFHFLRDQVNKGKLSLEYCSTNDQHADILTKAVK 1076