BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00021840
         (459 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP77525.1| Retrovirus-related Pol polyprotein LINE-1, partia...    61   5e-08
gb|ACN78497.1| putative reverse transcriptase [Arachis hypogaea]       57   2e-06

>gb|KYP77525.1| Retrovirus-related Pol polyprotein LINE-1, partial [Cajanus cajan]
          Length = 366

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 38/103 (36%), Positives = 52/103 (50%)
 Frame = +3

Query: 3   LHKIMNNIITEKVGMPSIVQKIVESHLRWFGYLQRRIAKASVTGGFCSWKIIQ*L*VPGE 182
           + +I N+ I EKVG+  IV+K+VE+ LRWFG++QRR  +A V                  
Sbjct: 269 MDRIRNDYIREKVGVAPIVEKLVETRLRWFGHVQRRPEEAPVR----------------- 311

Query: 183 QGKFYVKSLREI*INVLQLEDNPIVRGTGRTRKILCQIIKRDL 311
                          V Q+EDN I RG GR +K + + IKRDL
Sbjct: 312 --------------RVDQMEDNLITRGRGRPKKTIGETIKRDL 340


>gb|ACN78497.1| putative reverse transcriptase [Arachis hypogaea]
          Length = 515

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 36/106 (33%), Positives = 52/106 (49%)
 Frame = +3

Query: 3   LHKIMNNIITEKVGMPSIVQKIVESHLRWFGYLQRRIAKASVTGGFCSWKIIQ*L*VPGE 182
           L KI N  I E+VG+ SIV+K+VESHL WFG+++RR  K  V                  
Sbjct: 136 LDKIRNEDIRERVGVASIVKKMVESHLWWFGHVRRRPTKHLVR----------------- 178

Query: 183 QGKFYVKSLREI*INVLQLEDNPIVRGTGRTRKILCQIIKRDLDQC 320
                          V ++ED   V+  GR++K + +++KRDL  C
Sbjct: 179 --------------RVDEMEDGQGVKCRGRSKKTIHELVKRDLHHC 210