BLASTX nr result

ID: Astragalus24_contig00020166 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00020166
         (302 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNY15014.1| splicing factor U2af large subunit B-like protein...    56   6e-07

>gb|PNY15014.1| splicing factor U2af large subunit B-like protein [Trifolium
           pratense]
          Length = 592

 Score = 56.2 bits (134), Expect = 6e-07
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = -1

Query: 194 MTEEGIMIERKGVNVGLALDLLHHQGIKLSLEQGHVLARK 75
           +TEEGIMIERKG++VGL LDL H   I LS+EQGH LA++
Sbjct: 91  ITEEGIMIERKGISVGLGLDLFHLLRIDLSMEQGHGLAQR 130


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