BLASTX nr result

ID: Astragalus24_contig00019621 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00019621
         (971 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590171.1| transmembrane protein, putative [Medicago tr...    58   4e-06

>ref|XP_003590171.1| transmembrane protein, putative [Medicago truncatula]
 gb|AES60422.1| transmembrane protein, putative [Medicago truncatula]
          Length = 209

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 48/138 (34%), Positives = 62/138 (44%)
 Frame = +3

Query: 360 FMFICSMFLSFCIPCFYVWFVFLVLSYVILCLVVVWLKFTFRVFAEMPLHLWLFWNGWLH 539
           F FI  MF      C ++ F  ++  Y   CL  V +    ++F +MP   W FW   + 
Sbjct: 78  FSFIVVMF-----DCIFLCFSCVMFFYFCSCLCFVMV--AQKLFVKMPQWCWTFWTRVMC 130

Query: 540 PDSSRARIWVNTNNLINPSYRQDAIIIVVCLDYRETTHSRTVHIPVK*MIHN*IDSKIVD 719
                A + V  NNL   S +Q     VV L   ETT+SR V   VK MI N ID K VD
Sbjct: 131 -----AYLKVAANNLYLFSTKQMDSKFVVSLTNFETTYSRYVLAKVKEMILNWIDKKTVD 185

Query: 720 SPSLLAIYHMRKPFAWLI 773
                   H+RK   W+I
Sbjct: 186 LLFSFVNDHLRKKLVWVI 203


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