BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00019587
         (705 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX63257.1| retrovirus-related Pol polyprotein from transposo...   195   1e-58
gb|PNY10805.1| histone deacetylase, partial [Trifolium pratense]      203   2e-57
gb|PNX63176.1| retrovirus-related Pol polyprotein from transposo...   192   4e-57
gb|PNY10806.1| histone deacetylase [Trifolium pratense]               203   2e-56
dbj|GAU15285.1| hypothetical protein TSUD_03520 [Trifolium subte...   189   7e-55
gb|PNX56029.1| retrovirus-related Pol polyprotein from transposo...   182   8e-54
gb|PNX57709.1| retrovirus-related Pol polyprotein from transposo...   181   2e-53
gb|PNX90864.1| retrovirus-related Pol polyprotein from transposo...   181   1e-51
dbj|GAU20748.1| hypothetical protein TSUD_231620 [Trifolium subt...   174   2e-49
gb|PNX89801.1| retrovirus-related Pol polyprotein from transposo...   176   2e-49
gb|PNX89792.1| retrovirus-related Pol polyprotein from transposo...   174   6e-49
gb|PNX82441.1| retrovirus-related Pol polyprotein from transposo...   177   1e-48
gb|PNX79340.1| retrovirus-related Pol polyprotein from transposo...   177   1e-48
dbj|GAU44321.1| hypothetical protein TSUD_305020 [Trifolium subt...   174   3e-48
dbj|GAU19342.1| hypothetical protein TSUD_336290 [Trifolium subt...   179   7e-48
gb|PNX99033.1| retrovirus-related Pol polyprotein from transposo...   178   1e-47
gb|PNX84343.1| retrovirus-related Pol polyprotein from transposo...   173   3e-47
gb|PNX93770.1| histone deacetylase [Trifolium pratense]               177   3e-47
gb|PNX93258.1| histone deacetylase, partial [Trifolium pratense]      177   4e-47
dbj|GAU30708.1| hypothetical protein TSUD_39320 [Trifolium subte...   176   8e-47

>gb|PNX63257.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 247

 Score =  195 bits (495), Expect = 1e-58
 Identities = 97/190 (51%), Positives = 130/190 (68%), Gaps = 1/190 (0%)
 Frame = -1

Query: 567 SQTASIFQANGAWNTSSFIT-GPKLSIKLDDKNFLI*NQQVEGVVVNHKLHRQFVNPVIP 391
           S +  +   + + N S  +   PKLSIKLDDKNFL+ NQQVEGV++++KLHR  VNP IP
Sbjct: 2   SSSPFLVGGSSSGNNSGVVNFAPKLSIKLDDKNFLLWNQQVEGVILSNKLHRFVVNPEIP 61

Query: 390 QKFHSTADRAINKVSDAYDQWFVQDQALFTWLLPTLSDLVLPRVLNCHHAHQVWDTIHKH 211
            K++S +DR ++ VS+AYD+W VQDQ LFTWLL TL++ VLPR + C HA QVW+ IHK+
Sbjct: 62  AKYNSESDRELDIVSEAYDKWIVQDQMLFTWLLSTLAESVLPRTIGCCHAFQVWEQIHKY 121

Query: 210 YLAHLKAKMRQRSAELKNTKKRTXXXXXXXXXXXXXXXXXXXIGDNISDQDLVDIVLDGL 31
           + AHLKAK+RQ  +ELK  KK T                   +GD++++QD +D +LDGL
Sbjct: 122 FNAHLKAKVRQLRSELKTIKKGTKTITEFVLRVRAIADTLLSVGDSVTEQDQIDSILDGL 181

Query: 30  PEEYNSLVML 1
           PEEYN  VM+
Sbjct: 182 PEEYNPFVMM 191


>gb|PNY10805.1| histone deacetylase, partial [Trifolium pratense]
          Length = 720

 Score =  203 bits (517), Expect = 2e-57
 Identities = 100/185 (54%), Positives = 129/185 (69%)
 Frame = -1

Query: 555 SIFQANGAWNTSSFITGPKLSIKLDDKNFLI*NQQVEGVVVNHKLHRQFVNPVIPQKFHS 376
           S+ ++ G+ ++      PKLSIKLDDKN+L+ NQQVEGV++ HKLH+  VNP IP K+ S
Sbjct: 9   SVGESTGSSSSGKVSFAPKLSIKLDDKNYLLWNQQVEGVILAHKLHKFVVNPQIPMKYAS 68

Query: 375 TADRAINKVSDAYDQWFVQDQALFTWLLPTLSDLVLPRVLNCHHAHQVWDTIHKHYLAHL 196
            +DR ++KV+DAYDQW VQDQ LFTWLL TL++ VLPR + C HA QVWD IHK++ AHL
Sbjct: 69  ESDRLLDKVTDAYDQWLVQDQMLFTWLLSTLAESVLPRTVGCRHAFQVWDQIHKYFDAHL 128

Query: 195 KAKMRQRSAELKNTKKRTXXXXXXXXXXXXXXXXXXXIGDNISDQDLVDIVLDGLPEEYN 16
           KAK+RQ  +ELK  KK T                   IGD+IS+QD +D +L+GLPEEYN
Sbjct: 129 KAKVRQLRSELKTVKKGTKSISEFVLRVRAIADTLISIGDSISEQDQIDSILEGLPEEYN 188

Query: 15  SLVML 1
             VM+
Sbjct: 189 PFVMM 193


>gb|PNX63176.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 273

 Score =  192 bits (487), Expect = 4e-57
 Identities = 97/187 (51%), Positives = 126/187 (67%), Gaps = 2/187 (1%)
 Frame = -1

Query: 555 SIFQANGAWNTSSFIT--GPKLSIKLDDKNFLI*NQQVEGVVVNHKLHRQFVNPVIPQKF 382
           S+F  + +   SS      PKLSIKLD+KNFL+ +QQVEGV+++HKLHR  VNP IP K+
Sbjct: 29  SVFAGSSSEGQSSTAVHFAPKLSIKLDEKNFLLWHQQVEGVIISHKLHRFVVNPQIPAKY 88

Query: 381 HSTADRAINKVSDAYDQWFVQDQALFTWLLPTLSDLVLPRVLNCHHAHQVWDTIHKHYLA 202
            S ADR +++VS AYD+W VQDQ LFTWLL TL++ VLPR ++C HA QVW+ IH ++ A
Sbjct: 89  DSEADRELDEVSAAYDKWLVQDQMLFTWLLSTLAESVLPRTISCRHAFQVWEEIHNYFNA 148

Query: 201 HLKAKMRQRSAELKNTKKRTXXXXXXXXXXXXXXXXXXXIGDNISDQDLVDIVLDGLPEE 22
             KAK+RQ  +ELK  KK T                   IGD++S+QD +D +LDGLPEE
Sbjct: 149 QTKAKIRQLRSELKTVKKGTKTITEFILRVRAVANTLISIGDSVSEQDQIDSILDGLPEE 208

Query: 21  YNSLVML 1
           YN  VM+
Sbjct: 209 YNPFVMM 215


>gb|PNY10806.1| histone deacetylase [Trifolium pratense]
          Length = 1441

 Score =  203 bits (517), Expect = 2e-56
 Identities = 100/185 (54%), Positives = 129/185 (69%)
 Frame = -1

Query: 555 SIFQANGAWNTSSFITGPKLSIKLDDKNFLI*NQQVEGVVVNHKLHRQFVNPVIPQKFHS 376
           S+ ++ G+ ++      PKLSIKLDDKN+L+ NQQVEGV++ HKLH+  VNP IP K+ S
Sbjct: 9   SVGESTGSSSSGKVSFAPKLSIKLDDKNYLLWNQQVEGVILAHKLHKFVVNPQIPMKYAS 68

Query: 375 TADRAINKVSDAYDQWFVQDQALFTWLLPTLSDLVLPRVLNCHHAHQVWDTIHKHYLAHL 196
            +DR ++KV+DAYDQW VQDQ LFTWLL TL++ VLPR + C HA QVWD IHK++ AHL
Sbjct: 69  ESDRLLDKVTDAYDQWLVQDQMLFTWLLSTLAESVLPRTVGCRHAFQVWDQIHKYFDAHL 128

Query: 195 KAKMRQRSAELKNTKKRTXXXXXXXXXXXXXXXXXXXIGDNISDQDLVDIVLDGLPEEYN 16
           KAK+RQ  +ELK  KK T                   IGD+IS+QD +D +L+GLPEEYN
Sbjct: 129 KAKVRQLRSELKTVKKGTKSISEFVLRVRAIADTLISIGDSISEQDQIDSILEGLPEEYN 188

Query: 15  SLVML 1
             VM+
Sbjct: 189 PFVMM 193


>dbj|GAU15285.1| hypothetical protein TSUD_03520 [Trifolium subterraneum]
          Length = 392

 Score =  189 bits (481), Expect = 7e-55
 Identities = 102/202 (50%), Positives = 132/202 (65%)
 Frame = -1

Query: 606 MAPTQTPEGSHVKSQTASIFQANGAWNTSSFITGPKLSIKLDDKNFLI*NQQVEGVVVNH 427
           MA + +  G  +   T S      + N +SF   PKL  KLDD N+L+ +QQVEGV++ +
Sbjct: 1   MASSSSSSGPVMVESTGS------STNAASFT--PKL--KLDDGNYLLWSQQVEGVILAN 50

Query: 426 KLHRQFVNPVIPQKFHSTADRAINKVSDAYDQWFVQDQALFTWLLPTLSDLVLPRVLNCH 247
           KLHR  VNP IP K+ S +DR +++VS+AYD+W VQDQ LFTWLL TL++ VLPR + C 
Sbjct: 51  KLHRFVVNPQIPAKYASESDRELDRVSEAYDKWLVQDQMLFTWLLSTLAESVLPRTIGCR 110

Query: 246 HAHQVWDTIHKHYLAHLKAKMRQRSAELKNTKKRTXXXXXXXXXXXXXXXXXXXIGDNIS 67
           HA QVWD IHKH+ AHLKAK+RQ  +ELKN KK T                   IGD+IS
Sbjct: 111 HAFQVWDQIHKHFEAHLKAKVRQLRSELKNVKKGTKSITEFVLRVRVIADTLISIGDSIS 170

Query: 66  DQDLVDIVLDGLPEEYNSLVML 1
           +QD +D +L+GLPEEYN  VM+
Sbjct: 171 EQDQIDSILEGLPEEYNPFVMM 192


>gb|PNX56029.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 242

 Score =  182 bits (462), Expect = 8e-54
 Identities = 94/202 (46%), Positives = 128/202 (63%)
 Frame = -1

Query: 606 MAPTQTPEGSHVKSQTASIFQANGAWNTSSFITGPKLSIKLDDKNFLI*NQQVEGVVVNH 427
           M P QTP+ +  +    +   +    ++ S +T   L+IKLD+KN+L+ NQQV GV+  H
Sbjct: 1   MEPPQTPDANASEDVATADLPSTTKGSSKSGLTH-SLTIKLDEKNYLLWNQQVNGVITAH 59

Query: 426 KLHRQFVNPVIPQKFHSTADRAINKVSDAYDQWFVQDQALFTWLLPTLSDLVLPRVLNCH 247
            LHR  VNP IP ++ S ADR   K SD Y +W  +DQ LFTWLL T+SD VLPRVLNC 
Sbjct: 60  NLHRFVVNPEIPLQYTSVADRLDGKNSDEYQRWLFKDQTLFTWLLSTISDGVLPRVLNCK 119

Query: 246 HAHQVWDTIHKHYLAHLKAKMRQRSAELKNTKKRTXXXXXXXXXXXXXXXXXXXIGDNIS 67
           H+H+VWDTIHK + + LK++ RQ  +ELKNTKK +                   +GD +S
Sbjct: 120 HSHEVWDTIHKFFNSVLKSRARQLRSELKNTKKLSKSVNEYLLRVKSIVNSLIAVGDVVS 179

Query: 66  DQDLVDIVLDGLPEEYNSLVML 1
           +Q+ VD +L+GLPEE+NS VM+
Sbjct: 180 EQEQVDAILEGLPEEFNSFVMM 201


>gb|PNX57709.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 242

 Score =  181 bits (459), Expect = 2e-53
 Identities = 94/202 (46%), Positives = 127/202 (62%)
 Frame = -1

Query: 606 MAPTQTPEGSHVKSQTASIFQANGAWNTSSFITGPKLSIKLDDKNFLI*NQQVEGVVVNH 427
           M P QTP  +  +    +   +    ++ S +T   L+IKLD+KN+L+ NQQV GV+  H
Sbjct: 1   MEPPQTPSANASEDIATTDLPSTTKGSSKSGLTH-SLTIKLDEKNYLLWNQQVNGVITAH 59

Query: 426 KLHRQFVNPVIPQKFHSTADRAINKVSDAYDQWFVQDQALFTWLLPTLSDLVLPRVLNCH 247
            LHR  VNP IP ++ S ADR   K SD Y +W  +DQ LFTWLL T+SD VLPRVLNC 
Sbjct: 60  NLHRFVVNPEIPLQYTSVADRLDGKNSDEYQRWLFKDQTLFTWLLSTISDGVLPRVLNCK 119

Query: 246 HAHQVWDTIHKHYLAHLKAKMRQRSAELKNTKKRTXXXXXXXXXXXXXXXXXXXIGDNIS 67
           H+H+VWDTIHK + + LK++ RQ  +ELKNTKK +                   +GD +S
Sbjct: 120 HSHEVWDTIHKFFNSVLKSRARQLRSELKNTKKLSKSVNEYLLRVKSIVNSLIAVGDVVS 179

Query: 66  DQDLVDIVLDGLPEEYNSLVML 1
           +Q+ VD +L+GLPEE+NS VM+
Sbjct: 180 EQEQVDAILEGLPEEFNSFVMM 201


>gb|PNX90864.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 401

 Score =  181 bits (460), Expect = 1e-51
 Identities = 98/202 (48%), Positives = 127/202 (62%)
 Frame = -1

Query: 606 MAPTQTPEGSHVKSQTASIFQANGAWNTSSFITGPKLSIKLDDKNFLI*NQQVEGVVVNH 427
           M  T + +   +     +I   N   +T S +T   ++IKLD+KNFL+ +QQV GV+  H
Sbjct: 1   MTTTPSTDEIPIADSGIAIDLPNTKGSTKSALTH-SITIKLDEKNFLLWSQQVNGVITAH 59

Query: 426 KLHRQFVNPVIPQKFHSTADRAINKVSDAYDQWFVQDQALFTWLLPTLSDLVLPRVLNCH 247
            LHR  VNP IP +F S ADR   K SD Y +W  +DQ+LFTWLL T+SD VLPRVL+C 
Sbjct: 60  NLHRFVVNPEIPLQFASVADRLDGKTSDEYQRWLFKDQSLFTWLLSTISDNVLPRVLSCK 119

Query: 246 HAHQVWDTIHKHYLAHLKAKMRQRSAELKNTKKRTXXXXXXXXXXXXXXXXXXXIGDNIS 67
           HA++VWDTIHK++ + LKA+ RQ  +ELKNTKK T                   +GD +S
Sbjct: 120 HAYEVWDTIHKYFNSVLKARARQLRSELKNTKKLTRSVNEYLLRIKSIVNSLIAVGDVVS 179

Query: 66  DQDLVDIVLDGLPEEYNSLVML 1
            Q+ VD VL+GLPEEYNS VML
Sbjct: 180 VQEQVDAVLEGLPEEYNSFVML 201


>dbj|GAU20748.1| hypothetical protein TSUD_231620 [Trifolium subterraneum]
          Length = 327

 Score =  174 bits (440), Expect = 2e-49
 Identities = 90/202 (44%), Positives = 125/202 (61%)
 Frame = -1

Query: 606 MAPTQTPEGSHVKSQTASIFQANGAWNTSSFITGPKLSIKLDDKNFLI*NQQVEGVVVNH 427
           MA + + +   V+  T  +   N    +S       L+IKLD+KNFL  +QQV GV+  H
Sbjct: 1   MASSPSRDEIPVQHSTTEMNLPNTTKESSKSGLTHSLTIKLDEKNFLSWSQQVNGVITAH 60

Query: 426 KLHRQFVNPVIPQKFHSTADRAINKVSDAYDQWFVQDQALFTWLLPTLSDLVLPRVLNCH 247
            LHR  VNP IP +F + ADR   K SD Y +W  +DQ LFTWLL T+SD+VLPRV++C 
Sbjct: 61  NLHRFIVNPEIPLQFATVADRIDGKTSDEYRKWIFKDQTLFTWLLSTISDVVLPRVVHCK 120

Query: 246 HAHQVWDTIHKHYLAHLKAKMRQRSAELKNTKKRTXXXXXXXXXXXXXXXXXXXIGDNIS 67
           HAH+VWD IHK++ + LK+++RQ  +ELKNTKK                     +G+ I+
Sbjct: 121 HAHEVWDKIHKYFNSVLKSRIRQLKSELKNTKKLARPVSEYLLRIKSIVNSLIAMGEMIT 180

Query: 66  DQDLVDIVLDGLPEEYNSLVML 1
           +Q+ V+ +LDGLPEE+NS VM+
Sbjct: 181 EQEQVEAILDGLPEEFNSFVMM 202


>gb|PNX89801.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 403

 Score =  176 bits (445), Expect = 2e-49
 Identities = 92/197 (46%), Positives = 123/197 (62%)
 Frame = -1

Query: 591 TPEGSHVKSQTASIFQANGAWNTSSFITGPKLSIKLDDKNFLI*NQQVEGVVVNHKLHRQ 412
           T E     S TAS        +T S +T   L+IKLD+KN+L+ NQQV GV+  H LH+ 
Sbjct: 7   TTEPPIADSTTASDLPTTVKESTKSGLTHA-LTIKLDEKNYLLWNQQVNGVITAHNLHKF 65

Query: 411 FVNPVIPQKFHSTADRAINKVSDAYDQWFVQDQALFTWLLPTLSDLVLPRVLNCHHAHQV 232
            VNP IP +F S  DR   K S+ Y +W  +DQ+LFTWLL T+SD VLPRVL+C H+H+V
Sbjct: 66  VVNPDIPLQFASVTDRLDGKFSEEYQKWLFKDQSLFTWLLSTISDAVLPRVLHCKHSHEV 125

Query: 231 WDTIHKHYLAHLKAKMRQRSAELKNTKKRTXXXXXXXXXXXXXXXXXXXIGDNISDQDLV 52
           WD IHK++ + LK++ RQ  +ELKNTKK                     +GD +S+Q+ V
Sbjct: 126 WDKIHKYFNSVLKSRTRQLRSELKNTKKLARSVNEYLLRIKSIVNSLIVVGDTVSEQEQV 185

Query: 51  DIVLDGLPEEYNSLVML 1
           D +L+GLPEE+NS VM+
Sbjct: 186 DAILEGLPEEFNSFVMM 202


>gb|PNX89792.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 403

 Score =  174 bits (442), Expect = 6e-49
 Identities = 92/197 (46%), Positives = 122/197 (61%)
 Frame = -1

Query: 591 TPEGSHVKSQTASIFQANGAWNTSSFITGPKLSIKLDDKNFLI*NQQVEGVVVNHKLHRQ 412
           T E     S TAS        +T S +T   L+IKLD+KN+L+ NQQV GV+  H LH+ 
Sbjct: 7   TTEPPIADSTTASDLPTTVKESTKSGLTHA-LTIKLDEKNYLLWNQQVNGVITAHNLHKF 65

Query: 411 FVNPVIPQKFHSTADRAINKVSDAYDQWFVQDQALFTWLLPTLSDLVLPRVLNCHHAHQV 232
            VNP IP +F S  DR   K S+ Y +W  +DQ+LFTWLL T+SD VLPRVL+C H+H V
Sbjct: 66  VVNPDIPLQFASVTDRLDGKFSEEYQKWLFKDQSLFTWLLSTISDAVLPRVLHCKHSHXV 125

Query: 231 WDTIHKHYLAHLKAKMRQRSAELKNTKKRTXXXXXXXXXXXXXXXXXXXIGDNISDQDLV 52
           WD IHK++ + LK++ RQ  +ELKNTKK                     +GD +S+Q+ V
Sbjct: 126 WDKIHKYFNSVLKSRTRQLRSELKNTKKLARSVNEYLLRIKSIVNSLIAVGDTVSEQEQV 185

Query: 51  DIVLDGLPEEYNSLVML 1
           D +L+GLPEE+NS VM+
Sbjct: 186 DAILEGLPEEFNSFVMM 202


>gb|PNX82441.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 537

 Score =  177 bits (448), Expect = 1e-48
 Identities = 87/166 (52%), Positives = 113/166 (68%)
 Frame = -1

Query: 498 LSIKLDDKNFLI*NQQVEGVVVNHKLHRQFVNPVIPQKFHSTADRAINKVSDAYDQWFVQ 319
           L+IKLD+KN+L+ NQQV GV+  H LHR  VNP IP ++ S ADR   K SD Y +W  +
Sbjct: 18  LTIKLDEKNYLLWNQQVNGVITAHNLHRFVVNPEIPLQYTSVADRLDGKNSDEYQRWLFK 77

Query: 318 DQALFTWLLPTLSDLVLPRVLNCHHAHQVWDTIHKHYLAHLKAKMRQRSAELKNTKKRTX 139
           DQ LFTWLL T+SD VLPRVLNC H+H+VWDTIHK + + LK++ RQ  +ELKNTKK + 
Sbjct: 78  DQTLFTWLLSTISDGVLPRVLNCKHSHEVWDTIHKFFNSVLKSRARQLRSELKNTKKLSK 137

Query: 138 XXXXXXXXXXXXXXXXXXIGDNISDQDLVDIVLDGLPEEYNSLVML 1
                             +GD +S+Q+ VD +L+GLPEE+NS VM+
Sbjct: 138 SVNEYLLRVKSIVNSLIAVGDVVSEQEQVDAILEGLPEEFNSFVMM 183


>gb|PNX79340.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 589

 Score =  177 bits (450), Expect = 1e-48
 Identities = 87/166 (52%), Positives = 113/166 (68%)
 Frame = -1

Query: 498 LSIKLDDKNFLI*NQQVEGVVVNHKLHRQFVNPVIPQKFHSTADRAINKVSDAYDQWFVQ 319
           L+IKLDDKNFL+ +QQV GV+  H LHR  VNP IP +F + ADR   K SD Y QW  +
Sbjct: 34  LTIKLDDKNFLLWSQQVNGVITAHNLHRFVVNPQIPLQFATVADRLDGKNSDEYQQWLFK 93

Query: 318 DQALFTWLLPTLSDLVLPRVLNCHHAHQVWDTIHKHYLAHLKAKMRQRSAELKNTKKRTX 139
           DQ LFTWLL T+SD VLPRVL+C H+++VW+ IHK++ + LK++ RQ  +ELKNTKK   
Sbjct: 94  DQTLFTWLLSTISDGVLPRVLSCKHSYEVWEKIHKYFNSVLKSRARQLRSELKNTKKHAR 153

Query: 138 XXXXXXXXXXXXXXXXXXIGDNISDQDLVDIVLDGLPEEYNSLVML 1
                             +GDN+S+Q+ VD +L+GLPEEYNS VM+
Sbjct: 154 SVNEYLLRVKSIVNSLIAVGDNVSEQEQVDAILEGLPEEYNSFVMM 199


>dbj|GAU44321.1| hypothetical protein TSUD_305020 [Trifolium subterraneum]
          Length = 468

 Score =  174 bits (441), Expect = 3e-48
 Identities = 89/201 (44%), Positives = 125/201 (62%)
 Frame = -1

Query: 603 APTQTPEGSHVKSQTASIFQANGAWNTSSFITGPKLSIKLDDKNFLI*NQQVEGVVVNHK 424
           +P+   E  +  + TA+        +T S +T   L+IKLD+KNFL+ +QQ+ GV+  H 
Sbjct: 227 SPSSIHEDQNDATFTAANLPTTTKDSTKSGLTH-SLTIKLDEKNFLLWSQQINGVITTHN 285

Query: 423 LHRQFVNPVIPQKFHSTADRAINKVSDAYDQWFVQDQALFTWLLPTLSDLVLPRVLNCHH 244
           LHR  VNP IP +F S  DR   K+S+ Y +W   DQ LFTWLL T+SD +LPRVL+C H
Sbjct: 286 LHRFVVNPEIPLQFASVNDRLNGKISEEYQKWLFIDQTLFTWLLSTISDSILPRVLHCKH 345

Query: 243 AHQVWDTIHKHYLAHLKAKMRQRSAELKNTKKRTXXXXXXXXXXXXXXXXXXXIGDNISD 64
           AH+VWD IHKH+ + LK+++RQ   ELKNTKK                     +G+ +S+
Sbjct: 346 AHEVWDKIHKHFNSVLKSRIRQLRFELKNTKKLARPISEYLLRIKSIINSLIALGEAVSE 405

Query: 63  QDLVDIVLDGLPEEYNSLVML 1
           Q+ V+++LDGLPEE+N  VM+
Sbjct: 406 QEQVNVILDGLPEEFNPFVMM 426


>dbj|GAU19342.1| hypothetical protein TSUD_336290 [Trifolium subterraneum]
          Length = 1442

 Score =  179 bits (454), Expect = 7e-48
 Identities = 94/202 (46%), Positives = 126/202 (62%)
 Frame = -1

Query: 606 MAPTQTPEGSHVKSQTASIFQANGAWNTSSFITGPKLSIKLDDKNFLI*NQQVEGVVVNH 427
           M  +Q+P GS  +   A +     + +++       L+IKLD+KN+L+ NQQV GV+  H
Sbjct: 1   MEASQSPTGSASEPSGAHLNLPQTSKDSAKSGLTHSLTIKLDEKNYLLWNQQVNGVITAH 60

Query: 426 KLHRQFVNPVIPQKFHSTADRAINKVSDAYDQWFVQDQALFTWLLPTLSDLVLPRVLNCH 247
            LHR  VNP IP +F S ADR  ++ SD Y QW  +DQ LFTWLL TLSD VLPRVL C 
Sbjct: 61  DLHRFIVNPQIPIQFASDADRVADRTSDEYRQWIFKDQTLFTWLLSTLSDSVLPRVLGCK 120

Query: 246 HAHQVWDTIHKHYLAHLKAKMRQRSAELKNTKKRTXXXXXXXXXXXXXXXXXXXIGDNIS 67
           HA QVWD IHK++ + L+A+ RQ  +ELKNTKK +                   +GD +S
Sbjct: 121 HAFQVWDQIHKYFHSVLQARARQLRSELKNTKKASRSVGEYLLRIKSIVNSLLAVGDLVS 180

Query: 66  DQDLVDIVLDGLPEEYNSLVML 1
           D++ VD +L+GLPEE+NS VM+
Sbjct: 181 DREQVDAILEGLPEEFNSFVMM 202


>gb|PNX99033.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 1101

 Score =  178 bits (452), Expect = 1e-47
 Identities = 93/201 (46%), Positives = 126/201 (62%)
 Frame = -1

Query: 603 APTQTPEGSHVKSQTASIFQANGAWNTSSFITGPKLSIKLDDKNFLI*NQQVEGVVVNHK 424
           AP+      H+   TA++       +T + +T   L+IKLD+KN+L+ +QQV GV+  H 
Sbjct: 4   APSMAETAPHISDSTANL-PPTSKESTKTGLTH-SLTIKLDEKNYLLWSQQVNGVITAHN 61

Query: 423 LHRQFVNPVIPQKFHSTADRAINKVSDAYDQWFVQDQALFTWLLPTLSDLVLPRVLNCHH 244
           LHR  VNP IP +F S  DR     S AY QW V+DQ LFTWLL TLS+ VLPRVL+C H
Sbjct: 62  LHRFVVNPQIPLQFDSLEDRIQGTNSTAYQQWLVKDQTLFTWLLSTLSESVLPRVLSCRH 121

Query: 243 AHQVWDTIHKHYLAHLKAKMRQRSAELKNTKKRTXXXXXXXXXXXXXXXXXXXIGDNISD 64
           AH+VWD IHK++ + LK++ RQ  +ELKNTKK                     +GD++S+
Sbjct: 122 AHEVWDKIHKYFNSVLKSRTRQLRSELKNTKKLARSINEYLLRIKTIVNSLIAVGDSVSE 181

Query: 63  QDLVDIVLDGLPEEYNSLVML 1
           Q+ VD +L+GLPEE+NS VM+
Sbjct: 182 QEQVDAILEGLPEEFNSFVMM 202


>gb|PNX84343.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 560

 Score =  173 bits (439), Expect = 3e-47
 Identities = 85/166 (51%), Positives = 110/166 (66%)
 Frame = -1

Query: 498 LSIKLDDKNFLI*NQQVEGVVVNHKLHRQFVNPVIPQKFHSTADRAINKVSDAYDQWFVQ 319
           L+IKLD+KNFL+ +QQV GV+  H LHR  VNP IP +F S  DR     SD Y QW  +
Sbjct: 34  LTIKLDEKNFLLWSQQVNGVITAHNLHRFVVNPQIPLQFASVTDRLDGNNSDEYQQWLFK 93

Query: 318 DQALFTWLLPTLSDLVLPRVLNCHHAHQVWDTIHKHYLAHLKAKMRQRSAELKNTKKRTX 139
           DQ LFTWLL T+SD VLPRVLNC H+H+VW+TIHK++ + LK++ RQ  +ELKNTKK   
Sbjct: 94  DQTLFTWLLSTISDSVLPRVLNCKHSHEVWETIHKYFNSVLKSRARQLRSELKNTKKHGK 153

Query: 138 XXXXXXXXXXXXXXXXXXIGDNISDQDLVDIVLDGLPEEYNSLVML 1
                             +GD +S Q+ VD +L+GLPE++NS VM+
Sbjct: 154 SVNEYLLRIKSIVNSLIAVGDTVSVQEQVDAILEGLPEDFNSFVMM 199


>gb|PNX93770.1| histone deacetylase [Trifolium pratense]
          Length = 1453

 Score =  177 bits (449), Expect = 3e-47
 Identities = 95/203 (46%), Positives = 126/203 (62%), Gaps = 1/203 (0%)
 Frame = -1

Query: 606 MAPTQTPEGSHVKSQTASI-FQANGAWNTSSFITGPKLSIKLDDKNFLI*NQQVEGVVVN 430
           MA   + E   V++ TA I        +T S +T   L+IKLD+KNFL+ +QQV GV+  
Sbjct: 1   MASANSTEEPLVRNSTAEINLPQTSKESTKSGLTH-SLTIKLDEKNFLLWSQQVNGVITA 59

Query: 429 HKLHRQFVNPVIPQKFHSTADRAINKVSDAYDQWFVQDQALFTWLLPTLSDLVLPRVLNC 250
           H LHR  VNP IP ++ S  DR   K SD Y +W  +DQ LFTWLL T+SD VLPRVLNC
Sbjct: 60  HNLHRFVVNPEIPLQYASVTDRLDGKNSDEYQKWLFKDQTLFTWLLSTISDSVLPRVLNC 119

Query: 249 HHAHQVWDTIHKHYLAHLKAKMRQRSAELKNTKKRTXXXXXXXXXXXXXXXXXXXIGDNI 70
            HAH+VWD IHK++ + LK++ RQ  +ELKNTKK                     +GD +
Sbjct: 120 KHAHEVWDKIHKYFNSVLKSRARQLRSELKNTKKLARSVSEYLLRIKSIVNSLIAMGDVV 179

Query: 69  SDQDLVDIVLDGLPEEYNSLVML 1
           ++Q+ VD +L+GLPEE+NS VM+
Sbjct: 180 TEQEQVDAILEGLPEEFNSFVMM 202


>gb|PNX93258.1| histone deacetylase, partial [Trifolium pratense]
          Length = 1438

 Score =  177 bits (448), Expect = 4e-47
 Identities = 90/187 (48%), Positives = 121/187 (64%)
 Frame = -1

Query: 561 TASIFQANGAWNTSSFITGPKLSIKLDDKNFLI*NQQVEGVVVNHKLHRQFVNPVIPQKF 382
           TA +   + A N++       L+IKLD+KNFL+ +QQV GV+  H LH+  V+P IP +F
Sbjct: 15  TADLNLPSTAKNSNKSGLTHSLTIKLDEKNFLLWSQQVNGVITAHNLHKFVVHPQIPLQF 74

Query: 381 HSTADRAINKVSDAYDQWFVQDQALFTWLLPTLSDLVLPRVLNCHHAHQVWDTIHKHYLA 202
            S ADR   K SD Y QW  +DQ+LFTWLL T+SD VLPRVLNC HAH+VWD IHK++ +
Sbjct: 75  ASVADRLDGKNSDEYQQWLFKDQSLFTWLLSTISDAVLPRVLNCKHAHEVWDQIHKYFNS 134

Query: 201 HLKAKMRQRSAELKNTKKRTXXXXXXXXXXXXXXXXXXXIGDNISDQDLVDIVLDGLPEE 22
            LK++ RQ  +ELKNTKK                     +GD +S+Q+ VD +L+GLPE+
Sbjct: 135 VLKSRSRQLRSELKNTKKMARSVSEYLLRIKSIVNSLVAVGDVVSEQEQVDAILEGLPED 194

Query: 21  YNSLVML 1
           +NS VM+
Sbjct: 195 FNSFVMM 201


>dbj|GAU30708.1| hypothetical protein TSUD_39320 [Trifolium subterraneum]
          Length = 1432

 Score =  176 bits (446), Expect = 8e-47
 Identities = 91/202 (45%), Positives = 126/202 (62%)
 Frame = -1

Query: 606 MAPTQTPEGSHVKSQTASIFQANGAWNTSSFITGPKLSIKLDDKNFLI*NQQVEGVVVNH 427
           MA  Q   G    ++T ++     A ++S       L+IKLD+KNFL+ +QQV GV+  H
Sbjct: 1   MATQQQNNGDLNDTETTAMNLPTTAKDSSKSGLTHSLTIKLDEKNFLLWSQQVNGVITTH 60

Query: 426 KLHRQFVNPVIPQKFHSTADRAINKVSDAYDQWFVQDQALFTWLLPTLSDLVLPRVLNCH 247
            LHR  VNP IP +F S  DR   K+SD Y +W  +DQ LFTWLL T+SD VLPRVL+C 
Sbjct: 61  NLHRFVVNPEIPLQFASVNDRLDGKISDEYRKWLFKDQTLFTWLLSTISDSVLPRVLHCK 120

Query: 246 HAHQVWDTIHKHYLAHLKAKMRQRSAELKNTKKRTXXXXXXXXXXXXXXXXXXXIGDNIS 67
           H+H+VWD IHK++ + LK+++RQ  +ELKNTKK                     +G++IS
Sbjct: 121 HSHEVWDKIHKYFNSVLKSRIRQLRSELKNTKKLARSVSEYLLRIKSIINSLIAMGESIS 180

Query: 66  DQDLVDIVLDGLPEEYNSLVML 1
           +Q+ +D +LDGL EE+NS VM+
Sbjct: 181 EQEQIDAILDGLSEEFNSFVMM 202