BLASTX nr result
ID: Astragalus24_contig00019068
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus24_contig00019068
(578 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO23078.1| polyprotein [Glycine max] 103 6e-53
gb|PNX96484.1| Ty3/gypsy retrotransposon protein [Trifolium prat... 100 8e-52
gb|PNX92431.1| Ty3/gypsy retrotransposon protein, partial [Trifo... 104 2e-51
gb|PNX98514.1| Ty3/gypsy retrotransposon protein, partial [Trifo... 98 2e-51
dbj|GAU11620.1| hypothetical protein TSUD_346120 [Trifolium subt... 100 5e-51
dbj|GAU43714.1| hypothetical protein TSUD_179970 [Trifolium subt... 101 5e-51
dbj|GAU44596.1| hypothetical protein TSUD_187860 [Trifolium subt... 105 5e-51
dbj|GAU27453.1| hypothetical protein TSUD_161390 [Trifolium subt... 97 1e-50
gb|PNX73402.1| Ty3/gypsy retrotransposon protein, partial [Trifo... 108 2e-50
gb|PNX73110.1| Ty3/gypsy retrotransposon protein, partial [Trifo... 102 5e-50
gb|PNY17453.1| Ty3/gypsy retrotransposon protein [Trifolium prat... 103 2e-49
gb|PNX94483.1| retrotransposon-related protein, partial [Trifoli... 98 3e-49
dbj|GAU25204.1| hypothetical protein TSUD_151040 [Trifolium subt... 98 4e-49
gb|PNY16671.1| retrotransposon-related protein, partial [Trifoli... 101 7e-49
dbj|GAU10375.1| hypothetical protein TSUD_419040, partial [Trifo... 100 2e-48
dbj|GAU19157.1| hypothetical protein TSUD_79800 [Trifolium subte... 100 3e-48
dbj|GAU31857.1| hypothetical protein TSUD_114680 [Trifolium subt... 99 3e-48
dbj|GAU29525.1| hypothetical protein TSUD_115470 [Trifolium subt... 96 3e-48
dbj|GAU12540.1| hypothetical protein TSUD_182540 [Trifolium subt... 95 5e-48
gb|PNY14541.1| hypothetical protein L195_g011223 [Trifolium prat... 103 2e-47
>gb|AAO23078.1| polyprotein [Glycine max]
Length = 1552
Score = 103 bits (257), Expect(3) = 6e-53
Identities = 48/72 (66%), Positives = 54/72 (75%)
Frame = +1
Query: 1 AKFRHYLLGHQFILRTXXXXXXXXXXXXXXTPEQQAWLHKFMGYDFKIEYKPRKDNVAAD 180
+KFRHYLLG++FI+RT TPEQQAWLHKF+GYDFKIEYKP KDN AAD
Sbjct: 943 SKFRHYLLGNKFIIRTDQRSLKSLMDQSLQTPEQQAWLHKFLGYDFKIEYKPGKDNQAAD 1002
Query: 181 ELSRMFFMAWSE 216
LSRMF +AWSE
Sbjct: 1003 ALSRMFMLAWSE 1014
Score = 99.4 bits (246), Expect(3) = 6e-53
Identities = 42/60 (70%), Positives = 52/60 (86%)
Frame = +2
Query: 395 IGGHAGVARTIARITAQFYWPGLKNDVRDFVQKCVVCQQAKSINTAPAGLLQPLPIPSQV 574
IGGHAG+ RT+AR+ AQFYWP ++ DV+ ++QKC++CQQAKS NT PAGLLQPLPIP QV
Sbjct: 1083 IGGHAGITRTLARLKAQFYWPKMQEDVKAYIQKCLICQQAKSNNTLPAGLLQPLPIPQQV 1142
Score = 53.9 bits (128), Expect(3) = 6e-53
Identities = 24/59 (40%), Positives = 39/59 (66%)
Frame = +3
Query: 219 RQQISGNSDLQKIIQGCAQNVDAEQHYSVKQN*LYWKDRLVIPEKNSLIQNILNEYHSS 395
R ++ + L+++++ Q DA HY+V++ LYWKDR+VIP + ++ IL EYHSS
Sbjct: 1024 RARLISDPHLKQLMETYKQGADAS-HYTVREGLLYWKDRVVIPAEEEIVNKILQEYHSS 1081
>gb|PNX96484.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
Length = 1258
Score = 100 bits (249), Expect(3) = 8e-52
Identities = 42/60 (70%), Positives = 52/60 (86%)
Frame = +2
Query: 395 IGGHAGVARTIARITAQFYWPGLKNDVRDFVQKCVVCQQAKSINTAPAGLLQPLPIPSQV 574
IGGHAG+ART+AR+ +QFYWP +K D+ D+VQ C +CQ+AK+ NT PAGLLQPLPIPSQV
Sbjct: 788 IGGHAGMARTLARVKSQFYWPDMKTDIADYVQNCAICQKAKTTNTLPAGLLQPLPIPSQV 847
Score = 98.6 bits (244), Expect(3) = 8e-52
Identities = 45/72 (62%), Positives = 52/72 (72%)
Frame = +1
Query: 1 AKFRHYLLGHQFILRTXXXXXXXXXXXXXXTPEQQAWLHKFMGYDFKIEYKPRKDNVAAD 180
AKFRHYLLGH+FI+RT TP+QQ WLH+F+GYDF IEYKP K+NVAAD
Sbjct: 647 AKFRHYLLGHKFIIRTDQKSLRNLMEQALQTPDQQEWLHRFLGYDFSIEYKPGKENVAAD 706
Query: 181 ELSRMFFMAWSE 216
LSR+ MAWSE
Sbjct: 707 ALSRVMTMAWSE 718
Score = 53.9 bits (128), Expect(3) = 8e-52
Identities = 25/59 (42%), Positives = 36/59 (61%)
Frame = +3
Query: 219 RQQISGNSDLQKIIQGCAQNVDAEQHYSVKQN*LYWKDRLVIPEKNSLIQNILNEYHSS 395
R + +S L I+Q C QN HY+VK L+WK R+VIP+ + LI+ +L E H+S
Sbjct: 728 RAALKQDSTLLGIMQKCVQNNATNSHYTVKDELLFWKHRIVIPKNSELIKQVLYELHTS 786
>gb|PNX92431.1| Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]
Length = 1502
Score = 104 bits (260), Expect(3) = 2e-51
Identities = 46/60 (76%), Positives = 53/60 (88%)
Frame = +2
Query: 395 IGGHAGVARTIARITAQFYWPGLKNDVRDFVQKCVVCQQAKSINTAPAGLLQPLPIPSQV 574
IGGHAG+ RTIARI AQFYWP +K D+ ++V KCVVCQQAK+ NT+PAGLLQPLPIPSQV
Sbjct: 1063 IGGHAGITRTIARIKAQFYWPDMKKDIAEYVHKCVVCQQAKTTNTSPAGLLQPLPIPSQV 1122
Score = 99.8 bits (247), Expect(3) = 2e-51
Identities = 46/72 (63%), Positives = 52/72 (72%)
Frame = +1
Query: 1 AKFRHYLLGHQFILRTXXXXXXXXXXXXXXTPEQQAWLHKFMGYDFKIEYKPRKDNVAAD 180
AKFRHYLLGH+FI+RT TPEQQ WLHKF+GYDF IEYKP K+N+AAD
Sbjct: 923 AKFRHYLLGHKFIIRTDQKSLRNLMEQSLQTPEQQEWLHKFLGYDFTIEYKPGKENMAAD 982
Query: 181 ELSRMFFMAWSE 216
LSR+ MAWSE
Sbjct: 983 ALSRVMVMAWSE 994
Score = 47.4 bits (111), Expect(3) = 2e-51
Identities = 22/59 (37%), Positives = 39/59 (66%)
Frame = +3
Query: 219 RQQISGNSDLQKIIQGCAQNVDAEQHYSVKQN*LYWKDRLVIPEKNSLIQNILNEYHSS 395
R+ + ++ L++++Q A A YS+++ LYWK RLVIP+ + L+Q +L E+H+S
Sbjct: 1004 RRALENDNQLREVMQNYAIG-KAPVQYSMREGLLYWKQRLVIPKNDDLLQKLLFEFHTS 1061
>gb|PNX98514.1| Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]
Length = 1240
Score = 98.2 bits (243), Expect(3) = 2e-51
Identities = 45/72 (62%), Positives = 52/72 (72%)
Frame = +1
Query: 1 AKFRHYLLGHQFILRTXXXXXXXXXXXXXXTPEQQAWLHKFMGYDFKIEYKPRKDNVAAD 180
AKFRHYLLGH+FI+RT TPEQQ WLHKF+GYDF IEYKP K+N+AAD
Sbjct: 648 AKFRHYLLGHRFIIRTDQKSLRSLMDQSLQTPEQQEWLHKFLGYDFVIEYKPGKENLAAD 707
Query: 181 ELSRMFFMAWSE 216
LSR+ +AWSE
Sbjct: 708 ALSRLMTLAWSE 719
Score = 98.2 bits (243), Expect(3) = 2e-51
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +2
Query: 395 IGGHAGVARTIARITAQFYWPGLKNDVRDFVQKCVVCQQAKSINTAPAGLLQPLPIPSQV 574
IGGHAG+ RT+ARI +QFYW +K D+ D+VQ C+VCQQAK+ NT PAGLLQPLPIPSQV
Sbjct: 788 IGGHAGMTRTLARIKSQFYWSAMKKDIFDYVQNCLVCQQAKTTNTLPAGLLQPLPIPSQV 847
Score = 55.1 bits (131), Expect(3) = 2e-51
Identities = 27/59 (45%), Positives = 41/59 (69%)
Frame = +3
Query: 219 RQQISGNSDLQKIIQGCAQNVDAEQHYSVKQN*LYWKDRLVIPEKNSLIQNILNEYHSS 395
++ I + +L +IIQ C Q + A +Y+V++ LYWK R+VIP K +LIQ IL E+H+S
Sbjct: 729 KEAIQQDDNLLEIIQKCLQGL-APTNYTVREGILYWKHRMVIPPKAALIQQILEEFHTS 786
>dbj|GAU11620.1| hypothetical protein TSUD_346120 [Trifolium subterraneum]
Length = 1479
Score = 99.8 bits (247), Expect(3) = 5e-51
Identities = 46/72 (63%), Positives = 51/72 (70%)
Frame = +1
Query: 1 AKFRHYLLGHQFILRTXXXXXXXXXXXXXXTPEQQAWLHKFMGYDFKIEYKPRKDNVAAD 180
AKFRHYLLGH+FI+RT TP+QQ WLHKF+GYDF IEYKP KDN+AAD
Sbjct: 919 AKFRHYLLGHKFIIRTDQKSLRSLMEQSLQTPDQQEWLHKFLGYDFTIEYKPGKDNLAAD 978
Query: 181 ELSRMFFMAWSE 216
LSRM M WSE
Sbjct: 979 ALSRMMCMGWSE 990
Score = 98.2 bits (243), Expect(3) = 5e-51
Identities = 42/60 (70%), Positives = 50/60 (83%)
Frame = +2
Query: 395 IGGHAGVARTIARITAQFYWPGLKNDVRDFVQKCVVCQQAKSINTAPAGLLQPLPIPSQV 574
IGGHAG+ RT+ARI AQFYWP +K D+ +VQ C+VCQQ K+ NT PAGLLQPLPIPSQ+
Sbjct: 1059 IGGHAGMTRTLARIQAQFYWPNMKQDIVQYVQNCLVCQQTKTTNTLPAGLLQPLPIPSQI 1118
Score = 52.4 bits (124), Expect(3) = 5e-51
Identities = 24/53 (45%), Positives = 35/53 (66%)
Frame = +3
Query: 237 NSDLQKIIQGCAQNVDAEQHYSVKQN*LYWKDRLVIPEKNSLIQNILNEYHSS 395
++ L +IIQ C Q HY+V+ LYWK R+VIP ++L+Q +L E+HSS
Sbjct: 1006 DTTLMEIIQQCEQG-QTNTHYTVRDGLLYWKHRIVIPVDDALLQQVLKEFHSS 1057
>dbj|GAU43714.1| hypothetical protein TSUD_179970 [Trifolium subterraneum]
Length = 1291
Score = 101 bits (251), Expect(3) = 5e-51
Identities = 44/72 (61%), Positives = 53/72 (73%)
Frame = +1
Query: 1 AKFRHYLLGHQFILRTXXXXXXXXXXXXXXTPEQQAWLHKFMGYDFKIEYKPRKDNVAAD 180
AKFRHYLLGH+F+++T TPEQQ WLHKF+G+DFKIEYKP KDN+ AD
Sbjct: 765 AKFRHYLLGHKFVIKTDQKSLKSLLDQTLQTPEQQVWLHKFIGFDFKIEYKPGKDNIPAD 824
Query: 181 ELSRMFFMAWSE 216
LSRM+ +AWSE
Sbjct: 825 ALSRMYLLAWSE 836
Score = 95.5 bits (236), Expect(3) = 5e-51
Identities = 41/60 (68%), Positives = 51/60 (85%)
Frame = +2
Query: 395 IGGHAGVARTIARITAQFYWPGLKNDVRDFVQKCVVCQQAKSINTAPAGLLQPLPIPSQV 574
IGGHAG+ RTIARI AQF+W ++ D++++VQ CVVCQQAK N+ PAGLLQPLPIP+QV
Sbjct: 906 IGGHAGITRTIARIQAQFFWKNMRQDIKEYVQHCVVCQQAKVSNSVPAGLLQPLPIPNQV 965
Score = 53.5 bits (127), Expect(3) = 5e-51
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = +3
Query: 237 NSDLQKIIQGCAQNVDAEQHYSVKQN*LYWKDRLVIPEKNSLIQNILNEYHSS 395
+++LQ+II GC + + YSVK+ L WKD+LV+P +I+ IL E+H+S
Sbjct: 852 DAELQQIITGCQHKEEEYKLYSVKEGLLLWKDKLVVPNNTYIIKQILTEFHTS 904
>dbj|GAU44596.1| hypothetical protein TSUD_187860 [Trifolium subterraneum]
Length = 1267
Score = 105 bits (263), Expect(3) = 5e-51
Identities = 46/60 (76%), Positives = 55/60 (91%)
Frame = +2
Query: 395 IGGHAGVARTIARITAQFYWPGLKNDVRDFVQKCVVCQQAKSINTAPAGLLQPLPIPSQV 574
IGGH+G+ RTIARI +QFYWP +KND+ ++VQKCVVCQQAK+ NT+PAGLLQPLPIPSQV
Sbjct: 829 IGGHSGITRTIARIKSQFYWPDMKNDIVEYVQKCVVCQQAKTTNTSPAGLLQPLPIPSQV 888
Score = 97.8 bits (242), Expect(3) = 5e-51
Identities = 44/72 (61%), Positives = 52/72 (72%)
Frame = +1
Query: 1 AKFRHYLLGHQFILRTXXXXXXXXXXXXXXTPEQQAWLHKFMGYDFKIEYKPRKDNVAAD 180
AKFRHYLLGH+FI+RT TPEQQ WLHKF+GYDF IEYKP K+N+AAD
Sbjct: 689 AKFRHYLLGHKFIIRTDQKSLRSLMEQSLQTPEQQEWLHKFLGYDFTIEYKPGKENIAAD 748
Query: 181 ELSRMFFMAWSE 216
LSR+ ++WSE
Sbjct: 749 ALSRVMTLSWSE 760
Score = 46.6 bits (109), Expect(3) = 5e-51
Identities = 23/56 (41%), Positives = 35/56 (62%)
Frame = +3
Query: 228 ISGNSDLQKIIQGCAQNVDAEQHYSVKQN*LYWKDRLVIPEKNSLIQNILNEYHSS 395
+ +S ++ I+Q A A Q YS+K+ LYWK RLV+P N L+ +L E+H+S
Sbjct: 773 LQNDSHMKDIMQKSALGKAAIQ-YSIKEGLLYWKQRLVVPRDNDLLHKLLFEFHTS 827
>dbj|GAU27453.1| hypothetical protein TSUD_161390 [Trifolium subterraneum]
Length = 1531
Score = 97.4 bits (241), Expect(3) = 1e-50
Identities = 42/60 (70%), Positives = 51/60 (85%)
Frame = +2
Query: 395 IGGHAGVARTIARITAQFYWPGLKNDVRDFVQKCVVCQQAKSINTAPAGLLQPLPIPSQV 574
IGGHAG+ART+AR+ AQFYW +K D+ +VQ CV+CQ+AK+ NT PAGLLQPLPIPSQV
Sbjct: 1061 IGGHAGIARTLARVKAQFYWLDMKTDIAKYVQNCVICQKAKTTNTPPAGLLQPLPIPSQV 1120
Score = 97.1 bits (240), Expect(3) = 1e-50
Identities = 44/72 (61%), Positives = 52/72 (72%)
Frame = +1
Query: 1 AKFRHYLLGHQFILRTXXXXXXXXXXXXXXTPEQQAWLHKFMGYDFKIEYKPRKDNVAAD 180
AKFRHYLLGH+FI+RT TP+QQ WLH+F+GYDF IEYKP K+NVAAD
Sbjct: 920 AKFRHYLLGHKFIIRTDQKSLRNLMEQALQTPDQQEWLHRFLGYDFTIEYKPGKENVAAD 979
Query: 181 ELSRMFFMAWSE 216
LSR+ +AWSE
Sbjct: 980 ALSRVMTLAWSE 991
Score = 54.7 bits (130), Expect(3) = 1e-50
Identities = 24/59 (40%), Positives = 40/59 (67%)
Frame = +3
Query: 219 RQQISGNSDLQKIIQGCAQNVDAEQHYSVKQN*LYWKDRLVIPEKNSLIQNILNEYHSS 395
R + +S L +I++ CAQN D+ +Y++K + L+WK R+VIP+ + L Q +L E H+S
Sbjct: 1001 RVALKQDSTLLEIMEKCAQNSDSNSNYTIKDDLLFWKHRIVIPKHSELRQQVLYELHTS 1059
>gb|PNX73402.1| Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]
Length = 895
Score = 108 bits (269), Expect(3) = 2e-50
Identities = 47/60 (78%), Positives = 56/60 (93%)
Frame = +2
Query: 395 IGGHAGVARTIARITAQFYWPGLKNDVRDFVQKCVVCQQAKSINTAPAGLLQPLPIPSQV 574
IGGHAG+ RTIARIT+QFYWP +K D+ D+VQKCV+CQQAK+I+T+PAGLLQPLPIPSQV
Sbjct: 769 IGGHAGITRTIARITSQFYWPDMKTDIWDYVQKCVICQQAKTIHTSPAGLLQPLPIPSQV 828
Score = 95.9 bits (237), Expect(3) = 2e-50
Identities = 43/72 (59%), Positives = 52/72 (72%)
Frame = +1
Query: 1 AKFRHYLLGHQFILRTXXXXXXXXXXXXXXTPEQQAWLHKFMGYDFKIEYKPRKDNVAAD 180
AKFRHYLLGH+FI+RT TP+QQ WLHKF+GYDF IEYKP K+N+AAD
Sbjct: 629 AKFRHYLLGHKFIIRTDQKSLRSLMDQSLQTPDQQEWLHKFLGYDFTIEYKPGKENMAAD 688
Query: 181 ELSRMFFMAWSE 216
LSR+ ++WSE
Sbjct: 689 ALSRVMTLSWSE 700
Score = 44.3 bits (103), Expect(3) = 2e-50
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = +3
Query: 219 RQQISGNSDLQKIIQGCAQNVDAEQHYSVKQN*LYWKDRLVIPEKNSLIQNILNEYHSS 395
R + + +L +II C A Y++K LYWK RLVIP+++ L+ +L E+H+S
Sbjct: 710 RAALKKDQNLVEIILKCISG-KAPIQYTMKDGLLYWKQRLVIPKESDLLNKVLYEFHTS 767
>gb|PNX73110.1| Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]
Length = 937
Score = 102 bits (253), Expect(3) = 5e-50
Identities = 44/60 (73%), Positives = 53/60 (88%)
Frame = +2
Query: 395 IGGHAGVARTIARITAQFYWPGLKNDVRDFVQKCVVCQQAKSINTAPAGLLQPLPIPSQV 574
IGGHAG+ RT+ARI +QFYWP +K D+ ++VQ CVVCQQAK+ NT+PAGLLQPLPIPSQV
Sbjct: 520 IGGHAGITRTMARIKSQFYWPDMKKDILEYVQNCVVCQQAKTTNTSPAGLLQPLPIPSQV 579
Score = 98.6 bits (244), Expect(3) = 5e-50
Identities = 45/72 (62%), Positives = 52/72 (72%)
Frame = +1
Query: 1 AKFRHYLLGHQFILRTXXXXXXXXXXXXXXTPEQQAWLHKFMGYDFKIEYKPRKDNVAAD 180
AKFRHYLLGH+FI+RT TPEQQ WLHKF+GYDF IEYKP K+N+AAD
Sbjct: 380 AKFRHYLLGHKFIIRTDQKSLRSLMEQSLQTPEQQEWLHKFLGYDFTIEYKPGKENMAAD 439
Query: 181 ELSRMFFMAWSE 216
LSR+ +AWSE
Sbjct: 440 ALSRLMTLAWSE 451
Score = 46.2 bits (108), Expect(3) = 5e-50
Identities = 20/56 (35%), Positives = 36/56 (64%)
Frame = +3
Query: 228 ISGNSDLQKIIQGCAQNVDAEQHYSVKQN*LYWKDRLVIPEKNSLIQNILNEYHSS 395
+ ++ + +I+ CA A Y++++ LYWK RLVIP++N L+ +L E+H+S
Sbjct: 464 LQNDNQMMEIMLKCASG-KAPIQYTMREGLLYWKQRLVIPKQNELLHKVLYEFHTS 518
>gb|PNY17453.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
Length = 1535
Score = 103 bits (258), Expect(3) = 2e-49
Identities = 45/60 (75%), Positives = 54/60 (90%)
Frame = +2
Query: 395 IGGHAGVARTIARITAQFYWPGLKNDVRDFVQKCVVCQQAKSINTAPAGLLQPLPIPSQV 574
IGGHAG+ RT+ARI +QFYWP +K D+ D+VQKC+VCQQAK+ NT+PAGLLQPLPIPSQV
Sbjct: 1060 IGGHAGITRTMARIKSQFYWPDMKQDIIDYVQKCMVCQQAKTTNTSPAGLLQPLPIPSQV 1119
Score = 95.9 bits (237), Expect(3) = 2e-49
Identities = 43/72 (59%), Positives = 52/72 (72%)
Frame = +1
Query: 1 AKFRHYLLGHQFILRTXXXXXXXXXXXXXXTPEQQAWLHKFMGYDFKIEYKPRKDNVAAD 180
AKFRHYLLGH+FI+RT TP+QQ WLHKF+GYDF IEYKP K+N+AAD
Sbjct: 920 AKFRHYLLGHKFIIRTDQKSLRSLMEQSLQTPDQQEWLHKFLGYDFTIEYKPGKENMAAD 979
Query: 181 ELSRMFFMAWSE 216
LSR+ ++WSE
Sbjct: 980 ALSRIMTLSWSE 991
Score = 45.1 bits (105), Expect(3) = 2e-49
Identities = 21/59 (35%), Positives = 35/59 (59%)
Frame = +3
Query: 219 RQQISGNSDLQKIIQGCAQNVDAEQHYSVKQN*LYWKDRLVIPEKNSLIQNILNEYHSS 395
R + ++ +++I+ C A YS++ LYWK RLVIP+ N L+ +L E+H+S
Sbjct: 1001 RVALQNDNQMREILMKCNAG-KAPVQYSMRDGLLYWKQRLVIPKDNDLLYKVLFEFHTS 1058
>gb|PNX94483.1| retrotransposon-related protein, partial [Trifolium pratense]
Length = 1287
Score = 97.8 bits (242), Expect(3) = 3e-49
Identities = 45/72 (62%), Positives = 52/72 (72%)
Frame = +1
Query: 1 AKFRHYLLGHQFILRTXXXXXXXXXXXXXXTPEQQAWLHKFMGYDFKIEYKPRKDNVAAD 180
AKFRHYLLGH+FI+RT TPEQQ WLHKF+GYDF IEYKP K+N+AAD
Sbjct: 921 AKFRHYLLGHRFIIRTDQKSLRSLMDQSLQTPEQQQWLHKFLGYDFVIEYKPGKENLAAD 980
Query: 181 ELSRMFFMAWSE 216
LSR+ +AWSE
Sbjct: 981 ALSRVMTLAWSE 992
Score = 95.5 bits (236), Expect(3) = 3e-49
Identities = 41/60 (68%), Positives = 50/60 (83%)
Frame = +2
Query: 395 IGGHAGVARTIARITAQFYWPGLKNDVRDFVQKCVVCQQAKSINTAPAGLLQPLPIPSQV 574
IGGHAG RT+ARI +QFYW +K DV +++Q CV+CQQAK+ NT PAGLLQPLPIP+QV
Sbjct: 1062 IGGHAGFTRTLARIKSQFYWVAMKKDVLEYIQNCVICQQAKTTNTLPAGLLQPLPIPTQV 1121
Score = 51.2 bits (121), Expect(3) = 3e-49
Identities = 21/47 (44%), Positives = 35/47 (74%)
Frame = +3
Query: 255 IIQGCAQNVDAEQHYSVKQN*LYWKDRLVIPEKNSLIQNILNEYHSS 395
II+ C ++ Y+++ LYWK+R+VIP+K++LIQ +L+E+HSS
Sbjct: 1014 IIEKCISQGNSYLQYTLRDGVLYWKNRVVIPQKSALIQQVLHEFHSS 1060
>dbj|GAU25204.1| hypothetical protein TSUD_151040 [Trifolium subterraneum]
Length = 1512
Score = 98.2 bits (243), Expect(3) = 4e-49
Identities = 46/77 (59%), Positives = 53/77 (68%)
Frame = +1
Query: 1 AKFRHYLLGHQFILRTXXXXXXXXXXXXXXTPEQQAWLHKFMGYDFKIEYKPRKDNVAAD 180
AKFRHYLLGH+FI+RT TP+QQ WLH+F+GYDF IEYKP KDNV AD
Sbjct: 919 AKFRHYLLGHKFIIRTDQKSLRNLMEQTLQTPDQQEWLHRFLGYDFSIEYKPGKDNVVAD 978
Query: 181 ELSRMFFMAWSERGNRL 231
LSR+ +AWSE RL
Sbjct: 979 ALSRVMTLAWSEPQFRL 995
Score = 94.4 bits (233), Expect(3) = 4e-49
Identities = 39/60 (65%), Positives = 50/60 (83%)
Frame = +2
Query: 395 IGGHAGVARTIARITAQFYWPGLKNDVRDFVQKCVVCQQAKSINTAPAGLLQPLPIPSQV 574
+GGHAG+ RT+AR+ AQFYW +K D+ ++VQ C +CQ+AK+ NT PAGLLQPLPIPSQV
Sbjct: 1060 LGGHAGITRTVARVKAQFYWSDMKKDIVEYVQNCEICQKAKTANTLPAGLLQPLPIPSQV 1119
Score = 51.2 bits (121), Expect(3) = 4e-49
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +3
Query: 246 LQKIIQGCAQNVDAEQHYSVKQN*LYWKDRLVIPEKNSLIQNILNEYHSS 395
L KI CAQ+ HY++K + L+WK R+VIP +LIQ +L E H+S
Sbjct: 1009 LVKIRMECAQHSQPGSHYTIKDDLLFWKQRIVIPHDGALIQQVLYELHTS 1058
>gb|PNY16671.1| retrotransposon-related protein, partial [Trifolium pratense]
Length = 1284
Score = 101 bits (251), Expect(3) = 7e-49
Identities = 44/60 (73%), Positives = 53/60 (88%)
Frame = +2
Query: 395 IGGHAGVARTIARITAQFYWPGLKNDVRDFVQKCVVCQQAKSINTAPAGLLQPLPIPSQV 574
IGGHAG+ RTIARI +QFYW +K D+ ++VQKCVVCQQAK+ NT+PAGLLQPLPIP+QV
Sbjct: 1048 IGGHAGITRTIARIKSQFYWQDMKQDITEYVQKCVVCQQAKTTNTSPAGLLQPLPIPAQV 1107
Score = 95.9 bits (237), Expect(3) = 7e-49
Identities = 42/72 (58%), Positives = 52/72 (72%)
Frame = +1
Query: 1 AKFRHYLLGHQFILRTXXXXXXXXXXXXXXTPEQQAWLHKFMGYDFKIEYKPRKDNVAAD 180
AKFRHYL+GH+FI+RT TPEQQ WLH+F+GYDF IEYKP K+N+AAD
Sbjct: 908 AKFRHYLMGHKFIIRTDQKSLRSLMEQSLQTPEQQEWLHRFLGYDFTIEYKPGKENIAAD 967
Query: 181 ELSRMFFMAWSE 216
LSR+ ++WSE
Sbjct: 968 ALSRVMTLSWSE 979
Score = 45.8 bits (107), Expect(3) = 7e-49
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = +3
Query: 198 FHGLV*ARQQISGNSDLQKIIQGCAQNVDAEQHYSVKQN*LYWKDRLVIPEKNSLIQNIL 377
+H + + + + D+ II+ C A YS++ LYWK RL+IP+ + L+ IL
Sbjct: 982 YHFIEQLKVALQSDHDMSNIIRKCKSG-KAPIQYSIRDGLLYWKQRLMIPKDSDLLNKIL 1040
Query: 378 NEYHSS 395
E+H+S
Sbjct: 1041 FEFHTS 1046
>dbj|GAU10375.1| hypothetical protein TSUD_419040, partial [Trifolium subterraneum]
Length = 708
Score = 100 bits (250), Expect(3) = 2e-48
Identities = 47/72 (65%), Positives = 53/72 (73%)
Frame = +1
Query: 1 AKFRHYLLGHQFILRTXXXXXXXXXXXXXXTPEQQAWLHKFMGYDFKIEYKPRKDNVAAD 180
AKFRHYLLGH+FI+RT TPEQQAWLHKF+GYDF IEYKP KDN+AAD
Sbjct: 154 AKFRHYLLGHKFIIRTDQKSLKSLMDQSLQTPEQQAWLHKFIGYDFTIEYKPGKDNMAAD 213
Query: 181 ELSRMFFMAWSE 216
LSR+ MAWS+
Sbjct: 214 ALSRVCLMAWSK 225
Score = 97.4 bits (241), Expect(3) = 2e-48
Identities = 40/60 (66%), Positives = 52/60 (86%)
Frame = +2
Query: 395 IGGHAGVARTIARITAQFYWPGLKNDVRDFVQKCVVCQQAKSINTAPAGLLQPLPIPSQV 574
+GGHAG+ART+AR++AQF+W +KND+++FVQ C++CQQAK APAGLLQPLPIP QV
Sbjct: 293 VGGHAGIARTMARVSAQFFWKNMKNDIKEFVQSCLICQQAKHDTRAPAGLLQPLPIPEQV 352
Score = 43.1 bits (100), Expect(3) = 2e-48
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = +3
Query: 219 RQQISGNSDLQKIIQGCAQNVDAEQHYSVKQN*LYWKDRLVIPEKNSLIQNILNEYHSSL 398
R+ I +S +Q ++ G + N EQ + KQ +YW+DR+V+P+ L +L E+HSS
Sbjct: 235 RRSIEKDSQIQNLV-GTSDN-GQEQKFIQKQGLIYWQDRIVVPDDPQLKAKLLLEFHSSP 292
Query: 399 V 401
V
Sbjct: 293 V 293
>dbj|GAU19157.1| hypothetical protein TSUD_79800 [Trifolium subterraneum]
Length = 1500
Score = 100 bits (248), Expect(3) = 3e-48
Identities = 42/60 (70%), Positives = 53/60 (88%)
Frame = +2
Query: 395 IGGHAGVARTIARITAQFYWPGLKNDVRDFVQKCVVCQQAKSINTAPAGLLQPLPIPSQV 574
IGGH+ + RT+ARI +QFYWP +K D+ ++VQKC+VCQQAK+ NT+PAGLLQPLPIPSQV
Sbjct: 1025 IGGHSSITRTLARIKSQFYWPDMKKDIIEYVQKCIVCQQAKTTNTSPAGLLQPLPIPSQV 1084
Score = 98.6 bits (244), Expect(3) = 3e-48
Identities = 45/72 (62%), Positives = 52/72 (72%)
Frame = +1
Query: 1 AKFRHYLLGHQFILRTXXXXXXXXXXXXXXTPEQQAWLHKFMGYDFKIEYKPRKDNVAAD 180
AKFRHYLLGH+FI+RT TPEQQ WLHKF+GYDF IEYKP KDN+AAD
Sbjct: 885 AKFRHYLLGHKFIIRTDQKSLRSLMEQSLQTPEQQEWLHKFLGYDFTIEYKPGKDNMAAD 944
Query: 181 ELSRMFFMAWSE 216
LSR+ ++WSE
Sbjct: 945 ALSRIMTLSWSE 956
Score = 42.4 bits (98), Expect(3) = 3e-48
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3
Query: 285 AEQHYSVKQN*LYWKDRLVIPEKNSLIQNILNEYHSS 395
A YS K+ LYWK RLVIP ++L+ +L E+H+S
Sbjct: 987 APVQYSTKEGLLYWKQRLVIPRDSNLLHKVLFEFHTS 1023
>dbj|GAU31857.1| hypothetical protein TSUD_114680 [Trifolium subterraneum]
Length = 818
Score = 99.0 bits (245), Expect(3) = 3e-48
Identities = 48/77 (62%), Positives = 53/77 (68%)
Frame = +1
Query: 1 AKFRHYLLGHQFILRTXXXXXXXXXXXXXXTPEQQAWLHKFMGYDFKIEYKPRKDNVAAD 180
AKFRHY+LGH+FI+RT TPEQQ WLHKF+G+DF IEYKP KDNVAAD
Sbjct: 352 AKFRHYILGHKFIIRTDQQSLKALTDQTIQTPEQQKWLHKFLGFDFTIEYKPGKDNVAAD 411
Query: 181 ELSRMFFMAWSERGNRL 231
LSR FFMA S N L
Sbjct: 412 ALSRSFFMATSSPVNSL 428
Score = 90.1 bits (222), Expect(3) = 3e-48
Identities = 42/63 (66%), Positives = 48/63 (76%)
Frame = +2
Query: 386 SQFIGGHAGVARTIARITAQFYWPGLKNDVRDFVQKCVVCQQAKSINTAPAGLLQPLPIP 565
S +G HAG+ART ARI +QF WP L DVR FV +C+VCQQAKS N APAGLLQPL IP
Sbjct: 490 SSLLGAHAGIARTKARIASQFTWPSLSRDVRLFVSQCLVCQQAKSSNVAPAGLLQPLSIP 549
Query: 566 SQV 574
Q+
Sbjct: 550 LQI 552
Score = 52.0 bits (123), Expect(3) = 3e-48
Identities = 23/58 (39%), Positives = 39/58 (67%)
Frame = +3
Query: 228 ISGNSDLQKIIQGCAQNVDAEQHYSVKQN*LYWKDRLVIPEKNSLIQNILNEYHSSLV 401
++ + L ++ C Q AE Y V+Q+ LYWK+++V+P+ +IQ+IL E+HSSL+
Sbjct: 436 VNYDPSLAQVKLQCLQGTCAESLYQVRQDILYWKNKIVVPQIPHIIQSILQEFHSSLL 493
>dbj|GAU29525.1| hypothetical protein TSUD_115470 [Trifolium subterraneum]
Length = 1556
Score = 96.3 bits (238), Expect(3) = 3e-48
Identities = 44/72 (61%), Positives = 52/72 (72%)
Frame = +1
Query: 1 AKFRHYLLGHQFILRTXXXXXXXXXXXXXXTPEQQAWLHKFMGYDFKIEYKPRKDNVAAD 180
AKFRHYLLGH+FI+RT TPEQQAWLHKF+G+DF IEYKP K+N+A D
Sbjct: 936 AKFRHYLLGHKFIIRTDQKSLKALLEQTLQTPEQQAWLHKFIGFDFTIEYKPGKENLAVD 995
Query: 181 ELSRMFFMAWSE 216
LSR+ +AWSE
Sbjct: 996 ALSRINLLAWSE 1007
Score = 81.6 bits (200), Expect(3) = 3e-48
Identities = 34/60 (56%), Positives = 46/60 (76%)
Frame = +2
Query: 395 IGGHAGVARTIARITAQFYWPGLKNDVRDFVQKCVVCQQAKSINTAPAGLLQPLPIPSQV 574
IGGH+G+ RT+ARI +QFYW ++ + F++ CV+CQQAK+ T PAGLL PLPIP+ V
Sbjct: 1077 IGGHSGITRTMARIASQFYWTHMRQHIVAFIKHCVICQQAKTTTTTPAGLLAPLPIPTLV 1136
Score = 62.8 bits (151), Expect(3) = 3e-48
Identities = 30/59 (50%), Positives = 43/59 (72%)
Frame = +3
Query: 219 RQQISGNSDLQKIIQGCAQNVDAEQHYSVKQN*LYWKDRLVIPEKNSLIQNILNEYHSS 395
R +I ++ L++IIQ C N A+ +Y+VK N L+W+ RLVIPE ++LIQ IL E+HSS
Sbjct: 1017 RLEIQQDTHLKEIIQQCLNNSCADANYTVKDNLLFWQQRLVIPENSTLIQKILLEFHSS 1075
>dbj|GAU12540.1| hypothetical protein TSUD_182540 [Trifolium subterraneum]
Length = 1451
Score = 95.1 bits (235), Expect(3) = 5e-48
Identities = 43/72 (59%), Positives = 51/72 (70%)
Frame = +1
Query: 1 AKFRHYLLGHQFILRTXXXXXXXXXXXXXXTPEQQAWLHKFMGYDFKIEYKPRKDNVAAD 180
AKFRHY LGH+FI+RT TP+QQ WLHKF+GYDF IEYKP K+N+AAD
Sbjct: 864 AKFRHYFLGHRFIIRTDQKSLRSLMDQSLQTPDQQQWLHKFLGYDFVIEYKPGKENLAAD 923
Query: 181 ELSRMFFMAWSE 216
LSR+ +AWSE
Sbjct: 924 ALSRVMTLAWSE 935
Score = 94.0 bits (232), Expect(3) = 5e-48
Identities = 41/60 (68%), Positives = 48/60 (80%)
Frame = +2
Query: 395 IGGHAGVARTIARITAQFYWPGLKNDVRDFVQKCVVCQQAKSINTAPAGLLQPLPIPSQV 574
IGGHAG RT+ARI +QFYW +K DV +++Q C +CQQAK NT PAGLLQPLPIPSQV
Sbjct: 1005 IGGHAGFTRTLARIKSQFYWIAMKKDVLEYIQNCAICQQAKHTNTLPAGLLQPLPIPSQV 1064
Score = 51.2 bits (121), Expect(3) = 5e-48
Identities = 21/59 (35%), Positives = 40/59 (67%)
Frame = +3
Query: 219 RQQISGNSDLQKIIQGCAQNVDAEQHYSVKQN*LYWKDRLVIPEKNSLIQNILNEYHSS 395
+ +I ++ I+ C ++ Y++++ LYWK+R+VIP+K++LIQ +L+E+HSS
Sbjct: 945 KDEIKADTYWSDIMDKCKSQGNSYLQYTLREGVLYWKNRVVIPKKSALIQQVLHEFHSS 1003
>gb|PNY14541.1| hypothetical protein L195_g011223 [Trifolium pratense]
Length = 763
Score = 103 bits (257), Expect(3) = 2e-47
Identities = 43/60 (71%), Positives = 55/60 (91%)
Frame = +2
Query: 395 IGGHAGVARTIARITAQFYWPGLKNDVRDFVQKCVVCQQAKSINTAPAGLLQPLPIPSQV 574
IGGHAG+ RT++RIT+QFYWP + D+ D+VQKCV+CQQAK+++T+PAGLLQPLPIPSQV
Sbjct: 285 IGGHAGITRTMSRITSQFYWPDMNKDIWDYVQKCVICQQAKTVHTSPAGLLQPLPIPSQV 344
Score = 94.0 bits (232), Expect(3) = 2e-47
Identities = 42/72 (58%), Positives = 51/72 (70%)
Frame = +1
Query: 1 AKFRHYLLGHQFILRTXXXXXXXXXXXXXXTPEQQAWLHKFMGYDFKIEYKPRKDNVAAD 180
AKFRHYLLGH+F++ T TPEQQ WLHKF+GYDF IEYKP K+N+AAD
Sbjct: 145 AKFRHYLLGHRFVICTDQKSLRSLMDQSLQTPEQQEWLHKFLGYDFTIEYKPGKENMAAD 204
Query: 181 ELSRMFFMAWSE 216
LSR+ ++WSE
Sbjct: 205 ALSRLMTLSWSE 216
Score = 40.8 bits (94), Expect(3) = 2e-47
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +3
Query: 297 YSVKQN*LYWKDRLVIPEKNSLIQNILNEYHSS 395
Y+++ LYWK RLVIP+ N L+ IL ++H+S
Sbjct: 251 YTMRDGLLYWKQRLVIPKNNDLLHKILYKFHTS 283