BLASTX nr result

ID: Astragalus24_contig00018981 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00018981
         (523 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004516413.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    87   8e-17
gb|PNX54512.1| DEAD-box ATP-dependent RNA helicase family protei...    70   2e-12
gb|PNY11375.1| DEAD-box ATP-dependent RNA helicase 31-like prote...    70   9e-11
gb|PNX59285.1| DEAD-box ATP-dependent RNA helicase family protei...    63   6e-10
ref|XP_013444648.1| DEAD-box ATP-dependent RNA helicase family p...    60   2e-07
dbj|GAU42361.1| hypothetical protein TSUD_350270, partial [Trifo...    59   4e-07

>ref|XP_004516413.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Cicer
           arietinum]
          Length = 687

 Score = 87.4 bits (215), Expect = 8e-17
 Identities = 59/145 (40%), Positives = 68/145 (46%)
 Frame = -3

Query: 482 MPTNXXXXXXXXXXLQPMKLQSSPFFSRTLFKFTQXXXXXXXXXXXPLSSRPNRMDRVRA 303
           MPT            QPMKL SSPF SRT FKF+            P SSRP   DR+R+
Sbjct: 1   MPTKLFLSQLRLLQFQPMKLHSSPFLSRTFFKFSHLSLRNAPFRLRPFSSRP---DRIRS 57

Query: 302 SKSLVDDEADLSNWVDDLRTGXXXXXXXXXXAQRVDXXXXXXXXXXXXXXXXSTXXXXXX 123
           SKSL+DDEADLSNWVD LRT              VD                 +      
Sbjct: 58  SKSLIDDEADLSNWVDALRTDNFASQRMDSRPAPVD---DGRSGPRKSGVGRGSSLGKRR 114

Query: 122 XXXXXXXKPNVNVKRKFQLSSDDDE 48
                  KPN+N KR+FQLSSD+D+
Sbjct: 115 GDDFSKGKPNLNSKRRFQLSSDNDD 139


>gb|PNX54512.1| DEAD-box ATP-dependent RNA helicase family protein, partial
           [Trifolium pratense]
          Length = 117

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 41/81 (50%), Positives = 46/81 (56%)
 Frame = -3

Query: 482 MPTNXXXXXXXXXXLQPMKLQSSPFFSRTLFKFTQXXXXXXXXXXXPLSSRPNRMDRVRA 303
           MPT            QPMKL S  F S+TLFKF+              S +P   DR+R 
Sbjct: 1   MPTKIFLSQLRLLHFQPMKLHSPQFLSQTLFKFSHLPLQNAAFRP--FSVKP---DRIRV 55

Query: 302 SKSLVDDEADLSNWVDDLRTG 240
           SKSLVDDEA+LSNWVDDLRTG
Sbjct: 56  SKSLVDDEAELSNWVDDLRTG 76


>gb|PNY11375.1| DEAD-box ATP-dependent RNA helicase 31-like protein [Trifolium
           pratense]
          Length = 744

 Score = 70.1 bits (170), Expect = 9e-11
 Identities = 41/81 (50%), Positives = 46/81 (56%)
 Frame = -3

Query: 482 MPTNXXXXXXXXXXLQPMKLQSSPFFSRTLFKFTQXXXXXXXXXXXPLSSRPNRMDRVRA 303
           MPT            QPMKL S  F S+TLFKF+              S +P   DR+R 
Sbjct: 1   MPTKIFLSQLRLLHFQPMKLHSPQFLSQTLFKFSHLPLQNAAFRP--FSVKP---DRIRV 55

Query: 302 SKSLVDDEADLSNWVDDLRTG 240
           SKSLVDDEA+LSNWVDDLRTG
Sbjct: 56  SKSLVDDEAELSNWVDDLRTG 76


>gb|PNX59285.1| DEAD-box ATP-dependent RNA helicase family protein, partial
           [Trifolium pratense]
          Length = 94

 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 36/64 (56%), Positives = 41/64 (64%)
 Frame = -3

Query: 431 MKLQSSPFFSRTLFKFTQXXXXXXXXXXXPLSSRPNRMDRVRASKSLVDDEADLSNWVDD 252
           MKL S  F S+TLFKF+              S +P   DR+R SKSLVDDEA+LSNWVDD
Sbjct: 1   MKLHSPQFLSQTLFKFSHLPLQNAAFRP--FSVKP---DRIRVSKSLVDDEAELSNWVDD 55

Query: 251 LRTG 240
           LRTG
Sbjct: 56  LRTG 59


>ref|XP_013444648.1| DEAD-box ATP-dependent RNA helicase family protein [Medicago
           truncatula]
 gb|KEH18673.1| DEAD-box ATP-dependent RNA helicase family protein [Medicago
           truncatula]
          Length = 668

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/65 (56%), Positives = 40/65 (61%)
 Frame = -3

Query: 434 PMKLQSSPFFSRTLFKFTQXXXXXXXXXXXPLSSRPNRMDRVRASKSLVDDEADLSNWVD 255
           PMKL S      +LFK +            P S RP   DR+RASKSLVDDEADLSNWVD
Sbjct: 16  PMKLHSL-----SLFKLSHIPLRNAAFHPRPFSVRP---DRIRASKSLVDDEADLSNWVD 67

Query: 254 DLRTG 240
           DLRTG
Sbjct: 68  DLRTG 72


>dbj|GAU42361.1| hypothetical protein TSUD_350270, partial [Trifolium subterraneum]
          Length = 589

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 36/64 (56%), Positives = 40/64 (62%)
 Frame = -3

Query: 431 MKLQSSPFFSRTLFKFTQXXXXXXXXXXXPLSSRPNRMDRVRASKSLVDDEADLSNWVDD 252
           MKL S P     LFKF+            P S +P   DR+RASKSLVDDEA+LSNWVDD
Sbjct: 1   MKLHSLP-----LFKFSHIPLRNAAFHPRPFSVKP---DRIRASKSLVDDEAELSNWVDD 52

Query: 251 LRTG 240
           LRTG
Sbjct: 53  LRTG 56


Top