BLASTX nr result
ID: Astragalus24_contig00018571
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus24_contig00018571
(598 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PNX81877.1| hypothetical protein L195_g037902, partial [Trifo... 157 8e-65
gb|PNX93789.1| copia-type polyprotein [Trifolium pratense] 150 4e-62
gb|KZV40714.1| retrovirus-related Pol polyprotein from transposo... 163 4e-62
gb|KZV22085.1| retrovirus-related Pol polyprotein from transposo... 162 4e-62
gb|PRQ33949.1| putative RNA-directed DNA polymerase [Rosa chinen... 164 4e-62
emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera] 156 1e-61
gb|PRQ33299.1| putative RNA-directed DNA polymerase [Rosa chinen... 162 2e-61
gb|KYP44586.1| Retrovirus-related Pol polyprotein from transposo... 158 2e-61
gb|PNX71231.1| copia-type polyprotein, partial [Trifolium pratense] 158 5e-61
ref|XP_017192857.1| PREDICTED: uncharacterized mitochondrial pro... 164 7e-61
gb|PNY07765.1| putative copia-type polyprotein [Trifolium pratense] 167 8e-61
gb|PNX85069.1| retrotransposon-related protein [Trifolium pratense] 151 1e-60
gb|KYP44456.1| Retrovirus-related Pol polyprotein from transposo... 157 1e-60
dbj|GAU50131.1| hypothetical protein TSUD_192520 [Trifolium subt... 166 2e-60
ref|XP_024190472.1| uncharacterized protein LOC112194469 [Rosa c... 152 2e-60
gb|PRQ52345.1| putative RNA-directed DNA polymerase [Rosa chinen... 159 2e-60
gb|PNY15642.1| copia-type polyprotein [Trifolium pratense] 168 3e-60
dbj|GAU29997.1| hypothetical protein TSUD_160820 [Trifolium subt... 162 4e-60
gb|PRQ42077.1| putative RNA-directed DNA polymerase [Rosa chinen... 159 4e-60
gb|PNX96091.1| retrotransposon-related protein [Trifolium pratense] 154 5e-60
>gb|PNX81877.1| hypothetical protein L195_g037902, partial [Trifolium pratense]
Length = 575
Score = 157 bits (397), Expect(2) = 8e-65
Identities = 75/124 (60%), Positives = 96/124 (77%)
Frame = +2
Query: 2 LYVDDLVYTGNDVNLLEEFKDLMKKEFSMTDLGKMKYFLGVEVTQLEEGICISQRKYAAD 181
LYVDDL++TGND N+ +EFK M+KEF+M+DLGKM YFLGVEV Q EEGI I QRKY D
Sbjct: 269 LYVDDLIFTGNDENMFKEFKKSMEKEFNMSDLGKMHYFLGVEVIQNEEGIYICQRKYVTD 328
Query: 182 ILKRFDMVNCNSVKVPMVSGCKLGRDIEGEKVDSTLYKQLLGSLMYMTATRPDIMHAVCL 361
+L+RF M N + P+ GCKL +D G KVD+T+YKQ++G LMY+ ATRPD+M+ + L
Sbjct: 329 LLERFGMEKSNLSRNPIAPGCKLIKDENGVKVDATMYKQVVGCLMYLAATRPDLMYVLSL 388
Query: 362 ISRY 373
ISR+
Sbjct: 389 ISRF 392
Score = 118 bits (295), Expect(2) = 8e-65
Identities = 55/83 (66%), Positives = 67/83 (80%)
Frame = +3
Query: 348 MLYVLSADMNCPTQAHWLASKRSLRYLQGTLDLGIMYKKGGNSALIGYTDSDYAGDLEDR 527
+L ++S MNCPT+ H A KR LRYL GT++LGIMYK+GGN L YTDSDYAGDL+DR
Sbjct: 385 VLSLISRFMNCPTELHMHAVKRVLRYLNGTINLGIMYKRGGNEKLEAYTDSDYAGDLDDR 444
Query: 528 KSTSRYAFLMSIGAVAWASKKQP 596
KSTS Y F++S GAV+W+SKKQP
Sbjct: 445 KSTSGYVFMLSAGAVSWSSKKQP 467
>gb|PNX93789.1| copia-type polyprotein [Trifolium pratense]
Length = 1347
Score = 150 bits (379), Expect(2) = 4e-62
Identities = 73/124 (58%), Positives = 96/124 (77%)
Frame = +2
Query: 2 LYVDDLVYTGNDVNLLEEFKDLMKKEFSMTDLGKMKYFLGVEVTQLEEGICISQRKYAAD 181
LYVDDL+YTGND + EEFK+ M EF M+DLG+M+YFLG+EV Q GI + QR+YA +
Sbjct: 1029 LYVDDLIYTGNDRIMCEEFKNSMMVEFDMSDLGRMRYFLGIEVIQNPNGIFVCQRRYAHE 1088
Query: 182 ILKRFDMVNCNSVKVPMVSGCKLGRDIEGEKVDSTLYKQLLGSLMYMTATRPDIMHAVCL 361
+L RF M N NSV+ P+V G KL ++ E KVD+TLY +++GSLMY+TATRPD+M+ V L
Sbjct: 1089 VLVRFGMNNSNSVQNPIVPGTKLSKNNEETKVDATLYMKMVGSLMYLTATRPDLMYGVSL 1148
Query: 362 ISRY 373
ISR+
Sbjct: 1149 ISRF 1152
Score = 116 bits (290), Expect(2) = 4e-62
Identities = 51/80 (63%), Positives = 67/80 (83%)
Frame = +3
Query: 357 VLSADMNCPTQAHWLASKRSLRYLQGTLDLGIMYKKGGNSALIGYTDSDYAGDLEDRKST 536
++S M+CPT++HWLA+KR LRYL+GT +LGI YKKG NS L+ YTDSD+AGDL+DR+ST
Sbjct: 1148 LISRFMSCPTESHWLAAKRILRYLKGTTELGIFYKKGDNSNLVAYTDSDFAGDLDDRRST 1207
Query: 537 SRYAFLMSIGAVAWASKKQP 596
S + FL+ AV+W+SKKQP
Sbjct: 1208 SGFVFLLGSAAVSWSSKKQP 1227
>gb|KZV40714.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dorcoceras hygrometricum]
Length = 536
Score = 163 bits (412), Expect(2) = 4e-62
Identities = 80/128 (62%), Positives = 103/128 (80%), Gaps = 1/128 (0%)
Frame = +2
Query: 2 LYVDDLVYTGNDVNLLEEFKDLMKKEFSMTDLGKMKYFLGVEVTQL-EEGICISQRKYAA 178
+YVDDL++TGN+V LLEEFK MK+EF MTDLGKM+YFLG+EV Q E+G+ I QRKYAA
Sbjct: 212 VYVDDLLFTGNNVRLLEEFKCSMKREFDMTDLGKMRYFLGIEVVQNPEKGVFICQRKYAA 271
Query: 179 DILKRFDMVNCNSVKVPMVSGCKLGRDIEGEKVDSTLYKQLLGSLMYMTATRPDIMHAVC 358
+++ RF M + N V P+ G K+GRD GEK+DSTLYKQ++GSLMY+TA+RPD+M VC
Sbjct: 272 EVIDRFGMQHHNPVCNPIAPGQKIGRDEAGEKIDSTLYKQMVGSLMYLTASRPDLMFVVC 331
Query: 359 LISRYELS 382
L+SR+ S
Sbjct: 332 LLSRFMAS 339
Score = 103 bits (257), Expect(2) = 4e-62
Identities = 51/80 (63%), Positives = 61/80 (76%)
Frame = +3
Query: 357 VLSADMNCPTQAHWLASKRSLRYLQGTLDLGIMYKKGGNSALIGYTDSDYAGDLEDRKST 536
+LS M PTQ H +KR LRYL+GTL+ GI YK G S L+ YTDSDYAGD++D KST
Sbjct: 332 LLSRFMASPTQLHLAVAKRVLRYLKGTLECGIWYKHGTISDLVAYTDSDYAGDMDDSKST 391
Query: 537 SRYAFLMSIGAVAWASKKQP 596
S YAF+MS GAVAW+S+KQP
Sbjct: 392 SGYAFMMSGGAVAWSSRKQP 411
>gb|KZV22085.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dorcoceras hygrometricum]
Length = 536
Score = 162 bits (411), Expect(2) = 4e-62
Identities = 80/128 (62%), Positives = 103/128 (80%), Gaps = 1/128 (0%)
Frame = +2
Query: 2 LYVDDLVYTGNDVNLLEEFKDLMKKEFSMTDLGKMKYFLGVEVTQL-EEGICISQRKYAA 178
+YVDDL++TGN+V LLEEFK MK+EF MTDLGKM+YFLG+EV Q E+G+ I QRKYAA
Sbjct: 212 VYVDDLLFTGNNVRLLEEFKCSMKREFDMTDLGKMRYFLGIEVVQNPEKGVFICQRKYAA 271
Query: 179 DILKRFDMVNCNSVKVPMVSGCKLGRDIEGEKVDSTLYKQLLGSLMYMTATRPDIMHAVC 358
+++ RF M + N V P+ G K+GRD GEK+DSTLYKQ++GSLMY+TA+RPD+M VC
Sbjct: 272 EMIDRFGMQHHNPVYNPIAPGQKIGRDEAGEKIDSTLYKQMVGSLMYLTASRPDLMFVVC 331
Query: 359 LISRYELS 382
L+SR+ S
Sbjct: 332 LLSRFMAS 339
Score = 103 bits (258), Expect(2) = 4e-62
Identities = 51/80 (63%), Positives = 61/80 (76%)
Frame = +3
Query: 357 VLSADMNCPTQAHWLASKRSLRYLQGTLDLGIMYKKGGNSALIGYTDSDYAGDLEDRKST 536
+LS M PTQ H +KR LRYL+GTL+ GI YK G S L+ YTDSDYAGD++D KST
Sbjct: 332 LLSRFMASPTQLHLAVAKRVLRYLKGTLEYGIWYKHGTMSDLVAYTDSDYAGDMDDSKST 391
Query: 537 SRYAFLMSIGAVAWASKKQP 596
S YAF+MS GAVAW+S+KQP
Sbjct: 392 SGYAFMMSGGAVAWSSRKQP 411
>gb|PRQ33949.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 425
Score = 164 bits (415), Expect(2) = 4e-62
Identities = 78/124 (62%), Positives = 100/124 (80%)
Frame = +2
Query: 2 LYVDDLVYTGNDVNLLEEFKDLMKKEFSMTDLGKMKYFLGVEVTQLEEGICISQRKYAAD 181
LYVDDL+YTGND ++ EFKD M KEF M+DLGKM+YFLG+EV QL++GI ISQ+KYA D
Sbjct: 107 LYVDDLIYTGNDDAMMREFKDSMMKEFDMSDLGKMRYFLGLEVQQLQDGIFISQKKYAMD 166
Query: 182 ILKRFDMVNCNSVKVPMVSGCKLGRDIEGEKVDSTLYKQLLGSLMYMTATRPDIMHAVCL 361
+L+RF M N+V P+V G K+ +D G +VD T YKQL+GSLMY+T+TRPD+M+AV L
Sbjct: 167 VLRRFGMEKSNAVLNPIVPGFKISKDESGIEVDGTFYKQLVGSLMYLTSTRPDLMYAVSL 226
Query: 362 ISRY 373
I+RY
Sbjct: 227 IARY 230
Score = 102 bits (254), Expect(2) = 4e-62
Identities = 48/75 (64%), Positives = 60/75 (80%)
Frame = +3
Query: 372 MNCPTQAHWLASKRSLRYLQGTLDLGIMYKKGGNSALIGYTDSDYAGDLEDRKSTSRYAF 551
M+ PT+ H +A+KR LRY++GT+ GI+YKK + L YTDSDYAG LEDRKSTS YAF
Sbjct: 231 MSQPTELHLMAAKRVLRYVKGTVGFGILYKKEASGVLTAYTDSDYAGCLEDRKSTSGYAF 290
Query: 552 LMSIGAVAWASKKQP 596
+MS GAVAW+S+KQP
Sbjct: 291 MMSSGAVAWSSRKQP 305
>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
Length = 2408
Score = 156 bits (395), Expect(2) = 1e-61
Identities = 79/127 (62%), Positives = 100/127 (78%)
Frame = +2
Query: 2 LYVDDLVYTGNDVNLLEEFKDLMKKEFSMTDLGKMKYFLGVEVTQLEEGICISQRKYAAD 181
LYVDDL++TGN+ ++ +FK+ MK EF MTDLGKMKYFL VEV Q EGI ISQRKYA D
Sbjct: 722 LYVDDLIFTGNNESMFVKFKNSMKLEFDMTDLGKMKYFLNVEVLQNLEGIYISQRKYAKD 781
Query: 182 ILKRFDMVNCNSVKVPMVSGCKLGRDIEGEKVDSTLYKQLLGSLMYMTATRPDIMHAVCL 361
+L+ F M NSVK P+V G +L +D EG KV++T+YKQL+GSLM++TATRPD+M+ V L
Sbjct: 782 VLEWFRMEKSNSVKNPIVPGVRLMKDEEGSKVNATMYKQLVGSLMHLTATRPDLMYVVSL 841
Query: 362 ISRYELS 382
ISR+ S
Sbjct: 842 ISRFMAS 848
Score = 108 bits (270), Expect(2) = 1e-61
Identities = 51/80 (63%), Positives = 64/80 (80%)
Frame = +3
Query: 357 VLSADMNCPTQAHWLASKRSLRYLQGTLDLGIMYKKGGNSALIGYTDSDYAGDLEDRKST 536
++S M PT+ H A+KR LRYL+GT+DLGI+Y+K GN LI YTDSDYAGD++DRKST
Sbjct: 841 LISRFMASPTELHLQAAKRVLRYLKGTVDLGILYQKEGNGELIAYTDSDYAGDVDDRKST 900
Query: 537 SRYAFLMSIGAVAWASKKQP 596
S Y FL+S G V+W+SKKQP
Sbjct: 901 SGYVFLLSEGVVSWSSKKQP 920
Score = 102 bits (254), Expect = 1e-21
Identities = 48/118 (40%), Positives = 78/118 (66%)
Frame = +2
Query: 2 LYVDDLVYTGNDVNLLEEFKDLMKKEFSMTDLGKMKYFLGVEVTQLEEGICISQRKYAAD 181
LYVDD++ TGND++ ++E KD + ++F M DLG + YFLG+E+T +G+ I+Q KYA+D
Sbjct: 2142 LYVDDMIITGNDLSGIQELKDFLSQQFEMKDLGHLSYFLGLEITHSTDGLYITQAKYASD 2201
Query: 182 ILKRFDMVNCNSVKVPMVSGCKLGRDIEGEKVDSTLYKQLLGSLMYMTATRPDIMHAV 355
+L + + + +V + L + +LY++L+GSL+Y+T TRPDI +AV
Sbjct: 2202 LLSQAGLTDSKNVDTLVELNAHLTPSRGKPLSNPSLYRRLVGSLVYLTVTRPDISYAV 2259
>gb|PRQ33299.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1363
Score = 162 bits (409), Expect(2) = 2e-61
Identities = 77/124 (62%), Positives = 99/124 (79%)
Frame = +2
Query: 2 LYVDDLVYTGNDVNLLEEFKDLMKKEFSMTDLGKMKYFLGVEVTQLEEGICISQRKYAAD 181
LYVDDL+YTGND ++ EFKD M KEF M+DLGKM+YFLG+EV QL++GI ISQ+KYA D
Sbjct: 1050 LYVDDLIYTGNDDAMMREFKDSMMKEFDMSDLGKMRYFLGLEVQQLQDGIFISQKKYAMD 1109
Query: 182 ILKRFDMVNCNSVKVPMVSGCKLGRDIEGEKVDSTLYKQLLGSLMYMTATRPDIMHAVCL 361
+L+RF M N+V P+V G K+ +D G +VD YKQL+GSLMY+T+TRPD+M+AV L
Sbjct: 1110 VLRRFGMEKSNAVLNPIVPGFKISKDESGIEVDGMFYKQLVGSLMYLTSTRPDLMYAVSL 1169
Query: 362 ISRY 373
I+RY
Sbjct: 1170 IARY 1173
Score = 102 bits (254), Expect(2) = 2e-61
Identities = 48/75 (64%), Positives = 60/75 (80%)
Frame = +3
Query: 372 MNCPTQAHWLASKRSLRYLQGTLDLGIMYKKGGNSALIGYTDSDYAGDLEDRKSTSRYAF 551
M+ PT+ H +A+KR LRY++GT+ GI+YKK + L YTDSDYAG LEDRKSTS YAF
Sbjct: 1174 MSQPTELHLMATKRVLRYVKGTVGFGILYKKEASGVLTAYTDSDYAGCLEDRKSTSGYAF 1233
Query: 552 LMSIGAVAWASKKQP 596
+MS GAVAW+S+KQP
Sbjct: 1234 MMSSGAVAWSSRKQP 1248
>gb|KYP44586.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 783
Score = 158 bits (400), Expect(2) = 2e-61
Identities = 75/123 (60%), Positives = 98/123 (79%)
Frame = +2
Query: 5 YVDDLVYTGNDVNLLEEFKDLMKKEFSMTDLGKMKYFLGVEVTQLEEGICISQRKYAADI 184
YVDDL+YTG+D + ++FK +M EF+MTDLGKM+YFLG+EV Q GI I Q+KY D+
Sbjct: 459 YVDDLIYTGSDELMFQQFKTIMMNEFAMTDLGKMRYFLGIEVLQSCTGIYIGQKKYIKDM 518
Query: 185 LKRFDMVNCNSVKVPMVSGCKLGRDIEGEKVDSTLYKQLLGSLMYMTATRPDIMHAVCLI 364
L RFDM +CNSVK P+ G +L ++ +G +VDST+YKQL+GSLMY+TATRPDI H+V LI
Sbjct: 519 LNRFDMSDCNSVKNPIAPGTRLLKEDKGTEVDSTIYKQLVGSLMYLTATRPDIAHSVSLI 578
Query: 365 SRY 373
SR+
Sbjct: 579 SRF 581
Score = 105 bits (263), Expect(2) = 2e-61
Identities = 50/80 (62%), Positives = 62/80 (77%)
Frame = +3
Query: 357 VLSADMNCPTQAHWLASKRSLRYLQGTLDLGIMYKKGGNSALIGYTDSDYAGDLEDRKST 536
++S M P ++H++A+KR LRYLQGT +LGI YK G N L YTDSDYAGDLEDRKST
Sbjct: 577 LISRFMEHPKESHFIAAKRILRYLQGTQNLGIFYKAGINEELFAYTDSDYAGDLEDRKST 636
Query: 537 SRYAFLMSIGAVAWASKKQP 596
S YAFL++ G ++W SKKQP
Sbjct: 637 SGYAFLLAGGVISWVSKKQP 656
>gb|PNX71231.1| copia-type polyprotein, partial [Trifolium pratense]
Length = 1017
Score = 158 bits (399), Expect(2) = 5e-61
Identities = 73/124 (58%), Positives = 97/124 (78%)
Frame = +2
Query: 2 LYVDDLVYTGNDVNLLEEFKDLMKKEFSMTDLGKMKYFLGVEVTQLEEGICISQRKYAAD 181
LYVDDL+YTG+D ++ EFK+ M KEF M+DLGKMKYFLG+EV Q + G+ ISQ KY +
Sbjct: 717 LYVDDLIYTGDDEKMMSEFKESMMKEFDMSDLGKMKYFLGIEVVQFDGGVFISQTKYVTE 776
Query: 182 ILKRFDMVNCNSVKVPMVSGCKLGRDIEGEKVDSTLYKQLLGSLMYMTATRPDIMHAVCL 361
+L+RF M + N V+ PMV G K+ +D G ++D + +KQL+GSLMY+TATRPDIM+AV L
Sbjct: 777 VLRRFGMEHSNPVENPMVPGFKISKDENGVELDGSFFKQLIGSLMYLTATRPDIMYAVSL 836
Query: 362 ISRY 373
+SRY
Sbjct: 837 LSRY 840
Score = 104 bits (260), Expect(2) = 5e-61
Identities = 49/80 (61%), Positives = 63/80 (78%)
Frame = +3
Query: 357 VLSADMNCPTQAHWLASKRSLRYLQGTLDLGIMYKKGGNSALIGYTDSDYAGDLEDRKST 536
+LS M+ PT+ H+ A+KR LRYLQGT GI+YK+ GN LIG+TDSDYAG +EDR+ST
Sbjct: 836 LLSRYMSRPTEVHYSAAKRILRYLQGTTKFGILYKREGNCELIGFTDSDYAGSVEDRRST 895
Query: 537 SRYAFLMSIGAVAWASKKQP 596
S Y F++S AVAW+S+KQP
Sbjct: 896 SGYVFMLSGAAVAWSSRKQP 915
>ref|XP_017192857.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Malus domestica]
Length = 403
Score = 164 bits (414), Expect(2) = 7e-61
Identities = 80/124 (64%), Positives = 97/124 (78%)
Frame = +2
Query: 2 LYVDDLVYTGNDVNLLEEFKDLMKKEFSMTDLGKMKYFLGVEVTQLEEGICISQRKYAAD 181
LYVDDL++TGND ++ E+FK M EF MTDLG+MKYF+G+EV Q +GI ISQRKYA
Sbjct: 85 LYVDDLIFTGNDESMFEQFKKSMMNEFDMTDLGRMKYFIGIEVVQKADGIFISQRKYAQK 144
Query: 182 ILKRFDMVNCNSVKVPMVSGCKLGRDIEGEKVDSTLYKQLLGSLMYMTATRPDIMHAVCL 361
+L+RF+M CNSV P+V G +L RD EG KVDST YKQ++GSLMY+TATRP IM V L
Sbjct: 145 VLERFNMEQCNSVHNPIVPGFRLTRDEEGVKVDSTFYKQMVGSLMYLTATRPYIMFTVSL 204
Query: 362 ISRY 373
ISRY
Sbjct: 205 ISRY 208
Score = 98.6 bits (244), Expect(2) = 7e-61
Identities = 45/80 (56%), Positives = 60/80 (75%)
Frame = +3
Query: 357 VLSADMNCPTQAHWLASKRSLRYLQGTLDLGIMYKKGGNSALIGYTDSDYAGDLEDRKST 536
++S M PT++H +A+ R LRY++GT + YKKG + LIGYTDSDYAGD +DRKST
Sbjct: 204 LISRYMEHPTESHLMAANRILRYIKGTAGFRMFYKKGRDEELIGYTDSDYAGDQDDRKST 263
Query: 537 SRYAFLMSIGAVAWASKKQP 596
S Y F+M+ G V+W+SKKQP
Sbjct: 264 SGYVFMMNSGVVSWSSKKQP 283
>gb|PNY07765.1| putative copia-type polyprotein [Trifolium pratense]
Length = 1321
Score = 167 bits (422), Expect(2) = 8e-61
Identities = 79/124 (63%), Positives = 99/124 (79%)
Frame = +2
Query: 2 LYVDDLVYTGNDVNLLEEFKDLMKKEFSMTDLGKMKYFLGVEVTQLEEGICISQRKYAAD 181
LYVDDL++TGND L +EFK M KEF MTDLG MKYFLG+EV Q GI I Q+KYA +
Sbjct: 1003 LYVDDLIFTGNDECLFKEFKQSMMKEFEMTDLGMMKYFLGIEVVQSAAGIFICQKKYAQE 1062
Query: 182 ILKRFDMVNCNSVKVPMVSGCKLGRDIEGEKVDSTLYKQLLGSLMYMTATRPDIMHAVCL 361
+L+RF M +CN V++P+V G KL RD+EG K+D+T YKQ++GSLMY+TATRPD+ +AV L
Sbjct: 1063 VLERFKMDDCNPVQIPIVPGTKLTRDVEGTKIDNTYYKQMVGSLMYITATRPDLTYAVSL 1122
Query: 362 ISRY 373
ISRY
Sbjct: 1123 ISRY 1126
Score = 95.1 bits (235), Expect(2) = 8e-61
Identities = 44/80 (55%), Positives = 60/80 (75%)
Frame = +3
Query: 357 VLSADMNCPTQAHWLASKRSLRYLQGTLDLGIMYKKGGNSALIGYTDSDYAGDLEDRKST 536
++S M PT+ H K+ LRYL+GT++ G+ YKK + L+G++DSDYAGDL+DRKST
Sbjct: 1122 LISRYMESPTELHHQVVKKILRYLKGTVNYGLFYKKSEINELVGFSDSDYAGDLDDRKST 1181
Query: 537 SRYAFLMSIGAVAWASKKQP 596
S Y FL+S AV+W+SKKQP
Sbjct: 1182 SGYVFLLSGAAVSWSSKKQP 1201
>gb|PNX85069.1| retrotransposon-related protein [Trifolium pratense]
Length = 538
Score = 151 bits (382), Expect(2) = 1e-60
Identities = 71/124 (57%), Positives = 96/124 (77%)
Frame = +2
Query: 2 LYVDDLVYTGNDVNLLEEFKDLMKKEFSMTDLGKMKYFLGVEVTQLEEGICISQRKYAAD 181
+YVDDL++TG+D ++ E+FK+ M EF M+DLGKM+YFLG+EV Q +GI I Q+KYA +
Sbjct: 220 IYVDDLIFTGDDESMFEDFKNSMMHEFDMSDLGKMRYFLGIEVLQRNDGIYICQKKYALE 279
Query: 182 ILKRFDMVNCNSVKVPMVSGCKLGRDIEGEKVDSTLYKQLLGSLMYMTATRPDIMHAVCL 361
+L+RF M NSV P+V G K+ +D EG KVD+T +KQ++GSLMY+T TRPD+M V L
Sbjct: 280 VLRRFGMEGSNSVHNPIVPGFKICKDKEGVKVDATFFKQVVGSLMYLTTTRPDLMFVVSL 339
Query: 362 ISRY 373
ISRY
Sbjct: 340 ISRY 343
Score = 110 bits (274), Expect(2) = 1e-60
Identities = 53/80 (66%), Positives = 62/80 (77%)
Frame = +3
Query: 357 VLSADMNCPTQAHWLASKRSLRYLQGTLDLGIMYKKGGNSALIGYTDSDYAGDLEDRKST 536
++S M PT+ H A+KR LRYL+GT D GI YKKGG+ L+ Y DSDYAGDLEDRKST
Sbjct: 339 LISRYMAQPTELHLQAAKRVLRYLKGTADFGIFYKKGGSENLVAYADSDYAGDLEDRKST 398
Query: 537 SRYAFLMSIGAVAWASKKQP 596
S Y FLMS GAV+W+SKKQP
Sbjct: 399 SGYVFLMSSGAVSWSSKKQP 418
>gb|KYP44456.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 416
Score = 157 bits (397), Expect(2) = 1e-60
Identities = 76/124 (61%), Positives = 98/124 (79%)
Frame = +2
Query: 2 LYVDDLVYTGNDVNLLEEFKDLMKKEFSMTDLGKMKYFLGVEVTQLEEGICISQRKYAAD 181
LYVDDL+YT ND +L+ FK+ MKKEF MTDLG+M++FLG+EV Q ++GI I QRKYA +
Sbjct: 220 LYVDDLIYTSNDESLMSAFKNSMKKEFDMTDLGRMRFFLGIEVLQEDDGIYIYQRKYALE 279
Query: 182 ILKRFDMVNCNSVKVPMVSGCKLGRDIEGEKVDSTLYKQLLGSLMYMTATRPDIMHAVCL 361
+L+RF M + N KVP+V GCKL +D G KVD T YKQL+GSLMY+TATR ++M +V L
Sbjct: 280 VLRRFGMSDSNFFKVPIVPGCKLSKDETGMKVDETRYKQLVGSLMYITATRLNLMFSVSL 339
Query: 362 ISRY 373
ISR+
Sbjct: 340 ISRF 343
Score = 104 bits (259), Expect(2) = 1e-60
Identities = 50/78 (64%), Positives = 61/78 (78%)
Frame = +3
Query: 357 VLSADMNCPTQAHWLASKRSLRYLQGTLDLGIMYKKGGNSALIGYTDSDYAGDLEDRKST 536
++S M+ PTQ H +KR LRYLQGT+D GI YKKGG+ L+ YT+SDYAG+L DRKST
Sbjct: 339 LISRFMSQPTQIHMQVAKRVLRYLQGTVDFGIFYKKGGDEELLAYTNSDYAGELVDRKST 398
Query: 537 SRYAFLMSIGAVAWASKK 590
S Y FL+S GAVAW+SKK
Sbjct: 399 SGYVFLLSNGAVAWSSKK 416
>dbj|GAU50131.1| hypothetical protein TSUD_192520 [Trifolium subterraneum]
Length = 1197
Score = 166 bits (420), Expect(2) = 2e-60
Identities = 78/124 (62%), Positives = 99/124 (79%)
Frame = +2
Query: 2 LYVDDLVYTGNDVNLLEEFKDLMKKEFSMTDLGKMKYFLGVEVTQLEEGICISQRKYAAD 181
LYVD+L+YTGN++ ++ EFKD MKK F+MTDLGKMKYFLGVEVTQ EE I I+Q KYA +
Sbjct: 882 LYVDNLIYTGNNMEMIHEFKDSMKKRFAMTDLGKMKYFLGVEVTQSEERIFINQHKYALE 941
Query: 182 ILKRFDMVNCNSVKVPMVSGCKLGRDIEGEKVDSTLYKQLLGSLMYMTATRPDIMHAVCL 361
ILKRF M NCN V P+V GCKL R+ +G D+ YKQ++GSLMY+ ATRPD+ ++VCL
Sbjct: 942 ILKRFGMENCNKVNSPIVPGCKLVREKDGNLTDAREYKQMVGSLMYLLATRPDLAYSVCL 1001
Query: 362 ISRY 373
+R+
Sbjct: 1002 TARF 1005
Score = 94.7 bits (234), Expect(2) = 2e-60
Identities = 45/77 (58%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Frame = +3
Query: 372 MNCPTQAHWLASKRSLRYLQGTLDLGIMYKKGGNSAL--IGYTDSDYAGDLEDRKSTSRY 545
M+ PT++H +A KR +RYL+GTL G+MYK G + L IG++DSDYAGDL+DRKSTS Y
Sbjct: 1006 MDKPTESHVMAIKRIMRYLKGTLAHGVMYKHGNGNKLELIGWSDSDYAGDLDDRKSTSDY 1065
Query: 546 AFLMSIGAVAWASKKQP 596
F + GA++W+SKKQP
Sbjct: 1066 VFKLGSGAISWSSKKQP 1082
>ref|XP_024190472.1| uncharacterized protein LOC112194469 [Rosa chinensis]
gb|PRQ45106.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 340
Score = 152 bits (384), Expect(2) = 2e-60
Identities = 73/124 (58%), Positives = 95/124 (76%)
Frame = +2
Query: 2 LYVDDLVYTGNDVNLLEEFKDLMKKEFSMTDLGKMKYFLGVEVTQLEEGICISQRKYAAD 181
+YVDDL+YTG+D ++ EFK M K F MTDLGKM++FLG+EV Q E+GI + QRKYA +
Sbjct: 10 VYVDDLIYTGDDEQMMLEFKVSMMKVFYMTDLGKMRFFLGIEVLQTEDGIYMGQRKYALE 69
Query: 182 ILKRFDMVNCNSVKVPMVSGCKLGRDIEGEKVDSTLYKQLLGSLMYMTATRPDIMHAVCL 361
+LKRF M N+V P+V G K+G+D G K+D T +KQ++GSLMY+TATRPD+M V L
Sbjct: 70 VLKRFGMEESNAVLNPIVPGVKVGKDKAGVKIDETYFKQIVGSLMYITATRPDLMFVVSL 129
Query: 362 ISRY 373
ISRY
Sbjct: 130 ISRY 133
Score = 108 bits (270), Expect(2) = 2e-60
Identities = 52/80 (65%), Positives = 63/80 (78%)
Frame = +3
Query: 357 VLSADMNCPTQAHWLASKRSLRYLQGTLDLGIMYKKGGNSALIGYTDSDYAGDLEDRKST 536
++S M PTQ +KR+LRYL+GT+D GI YKKGGN L+G+TDSDYAGDLEDRKST
Sbjct: 129 LISRYMARPTQLQLQIAKRALRYLKGTVDYGICYKKGGNKKLVGFTDSDYAGDLEDRKST 188
Query: 537 SRYAFLMSIGAVAWASKKQP 596
Y F++S GAVAW+SKKQP
Sbjct: 189 FGYVFMLSGGAVAWSSKKQP 208
>gb|PRQ52345.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1316
Score = 159 bits (402), Expect(2) = 2e-60
Identities = 78/124 (62%), Positives = 98/124 (79%)
Frame = +2
Query: 2 LYVDDLVYTGNDVNLLEEFKDLMKKEFSMTDLGKMKYFLGVEVTQLEEGICISQRKYAAD 181
LYVDDL++TGND + EEFK MK EF M+DLG M+YFLGVEV Q E GI I Q+KYA++
Sbjct: 998 LYVDDLIFTGNDEYMFEEFKKSMKDEFDMSDLGMMRYFLGVEVVQNEAGIYICQKKYASE 1057
Query: 182 ILKRFDMVNCNSVKVPMVSGCKLGRDIEGEKVDSTLYKQLLGSLMYMTATRPDIMHAVCL 361
IL+RF M NSV+ P+V G KL +D G KVD+T+YKQ++GSLMY+TATRPD+M+ V L
Sbjct: 1058 ILERFGMEKANSVRNPIVPGIKLMKDEGGVKVDATMYKQIVGSLMYLTATRPDLMYVVSL 1117
Query: 362 ISRY 373
ISR+
Sbjct: 1118 ISRF 1121
Score = 101 bits (251), Expect(2) = 2e-60
Identities = 45/80 (56%), Positives = 63/80 (78%)
Frame = +3
Query: 357 VLSADMNCPTQAHWLASKRSLRYLQGTLDLGIMYKKGGNSALIGYTDSDYAGDLEDRKST 536
++S M+ PT+ H A+KR LRYL+GT++LG++Y++ G L +TDSDYAGD++DRKST
Sbjct: 1117 LISRFMSSPTELHMQAAKRVLRYLKGTINLGVLYRRNGEEKLEAFTDSDYAGDVDDRKST 1176
Query: 537 SRYAFLMSIGAVAWASKKQP 596
S Y F+ S GAV+W+SKKQP
Sbjct: 1177 SGYIFMFSDGAVSWSSKKQP 1196
>gb|PNY15642.1| copia-type polyprotein [Trifolium pratense]
Length = 822
Score = 168 bits (426), Expect(2) = 3e-60
Identities = 78/124 (62%), Positives = 99/124 (79%)
Frame = +2
Query: 2 LYVDDLVYTGNDVNLLEEFKDLMKKEFSMTDLGKMKYFLGVEVTQLEEGICISQRKYAAD 181
LYVDDL+YTGND ++EEFK MKK+F+MTDLGKMKYFLGVEV Q ++GI I+Q+KYA+D
Sbjct: 502 LYVDDLIYTGNDKQMMEEFKGSMKKKFAMTDLGKMKYFLGVEVNQTQQGIFINQQKYASD 561
Query: 182 ILKRFDMVNCNSVKVPMVSGCKLGRDIEGEKVDSTLYKQLLGSLMYMTATRPDIMHAVCL 361
IL RF M +CN V P+V GCKL +D G D+T YKQ++G LMY+ ATRPD+ ++VCL
Sbjct: 562 ILTRFGMQDCNKVCTPIVPGCKLVKDENGRPADATSYKQMIGCLMYLLATRPDLTYSVCL 621
Query: 362 ISRY 373
+RY
Sbjct: 622 AARY 625
Score = 91.7 bits (226), Expect(2) = 3e-60
Identities = 43/77 (55%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Frame = +3
Query: 372 MNCPTQAHWLASKRSLRYLQGTLDLGIMYKKGG--NSALIGYTDSDYAGDLEDRKSTSRY 545
M+ PT+ H +A KR +RYL+GT+ GI+YK N L+G+TDSDYAGD +DRKSTS Y
Sbjct: 626 MDKPTEMHVIAVKRIMRYLKGTMSYGILYKSTDEENVTLVGWTDSDYAGDYDDRKSTSGY 685
Query: 546 AFLMSIGAVAWASKKQP 596
F + GA++W+SKKQP
Sbjct: 686 VFSIGTGAISWSSKKQP 702
>dbj|GAU29997.1| hypothetical protein TSUD_160820 [Trifolium subterraneum]
Length = 1245
Score = 162 bits (409), Expect(2) = 4e-60
Identities = 79/124 (63%), Positives = 98/124 (79%)
Frame = +2
Query: 2 LYVDDLVYTGNDVNLLEEFKDLMKKEFSMTDLGKMKYFLGVEVTQLEEGICISQRKYAAD 181
LYVDDL+YTGND L E+FK M+ +F+MTDLGKM+YFLGVEVTQ E GI ISQ+KYA +
Sbjct: 926 LYVDDLIYTGNDSKLFEDFKHSMQGKFAMTDLGKMRYFLGVEVTQSEHGIMISQQKYAKE 985
Query: 182 ILKRFDMVNCNSVKVPMVSGCKLGRDIEGEKVDSTLYKQLLGSLMYMTATRPDIMHAVCL 361
IL RF M CNSV P+V G KL +D G+ VD+T YKQ++G LMY+ ATRPD+ ++VCL
Sbjct: 986 ILARFGMEACNSVGSPIVPGNKLTKDENGKLVDATKYKQMVGCLMYLLATRPDLAYSVCL 1045
Query: 362 ISRY 373
I+RY
Sbjct: 1046 IARY 1049
Score = 97.8 bits (242), Expect(2) = 4e-60
Identities = 43/75 (57%), Positives = 58/75 (77%)
Frame = +3
Query: 372 MNCPTQAHWLASKRSLRYLQGTLDLGIMYKKGGNSALIGYTDSDYAGDLEDRKSTSRYAF 551
M+ PT+ H A+KR LRYL+G++ LG++YK+G N L+G+TDSDYAGD +DRKSTS Y F
Sbjct: 1050 MDKPTEIHSAAAKRILRYLKGSISLGVLYKRGKNQELVGWTDSDYAGDSDDRKSTSGYVF 1109
Query: 552 LMSIGAVAWASKKQP 596
A++W+SKKQP
Sbjct: 1110 KFGSSAISWSSKKQP 1124
>gb|PRQ42077.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1044
Score = 159 bits (401), Expect(2) = 4e-60
Identities = 78/124 (62%), Positives = 98/124 (79%)
Frame = +2
Query: 2 LYVDDLVYTGNDVNLLEEFKDLMKKEFSMTDLGKMKYFLGVEVTQLEEGICISQRKYAAD 181
LYVDDL++TGND + EEFK MK EF M+DLG M+YFLGVEV Q E GI I Q+KYA++
Sbjct: 726 LYVDDLIFTGNDEYMFEEFKKSMKDEFDMSDLGMMRYFLGVEVVQNEAGIYICQKKYASE 785
Query: 182 ILKRFDMVNCNSVKVPMVSGCKLGRDIEGEKVDSTLYKQLLGSLMYMTATRPDIMHAVCL 361
IL+RF M NSV+ P+V G KL +D G KVD+T+YKQ++GSLMY+TATRPD+M+ V L
Sbjct: 786 ILERFGMEKANSVRNPIVPGFKLMKDEGGVKVDATMYKQIVGSLMYLTATRPDLMYVVSL 845
Query: 362 ISRY 373
ISR+
Sbjct: 846 ISRF 849
Score = 100 bits (250), Expect(2) = 4e-60
Identities = 45/80 (56%), Positives = 63/80 (78%)
Frame = +3
Query: 357 VLSADMNCPTQAHWLASKRSLRYLQGTLDLGIMYKKGGNSALIGYTDSDYAGDLEDRKST 536
++S M+ PT+ H A+KR LRYL+GT++LG++Y++ G L +TDSDYAGD++DRKST
Sbjct: 845 LISRFMSSPTELHMQAAKRVLRYLKGTVNLGVLYRRNGEEKLEAFTDSDYAGDVDDRKST 904
Query: 537 SRYAFLMSIGAVAWASKKQP 596
S Y F+ S GAV+W+SKKQP
Sbjct: 905 SGYIFMFSDGAVSWSSKKQP 924
>gb|PNX96091.1| retrotransposon-related protein [Trifolium pratense]
Length = 1326
Score = 154 bits (388), Expect(2) = 5e-60
Identities = 74/124 (59%), Positives = 96/124 (77%)
Frame = +2
Query: 2 LYVDDLVYTGNDVNLLEEFKDLMKKEFSMTDLGKMKYFLGVEVTQLEEGICISQRKYAAD 181
+YVDDL++TGN ++ EFK+ M +EF M+DLGKM+YFLG+EV Q +GI I QRKYA++
Sbjct: 1008 VYVDDLIFTGNCEVMMSEFKNSMLREFDMSDLGKMRYFLGIEVLQKPDGIYICQRKYASE 1067
Query: 182 ILKRFDMVNCNSVKVPMVSGCKLGRDIEGEKVDSTLYKQLLGSLMYMTATRPDIMHAVCL 361
+LKRF M+ N V P+V G K+ R+ +G VD T YKQL+GSLMY+TATRPD+M A CL
Sbjct: 1068 VLKRFGMMESNLVTSPIVPGFKVSRNGDGNIVDETYYKQLVGSLMYLTATRPDMMFATCL 1127
Query: 362 ISRY 373
ISRY
Sbjct: 1128 ISRY 1131
Score = 105 bits (262), Expect(2) = 5e-60
Identities = 51/80 (63%), Positives = 61/80 (76%)
Frame = +3
Query: 357 VLSADMNCPTQAHWLASKRSLRYLQGTLDLGIMYKKGGNSALIGYTDSDYAGDLEDRKST 536
++S M P Q H A+KR LRYL+GT++ GI YKKGG+ L+ +TDSDYAGD EDRKST
Sbjct: 1127 LISRYMTKPMQTHLQAAKRLLRYLKGTVNYGIYYKKGGDGELLAFTDSDYAGDEEDRKST 1186
Query: 537 SRYAFLMSIGAVAWASKKQP 596
S Y FLMS GAV+W SKKQP
Sbjct: 1187 SGYVFLMSSGAVSWCSKKQP 1206