BLASTX nr result

ID: Astragalus24_contig00018499 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00018499
         (534 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX83603.1| hypothetical protein L195_g039647, partial [Trifo...    54   1e-06

>gb|PNX83603.1| hypothetical protein L195_g039647, partial [Trifolium pratense]
          Length = 340

 Score = 53.5 bits (127), Expect(2) = 1e-06
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = -2

Query: 506 HTKDRCFKLHGFPPGYKKQKVVATQQNV 423
           H KD+CFKLHG+PPGYKK K +ATQQ+V
Sbjct: 60  HVKDKCFKLHGYPPGYKKGKSIATQQSV 87



 Score = 26.2 bits (56), Expect(2) = 1e-06
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -3

Query: 373 QHQQLIQYMQVQMARAS 323
           Q+QQLI Y+Q QMAR S
Sbjct: 103 QYQQLIAYIQGQMARQS 119


Top