BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00017725
         (356 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX92994.1| Ty3/gypsy retrotransposon protein [Trifolium prat...    57   8e-07

>gb|PNX92994.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1476

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 36/87 (41%), Positives = 51/87 (58%)
 Frame = -1

Query: 263 TRSMSDLDRKIDENHAEVNSRIVELRETMNTVNAGMEELRNLIISQGRGPSQESXXXXXX 84
           T S++DL+++ID NHAEVN+RI +L  +M   NAG+EE+RNL+  + R  +  S      
Sbjct: 5   TPSIADLEKRIDGNHAEVNTRIEQLNVSM---NAGLEEIRNLL--RDRNDAASSNHGGGH 59

Query: 83  XXXXXPRAQTEAIPPRNYSTRISKIDF 3
                  +     P   YSTRISK+DF
Sbjct: 60  RYLRNEDSNRNHHP---YSTRISKVDF 83