BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00017665
         (1391 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNY05331.1| ribonuclease H [Trifolium pratense]                     52   3e-15
dbj|GAU24184.1| hypothetical protein TSUD_84190 [Trifolium subte...    49   3e-14
dbj|GAU34195.1| hypothetical protein TSUD_162960 [Trifolium subt...    64   3e-12
dbj|GAU10666.1| hypothetical protein TSUD_425710, partial [Trifo...    64   4e-12
dbj|GAU16646.1| hypothetical protein TSUD_325960 [Trifolium subt...    64   5e-12
dbj|GAU31243.1| hypothetical protein TSUD_149290 [Trifolium subt...    62   1e-11
dbj|GAU22350.1| hypothetical protein TSUD_106780 [Trifolium subt...    42   1e-11
dbj|GAU23820.1| hypothetical protein TSUD_27290 [Trifolium subte...    60   5e-11
gb|PNX62930.1| ribonuclease H, partial [Trifolium pratense] >gi|...    41   6e-11
dbj|GAU50297.1| hypothetical protein TSUD_288310 [Trifolium subt...    59   8e-11
gb|PNX91672.1| ribonuclease H [Trifolium pratense]                     44   9e-11
dbj|GAU27944.1| hypothetical protein TSUD_146590 [Trifolium subt...    58   1e-10
dbj|GAU26057.1| hypothetical protein TSUD_225190 [Trifolium subt...    39   1e-10
dbj|GAU17063.1| hypothetical protein TSUD_105620 [Trifolium subt...    60   2e-10
dbj|GAU47648.1| hypothetical protein TSUD_27720 [Trifolium subte...    57   5e-10
dbj|GAU48622.1| hypothetical protein TSUD_133530 [Trifolium subt...    59   2e-09
dbj|GAU50646.1| hypothetical protein TSUD_333850 [Trifolium subt...    55   2e-09
dbj|GAU35042.1| hypothetical protein TSUD_30080 [Trifolium subte...    54   4e-09
dbj|GAU12548.1| hypothetical protein TSUD_182620 [Trifolium subt...    40   6e-09
gb|PNX95949.1| ribonuclease H [Trifolium pratense]                     65   8e-09

>gb|PNY05331.1| ribonuclease H [Trifolium pratense]
          Length = 117

 Score = 52.0 bits (123), Expect(3) = 3e-15
 Identities = 22/47 (46%), Positives = 30/47 (63%)
 Frame = -3

Query: 1308 LLRHSDETWITSFAGSVGHSTIHHVELLALYFKLKVGWKKGFRESIC 1168
            L+R+SD  W+  F G++G S I H ELLA+Y+ L + W  GF E  C
Sbjct: 36   LIRNSDGVWVHGFVGNIGFSNILHAELLAIYYGLVLAWDFGFTELWC 82



 Score = 41.6 bits (96), Expect(3) = 3e-15
 Identities = 18/34 (52%), Positives = 25/34 (73%)
 Frame = -1

Query: 1169 ANSMLAIYLVSNDLNHWHHYASIISNTKELLEKE 1068
            ++S  AI L+S  +N WHHYA+II N KELL ++
Sbjct: 84   SDSKSAIKLISETVNTWHHYAAIIHNIKELLARD 117



 Score = 38.5 bits (88), Expect(3) = 3e-15
 Identities = 15/22 (68%), Positives = 19/22 (86%)
 Frame = -2

Query: 1369 VVLNVDGSSLGNPSLSGFNGFV 1304
            ++LNVDGSSLGNP +SGF G +
Sbjct: 16   MILNVDGSSLGNPGISGFGGLI 37


>dbj|GAU24184.1| hypothetical protein TSUD_84190 [Trifolium subterraneum]
          Length = 266

 Score = 49.3 bits (116), Expect(3) = 3e-14
 Identities = 20/47 (42%), Positives = 30/47 (63%)
 Frame = -3

Query: 1308 LLRHSDETWITSFAGSVGHSTIHHVELLALYFKLKVGWKKGFRESIC 1168
            L+++ D TW+  FAG++G S I H ELLA+Y  L + WK   ++  C
Sbjct: 185  LIQNFDRTWVHGFAGNIGFSNILHAELLAMYHGLVLAWKLNIKDMWC 231



 Score = 41.2 bits (95), Expect(3) = 3e-14
 Identities = 18/33 (54%), Positives = 25/33 (75%)
 Frame = -1

Query: 1169 ANSMLAIYLVSNDLNHWHHYASIISNTKELLEK 1071
            ++S  AI L+S+ +N WHHYA+II N K+LL K
Sbjct: 233  SDSKTAIKLLSDHVNEWHHYAAIIYNIKDLLTK 265



 Score = 37.7 bits (86), Expect(3) = 3e-14
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -2

Query: 1369 VVLNVDGSSLGNPSLSGFNGFV 1304
            ++LNVDGSS+GNP +SGF G +
Sbjct: 165  MILNVDGSSIGNPGISGFGGLI 186


>dbj|GAU34195.1| hypothetical protein TSUD_162960 [Trifolium subterraneum]
          Length = 168

 Score = 64.3 bits (155), Expect(2) = 3e-12
 Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 6/134 (4%)
 Frame = -3

Query: 1308 LLRHSDETWITSFAGSVGHSTIHHVELLALYFKLKVGWKKGFRESICKFYACYLXXXXXX 1129
            L+R+SD  W+  FAG++GHS I H ELLA+Y  L + W+   ++ +C    CY       
Sbjct: 32   LIRNSDGAWVHGFAGNIGHSNILHAELLAIYHGLVLAWELDIKD-LC----CYSDSKTAL 86

Query: 1128 XSLAPLCVNH*QYQRIARE------RDWRVQIVHTWREANAAADCFELLGKSICFLRLLQ 967
              +         Y  I         R+WRV++VHT RE N  AD              L 
Sbjct: 87   KLIYDHVNEWHHYAAIIYNIKDFLSRNWRVRLVHTLREGNNCAD-------------FLA 133

Query: 966  EDASRTPDARTTIA 925
            +  +R P+A ++IA
Sbjct: 134  KFGARNPEAYSSIA 147



 Score = 37.7 bits (86), Expect(2) = 3e-12
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -2

Query: 1369 VVLNVDGSSLGNPSLSGFNGFV 1304
            ++LNVDGSS+GNP +SGF G +
Sbjct: 12   MILNVDGSSIGNPGISGFGGLI 33


>dbj|GAU10666.1| hypothetical protein TSUD_425710, partial [Trifolium subterraneum]
          Length = 157

 Score = 63.9 bits (154), Expect(2) = 4e-12
 Identities = 42/134 (31%), Positives = 61/134 (45%), Gaps = 6/134 (4%)
 Frame = -3

Query: 1308 LLRHSDETWITSFAGSVGHSTIHHVELLALYFKLKVGWKKGFRESICKFYACYLXXXXXX 1129
            L+R+SD  W+  FAG++GHS I H ELLA+Y  L + W+   ++  C     Y       
Sbjct: 32   LIRNSDRAWVHGFAGNIGHSNILHAELLAIYHGLVLAWELDIKDLYC-----YSDSKTAL 86

Query: 1128 XSLAPLCVNH*QYQRIARE------RDWRVQIVHTWREANAAADCFELLGKSICFLRLLQ 967
              +         Y  I         R+WRV++VHT RE N  AD              L 
Sbjct: 87   KLIYDHVNEWHHYAAIIYNIKDILSRNWRVRLVHTLREGNNCAD-------------FLA 133

Query: 966  EDASRTPDARTTIA 925
            +  +R P+A ++IA
Sbjct: 134  KFGARNPEAYSSIA 147



 Score = 37.7 bits (86), Expect(2) = 4e-12
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -2

Query: 1369 VVLNVDGSSLGNPSLSGFNGFV 1304
            ++LNVDGSS+GNP +SGF G +
Sbjct: 12   MILNVDGSSIGNPGISGFGGLI 33


>dbj|GAU16646.1| hypothetical protein TSUD_325960 [Trifolium subterraneum]
          Length = 157

 Score = 63.5 bits (153), Expect(2) = 5e-12
 Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
 Frame = -3

Query: 1308 LLRHSDETWITSFAGSVGHSTIHHVELLALYFKLKVGWKKGFRESICKFYACYLXXXXXX 1129
            L+R+SD  WI  FAG++GHS I H ELLA+Y  L + W+   ++ +C    CY       
Sbjct: 21   LIRNSDGAWIHGFAGNIGHSNILHAELLAIYHGLVLAWELDIKD-LC----CYSDSKTAL 75

Query: 1128 XSLAPLCVNH*QYQRIARE------RDWRVQIVHTWREANAAADCFELLG 997
              +         Y  I         R+WRV++VHT RE N  AD     G
Sbjct: 76   KLIYDHVNEWHHYAAIIYNIKDFLSRNWRVRLVHTLREGNNCADFLAKFG 125



 Score = 37.7 bits (86), Expect(2) = 5e-12
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -2

Query: 1369 VVLNVDGSSLGNPSLSGFNGFV 1304
            ++LNVDGSS+GNP +SGF G +
Sbjct: 1    MILNVDGSSIGNPGISGFGGLI 22


>dbj|GAU31243.1| hypothetical protein TSUD_149290 [Trifolium subterraneum]
          Length = 168

 Score = 62.4 bits (150), Expect(2) = 1e-11
 Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
 Frame = -3

Query: 1308 LLRHSDETWITSFAGSVGHSTIHHVELLALYFKLKVGWKKGFRESICKFYACYLXXXXXX 1129
            L+R+SD  W+  F G++GHS I H ELLA+Y  L + W+   ++ +C    CY       
Sbjct: 32   LIRNSDGAWVHGFVGNIGHSNILHAELLAIYHGLVLAWELDIKD-LC----CYSDSKTAI 86

Query: 1128 XSLAPLCVNH*QYQRIA------RERDWRVQIVHTWREANAAADCFELLGK 994
              L+       QY  I         R+WRV++VHT RE N   +C   L K
Sbjct: 87   KLLSDHVNEWHQYAAIIYNIKNFLSRNWRVRLVHTLREGN---NCTYFLAK 134



 Score = 37.7 bits (86), Expect(2) = 1e-11
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -2

Query: 1369 VVLNVDGSSLGNPSLSGFNGFV 1304
            ++LNVDGSS+GNP +SGF G +
Sbjct: 12   MILNVDGSSIGNPGISGFGGLI 33


>dbj|GAU22350.1| hypothetical protein TSUD_106780 [Trifolium subterraneum]
          Length = 1200

 Score = 41.6 bits (96), Expect(3) = 1e-11
 Identities = 18/47 (38%), Positives = 29/47 (61%)
 Frame = -3

Query: 1308 LLRHSDETWITSFAGSVGHSTIHHVELLALYFKLKVGWKKGFRESIC 1168
            L+R++D  WI  F G++G + I H EL+A+Y  L + W+   +E  C
Sbjct: 1119 LIRNADGAWIHGFFGNLGVTNILHPELMAIYKGLLLAWELNIKELWC 1165



 Score = 39.7 bits (91), Expect(3) = 1e-11
 Identities = 14/34 (41%), Positives = 28/34 (82%)
 Frame = -1

Query: 1169 ANSMLAIYLVSNDLNHWHHYASIISNTKELLEKE 1068
            ++S +AI L+++  + WHHYA+I++N K++L++E
Sbjct: 1167 SDSKMAIKLITDPTDVWHHYAAILNNIKDILDRE 1200



 Score = 37.7 bits (86), Expect(3) = 1e-11
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -2

Query: 1369 VVLNVDGSSLGNPSLSGFNGFV 1304
            ++LNVDGSS+GNP +SGF G +
Sbjct: 1099 LILNVDGSSIGNPGISGFGGLI 1120


>dbj|GAU23820.1| hypothetical protein TSUD_27290 [Trifolium subterraneum]
          Length = 168

 Score = 60.1 bits (144), Expect(2) = 5e-11
 Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
 Frame = -3

Query: 1308 LLRHSDETWITSFAGSVGHSTIHHVELLALYFKLKVGWKKGFRESICKFYACYLXXXXXX 1129
            L+R+SD TW+  FAG++G S I H ELLA+Y  L + W+   ++       CY       
Sbjct: 32   LIRNSDGTWVHGFAGNIGFSNILHAELLAVYHGLVLVWELNIKD-----LWCYSDSRTAI 86

Query: 1128 XSLAPLCVNH*QYQRIARE------RDWRVQIVHTWREANAAADCFELLG 997
              L+        Y  I         R+WRV+++HT RE N  AD     G
Sbjct: 87   KLLSNHVNEWHHYAAIIYNIKDLLTRNWRVKLMHTLREGNTCADFLAKFG 136



 Score = 37.7 bits (86), Expect(2) = 5e-11
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -2

Query: 1369 VVLNVDGSSLGNPSLSGFNGFV 1304
            ++LNVDGSS+GNP +SGF G +
Sbjct: 12   MILNVDGSSIGNPGISGFGGLI 33


>gb|PNX62930.1| ribonuclease H, partial [Trifolium pratense]
 gb|PNX70908.1| ribonuclease H, partial [Trifolium pratense]
          Length = 104

 Score = 40.8 bits (94), Expect(3) = 6e-11
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -3

Query: 1308 LLRHSDETWITSFAGSVGHSTIHHVELLALYFKLKVGWKKGFRESIC 1168
            ++ ++D TW+  F G+ G + I H EL+A+Y  L + W+    +S C
Sbjct: 21   IIGNADGTWVHGFVGNFGVTNILHAELMAIYKGLHLAWELNITDSWC 67



 Score = 39.7 bits (91), Expect(3) = 6e-11
 Identities = 13/33 (39%), Positives = 26/33 (78%)
 Frame = -1

Query: 1169 ANSMLAIYLVSNDLNHWHHYASIISNTKELLEK 1071
            +NS++ + L++  ++ WHHYA+II+N K++L +
Sbjct: 69   SNSVMTLKLITETVDEWHHYAAIINNIKDILNR 101



 Score = 36.6 bits (83), Expect(3) = 6e-11
 Identities = 13/22 (59%), Positives = 19/22 (86%)
 Frame = -2

Query: 1369 VVLNVDGSSLGNPSLSGFNGFV 1304
            ++LNVDGSS+GNP +SG+ G +
Sbjct: 1    MILNVDGSSIGNPGISGYGGII 22


>dbj|GAU50297.1| hypothetical protein TSUD_288310 [Trifolium subterraneum]
          Length = 545

 Score = 59.3 bits (142), Expect(2) = 8e-11
 Identities = 44/138 (31%), Positives = 62/138 (44%), Gaps = 18/138 (13%)
 Frame = -3

Query: 1308 LLRHSDETWITSFAGSVGHSTIHHVELLALYFKLKVGWKKGFRESICKFYACYLXXXXXX 1129
            L+R+SD  W+  FAG++GH  I   ELLA+Y  L + W+   ++ +C    CY       
Sbjct: 409  LIRNSDGAWVHGFAGNIGHLNILQAELLAIYHGLVLAWELDIKD-LC----CYSDSKTAL 463

Query: 1128 XSLAPLCVNH*QYQRIA------RERDWRVQIVHTWREANAAADCFELLG----KSICFL 979
              +        QY  I         R+WRV++VH  RE N  AD  +  G    K+ C +
Sbjct: 464  KLIYDHVNEWHQYAAIIYNIKDFLSRNWRVRLVHMLREGNNCADILDKFGARNPKAYCSI 523

Query: 978  R--------LLQEDASRT 949
                     LL  DAS T
Sbjct: 524  AVPPDGMSLLLLADASGT 541



 Score = 37.7 bits (86), Expect(2) = 8e-11
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -2

Query: 1369 VVLNVDGSSLGNPSLSGFNGFV 1304
            ++LNVDGSS+GNP +SGF G +
Sbjct: 389  MILNVDGSSIGNPGISGFGGLI 410


>gb|PNX91672.1| ribonuclease H [Trifolium pratense]
          Length = 255

 Score = 43.5 bits (101), Expect(3) = 9e-11
 Identities = 16/34 (47%), Positives = 28/34 (82%)
 Frame = -1

Query: 1169 ANSMLAIYLVSNDLNHWHHYASIISNTKELLEKE 1068
            ++S+ AI L+S+ +N WHHYA+I++N KE+L ++
Sbjct: 200  SDSVTAIKLISDPVNEWHHYATILNNIKEILNRD 233



 Score = 38.1 bits (87), Expect(3) = 9e-11
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -3

Query: 1308 LLRHSDETWITSFAGSVGHSTIHHVELLALYFKLKVGWKKGFRESIC 1168
            L+ ++D  W+  F G++G + I H EL+A+Y  L + W+   +E  C
Sbjct: 152  LICNADGAWVHGFFGNLGVTNILHAELMAIYKGLLLVWEMNIKELWC 198



 Score = 34.7 bits (78), Expect(3) = 9e-11
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = -2

Query: 1369 VVLNVDGSSLGNPSLSGFNGFV 1304
            ++LNVDGSS+GNP + GF G +
Sbjct: 132  MILNVDGSSIGNPVIFGFGGLI 153


>dbj|GAU27944.1| hypothetical protein TSUD_146590 [Trifolium subterraneum]
          Length = 204

 Score = 58.2 bits (139), Expect(2) = 1e-10
 Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 6/134 (4%)
 Frame = -3

Query: 1308 LLRHSDETWITSFAGSVGHSTIHHVELLALYFKLKVGWKKGFRESICKFYACYLXXXXXX 1129
            L+R+SD  W+  FA ++G S I H ELLA+Y  L + W+   ++       CY       
Sbjct: 68   LIRNSDGAWVHGFAENIGFSNIFHAELLAVYHGLVLAWELNIKD-----LWCYSDSKTAI 122

Query: 1128 XSLAPLCVNH*QYQRIARE------RDWRVQIVHTWREANAAADCFELLGKSICFLRLLQ 967
              L+       QY  I         R+WRV+++HT R+ N  AD              L 
Sbjct: 123  KLLSDHVNEWHQYAAIIYNIKDLFTRNWRVRLMHTLRKGNTCAD-------------FLA 169

Query: 966  EDASRTPDARTTIA 925
            +  +R P+  T IA
Sbjct: 170  KFGARNPEVYTPIA 183



 Score = 38.5 bits (88), Expect(2) = 1e-10
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -2

Query: 1369 VVLNVDGSSLGNPSLSGFNGFV 1304
            ++LNVDGSS+GNP +SGF G +
Sbjct: 48   IILNVDGSSIGNPGISGFGGLI 69


>dbj|GAU26057.1| hypothetical protein TSUD_225190 [Trifolium subterraneum]
          Length = 536

 Score = 39.3 bits (90), Expect(3) = 1e-10
 Identities = 15/47 (31%), Positives = 29/47 (61%)
 Frame = -3

Query: 1308 LLRHSDETWITSFAGSVGHSTIHHVELLALYFKLKVGWKKGFRESIC 1168
            L+R++D  W+  F G++G + I H +L+A+Y  L + W+   ++  C
Sbjct: 455  LIRNADGAWVHGFFGNLGVNNILHAKLMAIYKGLLLAWELNIKDLWC 501



 Score = 38.9 bits (89), Expect(3) = 1e-10
 Identities = 15/23 (65%), Positives = 20/23 (86%)
 Frame = -2

Query: 1372 TVVLNVDGSSLGNPSLSGFNGFV 1304
            +++LNVDGSSLGNP +SGF G +
Sbjct: 434  SMILNVDGSSLGNPGISGFGGLI 456



 Score = 37.7 bits (86), Expect(3) = 1e-10
 Identities = 13/34 (38%), Positives = 25/34 (73%)
 Frame = -1

Query: 1169 ANSMLAIYLVSNDLNHWHHYASIISNTKELLEKE 1068
            ++S +AI L+S  ++ WHHY +I +N K++L ++
Sbjct: 503  SDSEMAIKLISEPVDQWHHYTAIFNNIKDILRRD 536


>dbj|GAU17063.1| hypothetical protein TSUD_105620 [Trifolium subterraneum]
          Length = 440

 Score = 60.5 bits (145), Expect(2) = 2e-10
 Identities = 37/110 (33%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
 Frame = -3

Query: 1308 LLRHSDETWITSFAGSVGHSTIHHVELLALYFKLKVGWKKGFRESICKFYACYLXXXXXX 1129
            L+R+S   WI  FAG++G S I H ELLA+Y  L + W    ++ IC     Y       
Sbjct: 304  LIRNSHGAWIRGFAGNIGFSNILHAELLAVYHGLVLAWDMDIKDLIC-----YSDSKTAI 358

Query: 1128 XSLAPLCVNH*QYQRIARE------RDWRVQIVHTWREANAAADCFELLG 997
              +         +  I +       RDWRV + HT RE NA AD     G
Sbjct: 359  KLIGDPINEWHHFAAILQNIKDILARDWRVTVAHTLREGNACADYLAKFG 408



 Score = 35.4 bits (80), Expect(2) = 2e-10
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = -2

Query: 1369 VVLNVDGSSLGNPSLSGFNGFV 1304
            ++LNVDGSS+GNP + GF G +
Sbjct: 284  MILNVDGSSIGNPEIYGFGGLI 305


>dbj|GAU47648.1| hypothetical protein TSUD_27720 [Trifolium subterraneum]
          Length = 521

 Score = 57.0 bits (136), Expect(2) = 5e-10
 Identities = 36/110 (32%), Positives = 47/110 (42%), Gaps = 6/110 (5%)
 Frame = -3

Query: 1308 LLRHSDETWITSFAGSVGHSTIHHVELLALYFKLKVGWKKGFRESICKFYACYLXXXXXX 1129
            L+ +S   W   F G++G S I H EL+ALY  L + W+   +E       CY       
Sbjct: 385  LIHNSKGAWAHGFVGNIGFSNILHAELMALYHGLLLAWQLNIKE-----LWCYSDSETAI 439

Query: 1128 XSLAPLCVNH*QYQRIARE------RDWRVQIVHTWREANAAADCFELLG 997
              +         Y  I         R+WRV I HT+RE NA AD    LG
Sbjct: 440  KLITEPVDEWHHYAAILLNIKDILAREWRVNIAHTFREGNACADYLAKLG 489



 Score = 37.4 bits (85), Expect(2) = 5e-10
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -2

Query: 1369 VVLNVDGSSLGNPSLSGFNGFV 1304
            ++LNVDGSS+GNP +SGF G +
Sbjct: 365  MILNVDGSSIGNPGVSGFGGLI 386


>dbj|GAU48622.1| hypothetical protein TSUD_133530 [Trifolium subterraneum]
          Length = 350

 Score = 59.3 bits (142), Expect(2) = 2e-09
 Identities = 35/104 (33%), Positives = 48/104 (46%)
 Frame = -3

Query: 1308 LLRHSDETWITSFAGSVGHSTIHHVELLALYFKLKVGWKKGFRESICKFYACYLXXXXXX 1129
            L+R+S+  W   FAG++G S I H EL+ALY  L + W+   +E       CY       
Sbjct: 231  LIRNSEGAWAHGFAGNIGFSNILHPELMALYRGLLLAWQLNIKE-----LWCYSDSEAAI 285

Query: 1128 XSLAPLCVNH*QYQRIARERDWRVQIVHTWREANAAADCFELLG 997
              +  +             R+WRV I HT+RE NA  D    LG
Sbjct: 286  KLIKDILA-----------REWRVNIAHTFREGNACVDYLAKLG 318



 Score = 33.1 bits (74), Expect(2) = 2e-09
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = -2

Query: 1369 VVLNVDGSSLGNPSLSGFNGFV 1304
            ++LNVDGSS+GNP +S + G +
Sbjct: 211  MILNVDGSSIGNPGVSRYGGLI 232


>dbj|GAU50646.1| hypothetical protein TSUD_333850 [Trifolium subterraneum]
          Length = 157

 Score = 55.1 bits (131), Expect(2) = 2e-09
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
 Frame = -3

Query: 1308 LLRHSDETWITSFAGSVGHSTIHHVELLALYFKLKVGWKKGFRESIC-KFYACYLXXXXX 1132
            L+R+SD  W+  F G++G S I H ELLA+   L + W+   +E  C       +     
Sbjct: 21   LIRNSDGAWVQDFIGNIGFSNILHAELLAVCHGLALAWELDIKELWCYPGSKIVIKLLSE 80

Query: 1131 XXSLAPLCVNH*QYQRIARERDWRVQIVHTWREANAAADCFELLG 997
              ++   C       +    +DWRV++VHT RE +  AD    LG
Sbjct: 81   HVNVWHHCAAIIYNIKDLLAKDWRVKVVHTLREGSTCADYLAKLG 125



 Score = 37.4 bits (85), Expect(2) = 2e-09
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -2

Query: 1369 VVLNVDGSSLGNPSLSGFNGFV 1304
            ++LNVDGSS+GNP +SGF G +
Sbjct: 1    MILNVDGSSIGNPGVSGFRGLI 22


>dbj|GAU35042.1| hypothetical protein TSUD_30080 [Trifolium subterraneum]
          Length = 724

 Score = 54.3 bits (129), Expect(2) = 4e-09
 Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
 Frame = -3

Query: 1308 LLRHSDETWITSFAGSVGHSTIHHVELLALYFKLKVGWKKGFRESICKFYACYLXXXXXX 1129
            L+R++D  WI  F G++G + I H EL+A+   L + W+   ++ +C   +         
Sbjct: 588  LIRNADGAWIHGFFGNLGVTNILHAELMAILKGLLLAWELNIKDLLCYSDSA----TAIK 643

Query: 1128 XSLAPLCVNH*QYQRIAR------ERDWRVQIVHTWREANAAAD 1015
                P+ V H  Y  I         RDW+V I HT+RE NA AD
Sbjct: 644  LITEPVDVWH-HYAAILNNIKDILNRDWQVSIFHTFREGNACAD 686



 Score = 37.0 bits (84), Expect(2) = 4e-09
 Identities = 13/23 (56%), Positives = 20/23 (86%)
 Frame = -2

Query: 1372 TVVLNVDGSSLGNPSLSGFNGFV 1304
            +++LNVDGS++GNP +SGF G +
Sbjct: 567  SMILNVDGSTIGNPGISGFGGLI 589


>dbj|GAU12548.1| hypothetical protein TSUD_182620 [Trifolium subterraneum]
          Length = 236

 Score = 39.7 bits (91), Expect(3) = 6e-09
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = -3

Query: 1308 LLRHSDETWITSFAGSVGHSTIHHVELLALYFKLKVGWKKGFRESIC 1168
            L+R++D  W+  F G++G + I H EL+ +Y  L + W+   ++  C
Sbjct: 157  LIRNADGAWVRGFFGNLGVTNILHAELMPIYKGLLLAWELNMKDMWC 203



 Score = 37.0 bits (84), Expect(3) = 6e-09
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -2

Query: 1369 VVLNVDGSSLGNPSLSGFNGFV 1304
            ++LNVDGSS+GNPS+S F G +
Sbjct: 137  MILNVDGSSIGNPSISSFRGLI 158



 Score = 33.5 bits (75), Expect(3) = 6e-09
 Identities = 12/28 (42%), Positives = 22/28 (78%)
 Frame = -1

Query: 1169 ANSMLAIYLVSNDLNHWHHYASIISNTK 1086
            ++S +AI L+++ ++ WHHYA I++N K
Sbjct: 205  SDSKMAIKLITDPIDAWHHYAVILNNIK 232


>gb|PNX95949.1| ribonuclease H [Trifolium pratense]
          Length = 157

 Score = 65.1 bits (157), Expect = 8e-09
 Identities = 43/112 (38%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
 Frame = -3

Query: 1308 LLRHSDETWITSFAGSVGHSTIHHVELLALYFKLKVGWKKGFRESICKFYACYLXXXXXX 1129
            L+R+ D  WI  + G +G S I H ELLAL F L++ W KG    IC  Y+  L      
Sbjct: 20   LIRNDDGGWIIGYHGHIGFSNILHAELLALLFGLQLAWDKGLSNIIC--YSDSL--NVVK 75

Query: 1128 XSLAPLCVNH*QYQRIARE------RDWRVQIVHTWREANAAADCFELLGKS 991
               AP+   H  Y  I +E      R+W VQ+ HT RE N +AD    +G S
Sbjct: 76   LVTAPITPMH-LYAAILQEVKNLMNRNWTVQLRHTLREGNQSADFLAKMGSS 126