BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00017336
         (1658 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004511295.1| PREDICTED: RNA pseudouridine synthase 4, mit...   654   0.0  
ref|XP_020237093.1| RNA pseudouridine synthase 4, mitochondrial ...   625   0.0  
ref|XP_013453291.1| RNA pseudouridine synthase [Medicago truncat...   625   0.0  
ref|XP_003516775.1| PREDICTED: RNA pseudouridine synthase 4, mit...   620   0.0  
gb|KYP45099.1| hypothetical protein KK1_033381 [Cajanus cajan]        619   0.0  
ref|XP_006573909.1| PREDICTED: RNA pseudouridine synthase 4, mit...   615   0.0  
dbj|BAU00859.1| hypothetical protein VIGAN_10249400 [Vigna angul...   610   0.0  
ref|XP_017406706.1| PREDICTED: RNA pseudouridine synthase 4, mit...   607   0.0  
ref|XP_014520097.1| RNA pseudouridine synthase 4, mitochondrial ...   604   0.0  
ref|XP_007157229.1| hypothetical protein PHAVU_002G053600g [Phas...   595   0.0  
ref|XP_015958450.1| RNA pseudouridine synthase 4, mitochondrial ...   566   0.0  
ref|XP_019441369.1| PREDICTED: RNA pseudouridine synthase 4, mit...   566   0.0  
ref|XP_016197034.1| RNA pseudouridine synthase 4, mitochondrial ...   561   0.0  
dbj|GAU29527.1| hypothetical protein TSUD_115490 [Trifolium subt...   547   0.0  
ref|XP_013453292.1| RNA pseudouridine synthase [Medicago truncat...   545   0.0  
dbj|GAV62308.1| PseudoU_synth_2 domain-containing protein [Cepha...   540   0.0  
ref|XP_014633041.1| PREDICTED: RNA pseudouridine synthase 4, mit...   536   0.0  
ref|XP_014633042.1| PREDICTED: RNA pseudouridine synthase 4, mit...   536   0.0  
ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Popu...   524   e-180
ref|XP_018827853.1| PREDICTED: RNA pseudouridine synthase 4, mit...   524   e-179

>ref|XP_004511295.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Cicer
            arietinum]
          Length = 458

 Score =  654 bits (1687), Expect = 0.0
 Identities = 326/420 (77%), Positives = 365/420 (86%), Gaps = 5/420 (1%)
 Frame = -1

Query: 1607 LRPLSRDCHLSADDGKWLKLPPVSATVKTSENQVSSSGSTSALKWVIRCCPHIPRTLVHK 1428
            +R  SR CH+SADD KWL LP VSATVK+S N+VSSS ST+ALKWV +CCP IP+TLVHK
Sbjct: 40   VRSWSRQCHMSADDAKWLTLPAVSATVKSSSNEVSSSSSTTALKWVTQCCPQIPKTLVHK 99

Query: 1427 LFRLRQVRMLPAAVQDHHRFKKVGAKDTLNSGDRIFLPDSVKET---PAAAKHECHVTAR 1257
            LFRLRQVRMLP +     + K+VGAKDTLNSGDRIFLP+SVK+        K    +T +
Sbjct: 100  LFRLRQVRMLPNSPLIADKLKRVGAKDTLNSGDRIFLPNSVKQQHQHQQTPKQPLTLTPK 159

Query: 1256 EINFIRGLVIYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLVHRLD 1077
            +I F+R LVIYKDPAT+VLNKPPGMPVQGGINIK SLD +A + L Y+YS+PPRLVHRLD
Sbjct: 160  QIKFMRSLVIYKDPATVVLNKPPGMPVQGGINIKWSLDALAASSLNYDYSQPPRLVHRLD 219

Query: 1076 RDCSGILVMGRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVIGSPRRSKGF 897
            RDCSGILVMGRTQTS  VLHSIFR+KTS+ASD    TEKRILQRRYWALVIG PRRS G 
Sbjct: 220  RDCSGILVMGRTQTSTVVLHSIFRDKTSRASDH-NDTEKRILQRRYWALVIGRPRRSGGL 278

Query: 896  ITAPLGKVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQ 717
            IT+PLGKVVVDNGKSDRITI+++STL+SSQHA+TEYRVLGSSS+GYTWLELSPLTGRKHQ
Sbjct: 279  ITSPLGKVVVDNGKSDRITIVNNSTLVSSQHAVTEYRVLGSSSDGYTWLELSPLTGRKHQ 338

Query: 716  LRVHCAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSIS 537
            LRVHCAEVLGTPIVGDYKYGWQAHKKWGHFDL NLEDS+EEL+KEETLPFGLNL KGSIS
Sbjct: 339  LRVHCAEVLGTPIVGDYKYGWQAHKKWGHFDLCNLEDSTEELLKEETLPFGLNLNKGSIS 398

Query: 536  EKQPRLHLHCKQIVLPNISQALKNVQSV--SNYDLSVVETLDLKVDLPPYMQRSWDVTNS 363
            +K PRLHLHCKQI+LPNISQAL++VQS+  SN DLSVVE L L+ +LPPYMQRSWDVTNS
Sbjct: 399  DKHPRLHLHCKQIILPNISQALQDVQSLSASNCDLSVVEALKLEAELPPYMQRSWDVTNS 458


>ref|XP_020237093.1| RNA pseudouridine synthase 4, mitochondrial [Cajanus cajan]
          Length = 428

 Score =  625 bits (1612), Expect = 0.0
 Identities = 315/419 (75%), Positives = 352/419 (84%), Gaps = 20/419 (4%)
 Frame = -1

Query: 1562 KWLKLPPVSATVKTS------------------ENQVSSSGSTSALKWVIRCCPHIPRTL 1437
            KWL LPPV++T                      ENQ+SS+  T+ALKWV+RCCP++PR L
Sbjct: 13   KWLTLPPVTSTATMEVKAKVKAKAMALALALGKENQISST-PTTALKWVVRCCPNLPRAL 71

Query: 1436 VHKLFRLRQVRMLPAAVQDHH-RFKKVGAKDTLNSGDRIFLPDSVKETPAAAKHECHVTA 1260
            VHKLFRLRQVR+L  +   HH  FK+V AKDTLN+GDRI LP SVK+TP   KH  H+T+
Sbjct: 72   VHKLFRLRQVRILSPSSHSHHPTFKRVAAKDTLNTGDRILLPQSVKQTPTH-KHHSHLTS 130

Query: 1259 REINFIRGLVIYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLVHRL 1080
            ++INFIR LVIYKDPA LVLNKPPGMPVQGGINIKRSLDVVA + L YEYSEPPRLVHRL
Sbjct: 131  QQINFIRTLVIYKDPAILVLNKPPGMPVQGGINIKRSLDVVAASSLNYEYSEPPRLVHRL 190

Query: 1079 DRDCSGILVMGRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVIGSPRRSKG 900
            DRDCSGILVMGRTQ SA +LHSIFREKTS+A +DIG  EKRILQR+YWALV+G PRR KG
Sbjct: 191  DRDCSGILVMGRTQASATLLHSIFREKTSRALNDIGK-EKRILQRKYWALVLGCPRRPKG 249

Query: 899  FITAPLGKVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKH 720
             +TA LGKVVVDNG+SDRITI+D+ST++SSQHAITEYRV+ SSS GYTWLELSPLTGRKH
Sbjct: 250  LVTASLGKVVVDNGRSDRITIVDNSTIMSSQHAITEYRVIASSSQGYTWLELSPLTGRKH 309

Query: 719  QLRVHCAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDS-SEELVKEETLPFGLNLTKGS 543
            QLRVHCAEVLGTPIVGDYKYGWQAH+KWGHFDLSN++DS  EEL+KEETLPFGLNL KGS
Sbjct: 310  QLRVHCAEVLGTPIVGDYKYGWQAHRKWGHFDLSNVDDSREEELLKEETLPFGLNLKKGS 369

Query: 542  ISEKQPRLHLHCKQIVLPNISQALKNVQSVSNYDLSVVETLDLKVDLPPYMQRSWDVTN 366
            ISE  PRLHLHCKQIVLPNISQAL+NVQS SN DLS+VE L+L  DLPPYMQRSWDVTN
Sbjct: 370  ISENHPRLHLHCKQIVLPNISQALQNVQSASNCDLSLVEGLELAADLPPYMQRSWDVTN 428


>ref|XP_013453291.1| RNA pseudouridine synthase [Medicago truncatula]
 gb|KEH27321.1| RNA pseudouridine synthase [Medicago truncatula]
          Length = 430

 Score =  625 bits (1611), Expect = 0.0
 Identities = 317/424 (74%), Positives = 356/424 (83%), Gaps = 8/424 (1%)
 Frame = -1

Query: 1610 WLRPLSRDCHLSADDGKWLKLPPVSATVKTSENQVSSSGSTSALKWVIRCCPHIPRTLVH 1431
            W R         A+DGKWL LPPVS TV TS    SSS ST ALKWVIRCCP +P+TL+H
Sbjct: 12   WSRRRQLSSSAVAEDGKWLTLPPVSTTVNTS----SSSTSTPALKWVIRCCPELPKTLIH 67

Query: 1430 KLFRLRQVRMLPAAVQDHHRFKKVGAKDTLNSGDRIFLPDSVKE----TPAAAKHECHVT 1263
            KLFRL+QVRMLP   QD ++FK+V  KDTLNSGDRIFLP+SVK+    TP   KHE  +T
Sbjct: 68   KLFRLKQVRMLPRQ-QDDNKFKRVTPKDTLNSGDRIFLPNSVKQQIPLTPTPPKHESPLT 126

Query: 1262 --AREINFIRGLVIYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLV 1089
              A++INFIR LVIYKDP  LVLNKPPGMPVQGGINIK SLD VA   L Y+YS+PPRLV
Sbjct: 127  LTAKQINFIRSLVIYKDPHILVLNKPPGMPVQGGINIKLSLDAVAAQSLNYDYSQPPRLV 186

Query: 1088 HRLDRDCSGILVMGRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVIGSPRR 909
            HRLDRDCSGILVMGRT+TS A+LHSIFREKTS+AS++   TEK ILQRRYWALV+G PRR
Sbjct: 187  HRLDRDCSGILVMGRTKTSTALLHSIFREKTSRASNEENDTEKIILQRRYWALVLGCPRR 246

Query: 908  SKGFITAPLGKVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTG 729
            S G + APLGKVVVDNGKSDRITI+D+S LLSSQHA+TEYRV+ SSS+G+TWLELSPLTG
Sbjct: 247  SGGVVNAPLGKVVVDNGKSDRITIVDNSALLSSQHAVTEYRVISSSSHGFTWLELSPLTG 306

Query: 728  RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTK 549
            RKHQLRVHCAEVLGTPIVGDYKYG QAHKKWG FD SNLEDS+EE +KEE LPFGLNL K
Sbjct: 307  RKHQLRVHCAEVLGTPIVGDYKYGRQAHKKWGQFDFSNLEDSTEEHLKEEALPFGLNLNK 366

Query: 548  GSISEKQPRLHLHCKQIVLPNISQALKNVQSV--SNYDLSVVETLDLKVDLPPYMQRSWD 375
            GSIS+K PRLHLHCKQIVLPNISQAL+NVQSV  S+YDLS VE+L+L+ DLPPYM++SW+
Sbjct: 367  GSISDKHPRLHLHCKQIVLPNISQALQNVQSVSDSSYDLSAVESLELEADLPPYMKKSWE 426

Query: 374  VTNS 363
            VTNS
Sbjct: 427  VTNS 430


>ref|XP_003516775.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
            [Glycine max]
 gb|KHN30421.1| RNA pseudourine synthase 4, mitochondrial [Glycine soja]
 gb|KRH77957.1| hypothetical protein GLYMA_01G244300 [Glycine max]
          Length = 427

 Score =  620 bits (1600), Expect = 0.0
 Identities = 312/405 (77%), Positives = 345/405 (85%), Gaps = 4/405 (0%)
 Frame = -1

Query: 1568 DGKWLKLPPVSATVKTSE--NQVSSSGSTSALKWVIRCCPHIPRTLVHKLFRLRQVRMLP 1395
            + KWL LPPVSA+   S   NQ+SS+  T+ALKWV+RCCPH+PR LVHKLFRLRQVR+ P
Sbjct: 28   EDKWLTLPPVSASSSASVELNQLSST-PTTALKWVVRCCPHLPRALVHKLFRLRQVRIHP 86

Query: 1394 AAVQDHHRFKKVGAKDTLNSGDRIFLPDSVK--ETPAAAKHECHVTAREINFIRGLVIYK 1221
            A V     FK+V AKDTLN+GDRI LP SVK  +TP  +    H+T ++INFIR LVIYK
Sbjct: 87   ATVIQQQTFKRVAAKDTLNTGDRILLPQSVKVKQTPTHS----HLTPQQINFIRTLVIYK 142

Query: 1220 DPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLVHRLDRDCSGILVMGRT 1041
            DPA LVLNKPPGMPVQGGINIKRSLD VA A L Y YS+PPRLVHRLDRDCSGILVMGRT
Sbjct: 143  DPAILVLNKPPGMPVQGGINIKRSLDAVAAASLNYGYSQPPRLVHRLDRDCSGILVMGRT 202

Query: 1040 QTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVIGSPRRSKGFITAPLGKVVVDN 861
             TS  VLHSIFREKTS+ASDDIG  EKRILQRRYWALV+G PRR KG +TA LGKVVVDN
Sbjct: 203  HTSTTVLHSIFREKTSRASDDIGK-EKRILQRRYWALVLGCPRRPKGLVTASLGKVVVDN 261

Query: 860  GKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVHCAEVLGTP 681
            G+SDRITI+D+STL+SSQHAITEYRV+ SSS GYTWLEL+PLTGRKHQLRVHCAEVLGTP
Sbjct: 262  GRSDRITIVDNSTLMSSQHAITEYRVIASSSQGYTWLELTPLTGRKHQLRVHCAEVLGTP 321

Query: 680  IVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSISEKQPRLHLHCKQ 501
            IVGDYKYGWQAH+KWGHFDL N+EDS EEL+ EE LPFGLNL KGSISE  PRLHLHCKQ
Sbjct: 322  IVGDYKYGWQAHRKWGHFDLPNVEDSREELLNEEKLPFGLNLNKGSISENHPRLHLHCKQ 381

Query: 500  IVLPNISQALKNVQSVSNYDLSVVETLDLKVDLPPYMQRSWDVTN 366
            +VLPNISQAL+NVQS S+ DLS+VE L+L  DLPPYMQRSWDVTN
Sbjct: 382  MVLPNISQALQNVQSASSCDLSLVEELELVADLPPYMQRSWDVTN 426


>gb|KYP45099.1| hypothetical protein KK1_033381 [Cajanus cajan]
          Length = 403

 Score =  619 bits (1595), Expect = 0.0
 Identities = 307/386 (79%), Positives = 342/386 (88%), Gaps = 2/386 (0%)
 Frame = -1

Query: 1517 ENQVSSSGSTSALKWVIRCCPHIPRTLVHKLFRLRQVRMLPAAVQDHH-RFKKVGAKDTL 1341
            ENQ+SS+  T+ALKWV+RCCP++PR LVHKLFRLRQVR+L  +   HH  FK+V AKDTL
Sbjct: 21   ENQISST-PTTALKWVVRCCPNLPRALVHKLFRLRQVRILSPSSHSHHPTFKRVAAKDTL 79

Query: 1340 NSGDRIFLPDSVKETPAAAKHECHVTAREINFIRGLVIYKDPATLVLNKPPGMPVQGGIN 1161
            N+GDRI LP SVK+TP   KH  H+T+++INFIR LVIYKDPA LVLNKPPGMPVQGGIN
Sbjct: 80   NTGDRILLPQSVKQTPTH-KHHSHLTSQQINFIRTLVIYKDPAILVLNKPPGMPVQGGIN 138

Query: 1160 IKRSLDVVAGACLKYEYSEPPRLVHRLDRDCSGILVMGRTQTSAAVLHSIFREKTSKASD 981
            IKRSLDVVA + L YEYSEPPRLVHRLDRDCSGILVMGRTQ SA +LHSIFREKTS+A +
Sbjct: 139  IKRSLDVVAASSLNYEYSEPPRLVHRLDRDCSGILVMGRTQASATLLHSIFREKTSRALN 198

Query: 980  DIGSTEKRILQRRYWALVIGSPRRSKGFITAPLGKVVVDNGKSDRITILDHSTLLSSQHA 801
            DIG  EKRILQR+YWALV+G PRR KG +TA LGKVVVDNG+SDRITI+D+ST++SSQHA
Sbjct: 199  DIGK-EKRILQRKYWALVLGCPRRPKGLVTASLGKVVVDNGRSDRITIVDNSTIMSSQHA 257

Query: 800  ITEYRVLGSSSNGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKWGHFDL 621
            ITEYRV+ SSS GYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAH+KWGHFDL
Sbjct: 258  ITEYRVIASSSQGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWGHFDL 317

Query: 620  SNLEDS-SEELVKEETLPFGLNLTKGSISEKQPRLHLHCKQIVLPNISQALKNVQSVSNY 444
            SN++DS  EEL+KEETLPFGLNL KGSISE  PRLHLHCKQIVLPNISQAL+NVQS SN 
Sbjct: 318  SNVDDSREEELLKEETLPFGLNLKKGSISENHPRLHLHCKQIVLPNISQALQNVQSASNC 377

Query: 443  DLSVVETLDLKVDLPPYMQRSWDVTN 366
            DLS+VE L+L  DLPPYMQRSWDVTN
Sbjct: 378  DLSLVEGLELAADLPPYMQRSWDVTN 403


>ref|XP_006573909.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
            [Glycine max]
 gb|KRH77956.1| hypothetical protein GLYMA_01G244300 [Glycine max]
          Length = 429

 Score =  615 bits (1587), Expect = 0.0
 Identities = 312/407 (76%), Positives = 345/407 (84%), Gaps = 6/407 (1%)
 Frame = -1

Query: 1568 DGKWLKLPPVSATVKTSE--NQVSSSGSTSALKWVIRCCPHIPRTLVHKLFRLRQVRMLP 1395
            + KWL LPPVSA+   S   NQ+SS+  T+ALKWV+RCCPH+PR LVHKLFRLRQVR+ P
Sbjct: 28   EDKWLTLPPVSASSSASVELNQLSST-PTTALKWVVRCCPHLPRALVHKLFRLRQVRIHP 86

Query: 1394 AAVQDHHRFKKV--GAKDTLNSGDRIFLPDSVK--ETPAAAKHECHVTAREINFIRGLVI 1227
            A V     FK+V   AKDTLN+GDRI LP SVK  +TP  +    H+T ++INFIR LVI
Sbjct: 87   ATVIQQQTFKRVRVAAKDTLNTGDRILLPQSVKVKQTPTHS----HLTPQQINFIRTLVI 142

Query: 1226 YKDPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLVHRLDRDCSGILVMG 1047
            YKDPA LVLNKPPGMPVQGGINIKRSLD VA A L Y YS+PPRLVHRLDRDCSGILVMG
Sbjct: 143  YKDPAILVLNKPPGMPVQGGINIKRSLDAVAAASLNYGYSQPPRLVHRLDRDCSGILVMG 202

Query: 1046 RTQTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVIGSPRRSKGFITAPLGKVVV 867
            RT TS  VLHSIFREKTS+ASDDIG  EKRILQRRYWALV+G PRR KG +TA LGKVVV
Sbjct: 203  RTHTSTTVLHSIFREKTSRASDDIGK-EKRILQRRYWALVLGCPRRPKGLVTASLGKVVV 261

Query: 866  DNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVHCAEVLG 687
            DNG+SDRITI+D+STL+SSQHAITEYRV+ SSS GYTWLEL+PLTGRKHQLRVHCAEVLG
Sbjct: 262  DNGRSDRITIVDNSTLMSSQHAITEYRVIASSSQGYTWLELTPLTGRKHQLRVHCAEVLG 321

Query: 686  TPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSISEKQPRLHLHC 507
            TPIVGDYKYGWQAH+KWGHFDL N+EDS EEL+ EE LPFGLNL KGSISE  PRLHLHC
Sbjct: 322  TPIVGDYKYGWQAHRKWGHFDLPNVEDSREELLNEEKLPFGLNLNKGSISENHPRLHLHC 381

Query: 506  KQIVLPNISQALKNVQSVSNYDLSVVETLDLKVDLPPYMQRSWDVTN 366
            KQ+VLPNISQAL+NVQS S+ DLS+VE L+L  DLPPYMQRSWDVTN
Sbjct: 382  KQMVLPNISQALQNVQSASSCDLSLVEELELVADLPPYMQRSWDVTN 428


>dbj|BAU00859.1| hypothetical protein VIGAN_10249400 [Vigna angularis var. angularis]
          Length = 440

 Score =  610 bits (1572), Expect = 0.0
 Identities = 318/434 (73%), Positives = 354/434 (81%), Gaps = 15/434 (3%)
 Frame = -1

Query: 1622 WRWRWLRPLSRDCHLSAD---DGKWLKLPPVSATV--------KTSENQVSSSGSTSALK 1476
            W +R LR   R  +LSA    + KWL LPPV+A+         K   NQ+SS+ ST+ALK
Sbjct: 11   WMFRALRSGRR--YLSAGRQREEKWLTLPPVAASATVEVNGKRKGKGNQLSST-STTALK 67

Query: 1475 WVIRCCPHIPRTLVHKLFRLRQVRML--PAAVQDHHRFKKVGAKDTLNSGDRIFLPDSVK 1302
            W++RCCP++P +L+HKLFRLRQVR+L  P         K+V AK TLN+GDRI LP SV+
Sbjct: 68   WIVRCCPNLPISLLHKLFRLRQVRLLSPPHMDMQQQTLKRVAAKYTLNAGDRILLPQSVQ 127

Query: 1301 ETPAAAKHECH--VTAREINFIRGLVIYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGA 1128
            + P    H+ H  +T ++INFIR LVIYKDPA LVLNKPPGMPVQGGINIK SLDVVA A
Sbjct: 128  QKPTPT-HKPHSPLTPQQINFIRTLVIYKDPAILVLNKPPGMPVQGGINIKHSLDVVAAA 186

Query: 1127 CLKYEYSEPPRLVHRLDRDCSGILVMGRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQ 948
            CL YEYSEPPRLVHRLDRDCSGILVMGRTQTS  VLHSIFREKTS+A DDIG  EKRILQ
Sbjct: 187  CLNYEYSEPPRLVHRLDRDCSGILVMGRTQTSTTVLHSIFREKTSRALDDIGE-EKRILQ 245

Query: 947  RRYWALVIGSPRRSKGFITAPLGKVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSS 768
            RRYWALV+G PRRSKG +TA LGKVVVDNGKS+RIT++D+S  LSSQHAITEYRV+ SSS
Sbjct: 246  RRYWALVLGCPRRSKGLVTASLGKVVVDNGKSERITVVDNSASLSSQHAITEYRVIASSS 305

Query: 767  NGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELV 588
             GYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAH+KWG FDLSN+EDS EEL+
Sbjct: 306  QGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWGGFDLSNVEDSCEELL 365

Query: 587  KEETLPFGLNLTKGSISEKQPRLHLHCKQIVLPNISQALKNVQSVSNYDLSVVETLDLKV 408
            KEETLPFGLNL  GSISE  PRLHLHCKQIVLPNISQAL+NVQS SN DLS VE L+L  
Sbjct: 366  KEETLPFGLNLNNGSISENHPRLHLHCKQIVLPNISQALQNVQSFSNCDLSQVEGLELVA 425

Query: 407  DLPPYMQRSWDVTN 366
            DLPPYMQRSWDVTN
Sbjct: 426  DLPPYMQRSWDVTN 439


>ref|XP_017406706.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Vigna
            angularis]
 gb|KOM26639.1| hypothetical protein LR48_Vigan303s006100 [Vigna angularis]
          Length = 440

 Score =  607 bits (1566), Expect = 0.0
 Identities = 317/434 (73%), Positives = 353/434 (81%), Gaps = 15/434 (3%)
 Frame = -1

Query: 1622 WRWRWLRPLSRDCHLSAD---DGKWLKLPPVSATV--------KTSENQVSSSGSTSALK 1476
            W +R LR   R  +LSA    + KWL LPPV+A+         K   NQ+SS+ ST+ALK
Sbjct: 11   WMFRALRSGRR--YLSAGRQREEKWLTLPPVAASATVEVNGKRKGKGNQLSST-STTALK 67

Query: 1475 WVIRCCPHIPRTLVHKLFRLRQVRML--PAAVQDHHRFKKVGAKDTLNSGDRIFLPDSVK 1302
            W++RCCP++P +L+HKLFRLRQVR+L  P         K+V AK TLN+GDRI LP SV+
Sbjct: 68   WIVRCCPNLPISLLHKLFRLRQVRLLSPPHMDMQQQTLKRVAAKYTLNAGDRILLPQSVQ 127

Query: 1301 ETPAAAKHECH--VTAREINFIRGLVIYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGA 1128
            + P    H+ H  +T ++INFIR LVIYKDPA LVLNKPPG PVQGGINIK SLDVVA A
Sbjct: 128  QKPTPT-HKPHSPLTPQQINFIRTLVIYKDPAILVLNKPPGSPVQGGINIKHSLDVVAAA 186

Query: 1127 CLKYEYSEPPRLVHRLDRDCSGILVMGRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQ 948
            CL YEYSEPPRLVHRLDRDCSGILVMGRTQTS  VLHSIFREKTS+A DDIG  EKRILQ
Sbjct: 187  CLNYEYSEPPRLVHRLDRDCSGILVMGRTQTSTTVLHSIFREKTSRALDDIGE-EKRILQ 245

Query: 947  RRYWALVIGSPRRSKGFITAPLGKVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSS 768
            RRYWALV+G PRRSKG +TA LGKVVVDNGKS+RIT++D+S  LSSQHAITEYRV+ SSS
Sbjct: 246  RRYWALVLGCPRRSKGLVTASLGKVVVDNGKSERITVVDNSASLSSQHAITEYRVIASSS 305

Query: 767  NGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELV 588
             GYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAH+KWG FDLSN+EDS EEL+
Sbjct: 306  QGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWGGFDLSNVEDSCEELL 365

Query: 587  KEETLPFGLNLTKGSISEKQPRLHLHCKQIVLPNISQALKNVQSVSNYDLSVVETLDLKV 408
            KEETLPFGLNL  GSISE  PRLHLHCKQIVLPNISQAL+NVQS SN DLS VE L+L  
Sbjct: 366  KEETLPFGLNLNNGSISENHPRLHLHCKQIVLPNISQALQNVQSFSNCDLSQVEGLELVA 425

Query: 407  DLPPYMQRSWDVTN 366
            DLPPYMQRSWDVTN
Sbjct: 426  DLPPYMQRSWDVTN 439


>ref|XP_014520097.1| RNA pseudouridine synthase 4, mitochondrial isoform X1 [Vigna radiata
            var. radiata]
          Length = 440

 Score =  604 bits (1557), Expect = 0.0
 Identities = 315/434 (72%), Positives = 350/434 (80%), Gaps = 15/434 (3%)
 Frame = -1

Query: 1622 WRWRWLRPLSRDCHLSAD---DGKWLKLPPVSATV--------KTSENQVSSSGSTSALK 1476
            W +R LR   R  HLSA    + KWL LPPV+AT         K   NQ+SS+ ST+ALK
Sbjct: 11   WMFRALRSGRR--HLSAGRQLEEKWLTLPPVAATATVEVNGKRKGKGNQLSST-STTALK 67

Query: 1475 WVIRCCPHIPRTLVHKLFRLRQVRML--PAAVQDHHRFKKVGAKDTLNSGDRIFLPDSVK 1302
            W++RCCP++P +L+HKLFRLRQVR+L  P         K+V AK TLN+GDRI LP SV+
Sbjct: 68   WIVRCCPNLPISLLHKLFRLRQVRLLSPPHMDMQQQTLKRVAAKYTLNAGDRILLPQSVQ 127

Query: 1301 ETPAAAKHECH--VTAREINFIRGLVIYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGA 1128
            + P    H+ H  +T ++INFIR  VI+KDPA LVLNKPPGMPVQGGINIK SLD VA A
Sbjct: 128  QKPTPT-HKPHSPLTPQQINFIRKFVIFKDPAILVLNKPPGMPVQGGINIKHSLDAVAAA 186

Query: 1127 CLKYEYSEPPRLVHRLDRDCSGILVMGRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQ 948
            CL YEYSEPPRLVHRLDRDCSG+LVMGRTQTS  VLHSIFREKTS+A DDIG  EKRILQ
Sbjct: 187  CLNYEYSEPPRLVHRLDRDCSGLLVMGRTQTSTTVLHSIFREKTSRALDDIGE-EKRILQ 245

Query: 947  RRYWALVIGSPRRSKGFITAPLGKVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSS 768
            RRYWALV+G PRRSKG +TA LGKVVVDNGKSDRIT++D+S  LSSQHAITEYRV+ SSS
Sbjct: 246  RRYWALVLGCPRRSKGLVTASLGKVVVDNGKSDRITVVDNSASLSSQHAITEYRVIASSS 305

Query: 767  NGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELV 588
             GYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAH++WG FDLSN+EDS EEL 
Sbjct: 306  QGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRQWGGFDLSNVEDSCEELF 365

Query: 587  KEETLPFGLNLTKGSISEKQPRLHLHCKQIVLPNISQALKNVQSVSNYDLSVVETLDLKV 408
            KEETLPFGLNL  GSISE  PRLHLHCKQIVLPNISQAL+NVQS SN DLS VE L+L  
Sbjct: 366  KEETLPFGLNLNNGSISENHPRLHLHCKQIVLPNISQALQNVQSFSNCDLSQVERLELVA 425

Query: 407  DLPPYMQRSWDVTN 366
            DLP YMQRSWDVTN
Sbjct: 426  DLPLYMQRSWDVTN 439


>ref|XP_007157229.1| hypothetical protein PHAVU_002G053600g [Phaseolus vulgaris]
 gb|ESW29223.1| hypothetical protein PHAVU_002G053600g [Phaseolus vulgaris]
          Length = 432

 Score =  595 bits (1534), Expect = 0.0
 Identities = 307/429 (71%), Positives = 346/429 (80%), Gaps = 10/429 (2%)
 Frame = -1

Query: 1622 WRWRWLRPLSRDCHLSAD-DGKWLKLPPVSAT--------VKTSENQVSSSGSTSALKWV 1470
            W +R LR   R   ++   + KWL LPPV+A+         K   N+VSS+  T+ALKW+
Sbjct: 7    WMFRALRSGRRQMSMARKWEEKWLTLPPVAASGSVEVKGKTKGKGNEVSST-PTTALKWI 65

Query: 1469 IRCCPHIPRTLVHKLFRLRQVRMLPAAVQDHHRFKKVGAKDTLNSGDRIFLPDSVKETPA 1290
            +RCCP  P +L+HKLFRLRQVR+L     +    K+V AKDTLNSGDRI LP SV++ P 
Sbjct: 66   VRCCPSAPISLLHKLFRLRQVRVLSPPHTE--TLKRVAAKDTLNSGDRILLPQSVQQKPT 123

Query: 1289 AA-KHECHVTAREINFIRGLVIYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYE 1113
               K    +T ++INFIR LVI+KDPA LVLNKPPGMPVQGGINIK SLDVVA ACL YE
Sbjct: 124  PTRKPHSSLTPQQINFIRTLVIHKDPAILVLNKPPGMPVQGGINIKHSLDVVAAACLNYE 183

Query: 1112 YSEPPRLVHRLDRDCSGILVMGRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWA 933
            YSEPPRLVHRLDRDCSGILVMGRTQTS  VLHSIFREKTS+A DD    EKRILQRRYWA
Sbjct: 184  YSEPPRLVHRLDRDCSGILVMGRTQTSTTVLHSIFREKTSRALDDT-EEEKRILQRRYWA 242

Query: 932  LVIGSPRRSKGFITAPLGKVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTW 753
            LV+G PR SKG +TA LGKVVVDNGKSDRIT++D+ST LSSQHAITEYRV+ SSS GYTW
Sbjct: 243  LVLGRPRCSKGLVTASLGKVVVDNGKSDRITVVDNSTSLSSQHAITEYRVIASSSQGYTW 302

Query: 752  LELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETL 573
            LELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAH+KWG+FDLSN+EDS EE +KEETL
Sbjct: 303  LELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWGNFDLSNVEDSCEEHLKEETL 362

Query: 572  PFGLNLTKGSISEKQPRLHLHCKQIVLPNISQALKNVQSVSNYDLSVVETLDLKVDLPPY 393
            PFGLNL  GSISE +PRLHLHCK+IVLPNIS+AL+NVQS SN DLS VE L L  DLPPY
Sbjct: 363  PFGLNLNNGSISENRPRLHLHCKKIVLPNISEALQNVQSFSNCDLSQVEGLQLVADLPPY 422

Query: 392  MQRSWDVTN 366
            MQRSWD+T+
Sbjct: 423  MQRSWDITS 431


>ref|XP_015958450.1| RNA pseudouridine synthase 4, mitochondrial [Arachis duranensis]
          Length = 421

 Score =  566 bits (1459), Expect = 0.0
 Identities = 291/411 (70%), Positives = 332/411 (80%)
 Frame = -1

Query: 1595 SRDCHLSADDGKWLKLPPVSATVKTSENQVSSSGSTSALKWVIRCCPHIPRTLVHKLFRL 1416
            +R   ++ ++ KW  LPP S T   +    S+S ST+ALKWV+RCCPH+P+ LVHKLFRL
Sbjct: 20   TRHFSITNNNNKWHTLPPFSPT--PTSLSPSASASTTALKWVLRCCPHLPKPLVHKLFRL 77

Query: 1415 RQVRMLPAAVQDHHRFKKVGAKDTLNSGDRIFLPDSVKETPAAAKHECHVTAREINFIRG 1236
            RQVR   +        K+V AKDTLNSGD IFLP SVK  P   K    +T  +I F+R 
Sbjct: 78   RQVRRSSSPTI----IKRVAAKDTLNSGDTIFLPLSVKHIPTEVKRHSDLTPHQIQFVRS 133

Query: 1235 LVIYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLVHRLDRDCSGIL 1056
            LV+YKDPA LVLNKPPGMPVQGGINIKRSLDV+A ACL +EY + PRLVHRLDRDCSGIL
Sbjct: 134  LVLYKDPAVLVLNKPPGMPVQGGINIKRSLDVLAAACLNFEYPDSPRLVHRLDRDCSGIL 193

Query: 1055 VMGRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVIGSPRRSKGFITAPLGK 876
            VMGRTQTSA +LHSIFREKTS ASDDI + E RILQRRY ALVIG PRR +G ITA LGK
Sbjct: 194  VMGRTQTSATILHSIFREKTSTASDDIDA-ENRILQRRYIALVIGCPRRPRGLITASLGK 252

Query: 875  VVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVHCAE 696
            VVVDNGKSDRIT++D+STLLSSQHAITEY V+GSSS+GYTWLEL PLTGRKHQLRVHCAE
Sbjct: 253  VVVDNGKSDRITVVDNSTLLSSQHAITEYHVIGSSSHGYTWLELYPLTGRKHQLRVHCAE 312

Query: 695  VLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSISEKQPRLH 516
            VLGTPIVGDYKYGWQAH+K+GH +LS++ DSSEEL KEE LPFGL + KGSISE+ PRLH
Sbjct: 313  VLGTPIVGDYKYGWQAHRKFGHDNLSDV-DSSEELCKEEMLPFGLTMNKGSISERCPRLH 371

Query: 515  LHCKQIVLPNISQALKNVQSVSNYDLSVVETLDLKVDLPPYMQRSWDVTNS 363
            LHCKQIVLPNI +AL++VQS  +YDL+ V  L L   LPPYMQRSWD+TNS
Sbjct: 372  LHCKQIVLPNIYRALQDVQS-PHYDLNQVGNLALTAPLPPYMQRSWDITNS 421


>ref|XP_019441369.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like [Lupinus
            angustifolius]
 ref|XP_019444510.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like [Lupinus
            angustifolius]
          Length = 412

 Score =  566 bits (1458), Expect = 0.0
 Identities = 293/414 (70%), Positives = 336/414 (81%), Gaps = 14/414 (3%)
 Frame = -1

Query: 1562 KWLKLPPVSATVKTSEN--QVSSSGSTSALKWVIRCCPHIPRTLVHKLFRLRQVRMLPAA 1389
            KWL LPP   T+   +N  Q+SS  + +ALKWV RCCP IP+TLVHKLFRLRQVR  P  
Sbjct: 5    KWLTLPPFIPTLVNVKNGNQISSPSTITALKWVTRCCPQIPKTLVHKLFRLRQVRTQPP- 63

Query: 1388 VQDHHRFKKVGAKDTLNSGDRIFLPDSVKETPAAA---KHECH----VTAREINFIRGLV 1230
              +H  FK++  KDTLNSGD IFLP SVK+TP      KH  H    +T ++INFIR L+
Sbjct: 64   --NHTSFKRLSPKDTLNSGDLIFLPQSVKQTPPPTHKHKHLSHSHPPLTDKQINFIRTLL 121

Query: 1229 IYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLVHRLDRDCSGILVM 1050
            IYKDPA LVLNKPPG+PVQGGINIK SLDV+A A L Y+YSEPPRLVHRLDRDCSGILVM
Sbjct: 122  IYKDPALLVLNKPPGLPVQGGINIKHSLDVLAAASLNYDYSEPPRLVHRLDRDCSGILVM 181

Query: 1049 GRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVIGSPRRSKGFITAPLGKVV 870
             RT TSA +LHSIFR+KTS AS +I +T+K ILQRRYWA+VIG PRR KG +TA LGKVV
Sbjct: 182  ARTHTSATILHSIFRDKTSTASHNI-ATDKTILQRRYWAMVIGCPRRPKGLVTASLGKVV 240

Query: 869  VDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVHCAEVL 690
            VDNGKSDRIT++D ST +SSQHA+TEY+V+GSSSNGYTWLELSPLTGRKHQLRVHCAEVL
Sbjct: 241  VDNGKSDRITVVDKSTSVSSQHAVTEYKVIGSSSNGYTWLELSPLTGRKHQLRVHCAEVL 300

Query: 689  GTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEET---LPFGLNLTKGSISEKQPRL 519
            GTPIVGDYKYGWQAHKKWG F+  + EDSSEEL+KEET   LPFGLN+ KGSI EK+PRL
Sbjct: 301  GTPIVGDYKYGWQAHKKWGLFE--DEEDSSEELLKEETETLLPFGLNMKKGSICEKRPRL 358

Query: 518  HLHCKQIVLPNISQALKNVQSVS--NYDLSVVETLDLKVDLPPYMQRSWDVTNS 363
            HLHCKQIVLPNI ++L+NV+S S  + DL  VE+L+L   LPPYMQRSW+ TNS
Sbjct: 359  HLHCKQIVLPNICESLQNVESGSSRSCDLLGVESLELVAALPPYMQRSWEFTNS 412


>ref|XP_016197034.1| RNA pseudouridine synthase 4, mitochondrial [Arachis ipaensis]
          Length = 423

 Score =  561 bits (1446), Expect = 0.0
 Identities = 290/406 (71%), Positives = 328/406 (80%)
 Frame = -1

Query: 1580 LSADDGKWLKLPPVSATVKTSENQVSSSGSTSALKWVIRCCPHIPRTLVHKLFRLRQVRM 1401
            L  ++ KW  LPP S T       +S+S ST+ALKWV+RCCPH+P+ LVHKLFRLRQVR 
Sbjct: 29   LPDNNNKWHTLPPFSPT----PTSLSASASTTALKWVLRCCPHLPKPLVHKLFRLRQVRR 84

Query: 1400 LPAAVQDHHRFKKVGAKDTLNSGDRIFLPDSVKETPAAAKHECHVTAREINFIRGLVIYK 1221
              +        K+V AKDTLNSGD IFLP SVK  P   K    +T ++I F+R LV+YK
Sbjct: 85   SSSPTI----IKRVAAKDTLNSGDTIFLPLSVKHIPTEKKRHSDLTPQQIQFVRSLVLYK 140

Query: 1220 DPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLVHRLDRDCSGILVMGRT 1041
            DPA LVLNKPPGMPVQGG NIKRSLDV+A ACL +EY + PRLVHRLDRDCSGILVMGRT
Sbjct: 141  DPAVLVLNKPPGMPVQGGTNIKRSLDVLAAACLNFEYPDSPRLVHRLDRDCSGILVMGRT 200

Query: 1040 QTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVIGSPRRSKGFITAPLGKVVVDN 861
            QTSA +LHSIFREKTS ASDDI + E RILQRRY ALVIG PRR +G ITA LGKVVVDN
Sbjct: 201  QTSATILHSIFREKTSTASDDIDA-ENRILQRRYIALVIGCPRRPRGLITASLGKVVVDN 259

Query: 860  GKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVHCAEVLGTP 681
            GKSDRITI+D+STLLSSQHAITEY V+GSSS+GYTWLEL PLTGRKHQLRVHCAEVLGTP
Sbjct: 260  GKSDRITIVDNSTLLSSQHAITEYHVIGSSSHGYTWLELYPLTGRKHQLRVHCAEVLGTP 319

Query: 680  IVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSISEKQPRLHLHCKQ 501
            IVGDYKYGWQAH+K+G  +LS++ DSSEEL KEE LPFGL + KGSISE+ PRLHLHCKQ
Sbjct: 320  IVGDYKYGWQAHRKFGPDNLSDV-DSSEELCKEEMLPFGLTMNKGSISERCPRLHLHCKQ 378

Query: 500  IVLPNISQALKNVQSVSNYDLSVVETLDLKVDLPPYMQRSWDVTNS 363
            IVLPNI +AL++VQS  +YDL+ V  L L   LPPYMQRSWD+TNS
Sbjct: 379  IVLPNIYRALQDVQS-PHYDLNQVGNLALTAPLPPYMQRSWDITNS 423


>dbj|GAU29527.1| hypothetical protein TSUD_115490 [Trifolium subterraneum]
          Length = 354

 Score =  547 bits (1410), Expect = 0.0
 Identities = 276/355 (77%), Positives = 309/355 (87%), Gaps = 3/355 (0%)
 Frame = -1

Query: 1418 LRQVRMLPAAVQDHHRFKKVGAKDTLNSGDRIFLPDSVKE-TPAAAKHECHVTAREINFI 1242
            L  + + P+  QDH +FK+V  KD+LNSGDRIFLP SVK+ TP        +TA++INFI
Sbjct: 2    LPSLSLSPSQQQDH-KFKRVTPKDSLNSGDRIFLPHSVKQITPPKHDSPLTLTAKQINFI 60

Query: 1241 RGLVIYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLVHRLDRDCSG 1062
            R LVIYKDP  LVLNKPPGMPVQGGINIKRSLD VA  CL Y+YSEPPRLVHRLDRDCSG
Sbjct: 61   RTLVIYKDPHILVLNKPPGMPVQGGINIKRSLDAVAAECLNYDYSEPPRLVHRLDRDCSG 120

Query: 1061 ILVMGRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVIGSPRRSKGFITAPL 882
            ILVMGRT+TS  +LHSIFR+KTS ASDDIG T++RILQRRYWALV+G PRRS G +TAPL
Sbjct: 121  ILVMGRTKTSTTLLHSIFRDKTSTASDDIG-TKRRILQRRYWALVLGCPRRSGGLVTAPL 179

Query: 881  GKVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVHC 702
            GKVVVDNGKSDRITI+D+ T LSSQHAITEYRV+GSSS+GYTWLELSPLTGRKHQLRVHC
Sbjct: 180  GKVVVDNGKSDRITIVDNPTSLSSQHAITEYRVIGSSSHGYTWLELSPLTGRKHQLRVHC 239

Query: 701  AEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSISEKQPR 522
            AEVLGTPIVGDYKYG QAHKKWG FDLSNLED++EEL+KEE LPFGLNL KG IS+K PR
Sbjct: 240  AEVLGTPIVGDYKYGRQAHKKWGQFDLSNLEDTTEELLKEEALPFGLNLNKGCISDKHPR 299

Query: 521  LHLHCKQIVLPNISQALKNVQSVSN--YDLSVVETLDLKVDLPPYMQRSWDVTNS 363
            LHLHCKQIVLPNISQAL+NVQS+S+  YDLS VE L+L+ DLPPYM++SWDVTNS
Sbjct: 300  LHLHCKQIVLPNISQALQNVQSLSDSTYDLSEVEALELEADLPPYMKKSWDVTNS 354


>ref|XP_013453292.1| RNA pseudouridine synthase [Medicago truncatula]
 gb|KEH27320.1| RNA pseudouridine synthase [Medicago truncatula]
          Length = 390

 Score =  545 bits (1403), Expect = 0.0
 Identities = 277/364 (76%), Positives = 311/364 (85%), Gaps = 8/364 (2%)
 Frame = -1

Query: 1430 KLFRLRQVRMLPAAVQDHHRFKKVGAKDTLNSGDRIFLPDSVKE----TPAAAKHECHVT 1263
            K   L  VRMLP   QD ++FK+V  KDTLNSGDRIFLP+SVK+    TP   KHE  +T
Sbjct: 28   KWLTLPPVRMLPRQ-QDDNKFKRVTPKDTLNSGDRIFLPNSVKQQIPLTPTPPKHESPLT 86

Query: 1262 --AREINFIRGLVIYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLV 1089
              A++INFIR LVIYKDP  LVLNKPPGMPVQGGINIK SLD VA   L Y+YS+PPRLV
Sbjct: 87   LTAKQINFIRSLVIYKDPHILVLNKPPGMPVQGGINIKLSLDAVAAQSLNYDYSQPPRLV 146

Query: 1088 HRLDRDCSGILVMGRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVIGSPRR 909
            HRLDRDCSGILVMGRT+TS A+LHSIFREKTS+AS++   TEK ILQRRYWALV+G PRR
Sbjct: 147  HRLDRDCSGILVMGRTKTSTALLHSIFREKTSRASNEENDTEKIILQRRYWALVLGCPRR 206

Query: 908  SKGFITAPLGKVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTG 729
            S G + APLGKVVVDNGKSDRITI+D+S LLSSQHA+TEYRV+ SSS+G+TWLELSPLTG
Sbjct: 207  SGGVVNAPLGKVVVDNGKSDRITIVDNSALLSSQHAVTEYRVISSSSHGFTWLELSPLTG 266

Query: 728  RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTK 549
            RKHQLRVHCAEVLGTPIVGDYKYG QAHKKWG FD SNLEDS+EE +KEE LPFGLNL K
Sbjct: 267  RKHQLRVHCAEVLGTPIVGDYKYGRQAHKKWGQFDFSNLEDSTEEHLKEEALPFGLNLNK 326

Query: 548  GSISEKQPRLHLHCKQIVLPNISQALKNVQSV--SNYDLSVVETLDLKVDLPPYMQRSWD 375
            GSIS+K PRLHLHCKQIVLPNISQAL+NVQSV  S+YDLS VE+L+L+ DLPPYM++SW+
Sbjct: 327  GSISDKHPRLHLHCKQIVLPNISQALQNVQSVSDSSYDLSAVESLELEADLPPYMKKSWE 386

Query: 374  VTNS 363
            VTNS
Sbjct: 387  VTNS 390


>dbj|GAV62308.1| PseudoU_synth_2 domain-containing protein [Cephalotus follicularis]
          Length = 467

 Score =  540 bits (1391), Expect = 0.0
 Identities = 263/422 (62%), Positives = 325/422 (77%), Gaps = 21/422 (4%)
 Frame = -1

Query: 1565 GKWLKLPPVSATVKTS-------------ENQVSSSGSTSALKWVIRCCPHIPRTLVHKL 1425
            GKW  +PP +  +  S                 +++  T+A+KWV++CCP +PR+LV KL
Sbjct: 47   GKWFPVPPFTHAINGSALGSELARGGGGASASKAAASETTAIKWVLKCCPELPRSLVQKL 106

Query: 1424 FRLRQVRMLPA--------AVQDHHRFKKVGAKDTLNSGDRIFLPDSVKETPAAAKHECH 1269
            FRLRQVR   A        A     + K+V AKD LN GD+IFLP SV+E P+  K ECH
Sbjct: 107  FRLRQVRRGSADGGSSDLGAQGQAPQLKRVAAKDLLNLGDQIFLPISVQELPSE-KQECH 165

Query: 1268 VTAREINFIRGLVIYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLV 1089
                E+NF+R L +YKDPA +V+NKP GMPVQGG+ IKRSLD +A  CL Y+YSEPPRLV
Sbjct: 166  CCEEEVNFVRSLELYKDPAIIVVNKPSGMPVQGGVGIKRSLDELAATCLSYDYSEPPRLV 225

Query: 1088 HRLDRDCSGILVMGRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVIGSPRR 909
            HRLDRDCSGILVMGRTQ SA VLHSIFREKT  AS    + +KRILQRRYWALVIGSPRR
Sbjct: 226  HRLDRDCSGILVMGRTQLSATVLHSIFREKTVDASKCEINNKKRILQRRYWALVIGSPRR 285

Query: 908  SKGFITAPLGKVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTG 729
            +KG + APLGKVV+DNGKSDRIT++D + ++SSQHA+TEYRV+ SSS+GYTWLELSPLTG
Sbjct: 286  TKGLVAAPLGKVVLDNGKSDRITVVDCAQMMSSQHAVTEYRVIQSSSHGYTWLELSPLTG 345

Query: 728  RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTK 549
            RKHQLRVHCAEVLGTPIVGDYKYGWQ H+KW  F  S+L++S+E+L KE+TLPFG+++ +
Sbjct: 346  RKHQLRVHCAEVLGTPIVGDYKYGWQVHRKWKQFPFSDLKNSNEDLCKEKTLPFGIDMER 405

Query: 548  GSISEKQPRLHLHCKQIVLPNISQALKNVQSVSNYDLSVVETLDLKVDLPPYMQRSWDVT 369
            GS+SEK PRLHLHCKQI+LPN+SQAL+N+ + S+YDLS + +++L   +PPYMQRSWD+ 
Sbjct: 406  GSVSEKHPRLHLHCKQIILPNVSQALQNLLASSDYDLSELPSIELVAPMPPYMQRSWDIL 465

Query: 368  NS 363
             S
Sbjct: 466  KS 467


>ref|XP_014633041.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X4
            [Glycine max]
          Length = 397

 Score =  536 bits (1381), Expect = 0.0
 Identities = 268/336 (79%), Positives = 293/336 (87%), Gaps = 2/336 (0%)
 Frame = -1

Query: 1367 KKVGAKDTLNSGDRIFLPDSVK--ETPAAAKHECHVTAREINFIRGLVIYKDPATLVLNK 1194
            +K  AKDTLN+GDRI LP SVK  +TP  +    H+T ++INFIR LVIYKDPA LVLNK
Sbjct: 66   QKGKAKDTLNTGDRILLPQSVKVKQTPTHS----HLTPQQINFIRTLVIYKDPAILVLNK 121

Query: 1193 PPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLVHRLDRDCSGILVMGRTQTSAAVLHS 1014
            PPGMPVQGGINIKRSLD VA A L Y YS+PPRLVHRLDRDCSGILVMGRT TS  VLHS
Sbjct: 122  PPGMPVQGGINIKRSLDAVAAASLNYGYSQPPRLVHRLDRDCSGILVMGRTHTSTTVLHS 181

Query: 1013 IFREKTSKASDDIGSTEKRILQRRYWALVIGSPRRSKGFITAPLGKVVVDNGKSDRITIL 834
            IFREKTS+ASDDIG  EKRILQRRYWALV+G PRR KG +TA LGKVVVDNG+SDRITI+
Sbjct: 182  IFREKTSRASDDIGK-EKRILQRRYWALVLGCPRRPKGLVTASLGKVVVDNGRSDRITIV 240

Query: 833  DHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGW 654
            D+STL+SSQHAITEYRV+ SSS GYTWLEL+PLTGRKHQLRVHCAEVLGTPIVGDYKYGW
Sbjct: 241  DNSTLMSSQHAITEYRVIASSSQGYTWLELTPLTGRKHQLRVHCAEVLGTPIVGDYKYGW 300

Query: 653  QAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSISEKQPRLHLHCKQIVLPNISQA 474
            QAH+KWGHFDL N+EDS EEL+ EE LPFGLNL KGSISE  PRLHLHCKQ+VLPNISQA
Sbjct: 301  QAHRKWGHFDLPNVEDSREELLNEEKLPFGLNLNKGSISENHPRLHLHCKQMVLPNISQA 360

Query: 473  LKNVQSVSNYDLSVVETLDLKVDLPPYMQRSWDVTN 366
            L+NVQS S+ DLS+VE L+L  DLPPYMQRSWDVTN
Sbjct: 361  LQNVQSASSCDLSLVEELELVADLPPYMQRSWDVTN 396


>ref|XP_014633042.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X5
            [Glycine max]
          Length = 395

 Score =  536 bits (1380), Expect = 0.0
 Identities = 267/332 (80%), Positives = 291/332 (87%), Gaps = 2/332 (0%)
 Frame = -1

Query: 1355 AKDTLNSGDRIFLPDSVK--ETPAAAKHECHVTAREINFIRGLVIYKDPATLVLNKPPGM 1182
            AKDTLN+GDRI LP SVK  +TP  +    H+T ++INFIR LVIYKDPA LVLNKPPGM
Sbjct: 68   AKDTLNTGDRILLPQSVKVKQTPTHS----HLTPQQINFIRTLVIYKDPAILVLNKPPGM 123

Query: 1181 PVQGGINIKRSLDVVAGACLKYEYSEPPRLVHRLDRDCSGILVMGRTQTSAAVLHSIFRE 1002
            PVQGGINIKRSLD VA A L Y YS+PPRLVHRLDRDCSGILVMGRT TS  VLHSIFRE
Sbjct: 124  PVQGGINIKRSLDAVAAASLNYGYSQPPRLVHRLDRDCSGILVMGRTHTSTTVLHSIFRE 183

Query: 1001 KTSKASDDIGSTEKRILQRRYWALVIGSPRRSKGFITAPLGKVVVDNGKSDRITILDHST 822
            KTS+ASDDIG  EKRILQRRYWALV+G PRR KG +TA LGKVVVDNG+SDRITI+D+ST
Sbjct: 184  KTSRASDDIGK-EKRILQRRYWALVLGCPRRPKGLVTASLGKVVVDNGRSDRITIVDNST 242

Query: 821  LLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHK 642
            L+SSQHAITEYRV+ SSS GYTWLEL+PLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAH+
Sbjct: 243  LMSSQHAITEYRVIASSSQGYTWLELTPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHR 302

Query: 641  KWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSISEKQPRLHLHCKQIVLPNISQALKNV 462
            KWGHFDL N+EDS EEL+ EE LPFGLNL KGSISE  PRLHLHCKQ+VLPNISQAL+NV
Sbjct: 303  KWGHFDLPNVEDSREELLNEEKLPFGLNLNKGSISENHPRLHLHCKQMVLPNISQALQNV 362

Query: 461  QSVSNYDLSVVETLDLKVDLPPYMQRSWDVTN 366
            QS S+ DLS+VE L+L  DLPPYMQRSWDVTN
Sbjct: 363  QSASSCDLSLVEELELVADLPPYMQRSWDVTN 394


>ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Populus trichocarpa]
          Length = 471

 Score =  524 bits (1349), Expect = e-180
 Identities = 261/415 (62%), Positives = 319/415 (76%), Gaps = 17/415 (4%)
 Frame = -1

Query: 1565 GKWLKLPPVSATVKTSENQVS--------SSGSTSALKWVIRCCPHIPRTLVHKLFRLRQ 1410
            GKW  LPP ++T+  S   ++        S+  T+ALKWV+RCCP +PR LV KLFRLRQ
Sbjct: 56   GKWFTLPPYTSTINGSVLGIALSARIPAKSASETTALKWVLRCCPELPRNLVQKLFRLRQ 115

Query: 1409 VRMLPAAVQD--------HHRFKKVGAKDTLNSGDRIFLPDSVKETPAAAKHECHVTARE 1254
            VR     ++          HR K+V AKD+++ GDRIFLP SVK  PA  K +CH    E
Sbjct: 116  VRRESPVMESCNLGDQGQEHRLKRVAAKDSMDVGDRIFLPISVKVLPAE-KQDCHCNEEE 174

Query: 1253 INFIRGLVIYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLVHRLDR 1074
            INFIRGL +YKD A +V+NKPPGMPVQGGI IKRSLD ++ +C   +YSEPPRLVHRLDR
Sbjct: 175  INFIRGLELYKDAAIIVVNKPPGMPVQGGIGIKRSLDELSASCFSSDYSEPPRLVHRLDR 234

Query: 1073 DCSGILVMGRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVIGSPRRSKGFI 894
            DCSGILVMGRTQTSA VLH+IFREKT  AS+D    ++RILQR+YWALVIGSPRR KG I
Sbjct: 235  DCSGILVMGRTQTSATVLHAIFREKTLAASNDDVGNKRRILQRKYWALVIGSPRRPKGLI 294

Query: 893  TAPLGKVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQL 714
            +APLGKVVVDNGKSDRIT++++S  LSSQHA+T+YRV+  SS+G+TWLELSPLTGRKHQL
Sbjct: 295  SAPLGKVVVDNGKSDRITVVENSQNLSSQHAVTQYRVI-ESSHGFTWLELSPLTGRKHQL 353

Query: 713  RVHCAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLED-SSEELVKEETLPFGLNLTKGSIS 537
            RVHCAEVLGTPIVGDYKY WQAH+ W     SN+ED S+++ + E+ LPF L+L  GSIS
Sbjct: 354  RVHCAEVLGTPIVGDYKYAWQAHRNWKQLQWSNIEDNSNDKSLSEKILPFALDLDSGSIS 413

Query: 536  EKQPRLHLHCKQIVLPNISQALKNVQSVSNYDLSVVETLDLKVDLPPYMQRSWDV 372
            EK PRLHLHCKQ+VLP++S+AL++VQ  S+YD S + +L     LPPYM++SWD+
Sbjct: 414  EKHPRLHLHCKQMVLPDVSKALQDVQLSSDYDFSQLASLKFDAPLPPYMKKSWDI 468


>ref|XP_018827853.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
            [Juglans regia]
          Length = 476

 Score =  524 bits (1349), Expect = e-179
 Identities = 270/425 (63%), Positives = 318/425 (74%), Gaps = 28/425 (6%)
 Frame = -1

Query: 1562 KWLKLPPVSATVK------------------TSENQVSSSGSTSALKWVIRCCPHIPRTL 1437
            KW  LPP + TV                    + +  S+S +T+ALKWV+RCCP +PR+L
Sbjct: 53   KWFTLPPFTPTVNGAAFGKEISRNRAPLKSGVTTSATSTSTTTTALKWVLRCCPDLPRSL 112

Query: 1436 VHKLFRLRQVRM---------LPAAVQDHHRFKKVGAKDTLNSGDRIFLPDSVKETPAAA 1284
            V KLFRLRQVR          + A VQ   R K+V AKD++N GDRIFLP +V+E P   
Sbjct: 113  VQKLFRLRQVRRESNDVGSTCVDAQVQQERRLKRVSAKDSMNVGDRIFLPITVQEFPFE- 171

Query: 1283 KHECHVTAREINFIRGLVIYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSE 1104
            K +CH    E NF+R LV+YKDPA +V+NKPPGMPVQGGI IK+SLD +A  CL Y YSE
Sbjct: 172  KQDCHCNEEEANFVRSLVLYKDPAIVVVNKPPGMPVQGGIGIKQSLDGLAATCLTYNYSE 231

Query: 1103 PPRLVHRLDRDCSGILVMGRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVI 924
             PRLVHRLDRD SGILVMGRTQTSAAVLHSIFREKT  A DD+ + E RIL+RRYWALVI
Sbjct: 232  TPRLVHRLDRDSSGILVMGRTQTSAAVLHSIFREKTFGAKDDVDN-EVRILERRYWALVI 290

Query: 923  GSPRRSKGFITAPLGKVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLEL 744
            GSPRR KG I+ PLGKVVVDNGKSDRITI+D++  +S+QHA+T+Y+V+ SS  GYTWLEL
Sbjct: 291  GSPRRQKGLISVPLGKVVVDNGKSDRITIVDNAQNMSAQHALTKYQVIKSSCYGYTWLEL 350

Query: 743  SPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLE-DSSEELVKEETLPF 567
            SPLTGRKHQLRVHCAEVLGTPIVGD KYGWQAHKK  H    +LE +S E + K +T+PF
Sbjct: 351  SPLTGRKHQLRVHCAEVLGTPIVGDLKYGWQAHKKLKHLPWPSLERESHENVTKGKTIPF 410

Query: 566  GLNLTKGSISEKQPRLHLHCKQIVLPNISQALKNVQSVSNYDLSVVETLDLKVDLPPYMQ 387
            GL+L  GSISEK PRLHLHCKQ+VLPN+S AL+NVQ  S+Y LS VE+L+L   LP YMQ
Sbjct: 411  GLDLQSGSISEKHPRLHLHCKQMVLPNVSMALQNVQFSSDYHLSQVESLELVAPLPSYMQ 470

Query: 386  RSWDV 372
            RSWD+
Sbjct: 471  RSWDI 475