BLASTX nr result

ID: Astragalus24_contig00017089 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00017089
         (385 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548542.3| PREDICTED: F-box/kelch-repeat protein At3g23...    57   1e-06
ref|XP_006604114.2| PREDICTED: F-box/kelch-repeat protein At3g23...    55   5e-06
ref|XP_020234615.1| F-box protein CPR30-like [Cajanus cajan] >gi...    54   6e-06

>ref|XP_003548542.3| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
 gb|KRH07043.1| hypothetical protein GLYMA_16G063500 [Glycine max]
          Length = 443

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 29/43 (67%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
 Frame = -1

Query: 127 TEREEARMEGLLP-ELVSKVLSHLPAKDLMRCKCVCKFWFDLI 2
           T+RE   ME  LP ELVS +LS LPAKDL++CK VCK WFDLI
Sbjct: 37  TKREVLSMEQHLPQELVSNILSRLPAKDLVKCKRVCKSWFDLI 79


>ref|XP_006604114.2| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 438

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 28/43 (65%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
 Frame = -1

Query: 127 TEREEARMEGLLP-ELVSKVLSHLPAKDLMRCKCVCKFWFDLI 2
           T+RE   ME  LP ELVS +LS LPA DL++CK VCK WFDLI
Sbjct: 37  TKREMVSMEPHLPQELVSNILSRLPAIDLVKCKSVCKSWFDLI 79


>ref|XP_020234615.1| F-box protein CPR30-like [Cajanus cajan]
 gb|KYP47856.1| F-box protein At4g12560 family [Cajanus cajan]
          Length = 402

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 26/35 (74%), Positives = 27/35 (77%)
 Frame = -1

Query: 106 MEGLLPELVSKVLSHLPAKDLMRCKCVCKFWFDLI 2
           ME L  ELVS VL+ LPAK LM CKCVCK WFDLI
Sbjct: 1   MENLPRELVSNVLTRLPAKVLMLCKCVCKSWFDLI 35


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