BLASTX nr result
ID: Astragalus24_contig00016860
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus24_contig00016860
(854 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|GAU29262.1| hypothetical protein TSUD_392120 [Trifolium subt... 221 2e-89
dbj|GAU37390.1| hypothetical protein TSUD_22640 [Trifolium subte... 223 2e-89
dbj|GAU38494.1| hypothetical protein TSUD_64740 [Trifolium subte... 220 4e-89
dbj|GAU36566.1| hypothetical protein TSUD_277720 [Trifolium subt... 223 1e-88
dbj|GAU31848.1| hypothetical protein TSUD_114590 [Trifolium subt... 222 9e-88
dbj|GAU29062.1| hypothetical protein TSUD_278180, partial [Trifo... 217 2e-87
dbj|GAU35928.1| hypothetical protein TSUD_69610 [Trifolium subte... 216 3e-87
dbj|GAU42401.1| hypothetical protein TSUD_324560 [Trifolium subt... 218 6e-87
dbj|GAU50179.1| hypothetical protein TSUD_408720, partial [Trifo... 220 1e-86
dbj|GAU36575.1| hypothetical protein TSUD_362450 [Trifolium subt... 216 4e-86
dbj|GAU42133.1| hypothetical protein TSUD_351070 [Trifolium subt... 229 9e-86
dbj|GAU34127.1| hypothetical protein TSUD_66060 [Trifolium subte... 209 2e-85
dbj|GAU11804.1| hypothetical protein TSUD_75550 [Trifolium subte... 240 1e-84
gb|PNX86022.1| ribonuclease H, partial [Trifolium pratense] 234 1e-84
gb|PNY02556.1| ribonuclease H, partial [Trifolium pratense] 234 6e-84
dbj|GAU25702.1| hypothetical protein TSUD_216310 [Trifolium subt... 245 8e-84
gb|PNX98658.1| ribonuclease H, partial [Trifolium pratense] 234 8e-84
gb|PNX92150.1| ribonuclease H [Trifolium pratense] 231 1e-83
dbj|GAU38566.1| hypothetical protein TSUD_322430 [Trifolium subt... 221 2e-83
dbj|GAU26046.1| hypothetical protein TSUD_225070 [Trifolium subt... 208 3e-83
>dbj|GAU29262.1| hypothetical protein TSUD_392120 [Trifolium subterraneum]
Length = 872
Score = 221 bits (562), Expect(3) = 2e-89
Identities = 106/190 (55%), Positives = 139/190 (73%), Gaps = 3/190 (1%)
Frame = +2
Query: 281 FFSANIREVTQIQGILDVYERASGQKTNFQKSEFFFSRNVLQAEKDIIATQLGVNVCLGT 460
F AN+ EV ++ IL YE ASGQ+ N KSE F SRN+ QA K+ ++ LGV + L T
Sbjct: 198 FCRANVAEVNELMRILHTYEAASGQEVNLVKSEVFISRNMSQAAKEDLSRILGVKLVLRT 257
Query: 461 GKYLSLPSLVGRSKKTLFKFIKHRIWHKINSWGGRMLTKAGKEVMIKSVLQSISTYFMSP 640
G YL LPS+VGRSKK +F +IK RIW +INSW GR L+KAGKE+MIKSVLQ+I +Y MS
Sbjct: 258 GIYLGLPSMVGRSKKAIFSYIKDRIWKRINSWRGRALSKAGKEIMIKSVLQAIPSYVMSM 317
Query: 641 FLIPSTLIEELERMLNGFWW-GGSGARN--RGIRWLAWEKLCVPKEHGGMGFRNLKAFNL 811
F++P++LI ++E+M+N FWW GS N +GI WLAWE+L PK HGG+GFRN +AFN
Sbjct: 318 FILPASLIHDIEKMINVFWWRSGSTINNNTKGIHWLAWERLACPKAHGGLGFRNFEAFNK 377
Query: 812 SLLGKQAWRL 841
+++ KQ W +
Sbjct: 378 AMVAKQVWNI 387
Score = 119 bits (299), Expect(3) = 2e-89
Identities = 57/80 (71%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = +1
Query: 1 VGKFGFGDQWIRW--MCIESVSLSVLVNQDRVGPILPGRGFRQGDPLSPYLFILCSECLT 174
+ K GF D WIRW MC+ SV+ SVL+N DRVGPILPGRG RQGDPLSPYLFIL +ECLT
Sbjct: 103 MSKMGFTDVWIRWVMMCVSSVNYSVLMNSDRVGPILPGRGLRQGDPLSPYLFILVTECLT 162
Query: 175 ALIHNSLTRGDLHGLSIYRG 234
ALIH S+ GDLHG+ I RG
Sbjct: 163 ALIHQSVGMGDLHGVRICRG 182
Score = 40.0 bits (92), Expect(3) = 2e-89
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +3
Query: 231 GAPSVSHLLFADDCFLFFSVQILE 302
GAP VSHLLFADDCFLF + E
Sbjct: 182 GAPEVSHLLFADDCFLFCRANVAE 205
>dbj|GAU37390.1| hypothetical protein TSUD_22640 [Trifolium subterraneum]
Length = 795
Score = 223 bits (567), Expect(3) = 2e-89
Identities = 103/190 (54%), Positives = 139/190 (73%), Gaps = 3/190 (1%)
Frame = +2
Query: 281 FFSANIREVTQIQGILDVYERASGQKTNFQKSEFFFSRNVLQAEKDIIATQLGVNVCLGT 460
F A++ EV ++ IL YE ASGQ+ N KSE F SRN+ QA K+ ++ LGV + LGT
Sbjct: 159 FCKASVAEVNELMMILHTYETASGQEVNLVKSEVFISRNMSQAAKEDLSRILGVKLVLGT 218
Query: 461 GKYLSLPSLVGRSKKTLFKFIKHRIWHKINSWGGRMLTKAGKEVMIKSVLQSISTYFMSP 640
G YL LPS+VGRSKK +F +IK RIW +INSW GR L+KAGKE+MIKSVLQ+I +Y MS
Sbjct: 219 GIYLGLPSMVGRSKKAIFSYIKDRIWRRINSWRGRALSKAGKEIMIKSVLQAIPSYVMSM 278
Query: 641 FLIPSTLIEELERMLNGFWWGGSGARN---RGIRWLAWEKLCVPKEHGGMGFRNLKAFNL 811
F++P++LI+++E+M+N FWW N +GI WLAWE+L PK +GG+GFRN +AFN
Sbjct: 279 FILPASLIDDIEKMINAFWWRNGSTNNNNTKGIHWLAWERLACPKAYGGLGFRNFEAFNK 338
Query: 812 SLLGKQAWRL 841
+++ KQ W +
Sbjct: 339 AMVAKQVWNI 348
Score = 117 bits (292), Expect(3) = 2e-89
Identities = 55/78 (70%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = +1
Query: 7 KFGFGDQWIRW--MCIESVSLSVLVNQDRVGPILPGRGFRQGDPLSPYLFILCSECLTAL 180
+ GF D WIRW MC+ SV+ SVL+N DRVGPI PGRG RQGDPLSPYLFIL +ECLTAL
Sbjct: 66 RMGFTDVWIRWVMMCVSSVNYSVLMNSDRVGPISPGRGLRQGDPLSPYLFILVTECLTAL 125
Query: 181 IHNSLTRGDLHGLSIYRG 234
IH ++ RGDLHG+ I RG
Sbjct: 126 IHQAVGRGDLHGVRICRG 143
Score = 40.4 bits (93), Expect(3) = 2e-89
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +3
Query: 231 GAPSVSHLLFADDCFLFFSVQILE 302
GAP VSHLLFADDCFLF + E
Sbjct: 143 GAPEVSHLLFADDCFLFCKASVAE 166
>dbj|GAU38494.1| hypothetical protein TSUD_64740 [Trifolium subterraneum]
Length = 664
Score = 220 bits (561), Expect(3) = 4e-89
Identities = 103/190 (54%), Positives = 136/190 (71%), Gaps = 3/190 (1%)
Frame = +2
Query: 281 FFSANIREVTQIQGILDVYERASGQKTNFQKSEFFFSRNVLQAEKDIIATQLGVNVCLGT 460
F AN+ EV ++ IL YE ASGQ+ N KSE F SRN+ QA K+ ++ LGV + LGT
Sbjct: 249 FCRANVAEVNELMRILHTYEAASGQEVNLVKSEVFISRNMSQAAKEDLSRILGVKLVLGT 308
Query: 461 GKYLSLPSLVGRSKKTLFKFIKHRIWHKINSWGGRMLTKAGKEVMIKSVLQSISTYFMSP 640
G YL LPS+VGRSKK +F +IK IW +INSW GR L+KAGKE+MIKSVLQ+I +Y MS
Sbjct: 309 GIYLGLPSMVGRSKKAIFSYIKDCIWKRINSWRGRALSKAGKEMMIKSVLQAIPSYVMSM 368
Query: 641 FLIPSTLIEELERMLNGFWWGGSGARN---RGIRWLAWEKLCVPKEHGGMGFRNLKAFNL 811
F++P++LI ++E+M+N FWW N +GI WL WE+L PK HGG+GFRN +AFN
Sbjct: 369 FILPASLIHDIEKMINAFWWRSGSTNNNNTKGIHWLVWERLACPKAHGGLGFRNFEAFNK 428
Query: 812 SLLGKQAWRL 841
+++ KQ W +
Sbjct: 429 AMVAKQVWNI 438
Score = 119 bits (297), Expect(3) = 4e-89
Identities = 56/78 (71%), Positives = 64/78 (82%), Gaps = 2/78 (2%)
Frame = +1
Query: 7 KFGFGDQWIRW--MCIESVSLSVLVNQDRVGPILPGRGFRQGDPLSPYLFILCSECLTAL 180
K GF D WIRW MC+ SV+ SVL+N DRVGPILPGRG RQGDPLSPYLFIL +ECL+AL
Sbjct: 156 KMGFTDVWIRWVMMCVNSVNYSVLMNSDRVGPILPGRGLRQGDPLSPYLFILVTECLSAL 215
Query: 181 IHNSLTRGDLHGLSIYRG 234
IH ++ RGDLHG+ I RG
Sbjct: 216 IHQAVGRGDLHGVRICRG 233
Score = 40.0 bits (92), Expect(3) = 4e-89
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +3
Query: 231 GAPSVSHLLFADDCFLFFSVQILE 302
GAP VSHLLFADDCFLF + E
Sbjct: 233 GAPEVSHLLFADDCFLFCRANVAE 256
>dbj|GAU36566.1| hypothetical protein TSUD_277720 [Trifolium subterraneum]
Length = 838
Score = 223 bits (567), Expect(3) = 1e-88
Identities = 103/191 (53%), Positives = 138/191 (72%), Gaps = 4/191 (2%)
Frame = +2
Query: 281 FFSANIREVTQIQGILDVYERASGQKTNFQKSEFFFSRNVLQAEKDIIATQLGVNVCLGT 460
F AN+ EV ++ IL YE ASGQ+ N KSE F SRN+ QA K+ ++ LGV + LGT
Sbjct: 163 FCRANVAEVNELMRILHTYETASGQQVNLLKSEVFISRNMSQAAKEDLSRILGVKLVLGT 222
Query: 461 GKYLSLPSLVGRSKKTLFKFIKHRIWHKINSWGGRMLTKAGKEVMIKSVLQSISTYFMSP 640
G YL LPS+VGRSKK +F +IK+RIW +INSW GR L+KAGKE+MIKSVLQ+I +Y MS
Sbjct: 223 GIYLGLPSMVGRSKKAIFSYIKYRIWKRINSWRGRALSKAGKEIMIKSVLQAIPSYVMSM 282
Query: 641 FLIPSTLIEELERMLNGFWWGGSGARN----RGIRWLAWEKLCVPKEHGGMGFRNLKAFN 808
F++P++LI+++E+M+N FWW N +GI WLAWE+L PK HG +GFRN +AFN
Sbjct: 283 FILPASLIDDIEKMINAFWWRSGNTNNNNNTKGIHWLAWERLACPKAHGSLGFRNFEAFN 342
Query: 809 LSLLGKQAWRL 841
++ K+ W +
Sbjct: 343 KAMAAKKVWHI 353
Score = 114 bits (286), Expect(3) = 1e-88
Identities = 54/78 (69%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
Frame = +1
Query: 7 KFGFGDQWIRW--MCIESVSLSVLVNQDRVGPILPGRGFRQGDPLSPYLFILCSECLTAL 180
K GF D WI+W MC+ SV+ SVL+N DRV PI PGRG RQGDPLSPYLFIL +ECLTAL
Sbjct: 70 KMGFSDVWIQWVMMCVSSVNYSVLMNSDRVDPISPGRGLRQGDPLSPYLFILVTECLTAL 129
Query: 181 IHNSLTRGDLHGLSIYRG 234
IH ++ RGDLHG+ I RG
Sbjct: 130 IHQAVGRGDLHGVRICRG 147
Score = 40.0 bits (92), Expect(3) = 1e-88
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +3
Query: 231 GAPSVSHLLFADDCFLFFSVQILE 302
GAP VSHLLFADDCFLF + E
Sbjct: 147 GAPEVSHLLFADDCFLFCRANVAE 170
>dbj|GAU31848.1| hypothetical protein TSUD_114590 [Trifolium subterraneum]
Length = 753
Score = 222 bits (565), Expect(3) = 9e-88
Identities = 104/192 (54%), Positives = 137/192 (71%), Gaps = 5/192 (2%)
Frame = +2
Query: 281 FFSANIREVTQIQGILDVYERASGQKTNFQKSEFFFSRNVLQAEKDIIATQLGVNVCLGT 460
F AN+ EV ++ IL YE ASGQ+ N KSE F SRN+ QA K+ ++ LGV + LG
Sbjct: 249 FCRANVAEVNELMRILHTYETASGQEVNLAKSEVFISRNMSQAAKEDLSRILGVKLVLGM 308
Query: 461 GKYLSLPSLVGRSKKTLFKFIKHRIWHKINSWGGRMLTKAGKEVMIKSVLQSISTYFMSP 640
G YL LPS+V RSKK +F +IK RIW +INSW G L+KAGKE+MIKSVLQ+I +Y MS
Sbjct: 309 GIYLGLPSMVARSKKAIFSYIKDRIWKRINSWRGCALSKAGKEIMIKSVLQAIPSYVMSM 368
Query: 641 FLIPSTLIEELERMLNGFWWGGSGARN-----RGIRWLAWEKLCVPKEHGGMGFRNLKAF 805
F++P++LI+++E+M+N FWW G N +GI WLAWEKL PK HGG+GFRN +AF
Sbjct: 369 FILPASLIDDIEKMINAFWWRGGSTNNNNNNTKGIHWLAWEKLACPKAHGGLGFRNFEAF 428
Query: 806 NLSLLGKQAWRL 841
N +++ KQ W +
Sbjct: 429 NKAMVAKQVWNI 440
Score = 112 bits (281), Expect(3) = 9e-88
Identities = 53/78 (67%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
Frame = +1
Query: 7 KFGFGDQWIRWM--CIESVSLSVLVNQDRVGPILPGRGFRQGDPLSPYLFILCSECLTAL 180
K GF + W+RW+ C+ SV+ SVL+N DRVGPI PGRG RQGDPLSPYLFIL +ECLTAL
Sbjct: 156 KMGFIEVWVRWVMICVSSVNYSVLMNSDRVGPISPGRGLRQGDPLSPYLFILVTECLTAL 215
Query: 181 IHNSLTRGDLHGLSIYRG 234
IH + RGDLHG+ I RG
Sbjct: 216 IHQVVGRGDLHGVRICRG 233
Score = 40.0 bits (92), Expect(3) = 9e-88
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +3
Query: 231 GAPSVSHLLFADDCFLFFSVQILE 302
GAP VSHLLFADDCFLF + E
Sbjct: 233 GAPEVSHLLFADDCFLFCRANVAE 256
>dbj|GAU29062.1| hypothetical protein TSUD_278180, partial [Trifolium subterraneum]
Length = 1410
Score = 217 bits (552), Expect(3) = 2e-87
Identities = 101/190 (53%), Positives = 136/190 (71%), Gaps = 3/190 (1%)
Frame = +2
Query: 281 FFSANIREVTQIQGILDVYERASGQKTNFQKSEFFFSRNVLQAEKDIIATQLGVNVCLGT 460
F AN+ EV ++ IL YE SGQ+ N KSE F SRN+ QA K+ ++ LGV + LGT
Sbjct: 780 FCRANVAEVNELMRILHTYETTSGQEVNLVKSEVFISRNMSQAAKEDLSRILGVKLVLGT 839
Query: 461 GKYLSLPSLVGRSKKTLFKFIKHRIWHKINSWGGRMLTKAGKEVMIKSVLQSISTYFMSP 640
G YL L S+VGRSKK +F +IK IW +INSW GR L+KAGKE+MIKSVLQ+IS+Y M+
Sbjct: 840 GIYLGLLSMVGRSKKAIFSYIKDHIWKRINSWRGRALSKAGKEIMIKSVLQAISSYVMNM 899
Query: 641 FLIPSTLIEELERMLNGFWWGGSGARN---RGIRWLAWEKLCVPKEHGGMGFRNLKAFNL 811
F++P++LI ++E+M+N FWW N +GI WLAWE+L PK +GG+GFRN +AFN
Sbjct: 900 FILPASLIRDIEKMINAFWWRSGSTNNNNTKGIHWLAWERLACPKAYGGLGFRNFEAFNK 959
Query: 812 SLLGKQAWRL 841
+++ KQ W +
Sbjct: 960 AMVAKQVWNI 969
Score = 117 bits (292), Expect(3) = 2e-87
Identities = 55/78 (70%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = +1
Query: 7 KFGFGDQWIRW--MCIESVSLSVLVNQDRVGPILPGRGFRQGDPLSPYLFILCSECLTAL 180
+ GF D WIRW MC+ SV+ SVL+N DRVGPI PGRG RQGDPLSPYLFIL +ECLTAL
Sbjct: 687 RMGFTDVWIRWVTMCVSSVNYSVLMNSDRVGPISPGRGLRQGDPLSPYLFILVTECLTAL 746
Query: 181 IHNSLTRGDLHGLSIYRG 234
IH ++ RGDLHG+ I RG
Sbjct: 747 IHQAVGRGDLHGVRICRG 764
Score = 40.0 bits (92), Expect(3) = 2e-87
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +3
Query: 231 GAPSVSHLLFADDCFLFFSVQILE 302
GAP VSHLLFADDCFLF + E
Sbjct: 764 GAPEVSHLLFADDCFLFCRANVAE 787
>dbj|GAU35928.1| hypothetical protein TSUD_69610 [Trifolium subterraneum]
Length = 1447
Score = 216 bits (549), Expect(3) = 3e-87
Identities = 101/191 (52%), Positives = 135/191 (70%), Gaps = 4/191 (2%)
Frame = +2
Query: 281 FFSANIREVTQIQGILDVYERASGQKTNFQKSEFFFSRNVLQAEKDIIATQLGVNVCLGT 460
F AN EV ++ IL YE ASGQ+ N KSE F SRN+ QA K+ ++ LGV + LGT
Sbjct: 919 FCRANAVEVNELMRILHTYETASGQEVNLLKSEVFISRNMSQAAKEDLSRILGVKLVLGT 978
Query: 461 GKYLSLPSLVGRSKKTLFKFIKHRIWHKINSWGGRMLTKAGKEVMIKSVLQSISTYFMSP 640
G YL LPS+V RSKK +F +IK RIW +INSW GR L+KA KE+MIKSVLQ+I +Y MS
Sbjct: 979 GIYLGLPSMVDRSKKAIFSYIKDRIWKRINSWRGRALSKADKEIMIKSVLQAIPSYVMSM 1038
Query: 641 FLIPSTLIEELERMLNGFWWGGSGA----RNRGIRWLAWEKLCVPKEHGGMGFRNLKAFN 808
F++P ++I+++E+++N FWW N+GI WLAWE+L PK HGG+GFRN +AFN
Sbjct: 1039 FILPDSIIDDIEKIINAFWWRSGNTNNNNNNKGIHWLAWERLACPKAHGGLGFRNFEAFN 1098
Query: 809 LSLLGKQAWRL 841
+++ KQ W +
Sbjct: 1099 KAMVAKQVWHI 1109
Score = 117 bits (294), Expect(3) = 3e-87
Identities = 55/78 (70%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = +1
Query: 7 KFGFGDQWIRW--MCIESVSLSVLVNQDRVGPILPGRGFRQGDPLSPYLFILCSECLTAL 180
K GF D WI+W MC+ SV+ SVL+N DRVGPI PGRG RQGDPLSPYLFIL +ECLTAL
Sbjct: 826 KMGFSDVWIQWVMMCVSSVNYSVLMNSDRVGPISPGRGLRQGDPLSPYLFILVTECLTAL 885
Query: 181 IHNSLTRGDLHGLSIYRG 234
IH ++ RGDLHG+ I RG
Sbjct: 886 IHQAVGRGDLHGMRICRG 903
Score = 39.3 bits (90), Expect(3) = 3e-87
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +3
Query: 231 GAPSVSHLLFADDCFLFFSVQILE 302
GAP VSHLLFADDCFLF +E
Sbjct: 903 GAPEVSHLLFADDCFLFCRANAVE 926
>dbj|GAU42401.1| hypothetical protein TSUD_324560 [Trifolium subterraneum]
Length = 958
Score = 218 bits (556), Expect(3) = 6e-87
Identities = 102/189 (53%), Positives = 137/189 (72%), Gaps = 5/189 (2%)
Frame = +2
Query: 290 ANIREVTQIQGILDVYERASGQKTNFQKSEFFFSRNVLQAEKDIIATQLGVNVCLGTGKY 469
AN+ EV ++ IL YE+ASGQ+ N K E F SRN+ A K+ ++ LGV + LGTG Y
Sbjct: 388 ANVVEVNELMRILHTYEQASGQEINLVKLEVFISRNMSHAAKEDLSRILGVRLVLGTGIY 447
Query: 470 LSLPSLVGRSKKTLFKFIKHRIWHKINSWGGRMLTKAGKEVMIKSVLQSISTYFMSPFLI 649
L LPS+VGRSKK +F FIK RIW +INSW GR L+KAGKE+MIKSVLQ+I +Y MS F++
Sbjct: 448 LGLPSMVGRSKKAIFSFIKDRIWKRINSWRGRALSKAGKEIMIKSVLQAIPSYVMSMFIL 507
Query: 650 PSTLIEELERMLNGFWW-----GGSGARNRGIRWLAWEKLCVPKEHGGMGFRNLKAFNLS 814
P++LI+++E+M+N FWW + N+GI WLAWE+L PK HGG+GF N +AFN +
Sbjct: 508 PNSLIDDIEKMINAFWWRSGTINNNNNNNKGIHWLAWERLACPKAHGGLGFCNFEAFNKA 567
Query: 815 LLGKQAWRL 841
++ KQ W +
Sbjct: 568 MVAKQVWNI 576
Score = 115 bits (287), Expect(3) = 6e-87
Identities = 55/78 (70%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
Frame = +1
Query: 7 KFGFGDQWIRW--MCIESVSLSVLVNQDRVGPILPGRGFRQGDPLSPYLFILCSECLTAL 180
K GF WIRW MC+ SV+ SVL+N DRVGPI PGRG RQGDPLSPYLFIL +ECLTAL
Sbjct: 292 KMGFTAVWIRWVMMCVSSVNYSVLMNYDRVGPISPGRGLRQGDPLSPYLFILVTECLTAL 351
Query: 181 IHNSLTRGDLHGLSIYRG 234
IH S+ RGD+HG+ I RG
Sbjct: 352 IHQSVGRGDIHGVRICRG 369
Score = 38.5 bits (88), Expect(3) = 6e-87
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3
Query: 231 GAPSVSHLLFADDCFLFFSVQILE 302
GAP VSHLLFADDCFL ++E
Sbjct: 369 GAPEVSHLLFADDCFLLCRANVVE 392
>dbj|GAU50179.1| hypothetical protein TSUD_408720, partial [Trifolium subterraneum]
Length = 1030
Score = 220 bits (560), Expect(3) = 1e-86
Identities = 102/189 (53%), Positives = 136/189 (71%), Gaps = 2/189 (1%)
Frame = +2
Query: 281 FFSANIREVTQIQGILDVYERASGQKTNFQKSEFFFSRNVLQAEKDIIATQLGVNVCLGT 460
F AN+ EV ++ IL YE SGQ+ N KSE F SRN+ QA K+ + LGV + LGT
Sbjct: 460 FCRANVAEVNELMRILHTYETTSGQEVNLVKSEVFISRNMSQAAKEDLYRILGVKMVLGT 519
Query: 461 GKYLSLPSLVGRSKKTLFKFIKHRIWHKINSWGGRMLTKAGKEVMIKSVLQSISTYFMSP 640
G YL L S+VGRSKKT+F +IK RIW +INSW GR L+KAGKE+MIK VLQ+I +Y MS
Sbjct: 520 GIYLGLSSMVGRSKKTIFSYIKDRIWKRINSWRGRALSKAGKEIMIKLVLQAIPSYVMSM 579
Query: 641 FLIPSTLIEELERMLNGFWWGGSGARN--RGIRWLAWEKLCVPKEHGGMGFRNLKAFNLS 814
F++P++LI+++E+M+N FWW G N +GI WL W++L PK HGG+GFRN +AFN +
Sbjct: 580 FILPASLIDDIEKMINAFWWRGGSTNNNTKGIHWLVWKRLACPKAHGGLGFRNFEAFNKA 639
Query: 815 LLGKQAWRL 841
++ KQ W +
Sbjct: 640 MVAKQVWNI 648
Score = 111 bits (277), Expect(3) = 1e-86
Identities = 53/78 (67%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
Frame = +1
Query: 7 KFGFGDQWIRW--MCIESVSLSVLVNQDRVGPILPGRGFRQGDPLSPYLFILCSECLTAL 180
+ GF D WIRW MC+ SV SVL+N DRVG I PGRG RQGDPL PYLFIL +ECLTAL
Sbjct: 367 RMGFADVWIRWVMMCVSSVYYSVLMNSDRVGSISPGRGLRQGDPLFPYLFILVTECLTAL 426
Query: 181 IHNSLTRGDLHGLSIYRG 234
IH ++ RGDLHG+ I RG
Sbjct: 427 IHQAVGRGDLHGVRICRG 444
Score = 40.0 bits (92), Expect(3) = 1e-86
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +3
Query: 231 GAPSVSHLLFADDCFLFFSVQILE 302
GAP VSHLLFADDCFLF + E
Sbjct: 444 GAPEVSHLLFADDCFLFCRANVAE 467
>dbj|GAU36575.1| hypothetical protein TSUD_362450 [Trifolium subterraneum]
Length = 1524
Score = 216 bits (551), Expect(3) = 4e-86
Identities = 103/189 (54%), Positives = 138/189 (73%), Gaps = 5/189 (2%)
Frame = +2
Query: 281 FFSANIREVTQIQGILDVYERASGQKTNFQKSEFFFSRNVLQAEKDIIATQLGVNVCLGT 460
F AN+ EV ++ IL YE+ASGQ+ N KSE F SRN+ A K+ ++ LGV + LGT
Sbjct: 1015 FCRANVVEVNELMRILHSYEQASGQEINLVKSEVFISRNMSHATKEDLSRILGVRLVLGT 1074
Query: 461 GKYLSLPSLVGRSKKTLFKFIKHRIWHKINSWGGRMLTKAGKEVMIKSVLQSISTYFMSP 640
G YL LPS+VG+SKK +F FIK RIW +INSW GR L+KAGKE+MIKSVLQ+I +Y MS
Sbjct: 1075 GIYLGLPSMVGKSKKAIFSFIKDRIWKRINSWRGRALSKAGKEIMIKSVLQAIPSYVMSM 1134
Query: 641 FLIPSTLIEELERMLNGFWW-----GGSGARNRGIRWLAWEKLCVPKEHGGMGFRNLKAF 805
F++P++LI+++E+M+N FWW + N+GI WLAWE+L PK GG+GFRN +AF
Sbjct: 1135 FILPTSLIDDIEKMINAFWWRSGTINNNNNNNKGIHWLAWERLACPKARGGLGFRNFEAF 1194
Query: 806 NLSLLGKQA 832
N +++ KQA
Sbjct: 1195 NKAMVAKQA 1203
Score = 112 bits (279), Expect(3) = 4e-86
Identities = 54/78 (69%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
Frame = +1
Query: 7 KFGFGDQWIRW--MCIESVSLSVLVNQDRVGPILPGRGFRQGDPLSPYLFILCSECLTAL 180
K F D WIRW MC+ SV+ SVL+N DRVGPI PGRG RQGDPLSPYLFIL +ECLTAL
Sbjct: 922 KMRFTDVWIRWVMMCVGSVNYSVLMNYDRVGPISPGRGLRQGDPLSPYLFILVTECLTAL 981
Query: 181 IHNSLTRGDLHGLSIYRG 234
I+ S+ RGD+HG+ I RG
Sbjct: 982 IYQSVGRGDIHGVRICRG 999
Score = 40.8 bits (94), Expect(3) = 4e-86
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +3
Query: 231 GAPSVSHLLFADDCFLFFSVQILE 302
GAP VSHLLFADDCFLF ++E
Sbjct: 999 GAPEVSHLLFADDCFLFCRANVVE 1022
>dbj|GAU42133.1| hypothetical protein TSUD_351070 [Trifolium subterraneum]
Length = 878
Score = 229 bits (584), Expect(2) = 9e-86
Identities = 109/203 (53%), Positives = 145/203 (71%)
Frame = +2
Query: 233 GTIGVSPLVCR*LFSFFFSANIREVTQIQGILDVYERASGQKTNFQKSEFFFSRNVLQAE 412
G + VS ++ F AN+ EV ++ IL YE+ASGQ+ N KSE F SRN+ QA
Sbjct: 191 GALEVSHILFADHCFLFCRANVAEVNELLRILHTYEQASGQEVNLVKSEVFISRNMSQAA 250
Query: 413 KDIIATQLGVNVCLGTGKYLSLPSLVGRSKKTLFKFIKHRIWHKINSWGGRMLTKAGKEV 592
K+ ++ LGV + LGTG YL LPS+VGRSKK LF +I RIW INSW GR L+KAGKE+
Sbjct: 251 KEDLSRILGVKLVLGTGIYLGLPSMVGRSKKALFSYINDRIWKIINSWRGRALSKAGKEI 310
Query: 593 MIKSVLQSISTYFMSPFLIPSTLIEELERMLNGFWWGGSGARNRGIRWLAWEKLCVPKEH 772
MIKSVLQ+IS+Y MS F++ ++LI+++E+M+N FWW G N+GI WLAWE+L PK H
Sbjct: 311 MIKSVLQAISSYVMSMFILHASLIDDIEKMINAFWWRGGNNNNKGIHWLAWERLACPKAH 370
Query: 773 GGMGFRNLKAFNLSLLGKQAWRL 841
GG+GFRN +AFN +++ KQ W +
Sbjct: 371 GGLGFRNFEAFNKAMVAKQVWNI 393
Score = 117 bits (293), Expect(2) = 9e-86
Identities = 56/78 (71%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = +1
Query: 7 KFGFGDQWIRW--MCIESVSLSVLVNQDRVGPILPGRGFRQGDPLSPYLFILCSECLTAL 180
K GF D WIRW MC+ SV+ SVL+N D+VGPILPGRG RQGDPLSPYLFIL +ECLTAL
Sbjct: 114 KMGFTDVWIRWVMMCVSSVNYSVLMNYDQVGPILPGRGLRQGDPLSPYLFILVTECLTAL 173
Query: 181 IHNSLTRGDLHGLSIYRG 234
IH + RGDLHG+ I RG
Sbjct: 174 IHQVVGRGDLHGVRICRG 191
>dbj|GAU34127.1| hypothetical protein TSUD_66060 [Trifolium subterraneum]
Length = 1499
Score = 209 bits (531), Expect(3) = 2e-85
Identities = 101/190 (53%), Positives = 132/190 (69%), Gaps = 3/190 (1%)
Frame = +2
Query: 281 FFSANIREVTQIQGILDVYERASGQKTNFQKSEFFFSRNVLQAEKDIIATQLGVNVCLGT 460
F AN+ EV ++ IL YE+ASGQ+ N KSE F LGV + LGT
Sbjct: 840 FCRANVAEVNELMRILHTYEQASGQEINLGKSEVFI---------------LGVRLVLGT 884
Query: 461 GKYLSLPSLVGRSKKTLFKFIKHRIWHKINSWGGRMLTKAGKEVMIKSVLQSISTYFMSP 640
G YL LPS+VGRSKKT+F +IK RIW +INSW GR L+KAGKEVMIKSVLQ+I +Y MS
Sbjct: 885 GIYLGLPSMVGRSKKTIFSYIKDRIWKRINSWRGRALSKAGKEVMIKSVLQAIPSYVMSM 944
Query: 641 FLIPSTLIEELERMLNGFWWGG---SGARNRGIRWLAWEKLCVPKEHGGMGFRNLKAFNL 811
F++P++LI ++E+M+N FWW G + N+GI WLAW++L PK HGG+GFRN +AFN
Sbjct: 945 FILPTSLIADIEKMINAFWWRGGNNNNNNNKGIHWLAWDRLACPKAHGGLGFRNFEAFNK 1004
Query: 812 SLLGKQAWRL 841
+++ KQ W +
Sbjct: 1005 AVVAKQVWNI 1014
Score = 118 bits (295), Expect(3) = 2e-85
Identities = 55/78 (70%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = +1
Query: 7 KFGFGDQWIRW--MCIESVSLSVLVNQDRVGPILPGRGFRQGDPLSPYLFILCSECLTAL 180
K GF D WIRW MC+ SV+ SVL+N DRVGPI PGRG RQGDPLSPYLFIL +ECLTAL
Sbjct: 747 KMGFSDVWIRWVMMCVSSVNYSVLMNYDRVGPISPGRGLRQGDPLSPYLFILVTECLTAL 806
Query: 181 IHNSLTRGDLHGLSIYRG 234
IH ++ RGDLHG+ + RG
Sbjct: 807 IHRAVGRGDLHGVRVCRG 824
Score = 40.0 bits (92), Expect(3) = 2e-85
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +3
Query: 231 GAPSVSHLLFADDCFLFFSVQILE 302
GAP VSHLLFADDCFLF + E
Sbjct: 824 GAPEVSHLLFADDCFLFCRANVAE 847
>dbj|GAU11804.1| hypothetical protein TSUD_75550 [Trifolium subterraneum]
Length = 1178
Score = 240 bits (613), Expect(2) = 1e-84
Identities = 114/202 (56%), Positives = 149/202 (73%), Gaps = 4/202 (1%)
Frame = +2
Query: 248 SPLVCR*LFS----FFFSANIREVTQIQGILDVYERASGQKTNFQKSEFFFSRNVLQAEK 415
+P++ LF+ FF AN+ E ++ IL +YE ASGQ N QKSEF+ SRNV +
Sbjct: 370 APIITHLLFADDCFLFFRANVTEAAALKNILSIYEVASGQAINLQKSEFYCSRNVPSDVR 429
Query: 416 DIIATQLGVNVCLGTGKYLSLPSLVGRSKKTLFKFIKHRIWHKINSWGGRMLTKAGKEVM 595
D IA QLGV LGTGKYL LPS++GRSKK+ FKFIK RIW KINSW R L++AG+EVM
Sbjct: 430 DSIANQLGVLQVLGTGKYLGLPSMIGRSKKSTFKFIKDRIWRKINSWSSRHLSQAGREVM 489
Query: 596 IKSVLQSISTYFMSPFLIPSTLIEELERMLNGFWWGGSGARNRGIRWLAWEKLCVPKEHG 775
IKSVLQ+I Y MS FL+P+TLI+++E+MLN FWWG + RG+ WL+WE+L V K++G
Sbjct: 490 IKSVLQTIPAYVMSTFLLPNTLIDDIEKMLNSFWWGHTSGSARGLHWLSWERLAVSKDYG 549
Query: 776 GMGFRNLKAFNLSLLGKQAWRL 841
GMGF+NL+AFNL+++G W +
Sbjct: 550 GMGFKNLQAFNLAMIGGYKWSI 571
Score = 102 bits (255), Expect(2) = 1e-84
Identities = 48/77 (62%), Positives = 58/77 (75%), Gaps = 2/77 (2%)
Frame = +1
Query: 7 KFGFGDQWIRW--MCIESVSLSVLVNQDRVGPILPGRGFRQGDPLSPYLFILCSECLTAL 180
K GF QWI W MC+E+V SVLVN VGPI+PGRG RQGDPLSPYLFI+C+E L+AL
Sbjct: 292 KMGFSQQWISWIMMCVETVDYSVLVNGHTVGPIIPGRGLRQGDPLSPYLFIICAEGLSAL 351
Query: 181 IHNSLTRGDLHGLSIYR 231
I + +G+LHG+ I R
Sbjct: 352 IRKAEIKGELHGIKICR 368
>gb|PNX86022.1| ribonuclease H, partial [Trifolium pratense]
Length = 494
Score = 234 bits (597), Expect(2) = 1e-84
Identities = 113/200 (56%), Positives = 146/200 (73%), Gaps = 4/200 (2%)
Frame = +2
Query: 248 SPLVCR*LFS----FFFSANIREVTQIQGILDVYERASGQKTNFQKSEFFFSRNVLQAEK 415
+PLV LF+ F ANI E T + +LD Y ASGQ+ N KSE FFS+N+ +A +
Sbjct: 173 APLVSHLLFADDCFLFCRANIMEATHLMSLLDTYSAASGQEINLSKSEVFFSKNLSKAAQ 232
Query: 416 DIIATQLGVNVCLGTGKYLSLPSLVGRSKKTLFKFIKHRIWHKINSWGGRMLTKAGKEVM 595
+ ++ +GV +GTG YL LPS+VGRSKK F +IK RIW KINSW GR L+KAGK+VM
Sbjct: 233 EDLSGIMGVKHVMGTGTYLGLPSMVGRSKKATFGYIKDRIWKKINSWRGRALSKAGKDVM 292
Query: 596 IKSVLQSISTYFMSPFLIPSTLIEELERMLNGFWWGGSGARNRGIRWLAWEKLCVPKEHG 775
IKSVLQSI +Y MS +L+P ++I ++ERMLN FWWGG G N+GIRWLAW++L PK G
Sbjct: 293 IKSVLQSIPSYIMSVYLLPDSIITDIERMLNSFWWGG-GTNNKGIRWLAWDRLARPKSEG 351
Query: 776 GMGFRNLKAFNLSLLGKQAW 835
G+GFRN +AFN+S++ KQAW
Sbjct: 352 GLGFRNFQAFNMSMVAKQAW 371
Score = 108 bits (271), Expect(2) = 1e-84
Identities = 50/78 (64%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
Frame = +1
Query: 7 KFGFGDQWIRWM--CIESVSLSVLVNQDRVGPILPGRGFRQGDPLSPYLFILCSECLTAL 180
+ GF D+W+ WM C+ SV+ SVL+N D+VGPI PGRG RQGDPLSPYLFIL +E LTAL
Sbjct: 95 RLGFSDKWVHWMMMCVSSVNYSVLMNFDKVGPIYPGRGLRQGDPLSPYLFILATEGLTAL 154
Query: 181 IHNSLTRGDLHGLSIYRG 234
I S+ RGD+HG+ I RG
Sbjct: 155 IKQSIARGDIHGVKICRG 172
>gb|PNY02556.1| ribonuclease H, partial [Trifolium pratense]
Length = 1024
Score = 234 bits (596), Expect(2) = 6e-84
Identities = 112/201 (55%), Positives = 147/201 (73%), Gaps = 4/201 (1%)
Frame = +2
Query: 248 SPLVCR*LFS----FFFSANIREVTQIQGILDVYERASGQKTNFQKSEFFFSRNVLQAEK 415
+P V LF+ F +N++E TQ+ IL Y+ ASGQ+ N KSE FFSRN+ +A +
Sbjct: 627 APTVSHLLFADDCFLFCRSNLQEATQLMSILKTYQEASGQEINMTKSEVFFSRNLSRAAQ 686
Query: 416 DIIATQLGVNVCLGTGKYLSLPSLVGRSKKTLFKFIKHRIWHKINSWGGRMLTKAGKEVM 595
+ ++ +GV LGTG YL LPS+VGRSKK F ++K RIW +INSW GR L+KAGKEVM
Sbjct: 687 EDLSKIMGVRHVLGTGTYLGLPSMVGRSKKATFAYVKDRIWKRINSWRGRPLSKAGKEVM 746
Query: 596 IKSVLQSISTYFMSPFLIPSTLIEELERMLNGFWWGGSGARNRGIRWLAWEKLCVPKEHG 775
IKSVLQ+I +Y MS +L+P T+I ++ERM N FWWGG GA N+GIRWL+W+++ PKE G
Sbjct: 747 IKSVLQAIPSYVMSIYLLPETMIRDIERMFNSFWWGG-GAENKGIRWLSWDRMTYPKEFG 805
Query: 776 GMGFRNLKAFNLSLLGKQAWR 838
GMGFRNL FN+SL+ KQ W+
Sbjct: 806 GMGFRNLHLFNMSLVAKQGWK 826
Score = 106 bits (265), Expect(2) = 6e-84
Identities = 49/78 (62%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
Frame = +1
Query: 7 KFGFGDQWIRWM--CIESVSLSVLVNQDRVGPILPGRGFRQGDPLSPYLFILCSECLTAL 180
+ GF ++WI WM C+ SV+ SVL+N +RVGPI PGRG RQGDPLSPYLFIL +E LT L
Sbjct: 549 RLGFAEKWIHWMMLCVSSVNYSVLINFERVGPIFPGRGLRQGDPLSPYLFILIAEGLTTL 608
Query: 181 IHNSLTRGDLHGLSIYRG 234
I +S+ RGD+HG+ I RG
Sbjct: 609 IKHSVARGDIHGVKICRG 626
>dbj|GAU25702.1| hypothetical protein TSUD_216310 [Trifolium subterraneum]
Length = 1869
Score = 245 bits (626), Expect(2) = 8e-84
Identities = 119/202 (58%), Positives = 150/202 (74%), Gaps = 4/202 (1%)
Frame = +2
Query: 248 SPLVCR*LFS----FFFSANIREVTQIQGILDVYERASGQKTNFQKSEFFFSRNVLQAEK 415
+P + LF+ FF A I E T ++ ILDVYE ASGQ N QKSEF+ +RNV +
Sbjct: 1368 APTISHLLFADDCFLFFKATINEATVLKNILDVYEVASGQAINLQKSEFYCNRNVNPEIR 1427
Query: 416 DIIATQLGVNVCLGTGKYLSLPSLVGRSKKTLFKFIKHRIWHKINSWGGRMLTKAGKEVM 595
+ IA L V LGTGKYLSLPS++G SKK+ FKFIK RIW K+NSW R L++AG+EVM
Sbjct: 1428 EAIANHLEVAQVLGTGKYLSLPSMIGMSKKSTFKFIKDRIWRKVNSWSSRHLSQAGREVM 1487
Query: 596 IKSVLQSISTYFMSPFLIPSTLIEELERMLNGFWWGGSGARNRGIRWLAWEKLCVPKEHG 775
IKS+LQSI TY MS FL+PSTL +E+E+M+N WWG +G NRG+ WL+WE+L V K+ G
Sbjct: 1488 IKSILQSIPTYVMSVFLLPSTLNDEIEKMINSLWWGHNGNNNRGLHWLSWERLSVSKDQG 1547
Query: 776 GMGFRNLKAFNLSLLGKQAWRL 841
GMGF+NL+AFNL++LGKQAW L
Sbjct: 1548 GMGFKNLQAFNLAMLGKQAWNL 1569
Score = 94.7 bits (234), Expect(2) = 8e-84
Identities = 44/79 (55%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Frame = +1
Query: 1 VGKFGFGDQWIRW--MCIESVSLSVLVNQDRVGPILPGRGFRQGDPLSPYLFILCSECLT 174
+ K GF QWI W +C+E V SV+VN +VGP++P RG RQGDPLSPYLFI+C+E L+
Sbjct: 1288 MSKMGFSQQWIDWIMLCVEIVDYSVIVNGHKVGPVVPDRGLRQGDPLSPYLFIICAEGLS 1347
Query: 175 ALIHNSLTRGDLHGLSIYR 231
ALI + R LHG+ I R
Sbjct: 1348 ALIRQAEARKGLHGIKICR 1366
>gb|PNX98658.1| ribonuclease H, partial [Trifolium pratense]
Length = 1119
Score = 234 bits (596), Expect(2) = 8e-84
Identities = 114/205 (55%), Positives = 148/205 (72%), Gaps = 4/205 (1%)
Frame = +2
Query: 248 SPLVCR*LFS----FFFSANIREVTQIQGILDVYERASGQKTNFQKSEFFFSRNVLQAEK 415
+P+V LF+ F ANI E T + +LDVY ASGQ+ N KSE +FSRN+ +A +
Sbjct: 683 APVVSHLLFADDCFLFCRANIAEATHMMSLLDVYGAASGQEINLSKSEVYFSRNLSKAAQ 742
Query: 416 DIIATQLGVNVCLGTGKYLSLPSLVGRSKKTLFKFIKHRIWHKINSWGGRMLTKAGKEVM 595
+ ++ +GV +GTG YL LPS+VGRSKK F +IK R+W KINSW GR L+KAGK+VM
Sbjct: 743 EDLSGIMGVKHVMGTGTYLGLPSMVGRSKKATFGYIKDRMWRKINSWRGRALSKAGKDVM 802
Query: 596 IKSVLQSISTYFMSPFLIPSTLIEELERMLNGFWWGGSGARNRGIRWLAWEKLCVPKEHG 775
IKSVLQ+I +Y MS FLIP ++I ++ERMLN FWWGG G N+GIRWLAW+KL PK G
Sbjct: 803 IKSVLQAIPSYIMSIFLIPDSIINDIERMLNSFWWGG-GTNNKGIRWLAWDKLARPKADG 861
Query: 776 GMGFRNLKAFNLSLLGKQAWRLQSQ 850
G+GFRN AFN++++ KQAW S+
Sbjct: 862 GLGFRNFHAFNMAMVAKQAWNFMSK 886
Score = 106 bits (264), Expect(2) = 8e-84
Identities = 50/78 (64%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = +1
Query: 7 KFGFGDQWIRWM--CIESVSLSVLVNQDRVGPILPGRGFRQGDPLSPYLFILCSECLTAL 180
+ GF ++WI+WM C+ SV+ SVL+N D+VGPI PGRG RQGDPLSPYLFIL +E LTAL
Sbjct: 605 RMGFSNKWIQWMMMCVSSVNYSVLMNFDKVGPIHPGRGLRQGDPLSPYLFILATEGLTAL 664
Query: 181 IHNSLTRGDLHGLSIYRG 234
I +SL RG++HG+ I RG
Sbjct: 665 IKHSLERGEIHGVKICRG 682
>gb|PNX92150.1| ribonuclease H [Trifolium pratense]
Length = 682
Score = 231 bits (589), Expect(2) = 1e-83
Identities = 106/187 (56%), Positives = 138/187 (73%)
Frame = +2
Query: 281 FFSANIREVTQIQGILDVYERASGQKTNFQKSEFFFSRNVLQAEKDIIATQLGVNVCLGT 460
F AN EV Q+ IL YE+ASGQ+ N KSE F SRN+ QA + +A LGV LGT
Sbjct: 249 FCRANAAEVNQLLSILHTYEQASGQEINLSKSEVFISRNMSQAAQSDLAGILGVRHALGT 308
Query: 461 GKYLSLPSLVGRSKKTLFKFIKHRIWHKINSWGGRMLTKAGKEVMIKSVLQSISTYFMSP 640
G YL LPS+VGRSKK +F +IK RIW +INSW GR L+KAGKEVMIKSVLQ+I Y MS
Sbjct: 309 GVYLGLPSMVGRSKKAVFSYIKDRIWKRINSWRGRALSKAGKEVMIKSVLQAIPAYVMSM 368
Query: 641 FLIPSTLIEELERMLNGFWWGGSGARNRGIRWLAWEKLCVPKEHGGMGFRNLKAFNLSLL 820
+++PS+ ++++E+M+N FWWGG + R I WLAWE+L PK+ GG+GFRN +AFN++++
Sbjct: 369 YILPSSFVDDIEKMINAFWWGGGNSHGRSIHWLAWERLACPKDKGGLGFRNFEAFNMAMV 428
Query: 821 GKQAWRL 841
KQAW +
Sbjct: 429 AKQAWNI 435
Score = 108 bits (269), Expect(2) = 1e-83
Identities = 50/75 (66%), Positives = 62/75 (82%), Gaps = 2/75 (2%)
Frame = +1
Query: 16 FGDQWIRWM--CIESVSLSVLVNQDRVGPILPGRGFRQGDPLSPYLFILCSECLTALIHN 189
FG++WI+WM C+ SV+ SVL+N D+VGPI PGRG RQGDPLSPYLFIL +E LTALIH
Sbjct: 159 FGEKWIQWMMMCVSSVNYSVLMNFDKVGPIQPGRGLRQGDPLSPYLFILVAEGLTALIHQ 218
Query: 190 SLTRGDLHGLSIYRG 234
++ RGD+HG+ I RG
Sbjct: 219 AVRRGDIHGMRICRG 233
>dbj|GAU38566.1| hypothetical protein TSUD_322430 [Trifolium subterraneum]
Length = 1436
Score = 221 bits (563), Expect(2) = 2e-83
Identities = 105/190 (55%), Positives = 140/190 (73%), Gaps = 3/190 (1%)
Frame = +2
Query: 281 FFSANIREVTQIQGILDVYERASGQKTNFQKSEFFFSRNVLQAEKDIIATQLGVNVCLGT 460
F AN+ EV ++ IL YE+ASGQ+ N KSE F SRN+ A K+ ++ LG + LGT
Sbjct: 892 FCRANVVEVNELMRILHTYEQASGQEINLGKSEVFISRNMSHAAKEDLSRILGFRLVLGT 951
Query: 461 GKYLSLPSLVGRSKKTLFKFIKHRIWHKINSWGGRMLTKAGKEVMIKSVLQSISTYFMSP 640
G YL LPS+VGRSKKT+F +I+ RIW +INSW R L+KAGKEVMIKSVLQ+I +Y MS
Sbjct: 952 GIYLGLPSMVGRSKKTIFSYIEDRIWKRINSWRERALSKAGKEVMIKSVLQAIPSYVMSM 1011
Query: 641 FLIPSTLIEELERMLNGFWWGGSGARNR---GIRWLAWEKLCVPKEHGGMGFRNLKAFNL 811
F++P++LI+++E+M+N FWW GS + N I WLAW+KL PK+HGG+GFRN +AFN
Sbjct: 1012 FILPASLIDDIEKMINVFWWRGSNSNNNTNTDIHWLAWDKLACPKDHGGLGFRNFEAFNK 1071
Query: 812 SLLGKQAWRL 841
++ KQAW +
Sbjct: 1072 VMVAKQAWNI 1081
Score = 117 bits (294), Expect(2) = 2e-83
Identities = 56/78 (71%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = +1
Query: 7 KFGFGDQWIRW--MCIESVSLSVLVNQDRVGPILPGRGFRQGDPLSPYLFILCSECLTAL 180
K GF D WIRW MC+ SV+ SVL+N DRVGPI PGRG RQGDPLSPYLFIL +ECLTAL
Sbjct: 799 KMGFTDVWIRWVMMCVSSVNYSVLMNYDRVGPISPGRGLRQGDPLSPYLFILVTECLTAL 858
Query: 181 IHNSLTRGDLHGLSIYRG 234
IH ++ RGDLHG+ I RG
Sbjct: 859 IHRAVGRGDLHGVRICRG 876
>dbj|GAU26046.1| hypothetical protein TSUD_225070 [Trifolium subterraneum]
Length = 931
Score = 208 bits (530), Expect(3) = 3e-83
Identities = 99/190 (52%), Positives = 134/190 (70%), Gaps = 3/190 (1%)
Frame = +2
Query: 281 FFSANIREVTQIQGILDVYERASGQKTNFQKSEFFFSRNVLQAEKDIIATQLGVNVCLGT 460
F N+ EV ++ IL YE+ASGQ+ N KSE F SRN+ A K+ ++ LGV + LGT
Sbjct: 337 FCRVNVVEVNELMRILHTYEQASGQEINLVKSEVFISRNMSHAAKEDLSRILGVRLVLGT 396
Query: 461 GKYLSLPSLVGRSKKTLFKFIKHRIWHKINSWGGRMLTKAGKEVMIKSVLQSISTYFMSP 640
YL LPS+VGRSKK +F +IK RIW +INSW GR L+KAGKE+MIKS LQ+I +Y MS
Sbjct: 397 DVYLGLPSMVGRSKKAIFSYIKDRIWKRINSWRGRALSKAGKEIMIKSGLQAIPSYVMSM 456
Query: 641 FLIPSTLIEELERMLNGFWWGG---SGARNRGIRWLAWEKLCVPKEHGGMGFRNLKAFNL 811
F++P++LI+++E+M+N FWW G + N+GI WLAWE+L PK HGG+GFRN + +
Sbjct: 457 FILPASLIDDIEKMINAFWWRGDNNNNNNNKGIHWLAWERLACPKAHGGLGFRNFEGY-- 514
Query: 812 SLLGKQAWRL 841
+ KQ W +
Sbjct: 515 --VAKQVWNI 522
Score = 108 bits (271), Expect(3) = 3e-83
Identities = 51/78 (65%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
Frame = +1
Query: 7 KFGFGDQWIRWM--CIESVSLSVLVNQDRVGPILPGRGFRQGDPLSPYLFILCSECLTAL 180
K GF + WIRW+ C+ SV+ SVL+N DRV PI PGRG +QGDPLSPYLFIL +ECL AL
Sbjct: 244 KMGFTEVWIRWVMTCVSSVNYSVLMNYDRVDPISPGRGLQQGDPLSPYLFILVTECLIAL 303
Query: 181 IHNSLTRGDLHGLSIYRG 234
IH ++ RGDLHG+ I RG
Sbjct: 304 IHQTIGRGDLHGVKICRG 321
Score = 42.4 bits (98), Expect(3) = 3e-83
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +3
Query: 231 GAPSVSHLLFADDCFLFFSVQILE 302
GAP VSHLLFADDCFLF V ++E
Sbjct: 321 GAPEVSHLLFADDCFLFCRVNVVE 344