BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00016854
         (750 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX98275.1| gag-pol polyprotein [Trifolium pratense]               236   4e-73
gb|PNX79719.1| retrotransposon-related protein, partial [Trifoli...   231   4e-72
dbj|GAU30744.1| hypothetical protein TSUD_145410 [Trifolium subt...   240   3e-71
gb|PNX81943.1| gag-pol polyprotein [Trifolium pratense]               235   6e-71
dbj|GAU32026.1| hypothetical protein TSUD_147220 [Trifolium subt...   233   1e-70
dbj|GAU20036.1| hypothetical protein TSUD_381280 [Trifolium subt...   240   5e-69
dbj|GAU21179.1| hypothetical protein TSUD_10960 [Trifolium subte...   226   3e-68
dbj|GAU41760.1| hypothetical protein TSUD_13610 [Trifolium subte...   233   3e-67
dbj|GAU34163.1| hypothetical protein TSUD_162630 [Trifolium subt...   234   3e-67
dbj|GAU45489.1| hypothetical protein TSUD_191080 [Trifolium subt...   233   3e-67
gb|PNX58048.1| gag-pol polyprotein, partial [Trifolium pratense]      218   1e-66
dbj|GAU44722.1| hypothetical protein TSUD_88060 [Trifolium subte...   233   2e-66
dbj|GAU26664.1| hypothetical protein TSUD_314410 [Trifolium subt...   233   2e-66
dbj|GAU47765.1| hypothetical protein TSUD_193020 [Trifolium subt...   224   3e-66
dbj|GAU51998.1| hypothetical protein TSUD_418020 [Trifolium subt...   224   6e-66
dbj|GAU16784.1| hypothetical protein TSUD_200270 [Trifolium subt...   224   1e-65
dbj|GAU39457.1| hypothetical protein TSUD_290230 [Trifolium subt...   225   3e-65
gb|PNY07558.1| gag-pol polyprotein [Trifolium pratense]               228   5e-65
dbj|GAU48061.1| hypothetical protein TSUD_404890 [Trifolium subt...   222   7e-65
dbj|GAU45570.1| hypothetical protein TSUD_27710 [Trifolium subte...   226   1e-64

>gb|PNX98275.1| gag-pol polyprotein [Trifolium pratense]
          Length = 376

 Score =  236 bits (603), Expect = 4e-73
 Identities = 113/195 (57%), Positives = 145/195 (74%)
 Frame = -3

Query: 652 FTSVEHPQTNSQAEATNIVILRGLKRRLDDAKGTWAEELPYVLWAYRTIPHSTTKEAPFK 473
           FTSVEHPQTN QAE+ N VILRGLKRRL + K  W EEL  VLWAYRT PHSTT E PF+
Sbjct: 184 FTSVEHPQTNGQAESANRVILRGLKRRLVEGKNKWVEELWSVLWAYRTTPHSTTGETPFR 243

Query: 472 MVYGTGALIPVDIGELSWRTANPKPPQENDRAIKEELDLIDELCTKAALREALIKQGMAT 293
           + YGT A+IPV++ EL+WRT  P   +END AI+EELDL++EL T A+L EA +KQ +A 
Sbjct: 244 LTYGTEAVIPVEVEELTWRTRQPLSEEENDEAIREELDLVEELRTAASLHEASLKQKVAA 303

Query: 292 KHNAKLVPRDFSIGQLVLKRADIGHKNASQGKLAPNWEGPYRVVS*TGNGAYRLQTMSGG 113
           +HN K++ R+F +  LVL+R     K+++ GKLA NWEGPYR+ + T NGAY L+T+ G 
Sbjct: 304 RHNLKVIAREFDVDSLVLRR---NAKDSNHGKLAANWEGPYRIRAKTENGAYHLETLDGK 360

Query: 112 VIPRTWNLMNLRRYF 68
            +PRTWN   L++Y+
Sbjct: 361 QLPRTWNAKKLKQYY 375


>gb|PNX79719.1| retrotransposon-related protein, partial [Trifolium pratense]
          Length = 297

 Score =  231 bits (590), Expect = 4e-72
 Identities = 111/195 (56%), Positives = 143/195 (73%)
 Frame = -3

Query: 652 FTSVEHPQTNSQAEATNIVILRGLKRRLDDAKGTWAEELPYVLWAYRTIPHSTTKEAPFK 473
           FTSVEHPQTN QAE+ N VILRGLKRRL++ K  W EEL  VLWAYRT PHSTT E PF+
Sbjct: 105 FTSVEHPQTNGQAESANRVILRGLKRRLEEGKDKWVEELWSVLWAYRTTPHSTTGETPFR 164

Query: 472 MVYGTGALIPVDIGELSWRTANPKPPQENDRAIKEELDLIDELCTKAALREALIKQGMAT 293
           + YGT A+IPV++ EL+WRT  P   +EN+ AI+EELDLI+EL T A+LREA +KQ +A 
Sbjct: 165 LTYGTEAVIPVEVEELTWRTTQPLSNEENNEAIREELDLIEELRTAASLREASLKQKVAA 224

Query: 292 KHNAKLVPRDFSIGQLVLKRADIGHKNASQGKLAPNWEGPYRVVS*TGNGAYRLQTMSGG 113
           +HN K++ R+F +G LVL+R     K+   GKL  NWEGPYRV + T +G Y ++T+   
Sbjct: 225 RHNLKVINREFEVGSLVLRR---NAKDTHHGKLTANWEGPYRVRAKTDHGGYHIETLDRK 281

Query: 112 VIPRTWNLMNLRRYF 68
            +PRTWN   L++Y+
Sbjct: 282 QLPRTWNAKKLKQYY 296


>dbj|GAU30744.1| hypothetical protein TSUD_145410 [Trifolium subterraneum]
          Length = 696

 Score =  240 bits (612), Expect = 3e-71
 Identities = 117/195 (60%), Positives = 147/195 (75%)
 Frame = -3

Query: 652  FTSVEHPQTNSQAEATNIVILRGLKRRLDDAKGTWAEELPYVLWAYRTIPHSTTKEAPFK 473
            FTSVEHPQTN QAEA N VILRGL+RRL DAK  W EEL +VLWAYRT PHSTT E PF+
Sbjct: 504  FTSVEHPQTNGQAEAANRVILRGLRRRLGDAKKQWVEELSHVLWAYRTTPHSTTGETPFR 563

Query: 472  MVYGTGALIPVDIGELSWRTANPKPPQENDRAIKEELDLIDELCTKAALREALIKQGMAT 293
            + YGT A+IPV+IGE S RT  P   + ND A++EELDL++E+ T A+L+EA +KQ +A 
Sbjct: 564  LAYGTEAVIPVEIGEPSRRTEAPLDEEMNDEAMREELDLVEEIRTAASLKEASLKQLVAA 623

Query: 292  KHNAKLVPRDFSIGQLVLKRADIGHKNASQGKLAPNWEGPYRVVS*TGNGAYRLQTMSGG 113
            +H+ K++ RDF +G LVL+R     K++ +GKLA NWEGPYRV   T NGAY L+T+ G 
Sbjct: 624  RHDTKVIKRDFEVGSLVLRR---NAKDSHEGKLAANWEGPYRVRGKTDNGAYHLETLQGK 680

Query: 112  VIPRTWNLMNLRRYF 68
             IPRTWN  NL++Y+
Sbjct: 681  EIPRTWNAQNLKQYY 695


>gb|PNX81943.1| gag-pol polyprotein [Trifolium pratense]
          Length = 513

 Score =  235 bits (599), Expect = 6e-71
 Identities = 112/195 (57%), Positives = 146/195 (74%)
 Frame = -3

Query: 652 FTSVEHPQTNSQAEATNIVILRGLKRRLDDAKGTWAEELPYVLWAYRTIPHSTTKEAPFK 473
           FTSVEHPQTN QAEA N VILRGL+RRLD  K  W EEL  VLWAYRT PHSTT E PF+
Sbjct: 322 FTSVEHPQTNGQAEAANRVILRGLRRRLDQNKKKWVEELDNVLWAYRTTPHSTTGETPFR 381

Query: 472 MVYGTGALIPVDIGELSWRTANPKPPQENDRAIKEELDLIDELCTKAALREALIKQGMAT 293
           MVYGT A+IPV+IGE S RT  P   ++ND A+++ELDL++E+ T+A+L+EA +KQ +A 
Sbjct: 382 MVYGTEAVIPVEIGEPSRRTEQPLDEEQNDEALRQELDLVEEIRTRASLKEATLKQKIAA 441

Query: 292 KHNAKLVPRDFSIGQLVLKRADIGHKNASQGKLAPNWEGPYRVVS*TGNGAYRLQTMSGG 113
           +H+ K++ R+F +G LVL+R    + ++  GKLAPNWEGPYRV+  T NGAY L+ + G 
Sbjct: 442 RHDTKVIKREFEVGSLVLRR----NADSQGGKLAPNWEGPYRVIDKTENGAYYLEDLRGK 497

Query: 112 VIPRTWNLMNLRRYF 68
            +PR WN   L++Y+
Sbjct: 498 KLPRPWNAQKLKQYY 512


>dbj|GAU32026.1| hypothetical protein TSUD_147220 [Trifolium subterraneum]
          Length = 485

 Score =  233 bits (595), Expect = 1e-70
 Identities = 112/195 (57%), Positives = 143/195 (73%)
 Frame = -3

Query: 652 FTSVEHPQTNSQAEATNIVILRGLKRRLDDAKGTWAEELPYVLWAYRTIPHSTTKEAPFK 473
           F SVEHPQTN Q EA N VILRGL+RRL DAK  W EELP+VLWAYRT PHSTT E PF+
Sbjct: 293 FNSVEHPQTNGQVEAANRVILRGLRRRLGDAKKQWVEELPHVLWAYRTTPHSTTGETPFR 352

Query: 472 MVYGTGALIPVDIGELSWRTANPKPPQENDRAIKEELDLIDELCTKAALREALIKQGMAT 293
           + YGT A+IPV+IGE S RT  P   + ND A++EELDL++E+ T A+L+EA +KQ +A 
Sbjct: 353 LAYGTEAVIPVEIGEPSRRTEGPVDEEMNDEAMREELDLVEEIRTAASLKEASLKQLVAA 412

Query: 292 KHNAKLVPRDFSIGQLVLKRADIGHKNASQGKLAPNWEGPYRVVS*TGNGAYRLQTMSGG 113
           +H+ K++ RDF +G LVL+R     K++ +GKLA NWEGPYR+   T N  Y L+T+ G 
Sbjct: 413 RHDTKVIKRDFEVGSLVLRR---NAKDSHEGKLAANWEGPYRIRGKTDNDTYHLETLQGR 469

Query: 112 VIPRTWNLMNLRRYF 68
            IPRTWN   L++Y+
Sbjct: 470 EIPRTWNAQKLKQYY 484


>dbj|GAU20036.1| hypothetical protein TSUD_381280 [Trifolium subterraneum]
          Length = 2774

 Score =  240 bits (612), Expect = 5e-69
 Identities = 117/195 (60%), Positives = 147/195 (75%)
 Frame = -3

Query: 652  FTSVEHPQTNSQAEATNIVILRGLKRRLDDAKGTWAEELPYVLWAYRTIPHSTTKEAPFK 473
            FTSVEHPQTN QAEA N VILRGL+RRL DAK  W EELP+VLWAYRT PHSTT E PF+
Sbjct: 2582 FTSVEHPQTNGQAEAANRVILRGLRRRLGDAKKQWVEELPHVLWAYRTTPHSTTGETPFR 2641

Query: 472  MVYGTGALIPVDIGELSWRTANPKPPQENDRAIKEELDLIDELCTKAALREALIKQGMAT 293
            + YGT A+IPV+IGE S RT  P   + ND A++EELDL++E+ T A+L+EA +KQ +A 
Sbjct: 2642 LAYGTEAVIPVEIGEPSRRTEVPLDEEMNDEAMREELDLVEEIRTGASLKEASLKQLVAA 2701

Query: 292  KHNAKLVPRDFSIGQLVLKRADIGHKNASQGKLAPNWEGPYRVVS*TGNGAYRLQTMSGG 113
            +H+ K++ RDF +G LVL+R     K++ +GKLA NWEGPYRV   T NGAY L+T+ G 
Sbjct: 2702 RHDTKVIKRDFEVGSLVLRR---NAKDSHEGKLAANWEGPYRVRGKTDNGAYHLETLQGK 2758

Query: 112  VIPRTWNLMNLRRYF 68
             IPRTWN   L++Y+
Sbjct: 2759 EIPRTWNAQKLKQYY 2773


>dbj|GAU21179.1| hypothetical protein TSUD_10960 [Trifolium subterraneum]
          Length = 449

 Score =  226 bits (576), Expect = 3e-68
 Identities = 113/193 (58%), Positives = 143/193 (74%)
 Frame = -3

Query: 652 FTSVEHPQTNSQAEATNIVILRGLKRRLDDAKGTWAEELPYVLWAYRTIPHSTTKEAPFK 473
           FT VEHPQTN QAEA N VILRGL+RRL DAK  W EEL +VLWAYRT PHSTT E PF+
Sbjct: 222 FTFVEHPQTNGQAEAANRVILRGLRRRLGDAKKQWVEELSHVLWAYRTTPHSTTGETPFR 281

Query: 472 MVYGTGALIPVDIGELSWRTANPKPPQENDRAIKEELDLIDELCTKAALREALIKQGMAT 293
           + YGT A+IPV+IGE S RT  P   + ND A++EELDL++E+ T A+L+EA +KQ +A 
Sbjct: 282 LAYGTEAVIPVEIGEPSRRTEAPLDEEMNDEAMREELDLVEEIRTSASLKEASLKQRVAA 341

Query: 292 KHNAKLVPRDFSIGQLVLKRADIGHKNASQGKLAPNWEGPYRVVS*TGNGAYRLQTMSGG 113
           +H+ K++ RDF +G LVL+R     K++ +GKLA NWEGPYRV   T NGAY L+T+ G 
Sbjct: 342 RHDTKVIKRDFEVGSLVLRR---NAKDSHEGKLAANWEGPYRVRGKTDNGAYHLETLQGK 398

Query: 112 VIPRTWNLMNLRR 74
            IPRT +L+  +R
Sbjct: 399 EIPRTQHLLLKQR 411


>dbj|GAU41760.1| hypothetical protein TSUD_13610 [Trifolium subterraneum]
          Length = 955

 Score =  233 bits (595), Expect = 3e-67
 Identities = 117/203 (57%), Positives = 146/203 (71%), Gaps = 8/203 (3%)
 Frame = -3

Query: 652  FTSVEHPQTNSQAEATNIVILRGLKRRLDDAKGTWAEELPYVLWAYRTIPHSTTKEAPFK 473
            FTSVEHPQTN QAEA N VILRGL+RRL DAK  W EELP+VLWAYRT PHSTT E PF+
Sbjct: 755  FTSVEHPQTNGQAEAVNRVILRGLRRRLGDAKKQWVEELPHVLWAYRTTPHSTTGETPFR 814

Query: 472  MVYGTGALIPVDIGELSWRTANPKPPQENDR--------AIKEELDLIDELCTKAALREA 317
            + YGT A+IPV+IGE S RT  P   + ND         A++EELDL++E+ T A+L+EA
Sbjct: 815  LAYGTEAVIPVEIGEPSRRTEAPLDEEMNDEAMREELDLAMREELDLVEEIRTSASLKEA 874

Query: 316  LIKQGMATKHNAKLVPRDFSIGQLVLKRADIGHKNASQGKLAPNWEGPYRVVS*TGNGAY 137
             +KQ +A  H+ K++ RDF +G LVL+R     K++ +GKLA NWEGPYRV   T NGAY
Sbjct: 875  SLKQRVAAPHDTKVIKRDFEVGSLVLRR---NAKDSHEGKLAANWEGPYRVRGKTDNGAY 931

Query: 136  RLQTMSGGVIPRTWNLMNLRRYF 68
             L+T+ G  IPRTWN   L++Y+
Sbjct: 932  HLETLQGKEIPRTWNAQKLKQYY 954


>dbj|GAU34163.1| hypothetical protein TSUD_162630 [Trifolium subterraneum]
          Length = 1122

 Score =  234 bits (598), Expect = 3e-67
 Identities = 114/195 (58%), Positives = 144/195 (73%)
 Frame = -3

Query: 652  FTSVEHPQTNSQAEATNIVILRGLKRRLDDAKGTWAEELPYVLWAYRTIPHSTTKEAPFK 473
            FTSVEHPQTN QAEA N VILRGL+RRL DAK  W EELP+VLWAYRT PHSTT E PF+
Sbjct: 930  FTSVEHPQTNGQAEAANRVILRGLRRRLGDAKKQWVEELPHVLWAYRTTPHSTTGETPFR 989

Query: 472  MVYGTGALIPVDIGELSWRTANPKPPQENDRAIKEELDLIDELCTKAALREALIKQGMAT 293
            + YGT  +IPV+IGE S RT  P   + ND A++EELDL++E+ T A+L+E  +KQ +A 
Sbjct: 990  LAYGTETVIPVEIGEPSRRTEAPLDEEMNDEAMREELDLVEEIRTAASLKETSLKQLVAA 1049

Query: 292  KHNAKLVPRDFSIGQLVLKRADIGHKNASQGKLAPNWEGPYRVVS*TGNGAYRLQTMSGG 113
            +H+ K++ RDF +G LVL+R     K++ +GKLA NWEGPYRV   T NGAY L+T+ G 
Sbjct: 1050 RHDTKVIKRDFEVGSLVLRR---NAKDSHEGKLAANWEGPYRVRGKTDNGAYHLETLQGK 1106

Query: 112  VIPRTWNLMNLRRYF 68
             I RTWN   L++Y+
Sbjct: 1107 EISRTWNAQKLKQYY 1121


>dbj|GAU45489.1| hypothetical protein TSUD_191080 [Trifolium subterraneum]
          Length = 974

 Score =  233 bits (595), Expect = 3e-67
 Identities = 115/193 (59%), Positives = 142/193 (73%)
 Frame = -3

Query: 652  FTSVEHPQTNSQAEATNIVILRGLKRRLDDAKGTWAEELPYVLWAYRTIPHSTTKEAPFK 473
            FTSVEHPQTN QAE  N VIL GL+RRL DAK  W EELP+VLWAYRT PHSTTKE PF+
Sbjct: 741  FTSVEHPQTNGQAEVANRVILCGLRRRLGDAKKQWVEELPHVLWAYRTTPHSTTKETPFR 800

Query: 472  MVYGTGALIPVDIGELSWRTANPKPPQENDRAIKEELDLIDELCTKAALREALIKQGMAT 293
            + Y T A+IPV+IGE S RT  P   + ND  ++EELDL++E+ T A+L+EAL+KQ +AT
Sbjct: 801  LAYETEAVIPVEIGEPSRRTEAPLDEEMNDETMREELDLVEEIRTAASLKEALLKQPVAT 860

Query: 292  KHNAKLVPRDFSIGQLVLKRADIGHKNASQGKLAPNWEGPYRVVS*TGNGAYRLQTMSGG 113
            +H+ K++ RDF +G LVL+R     K++ +GKLA NWEGPYRV   T NGAY L+T+ G 
Sbjct: 861  RHDTKVIKRDFEVGSLVLRR---NAKDSHEGKLAANWEGPYRVRGKTDNGAYHLETLQGK 917

Query: 112  VIPRTWNLMNLRR 74
             IPRTWN     R
Sbjct: 918  EIPRTWNAQKAPR 930


>gb|PNX58048.1| gag-pol polyprotein, partial [Trifolium pratense]
          Length = 330

 Score =  218 bits (556), Expect = 1e-66
 Identities = 109/200 (54%), Positives = 142/200 (71%)
 Frame = -3

Query: 667 G*SSAFTSVEHPQTNSQAEATNIVILRGLKRRLDDAKGTWAEELPYVLWAYRTIPHSTTK 488
           G +  FTSVEHPQTN QAEA N VILRGLKRRLD+AKG W EEL  VLW+YRT PHSTT 
Sbjct: 133 GTTQHFTSVEHPQTNGQAEAANRVILRGLKRRLDEAKGKWTEELHSVLWSYRTTPHSTTG 192

Query: 487 EAPFKMVYGTGALIPVDIGELSWRTANPKPPQENDRAIKEELDLIDELCTKAALREALIK 308
           E PF++ Y T A+IPV+ G  S+RT  P    +N   ++EELDL++EL   AALREA +K
Sbjct: 193 ETPFRLTYRTEAVIPVETGASSFRTEIPLEGGDNQDMLREELDLLEELREGAALREATLK 252

Query: 307 QGMATKHNAKLVPRDFSIGQLVLKRADIGHKNASQGKLAPNWEGPYRVVS*TGNGAYRLQ 128
           Q +A +H+ +++ R+F +G LVL+R     K++ +GKLA NWEGPYRV + T N AY L+
Sbjct: 253 QKIAKRHDKRVIKREFDVGTLVLRR---NQKDSREGKLAANWEGPYRVQAKTENSAYYLE 309

Query: 127 TMSGGVIPRTWNLMNLRRYF 68
            + G  +PR WN   L++Y+
Sbjct: 310 DLYGKEVPRPWNAEKLKQYY 329


>dbj|GAU44722.1| hypothetical protein TSUD_88060 [Trifolium subterraneum]
          Length = 1768

 Score =  233 bits (594), Expect = 2e-66
 Identities = 115/193 (59%), Positives = 143/193 (74%)
 Frame = -3

Query: 652  FTSVEHPQTNSQAEATNIVILRGLKRRLDDAKGTWAEELPYVLWAYRTIPHSTTKEAPFK 473
            FTSVEHPQTN QAEA N VILRGL+R+L DAK  W EELP+VLWAYRT PHSTT E PF+
Sbjct: 1535 FTSVEHPQTNGQAEAANRVILRGLRRQLGDAKKQWVEELPHVLWAYRTTPHSTTGETPFR 1594

Query: 472  MVYGTGALIPVDIGELSWRTANPKPPQENDRAIKEELDLIDELCTKAALREALIKQGMAT 293
            + YGT A+IPV+IGE S RT  P   + ND A++EELDL++E+ T A+L+EA +KQ +A 
Sbjct: 1595 LAYGTEAVIPVEIGEPSRRTEAPLDEEINDEAMREELDLVEEIRTAASLKEASLKQLVAA 1654

Query: 292  KHNAKLVPRDFSIGQLVLKRADIGHKNASQGKLAPNWEGPYRVVS*TGNGAYRLQTMSGG 113
            +H+ K++ RDF +G LVL+R     K++ +GKLA NWEGPYRV   T NGAY L+T+ G 
Sbjct: 1655 RHDTKVIKRDFEVGSLVLRR---NAKDSHEGKLASNWEGPYRVRGKTDNGAYHLETLQGK 1711

Query: 112  VIPRTWNLMNLRR 74
             IPRTWN     R
Sbjct: 1712 EIPRTWNAQKAPR 1724


>dbj|GAU26664.1| hypothetical protein TSUD_314410 [Trifolium subterraneum]
          Length = 1412

 Score =  233 bits (593), Expect = 2e-66
 Identities = 114/187 (60%), Positives = 141/187 (75%)
 Frame = -3

Query: 652  FTSVEHPQTNSQAEATNIVILRGLKRRLDDAKGTWAEELPYVLWAYRTIPHSTTKEAPFK 473
            FTSVEHPQTN QAEA N VILRGL+RRL DAK  W EELP+VLWAYRT PHSTT E PF+
Sbjct: 1166 FTSVEHPQTNGQAEAANRVILRGLRRRLGDAKKQWVEELPHVLWAYRTTPHSTTGETPFR 1225

Query: 472  MVYGTGALIPVDIGELSWRTANPKPPQENDRAIKEELDLIDELCTKAALREALIKQGMAT 293
            + YGT A+IPV+IGE S RT  P   + ND A++EELDL++E+ T A+L+EA +KQ +A 
Sbjct: 1226 LAYGTEAVIPVEIGEPSRRTEAPLDEEMNDEAMREELDLVEEIRTSASLKEASLKQRVAA 1285

Query: 292  KHNAKLVPRDFSIGQLVLKRADIGHKNASQGKLAPNWEGPYRVVS*TGNGAYRLQTMSGG 113
            +H+ K++ RDF +G LVL+R     K++ +GKLA NWE PYRV   T NGAY L+T+ G 
Sbjct: 1286 RHDTKVIKRDFEVGSLVLRR---NAKDSHEGKLAANWEEPYRVRGKTDNGAYHLETLQGK 1342

Query: 112  VIPRTWN 92
             IPRTWN
Sbjct: 1343 EIPRTWN 1349


>dbj|GAU47765.1| hypothetical protein TSUD_193020 [Trifolium subterraneum]
          Length = 582

 Score =  224 bits (572), Expect = 3e-66
 Identities = 111/200 (55%), Positives = 143/200 (71%)
 Frame = -3

Query: 667 G*SSAFTSVEHPQTNSQAEATNIVILRGLKRRLDDAKGTWAEELPYVLWAYRTIPHSTTK 488
           G +  FTSVEHPQTN QAEA N VILRGL+RR+  +KG W EEL  VLW+YRT PHSTT 
Sbjct: 385 GTTQHFTSVEHPQTNGQAEAANRVILRGLRRRMGASKGNWTEELHNVLWSYRTTPHSTTG 444

Query: 487 EAPFKMVYGTGALIPVDIGELSWRTANPKPPQENDRAIKEELDLIDELCTKAALREALIK 308
           E PF++ YGT A+IPV+IGE S R   P     ND  ++EELDL++EL T A+LRE  +K
Sbjct: 445 ETPFRLTYGTEAVIPVEIGEPSSRIEYPPEEDINDEILREELDLVEELRTGASLREVTLK 504

Query: 307 QGMATKHNAKLVPRDFSIGQLVLKRADIGHKNASQGKLAPNWEGPYRVVS*TGNGAYRLQ 128
           Q +A +H+ K++ R+F +G LVL+R     K++ +GKLA NWEGPYRV + T NGAY L+
Sbjct: 505 QKIAAQHDKKVIKREFEVGSLVLRR---NQKDSREGKLAANWEGPYRVRAKTENGAYHLE 561

Query: 127 TMSGGVIPRTWNLMNLRRYF 68
            + G  IPRTWN   L++Y+
Sbjct: 562 DLYGKEIPRTWNAEKLKQYY 581


>dbj|GAU51998.1| hypothetical protein TSUD_418020 [Trifolium subterraneum]
          Length = 618

 Score =  224 bits (572), Expect = 6e-66
 Identities = 110/200 (55%), Positives = 144/200 (72%)
 Frame = -3

Query: 667  G*SSAFTSVEHPQTNSQAEATNIVILRGLKRRLDDAKGTWAEELPYVLWAYRTIPHSTTK 488
            G +  FTSVEHPQTN QAEA N V+LRGL+RR+  +KG W EEL  VLW+YRT PHSTT 
Sbjct: 421  GTTQHFTSVEHPQTNGQAEAANRVLLRGLRRRMGASKGNWTEELHNVLWSYRTTPHSTTG 480

Query: 487  EAPFKMVYGTGALIPVDIGELSWRTANPKPPQENDRAIKEELDLIDELCTKAALREALIK 308
            E PF++ YGT A+IPV+IGE S R   P     ND  ++EELDL++EL T A+LREA +K
Sbjct: 481  ETPFRLTYGTEAVIPVEIGEPSSRIEYPPREDMNDELLREELDLVEELRTGASLREATLK 540

Query: 307  QGMATKHNAKLVPRDFSIGQLVLKRADIGHKNASQGKLAPNWEGPYRVVS*TGNGAYRLQ 128
            Q +A +H+ +++ R+F +G LVL+R     K++ +GKLA NWEGPYRV + T NGAY L+
Sbjct: 541  QKIAARHDKRVIKREFEVGSLVLRR---NQKDSREGKLAANWEGPYRVRAKTENGAYHLE 597

Query: 127  TMSGGVIPRTWNLMNLRRYF 68
             + G  IPRTWN   L++Y+
Sbjct: 598  DLYGKEIPRTWNAEKLKQYY 617


>dbj|GAU16784.1| hypothetical protein TSUD_200270 [Trifolium subterraneum]
          Length = 649

 Score =  224 bits (572), Expect = 1e-65
 Identities = 110/200 (55%), Positives = 144/200 (72%)
 Frame = -3

Query: 667  G*SSAFTSVEHPQTNSQAEATNIVILRGLKRRLDDAKGTWAEELPYVLWAYRTIPHSTTK 488
            G +  FTSVEHPQTN QAEA N V+LRGL+RR+  +KG W EEL  VLW+YRT PHSTT 
Sbjct: 452  GTTQHFTSVEHPQTNGQAEAANRVLLRGLRRRMGASKGNWTEELHSVLWSYRTTPHSTTG 511

Query: 487  EAPFKMVYGTGALIPVDIGELSWRTANPKPPQENDRAIKEELDLIDELCTKAALREALIK 308
            E PF++ YGT A+IPV+IGE S R   P     ND  ++EELDL++EL T A+LREA +K
Sbjct: 512  ETPFRLTYGTEAVIPVEIGEPSSRIEYPPREDMNDELLREELDLVEELRTGASLREATLK 571

Query: 307  QGMATKHNAKLVPRDFSIGQLVLKRADIGHKNASQGKLAPNWEGPYRVVS*TGNGAYRLQ 128
            Q +A +H+ +++ R+F +G LVL+R     K++ +GKLA NWEGPYRV + T NGAY L+
Sbjct: 572  QKIAARHDKRVIKREFEVGSLVLRR---NQKDSREGKLAANWEGPYRVRAKTENGAYHLE 628

Query: 127  TMSGGVIPRTWNLMNLRRYF 68
             + G  IPRTWN   L++Y+
Sbjct: 629  DLYGKEIPRTWNAEKLKQYY 648


>dbj|GAU39457.1| hypothetical protein TSUD_290230 [Trifolium subterraneum]
          Length = 771

 Score =  225 bits (574), Expect = 3e-65
 Identities = 113/210 (53%), Positives = 148/210 (70%)
 Frame = -3

Query: 697  KIFKSS*LS*G*SSAFTSVEHPQTNSQAEATNIVILRGLKRRLDDAKGTWAEELPYVLWA 518
            K F+    S G +  FTSVEHPQTN QAEA N V+LRGL+RR+  +KG W EEL  VLW+
Sbjct: 487  KKFQEFLTSIGTTQHFTSVEHPQTNGQAEAANRVLLRGLRRRMGASKGNWTEELHSVLWS 546

Query: 517  YRTIPHSTTKEAPFKMVYGTGALIPVDIGELSWRTANPKPPQENDRAIKEELDLIDELCT 338
            YRT PHSTT E PF++ YGT A+IPV+IGE S R   P     ND  ++EELDL++EL T
Sbjct: 547  YRTTPHSTTGETPFRLTYGTEAVIPVEIGEPSSRIEYPPEKDINDELLREELDLVEELRT 606

Query: 337  KAALREALIKQGMATKHNAKLVPRDFSIGQLVLKRADIGHKNASQGKLAPNWEGPYRVVS 158
             A+LREA +KQ +A +H+ +++ R+F +G LVL+R     K++ +GKLA NWEGPYRV +
Sbjct: 607  GASLREATLKQKIAARHDKRVIKREFEVGSLVLRR---NQKDSREGKLAANWEGPYRVRA 663

Query: 157  *TGNGAYRLQTMSGGVIPRTWNLMNLRRYF 68
             T NGAY L+ + G  IPRTWN   L++Y+
Sbjct: 664  KTENGAYHLEDLYGKEIPRTWNAEKLKQYY 693


>gb|PNY07558.1| gag-pol polyprotein [Trifolium pratense]
          Length = 1019

 Score =  228 bits (580), Expect = 5e-65
 Identities = 112/210 (53%), Positives = 150/210 (71%)
 Frame = -3

Query: 697  KIFKSS*LS*G*SSAFTSVEHPQTNSQAEATNIVILRGLKRRLDDAKGTWAEELPYVLWA 518
            K F++  ++ G    FTSVEHPQTN QAEA N VILRGL+RRLD  K  W +EL  VLWA
Sbjct: 813  KDFQAFLVAIGTKQHFTSVEHPQTNGQAEAANRVILRGLRRRLDQNKAKWVDELDSVLWA 872

Query: 517  YRTIPHSTTKEAPFKMVYGTGALIPVDIGELSWRTANPKPPQENDRAIKEELDLIDELCT 338
            YRT PHSTT E PF++VYGT A+IPV+I E S RT  P   + ND A++EELDL++E+ T
Sbjct: 873  YRTTPHSTTGETPFRLVYGTEAVIPVEIAEPSRRTEQPLDEELNDEALREELDLVEEIRT 932

Query: 337  KAALREALIKQGMATKHNAKLVPRDFSIGQLVLKRADIGHKNASQGKLAPNWEGPYRVVS 158
             A+L+EA +KQ +A +H+ K++ R+F +G LVL+R    + ++  GKLAPNWEGPYRV+ 
Sbjct: 933  GASLKEAALKQKIAARHDTKVIKREFEVGSLVLRR----NADSRGGKLAPNWEGPYRVID 988

Query: 157  *TGNGAYRLQTMSGGVIPRTWNLMNLRRYF 68
             T +GAY L+ + G  +PR WN   L++Y+
Sbjct: 989  KTEHGAYYLEDLKGKKLPRPWNAQKLKQYY 1018


>dbj|GAU48061.1| hypothetical protein TSUD_404890 [Trifolium subterraneum]
          Length = 649

 Score =  222 bits (566), Expect = 7e-65
 Identities = 109/200 (54%), Positives = 142/200 (71%)
 Frame = -3

Query: 667  G*SSAFTSVEHPQTNSQAEATNIVILRGLKRRLDDAKGTWAEELPYVLWAYRTIPHSTTK 488
            G +  FTSVEHPQTN Q EA N V+LRGL+RR+  +KG W EEL  VLW+YRT PHSTT 
Sbjct: 452  GTTQHFTSVEHPQTNGQDEAANRVLLRGLRRRMSTSKGNWTEELHNVLWSYRTTPHSTTG 511

Query: 487  EAPFKMVYGTGALIPVDIGELSWRTANPKPPQENDRAIKEELDLIDELCTKAALREALIK 308
            E PF++ YGT A+IPV+IGE S R   P     ND  ++EELDL++EL T A+LREA +K
Sbjct: 512  ETPFRLTYGTEAVIPVEIGEPSSRIEYPLEEDINDELLREELDLVEELRTGASLREATLK 571

Query: 307  QGMATKHNAKLVPRDFSIGQLVLKRADIGHKNASQGKLAPNWEGPYRVVS*TGNGAYRLQ 128
            Q +A +H+ +++ R+F +G LVL+R     K++ +GKLA NWEGPYRV   T NGAY L+
Sbjct: 572  QKIAARHDKRVIKREFGVGSLVLRR---NQKDSREGKLAANWEGPYRVREKTENGAYHLE 628

Query: 127  TMSGGVIPRTWNLMNLRRYF 68
             + G  IPRTWN   L++Y+
Sbjct: 629  DLYGKEIPRTWNAEKLKQYY 648


>dbj|GAU45570.1| hypothetical protein TSUD_27710 [Trifolium subterraneum]
          Length = 944

 Score =  226 bits (576), Expect = 1e-64
 Identities = 110/200 (55%), Positives = 144/200 (72%)
 Frame = -3

Query: 667  G*SSAFTSVEHPQTNSQAEATNIVILRGLKRRLDDAKGTWAEELPYVLWAYRTIPHSTTK 488
            G +  FTSVEHPQTN QAE  N V+LRGL+RR+  +KG W EEL +VLW+YRT PHSTT 
Sbjct: 747  GTTQHFTSVEHPQTNGQAETANRVLLRGLRRRMGASKGNWTEELHHVLWSYRTTPHSTTG 806

Query: 487  EAPFKMVYGTGALIPVDIGELSWRTANPKPPQENDRAIKEELDLIDELCTKAALREALIK 308
            E PF++ YGT A+IPV+IGE S R   P     ND  ++EELDL++EL T A+LREA +K
Sbjct: 807  ETPFRLTYGTEAVIPVEIGEPSSRIEYPLEEDINDELLREELDLVEELRTGASLREATLK 866

Query: 307  QGMATKHNAKLVPRDFSIGQLVLKRADIGHKNASQGKLAPNWEGPYRVVS*TGNGAYRLQ 128
            Q +A +H+ +++ RDF +G LVL+R     K++ +GKLA NWEGPYRV + T NGAY L+
Sbjct: 867  QKIAARHDKRVIKRDFEVGSLVLRR---NQKDSQEGKLAANWEGPYRVRAKTENGAYHLE 923

Query: 127  TMSGGVIPRTWNLMNLRRYF 68
             + G  IPRTWN   L++Y+
Sbjct: 924  DLYGKEIPRTWNAEKLKQYY 943