BLASTX nr result
ID: Astragalus24_contig00016831
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus24_contig00016831
(748 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PNX71113.1| pantothenate synthetase [Trifolium pratense] 99 3e-21
gb|PNY01502.1| ribonuclease H [Trifolium pratense] 96 9e-19
gb|PNY05892.1| ribonuclease H [Trifolium pratense] 94 2e-18
gb|KHN04350.1| hypothetical protein glysoja_030944 [Glycine soja] 90 4e-18
gb|PNX85822.1| ribonuclease H, partial [Trifolium pratense] 87 4e-16
dbj|GAU42970.1| hypothetical protein TSUD_188430 [Trifolium subt... 86 3e-15
dbj|GAU29260.1| hypothetical protein TSUD_392100 [Trifolium subt... 81 5e-15
dbj|GAU37021.1| hypothetical protein TSUD_207270 [Trifolium subt... 83 2e-14
dbj|GAU09987.1| hypothetical protein TSUD_393040 [Trifolium subt... 83 3e-14
dbj|GAU51437.1| hypothetical protein TSUD_413370 [Trifolium subt... 80 2e-13
dbj|GAU29919.1| hypothetical protein TSUD_148280 [Trifolium subt... 77 4e-13
gb|PNX54946.1| ribonuclease H, partial [Trifolium pratense] 74 1e-12
gb|PNX66256.1| ribonuclease H [Trifolium pratense] 74 1e-12
dbj|GAU21431.1| hypothetical protein TSUD_32620 [Trifolium subte... 75 2e-12
gb|PNX78393.1| pantothenate synthetase [Trifolium pratense] 74 4e-12
dbj|GAU17119.1| hypothetical protein TSUD_106180 [Trifolium subt... 75 5e-12
gb|KHN41375.1| Putative ribonuclease H protein, partial [Glycine... 74 1e-11
dbj|GAU34179.1| hypothetical protein TSUD_162800 [Trifolium subt... 66 1e-11
gb|PNX86811.1| ribonuclease H [Trifolium pratense] 73 2e-11
dbj|GAU50693.1| hypothetical protein TSUD_410490 [Trifolium subt... 73 2e-11
>gb|PNX71113.1| pantothenate synthetase [Trifolium pratense]
Length = 255
Score = 99.0 bits (245), Expect = 3e-21
Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 4/230 (1%)
Frame = +2
Query: 5 RKI*QLEASVADFRHSEGVSDRWSWVPNPVEGFTVKFCYSTLIDLGDNMEITTDLRKVVK 184
++I +L+ +A F S DRW W+P+ F+VK CYS LI + T + +
Sbjct: 24 QQILELQGILAGFICSVSDPDRWWWLPDSNGLFSVKSCYSFLISSRQVTMLETTEAEALS 83
Query: 185 RLSACDFASKIRIFGWRSIHKRLATRDGLISQGIIAPYFNCCCPLCFEEDESVSRIFFQC 364
RL D SKI +FGWR + RL TR L +GI++ F C CF E + +FF C
Sbjct: 84 RLWKSDVPSKINVFGWRLLLNRLPTRMALHRRGILSNPFELSCVFCFWHREDGAHLFFSC 143
Query: 365 KI*LLHVWNHVAAWTGVCETPHIESF--YTTRWVLLQKREEDLVLNFVGCDLGYLGRKKR 538
+ VW +V W G+ +E + + +++ V + V + K R
Sbjct: 144 YFSKV-VWRNVLKWLGLSSPLDVEGIDHFLLFGEFFKVKDKGHVRHLVWLATTWNLWKMR 202
Query: 539 RGI*WSS--C*RGIHFNQLMVHSWQWFKERSGRHLSMSYTNWRSSPLSCL 682
+ + + + + + SW WF R GR++ +++W P+SC+
Sbjct: 203 NKVIFKGDIPDTAVLLDSIKLFSWIWFNGRYGRNVCCPFSSWCLDPISCI 252
>gb|PNY01502.1| ribonuclease H [Trifolium pratense]
Length = 554
Score = 95.5 bits (236), Expect = 9e-19
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 4/230 (1%)
Frame = +2
Query: 5 RKI*QLEASVADFRHSEGVSDRWSWVPNPVEGFTVKFCYSTLIDLGDNMEITTDLRKVVK 184
+++ +L+ +A F S+ DRW W+P+ F+VK YS L+ + T + +
Sbjct: 323 QQVLELQGLLAGFICSDSDPDRWWWLPDVNGMFSVKSFYSFLLSSRQVTILETTEAEALS 382
Query: 185 RLSACDFASKIRIFGWRSIHKRLATRDGLISQGIIAPYFNCCCPLCFEEDESVSRIFFQC 364
RL D SKI +FGWR + RL TR L +GI++ F C CF E + +FF C
Sbjct: 383 RLWKSDVPSKINVFGWRLLLNRLPTRMALHRRGILSNPFELSCVFCFRHREDGAHLFFSC 442
Query: 365 KI*LLHVWNHVAAWTGVCETPHIESF--YTTRWVLLQKREEDLVLNFVGCDLGYLGRKKR 538
+ VW +V W G+ +E + L + +++ V + V + K R
Sbjct: 443 YFSKV-VWRNVLKWLGLSIPMDVEGIDHFMLFGDLFKVKDKGRVRHLVWLATTWNLWKLR 501
Query: 539 RGI*WSS--C*RGIHFNQLMVHSWQWFKERSGRHLSMSYTNWRSSPLSCL 682
+ + + + + SW WF R GR++ +++W P+SC+
Sbjct: 502 NKVIFKGDIPETSALLDSIKLSSWMWFNGRYGRNVCCPFSSWCLDPMSCV 551
>gb|PNY05892.1| ribonuclease H [Trifolium pratense]
Length = 455
Score = 94.0 bits (232), Expect = 2e-18
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 6/216 (2%)
Frame = +2
Query: 53 EGVSDRWSWVPNPVEGFTVKFCYSTLIDLGDNMEITTDLRKVVKRLSACDFASKIRIFGW 232
E +D W W P+ F+VK YS L + EI T++ +++L D SK+ +FGW
Sbjct: 240 EDRTDNWKWKPDNSGMFSVKSAYSLLQNGRTVREINTNMITSLQQLWKNDIPSKVGVFGW 299
Query: 233 RSIHKRLATRDGLISQGIIAPYFNCCCPLCFEEDESVSRIFFQCKI*LLHVWNHVAAWTG 412
R + ++L TR L S+GI+ + CF E E +FF CK+ + VW + W G
Sbjct: 300 RLLLEKLPTRAALASRGILTNPHDLPRVFCFTEIEDCMHLFFNCKL-MQQVWRSIYKWLG 358
Query: 413 VCETPHIESFYTTRWV--LLQKREEDLVLNFVGCDLGYLGRKKRRGI*W----SSC*RGI 574
+ E + + +++ ++ + V + + + + R I + + C + +
Sbjct: 359 CAYYNYGEGWKHFNFFGGIVKSKKGEKVKHLIWLVTTWCIWRLRNNIIFRGALADCAQLV 418
Query: 575 HFNQLMVHSWQWFKERSGRHLSMSYTNWRSSPLSCL 682
+Q+ + SW WF RSGRH Y++W +PL C+
Sbjct: 419 --DQIKLISWVWFIGRSGRHCPYLYSDWCVNPLECI 452
>gb|KHN04350.1| hypothetical protein glysoja_030944 [Glycine soja]
Length = 229
Score = 90.1 bits (222), Expect = 4e-18
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 6/214 (2%)
Frame = +2
Query: 59 VSDRWSWVPNPVEGFTVKFCYSTLIDL--GDNMEITTDLRKVVKRLSACDFASKIRIFGW 232
V D W W + GFTVK CY+ L D G + + R + +L + SKI IF W
Sbjct: 14 VDDCWFWTLDAARGFTVKRCYAWLCDFFAGGRVVVADQQRAMWLKLWKNNAPSKILIFAW 73
Query: 233 RSIHKRLATRDGLISQGIIAPYFNCCCPLCFEEDESVSRIFFQCKI*LLHVWNHVAAW-- 406
R + ++ATRD L +G++ + C LC EDE+V IF C++ +W V W
Sbjct: 74 RVLINKIATRDALSRRGVLRDDADRRCVLCSSEDETVKHIFLDCRV-AKKIWQQVCLWLD 132
Query: 407 TGVCETPHIESFYTTRWVLLQKREEDLVLNFVGCDLGYLGRKKRRGI*W--SSC*RGIHF 580
V E I++ + L++ +++ V + + + + R + + + +
Sbjct: 133 VPVVEGEDIQAHFMAFGKLIKGKKQKRVKHLIWMAVIWNIWLTRNKVIFKEEAAAIPVMI 192
Query: 581 NQLMVHSWQWFKERSGRHLSMSYTNWRSSPLSCL 682
+ + +W WF R GR +++W + P+ CL
Sbjct: 193 SGIKDCAWAWFMARQGRTCWDGWSDWYNCPMGCL 226
>gb|PNX85822.1| ribonuclease H, partial [Trifolium pratense]
Length = 348
Score = 86.7 bits (213), Expect = 4e-16
Identities = 47/144 (32%), Positives = 72/144 (50%)
Frame = +2
Query: 5 RKI*QLEASVADFRHSEGVSDRWSWVPNPVEGFTVKFCYSTLIDLGDNMEITTDLRKVVK 184
+ I L+ A F SD+W W+P+ F+VK CYS L+ L + + + ++
Sbjct: 190 QSILDLQGLFAGFSLQLSNSDKWRWLPDVNGLFSVKSCYSCLLSLKQVVNLDAKVLDAIQ 249
Query: 185 RLSACDFASKIRIFGWRSIHKRLATRDGLISQGIIAPYFNCCCPLCFEEDESVSRIFFQC 364
RL D SKI+IFGWR + +L TR L +GI+ + C CF++ E + +FF C
Sbjct: 250 RLWGTDIPSKIKIFGWRLLLNKLPTRAALNRRGILTNPHDLPCAFCFQQIEDDTHLFFSC 309
Query: 365 KI*LLHVWNHVAAWTGVCETPHIE 436
+ VW +V W P +E
Sbjct: 310 RF-SKEVWRNVLLWLRHSFQPGVE 332
>dbj|GAU42970.1| hypothetical protein TSUD_188430 [Trifolium subterraneum]
Length = 767
Score = 85.5 bits (210), Expect = 3e-15
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 4/221 (1%)
Frame = +2
Query: 41 FRHSEGVSDRWSWVPNPVEGFTVKFCYSTLIDLGDNMEITTDLRKVVKRLSACDFASKIR 220
F G++D W W+P+ ++VK CY+TL+ +++ ++ + L + SK+
Sbjct: 547 FSLQPGITDHWRWIPDTNGLYSVKSCYNTLLCSRQLVDLDQNVLNAINLLWKKEIPSKVL 606
Query: 221 IFGWRSIHKRLATRDGLISQGIIAPYFNCCCPLCFEEDESVSRIFFQCKI*LLHVWNHVA 400
IF WR + +RL TR L +GII + C C DE + +FF C + L VW V
Sbjct: 607 IFAWRLLLERLPTRTALHRRGIILNPQDLHCVFCSSYDEDSAHLFFHCSV-LKRVWEEVF 665
Query: 401 AWTGVCETPHIESF--YTTRWVLLQKREEDLVLNFVGCDLGYLGRKKRRGI*WS--SC*R 568
W G + + + LL+ + + V + + + K R + ++ +
Sbjct: 666 KWFGKSYQAEADGWNHFNIFGSLLKTKRFEKVRHLIWLATTWSIWKLRNNVVFNGVTLSS 725
Query: 569 GIHFNQLMVHSWQWFKERSGRHLSMSYTNWRSSPLSCLNMI 691
N + S W R G S+S+ +W P++C I
Sbjct: 726 SSLVNDIKTISCLWLSGRYGHISSISFPDWCFDPMTCFQSI 766
>dbj|GAU29260.1| hypothetical protein TSUD_392100 [Trifolium subterraneum]
Length = 202
Score = 81.3 bits (199), Expect = 5e-15
Identities = 43/133 (32%), Positives = 65/133 (48%)
Frame = +2
Query: 17 QLEASVADFRHSEGVSDRWSWVPNPVEGFTVKFCYSTLIDLGDNMEITTDLRKVVKRLSA 196
+L + F S D W WV F+VK CY LID + E+ ++ +K+L
Sbjct: 28 ELNELLVSFSLSPNNPDSWRWVLGKTGLFSVKSCYDWLIDHKQHEELNFNVLSAIKQLWK 87
Query: 197 CDFASKIRIFGWRSIHKRLATRDGLISQGIIAPYFNCCCPLCFEEDESVSRIFFQCKI*L 376
D SK+ +FGWR + RL T++ L +GI+ + C C + E + +FF C I +
Sbjct: 88 NDVPSKVLVFGWRFLLDRLPTKEALNDRGILLNLHDLSCNFCLQHFEDSNHLFFLC-IFI 146
Query: 377 LHVWNHVAAWTGV 415
VW V W G+
Sbjct: 147 KRVWEEVYKWIGM 159
>dbj|GAU37021.1| hypothetical protein TSUD_207270 [Trifolium subterraneum]
Length = 596
Score = 82.8 bits (203), Expect = 2e-14
Identities = 39/132 (29%), Positives = 69/132 (52%)
Frame = +2
Query: 17 QLEASVADFRHSEGVSDRWSWVPNPVEGFTVKFCYSTLIDLGDNMEITTDLRKVVKRLSA 196
+L+ + F + DRW W+P+ V FT+K CY+ LI +G+ + ++ L +++L
Sbjct: 442 ELQVLLTGFSLNPTCCDRWKWIPDSVGDFTIKSCYNVLIHVGNTVVLSPHLLVAIRKLWK 501
Query: 197 CDFASKIRIFGWRSIHKRLATRDGLISQGIIAPYFNCCCPLCFEEDESVSRIFFQCKI*L 376
D SK+ IFGWR + ++L TR L + I+ C C E + +FF ++ +
Sbjct: 502 NDLPSKVGIFGWRLLLEKLPTRAALAHRNILNTDDELLCVFCSRVREDSNHLFFN-RVHM 560
Query: 377 LHVWNHVAAWTG 412
++W + W G
Sbjct: 561 KYLWRRIHDWLG 572
>dbj|GAU09987.1| hypothetical protein TSUD_393040 [Trifolium subterraneum]
Length = 1815
Score = 82.8 bits (203), Expect = 3e-14
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 5/213 (2%)
Frame = +2
Query: 59 VSDRWSWVPNPVEGFTVKFCYSTLIDLGDNMEITTDLRKVV-KRLSACDFASKIRIFGWR 235
V DRW W+ + + GFTVK + L + N I + + V KRL C SK+R FGW+
Sbjct: 1604 VGDRWLWLGDGILGFTVKSAFLRLESMVANSRILEPVEEFVFKRLWKCAVPSKVRAFGWQ 1663
Query: 236 SIHKRLATRDGLISQGIIAPYFNCCCPLCFEEDESVSRIFFQCKI*LLHVWNHVAAWTG- 412
+ R+ T+D L+ + ++ C C + E+ +F C+ + VW + W G
Sbjct: 1664 LLLNRIQTKDNLVKRNLLQTDQQLCV-FCGRKTETAVHLFLHCEW-VAKVWYSITGWLGF 1721
Query: 413 -VCETPHIESFYTTRWVLLQKREEDLVLNFVGCDLGYLGRKKRRGI*WSSC*RGIH--FN 583
+ P++ + + + +++ L + ++ K+R + +++ +
Sbjct: 1722 SLIIPPNLSTSFAMWATCVNIKKQKSGLCLIWNAFMWMVWKRRNDLVFNNVAASVDELVE 1781
Query: 584 QLMVHSWQWFKERSGRHLSMSYTNWRSSPLSCL 682
Q+ + SWQWF R + + Y W+ SP+ C+
Sbjct: 1782 QIQLVSWQWFIGRMAKGPCLLY-EWKWSPIDCM 1813
>dbj|GAU51437.1| hypothetical protein TSUD_413370 [Trifolium subterraneum]
Length = 735
Score = 80.1 bits (196), Expect = 2e-13
Identities = 62/228 (27%), Positives = 99/228 (43%), Gaps = 18/228 (7%)
Frame = +2
Query: 62 SDRWSWVPNPVEGFTVKFCYSTLIDLGDNMEITTDLRKVVKRLSACDFASKIRIFGWRSI 241
SDRW W P+P+EG+TV+ Y L + TTD +V K+ IF WR +
Sbjct: 530 SDRWQWQPDPIEGYTVRGAYQLLTS---QVSATTDAENLVWHPQV---PLKVSIFAWRLL 583
Query: 242 HKRLATRDGLISQGIIAPYFNCCCPLCFEEDESVSRIFFQCKI*LLHVWNHVAAWTGVCE 421
RL T+ L+++GII+P + C C ES +F C +W V +W +
Sbjct: 584 RDRLPTKTNLVTRGIISPAVHSCVSGC-GAAESTHHLFISCST-FGSLWALVCSW---ID 638
Query: 422 TPHIESFYTTRWVLLQKREEDLVLNFVGCDLGYLGRKKRRGI*WSSC*RGIH-------- 577
+ES T+ W D + FV G R+ + W +C +
Sbjct: 639 MTSVES--TSLW--------DHFVQFVSSAGGSRARRSFLQLIWLACVWVVWTERNHRLF 688
Query: 578 ----------FNQLMVHSWQWFKERSGRHLSMSYTNWRSSPLSCLNMI 691
+++ + +++W K S LS +Y +W SSPL C+ ++
Sbjct: 689 RGPASSSQQLLDKIKLFTFRWLKTTSATLLS-NYHSWWSSPLLCMGLV 735
>dbj|GAU29919.1| hypothetical protein TSUD_148280 [Trifolium subterraneum]
Length = 225
Score = 76.6 bits (187), Expect = 4e-13
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 5/215 (2%)
Frame = +2
Query: 62 SDRWSWVPNPVEGFTVKFCYSTLIDLGDNMEITTDLRKVVKRLSACDFASKIRIFGWRSI 241
SDRW W P+P EG+TV+ Y + ++ + L K + K+ I WR +
Sbjct: 19 SDRWQWQPDPDEGYTVQGAYQLMTS-----QVPSTLDDADKLIWHTRVPLKVSILAWRLL 73
Query: 242 HKRLATRDGLISQGIIAPYFNCCCPLCFEEDESVSRIFFQCKI*LLHVWNHVAAWTGVC- 418
RL TR L+++GI+AP + C C E ES +F C +W + +W G+
Sbjct: 74 RDRLPTRVNLVTRGILAPAAHFCVSGC-GEAESAHHLFISCST-FGSLWTLLCSWIGIAP 131
Query: 419 --ETPHIESF--YTTRWVLLQKREEDLVLNFVGCDLGYLGRKKRRGI*WSSC*RGIHFNQ 586
T E F +T + R + L ++ C + R S ++
Sbjct: 132 VYSTSIREHFVQFTCAAGGARARRSFMQLIWLVCVWVVWTERNHRLFRGSENSSIQMLDK 191
Query: 587 LMVHSWQWFKERSGRHLSMSYTNWRSSPLSCLNMI 691
+ + S++W K S L+ +Y +W SSPL CL +I
Sbjct: 192 IKIFSFRWLKSTSVT-LASNYHSWWSSPLLCLGLI 225
>gb|PNX54946.1| ribonuclease H, partial [Trifolium pratense]
Length = 163
Score = 73.9 bits (180), Expect = 1e-12
Identities = 43/123 (34%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Frame = +2
Query: 44 RHSEGVSDRWSWVPNPVEGFTVKFCYSTLIDLGDNMEITTDLRKVVKRLSACDFASKIRI 223
R S DR W+PN FTVK Y L + EI + V+K L + SK+ I
Sbjct: 22 RLSNDSRDRRKWMPNTAGFFTVKSAYVQLPNRCALEEIDSFTANVLKSLWKNNVPSKVSI 81
Query: 224 FGWRSIHKRLATRDGLISQGIIAPYFNCCCPLCF--EEDESVSRIFFQCKI*LLHVWNHV 397
FGWR + ++L TR L S+G++ C LCF EE+E +F C + +WN++
Sbjct: 82 FGWRLLLEKLPTRKDLFSKGVVTNNSERSCVLCFKEEEEEDTHHVFVNCCV-ATQIWNYI 140
Query: 398 AAW 406
W
Sbjct: 141 FRW 143
>gb|PNX66256.1| ribonuclease H [Trifolium pratense]
Length = 175
Score = 73.9 bits (180), Expect = 1e-12
Identities = 38/117 (32%), Positives = 58/117 (49%)
Frame = +2
Query: 65 DRWSWVPNPVEGFTVKFCYSTLIDLGDNMEITTDLRKVVKRLSACDFASKIRIFGWRSIH 244
DRW W+ F+VK Y +L + + DL + + L D SK+ +FGWR +
Sbjct: 2 DRWRWISETTGLFSVKSAYCSLQNHFEPPSADPDLLEALHTLWKNDIPSKVGVFGWRLLL 61
Query: 245 KRLATRDGLISQGIIAPYFNCCCPLCFEEDESVSRIFFQCKI*LLHVWNHVAAWTGV 415
+L TR L S+GI+ + C CF+ E+ +FF C ++ +W V W GV
Sbjct: 62 DKLPTRAALASKGILVNSHDLSCVFCFQAVENCHHLFFSCDK-VIELWKQVFLWMGV 117
>dbj|GAU21431.1| hypothetical protein TSUD_32620 [Trifolium subterraneum]
Length = 272
Score = 75.5 bits (184), Expect = 2e-12
Identities = 58/216 (26%), Positives = 94/216 (43%), Gaps = 6/216 (2%)
Frame = +2
Query: 62 SDRWSWVPNPVEGFTVKFCYSTLIDLGDNMEITTDLRKVVKRLSACDFASKIRIFGWRSI 241
SDRW W P+P EG+TV+ Y L ++ + L K + K+ I WR +
Sbjct: 66 SDRWQWQPDPDEGYTVQGAYQLLTS-----QVPSTLDDADKLIWHTRVPLKVSILAWRLL 120
Query: 242 HKRLATRDGLISQGIIAPYFNCCCPLCFEEDESVSRIFFQCKI*LLHVWNHVAAWTGVCE 421
RL TR L+++GI+AP + C C E ES +F C +W + +W G+
Sbjct: 121 RDRLPTRVNLVTRGILAPAAHFCVSGC-GEAESAHHLFISCST-FGSLWTLLCSWIGIAP 178
Query: 422 TPHIESF------YTTRWVLLQKREEDLVLNFVGCDLGYLGRKKRRGI*WSSC*RGIHFN 583
H S +T + R + L ++ C + R S +
Sbjct: 179 V-HSTSIRDHFVQFTCAAGGARARRSFMQLIWLVCVWVVWTERNHRLFRGSESSSIQMLD 237
Query: 584 QLMVHSWQWFKERSGRHLSMSYTNWRSSPLSCLNMI 691
++ + S++W K S L+ +Y +W SSP CL ++
Sbjct: 238 KIKIFSFRWLKSTSVT-LASNYHSWWSSPFLCLGLV 272
>gb|PNX78393.1| pantothenate synthetase [Trifolium pratense]
Length = 258
Score = 74.3 bits (181), Expect = 4e-12
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 5/211 (2%)
Frame = +2
Query: 65 DRWSWVPNPVEGFTVKFCYSTLIDLGDNMEITTDLRK-VVKRLSACDFASKIRIFGWRSI 241
DRW W+ + ++GFTVK Y L ++ + I + K KRL C SK R F W+ +
Sbjct: 49 DRWLWLDDGIQGFTVKSAYVLLENMVPSTRILQPVEKFAFKRLWKCASPSKTRAFVWQLL 108
Query: 242 HKRLATRDGLISQGIIAPYFNCCCPLCFEEDESVSRIFFQCKI*LLHVWNHVAAWTG--V 415
R+ T+D L+ + ++ + C LC ++ E+ +F C VW + W G +
Sbjct: 109 LNRVPTKDNLLKRRML-QHDQQNCVLCGQKIETAVHLFLHCDY-TAKVWYGLTTWLGFSL 166
Query: 416 CETPHIESFYTTRWVLLQKREEDLVLNFVGCDLGYLGRKKRRGI*WSSC*RGIH--FNQL 589
P+I + + K+ E + + + K+R +++ + Q+
Sbjct: 167 MIPPNIVTSFAMWTTCGNKKFEKAGMCLIWNAFMWALWKRRNDCLFNNTIVNVDEMVEQI 226
Query: 590 MVHSWQWFKERSGRHLSMSYTNWRSSPLSCL 682
V SWQWF R + + Y W+ SP+ C+
Sbjct: 227 KVLSWQWFIGRMAKGPCLLY-EWKWSPIDCM 256
>dbj|GAU17119.1| hypothetical protein TSUD_106180 [Trifolium subterraneum]
Length = 300
Score = 74.7 bits (182), Expect = 5e-12
Identities = 39/116 (33%), Positives = 58/116 (50%)
Frame = +2
Query: 65 DRWSWVPNPVEGFTVKFCYSTLIDLGDNMEITTDLRKVVKRLSACDFASKIRIFGWRSIH 244
D+W W+ + FTVK Y+ L+DL + +V++R D SK+ +FGWR +
Sbjct: 146 DQWRWILDSNGLFTVKSSYTNLLDLRQVELQDAHVLEVIQRQRKSDVPSKVYVFGWRLLL 205
Query: 245 KRLATRDGLISQGIIAPYFNCCCPLCFEEDESVSRIFFQCKI*LLHVWNHVAAWTG 412
RL TR L +GI+ + C CF++ E +FF C VWN +W G
Sbjct: 206 NRLPTRAVLHHRGILTNHHELSCIFCFQQAEDEKHLFFSCPF-SKKVWNKDLSWLG 260
>gb|KHN41375.1| Putative ribonuclease H protein, partial [Glycine soja]
Length = 363
Score = 74.3 bits (181), Expect = 1e-11
Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 5/225 (2%)
Frame = +2
Query: 20 LEASVADFRHSEGVSDRWSWVPNPVEGFTVKFCYSTLIDLGDNMEITTDLRKVVKRLSAC 199
LE + D DRW W + + FTV CYS + L + ++ +D+ ++ +
Sbjct: 142 LETILVDVHLVAESHDRWKWSLHNSKLFTVSSCYSFAMSLVNQTQMNSDILDILSIVWKV 201
Query: 200 DFASKIRIFGWRSIHKRLATRDGLISQGIIAPYFNCCCPLCFEEDESVSRIFFQCKI*LL 379
SK+ +F WR + RL T+D LI + ++ N C LC DE+V +FF C
Sbjct: 202 PVPSKVALFCWRLLLDRLPTKDNLIRRNVVIN--NSRCSLCDSCDENVVHLFFHCDF-SK 258
Query: 380 HVWNHVAAWTGVCE---TPHIESFYTTRWVLLQKREEDLVLNFVGCDLGYLGRKKRRGI* 550
+W + +W G+ + ++ F+ +L + V ++ + R
Sbjct: 259 CIWKEILSWIGIVDVIAVGGVQHFWEYDRLLKYNTSRNKVPFMFWLATLWIIWQVRNNSI 318
Query: 551 WSSC*RGI--HFNQLMVHSWQWFKERSGRHLSMSYTNWRSSPLSC 679
+ + I NQ+ W WF + G + ++W +SP C
Sbjct: 319 FKEEEKDIPKTINQIKHICWAWFMGKVGGVGGSNISDWWNSPFLC 363
>dbj|GAU34179.1| hypothetical protein TSUD_162800 [Trifolium subterraneum]
Length = 757
Score = 65.9 bits (159), Expect(2) = 1e-11
Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
Frame = +2
Query: 65 DRWSWVPNPVEGFTVKFCYSTLIDLGDNMEITTDLR----KVVKRLSACDFASKIRIFGW 232
D+W W +P F+VK Y +L++ N++ + +L K+ + K+ +F W
Sbjct: 547 DKWHWALDPDGCFSVKSAYDSLLE---NLDTSPNLSPYEAKIFSNIWDSPAPLKVVVFSW 603
Query: 233 RSIHKRLATRDGLISQGIIAPYFNCCCPLCFEEDESVSRIFFQCKI*LLHVWNHVAAWTG 412
R +H R+ T++ LI +G++ + C C + ES + +F CK+ L+ VW + W G
Sbjct: 604 RLLHDRVPTKENLIVRGVLPRESSGSCVWCGDIRESSAHLFLHCKVALV-VWYEIFRWLG 662
Query: 413 V 415
V
Sbjct: 663 V 663
Score = 32.3 bits (72), Expect(2) = 1e-11
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 468 RKEKKIWCLILLDVTWVIWGGRNDVVFNGLAVD 566
+K KK + L+ V W IW RN+ +FN + D
Sbjct: 685 KKSKKGFLLVWHSVIWTIWKARNNQIFNNVTSD 717
>gb|PNX86811.1| ribonuclease H [Trifolium pratense]
Length = 286
Score = 73.2 bits (178), Expect = 2e-11
Identities = 38/115 (33%), Positives = 57/115 (49%)
Frame = +2
Query: 17 QLEASVADFRHSEGVSDRWSWVPNPVEGFTVKFCYSTLIDLGDNMEITTDLRKVVKRLSA 196
+L+ + D + +DRW W+ F+V Y+ L+ LG +I + L K L
Sbjct: 157 KLKELLLDVNLNPNSADRWRWIIGSAGSFSVNSYYNFLVQLGAVEDINSSLLLAFKNLWK 216
Query: 197 CDFASKIRIFGWRSIHKRLATRDGLISQGIIAPYFNCCCPLCFEEDESVSRIFFQ 361
D K+ +FGWR + ++L TR L+S+GII C CF ES S +F Q
Sbjct: 217 NDVPLKVSVFGWRLLLQKLPTRAALVSKGIITNPHESSCAFCFRHVESCSHLFLQ 271
>dbj|GAU50693.1| hypothetical protein TSUD_410490 [Trifolium subterraneum]
Length = 262
Score = 72.8 bits (177), Expect = 2e-11
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 5/212 (2%)
Frame = +2
Query: 62 SDRWSWVPNPVEGFTVKFCYSTLIDLGDNMEITTDLRKVV-KRLSACDFASKIRIFGWRS 238
+DRW W+ + +GFTVK Y + ++ I +++ V KRL C SK+R F W+
Sbjct: 52 ADRWLWLGDGTQGFTVKSAYLRMENMVTIRRILEPVQEFVFKRLWKCAVPSKVRAFVWQM 111
Query: 239 IHKRLATRDGLISQGIIAPYFNCCCPLCFEEDESVSRIFFQCKI*LLHVWNHVAAWTGVC 418
+ R+ T++ L + I+ C C + E+V +F C + VW + W G C
Sbjct: 112 LLDRVQTKENLFKRKILQADQQLCLS-CGVKTENVVHLFLHCDW-VAKVWYKIMGWLGFC 169
Query: 419 --ETPHIESFYTTRWVLLQKREEDLVLNFVGCDLGYLGRKKRRGI*WSSC*RGIH--FNQ 586
++ + + ++E L + + K+R + +++ + +Q
Sbjct: 170 LIIPSNLATSFAMWATCSTNKKEKAGLCLIWNAFMWTVWKRRNDLVFNNVAASVEEVVDQ 229
Query: 587 LMVHSWQWFKERSGRHLSMSYTNWRSSPLSCL 682
+ SWQWF R + + Y W SP+ C+
Sbjct: 230 IQAVSWQWFIGRMAKGPCLLY-EWNWSPMDCM 260