BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00016717
         (396 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX75059.1| ribonuclease H [Trifolium pratense]                     55   4e-06
gb|PNX88909.1| ribonuclease H, partial [Trifolium pratense]            52   5e-06
dbj|GAU35983.1| hypothetical protein TSUD_207870 [Trifolium subt...    53   7e-06

>gb|PNX75059.1| ribonuclease H [Trifolium pratense]
          Length = 362

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 23/45 (51%), Positives = 29/45 (64%)
 Frame = -3

Query: 163 WEVCFVSIFRETNRCADALTNIGCRQSDDLNVYERCPTSV*LLLL 29
           WE+     +RE N CADAL N+GC     L +Y+ CPTS+ LLLL
Sbjct: 304 WEIKVCHCYREANACADALANMGCEHGPGLRIYDNCPTSLSLLLL 348


>gb|PNX88909.1| ribonuclease H, partial [Trifolium pratense]
          Length = 90

 Score = 51.6 bits (122), Expect = 5e-06
 Identities = 24/54 (44%), Positives = 31/54 (57%)
 Frame = -3

Query: 163 WEVCFVSIFRETNRCADALTNIGCRQSDDLNVYERCPTSV*LLLLFNAVENFIP 2
           WEV     +R+ N CADAL N+GC     L VYE+CP SV  L+L + +    P
Sbjct: 32  WEVNICYSYRKANDCADALANLGCNHDPGLRVYEQCPPSVSSLMLADVMGIITP 85


>dbj|GAU35983.1| hypothetical protein TSUD_207870 [Trifolium subterraneum]
          Length = 159

 Score = 52.8 bits (125), Expect = 7e-06
 Identities = 23/45 (51%), Positives = 29/45 (64%)
 Frame = -3

Query: 163 WEVCFVSIFRETNRCADALTNIGCRQSDDLNVYERCPTSV*LLLL 29
           WEV     +RE+N C DAL N+GC     + VYE+CPTS+  LLL
Sbjct: 101 WEVRICHSYRESNACVDALANLGCDHEPGMRVYEQCPTSLSSLLL 145