BLASTX nr result

ID: Astragalus24_contig00016643 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00016643
         (532 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004500736.1| PREDICTED: translocase of chloroplast 120, c...    85   9e-16
ref|XP_003594564.1| translocon outer complex protein [Medicago t...    56   6e-06

>ref|XP_004500736.1| PREDICTED: translocase of chloroplast 120, chloroplastic [Cicer
           arietinum]
          Length = 1227

 Score = 84.7 bits (208), Expect = 9e-16
 Identities = 48/95 (50%), Positives = 57/95 (60%)
 Frame = +2

Query: 248 MDNXXXXXXXXXXXXRKRLDIGVSKERMPESNKLKDLXXXXXXXXAMDPQEHFHYLGDVV 427
           MDN            RKR+D GVS E    SN+LK+L        A+DP +HF+ L D V
Sbjct: 1   MDNNAVVFDGYGEGERKRVDFGVSNESKGGSNELKNLEGDEVFEEAIDPLKHFNDLEDTV 60

Query: 428 LANGNDAAVVSALPSTLVDEIADDAEEPDNFEEAI 532
           +  G+  A V+ALPSTLVDEI D AEE DNFEEAI
Sbjct: 61  VGQGDVDATVTALPSTLVDEIPDTAEELDNFEEAI 95


>ref|XP_003594564.1| translocon outer complex protein [Medicago truncatula]
 gb|AES64815.1| translocon outer complex protein [Medicago truncatula]
          Length = 1338

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
 Frame = +2

Query: 293 RKRLDIGVSKERMPESNKLKDLXXXXXXXXAMDPQEHFHYLGDVVLAN-----GNDAAVV 457
           ++R D+GV +E +  SN++K+L        A+DP +HF   G   + +      + AA V
Sbjct: 7   KERGDVGVVEESVVGSNEVKNLEGEEVFEEAIDPLKHFDNQGAGAVGSLPSDLVDVAATV 66

Query: 458 SALPSTLVDEIADDAEEPDNFEEAI 532
           S+LPS  VDEI D+ EE DNF E++
Sbjct: 67  SSLPSDSVDEIGDNVEELDNFHESV 91


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