BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00016192
         (530 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposo...   175   2e-47
ref|XP_014632953.1| PREDICTED: uncharacterized protein LOC102666...   112   2e-25
gb|PNY02430.1| retrovirus-related Pol polyprotein from transposo...    91   6e-18
gb|PNX93770.1| histone deacetylase [Trifolium pratense]                88   5e-17
gb|KYP68392.1| Retrovirus-related Pol polyprotein from transposo...    87   1e-16
dbj|GAU30708.1| hypothetical protein TSUD_39320 [Trifolium subte...    87   1e-16
dbj|GAU28846.1| hypothetical protein TSUD_21830 [Trifolium subte...    87   1e-16
gb|PNX79340.1| retrovirus-related Pol polyprotein from transposo...    87   2e-16
gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposo...    85   6e-16
gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposo...    85   6e-16
gb|PNX84343.1| retrovirus-related Pol polyprotein from transposo...    85   7e-16
gb|KYP68420.1| Retrovirus-related Pol polyprotein from transposo...    85   8e-16
gb|PNX92752.1| histone deacetylase [Trifolium pratense]                85   9e-16
dbj|GAU29238.1| hypothetical protein TSUD_362280 [Trifolium subt...    84   1e-15
gb|KYP34307.1| Retrovirus-related Pol polyprotein from transposo...    84   2e-15
dbj|GAU19342.1| hypothetical protein TSUD_336290 [Trifolium subt...    84   2e-15
gb|PNY12956.1| retrovirus-related Pol polyprotein from transposo...    83   4e-15
gb|PNX93512.1| histone deacetylase, partial [Trifolium pratense]       83   4e-15
gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposo...    82   5e-15
gb|PNY05793.1| histone deacetylase [Trifolium pratense]                82   7e-15

>gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 1429

 Score =  175 bits (444), Expect = 2e-47
 Identities = 93/169 (55%), Positives = 107/169 (63%), Gaps = 10/169 (5%)
 Frame = +3

Query: 54  VQCQVCHRPSHDASYCYHRFNXXXXXXXXXXXXXXXXXXXIRPPAANN--TT*PQGTMIV 227
           VQCQVCHR  HDASYCYHRFN                      P  NN   + PQ     
Sbjct: 282 VQCQVCHRTGHDASYCYHRFNAAYGSNQPYVHGNPYQYVRNTTPNNNNWAQSNPQWQQ-A 340

Query: 228 APKANFTGT--------HAQHPTGNNFMDTVATNHVTSMHATPGSTPPPSHLENIFLGNG 383
           AP+ANFTG         +A HPT NN +DT AT HVT M   PGS PPPSHLE+IFLGNG
Sbjct: 341 APQANFTGYAPQTNFTGYAMHPTMNNNLDTAATQHVTLMQPPPGSAPPPSHLEHIFLGNG 400

Query: 384 QGHSIQSLGSFSFPSPTHPNNTLYLNNVLHVLAINKNLISFSKFALDNN 530
           QG  +  + S++FPSP+HP++TL+LNNVLHV +INKNLIS SKFA DNN
Sbjct: 401 QGLRVTGISSYAFPSPSHPHHTLHLNNVLHVPSINKNLISVSKFASDNN 449


>ref|XP_014632953.1| PREDICTED: uncharacterized protein LOC102666325 [Glycine max]
          Length = 608

 Score =  112 bits (280), Expect = 2e-25
 Identities = 63/129 (48%), Positives = 70/129 (54%), Gaps = 10/129 (7%)
 Frame = +3

Query: 54  VQCQVCHRPSHDASYCYHRFNXXXXXXXXXXXXXXXXXXXIRPPAANN--TT*PQGTMIV 227
           VQCQVCH   HDASYCYHRFN                      P  NN   + PQ     
Sbjct: 249 VQCQVCHHTGHDASYCYHRFNAAYGSNQPYVHGNPYQYVRNTTPNNNNWAQSNPQWQQ-A 307

Query: 228 APKANFTG--------THAQHPTGNNFMDTVATNHVTSMHATPGSTPPPSHLENIFLGNG 383
           AP+ANFTG        ++A HPT NN +DT AT HVT M   PGS PPPSHLE+IFLGNG
Sbjct: 308 APQANFTGYAPQTNFTSYAMHPTMNNNLDTAATQHVTLMQPPPGSAPPPSHLEHIFLGNG 367

Query: 384 QGHSIQSLG 410
           Q     S+G
Sbjct: 368 QAPMQSSMG 376


>gb|PNY02430.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 1064

 Score = 90.9 bits (224), Expect = 6e-18
 Identities = 62/177 (35%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
 Frame = +3

Query: 51  NVQCQVCHRPSHDASYCYHRFNXXXXXXXXXXXXXXXXXXXIRPPAANNTT*-------- 206
           ++QCQVC +  H A  C+HRFN                      P  N            
Sbjct: 297 DLQCQVCAKFGHSALNCWHRFNQQFQGNPAPPVPQPRYGNPYGNPYGNAPPQAFGYAPFP 356

Query: 207 PQGT---------MIVAPKANFTGTHAQHPTGNNFMDTVATNHVTSMHATPGSTPPPSHL 359
           PQ T         + +AP + F    A   + + F D+ A+ HVT          P    
Sbjct: 357 PQNTWMRPPAQAQLTMAPPSAFLTNAAPSTSNSWFPDSGASFHVTGDSRNLQQLTPFEGH 416

Query: 360 ENIFLGNGQGHSIQSLGSFSFPSPTHPNNTLYLNNVLHVLAINKNLISFSKFALDNN 530
           + I++GNGQG  I S GS +FPSPTHP+  L LNN+LHV  I KNLIS S+F  DN+
Sbjct: 417 DQIYIGNGQGLPILSSGSSTFPSPTHPHLNLTLNNLLHVPHITKNLISVSQFCKDNS 473


>gb|PNX93770.1| histone deacetylase [Trifolium pratense]
          Length = 1453

 Score = 88.2 bits (217), Expect = 5e-17
 Identities = 53/159 (33%), Positives = 81/159 (50%)
 Frame = +3

Query: 54  VQCQVCHRPSHDASYCYHRFNXXXXXXXXXXXXXXXXXXXIRPPAANNTT*PQGTMIVAP 233
           VQCQ+C +P+H+A+ C++R+                     RPP  N    P   + +  
Sbjct: 296 VQCQICSKPNHEATDCWYRYEPPSARPNNRGHNNRPPT---RPPHFNPYPRPTAHLAIPQ 352

Query: 234 KANFTGTHAQHPTGNNFMDTVATNHVTSMHATPGSTPPPSHLENIFLGNGQGHSIQSLGS 413
             +         + + + D+ A++H+T      G   P    + + +GNGQG SIQSLG 
Sbjct: 353 YYSSIPDMDTLSSASWYPDSGASHHLTYNPNNLGYRTPYQGHDQVMMGNGQGVSIQSLGH 412

Query: 414 FSFPSPTHPNNTLYLNNVLHVLAINKNLISFSKFALDNN 530
            SF SP +PN  L L+ +LHV  ++KNL+S SKFA DN+
Sbjct: 413 SSFYSPNNPNIQLKLSELLHVPNVSKNLLSVSKFAQDND 451


>gb|KYP68392.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1085

 Score = 87.4 bits (215), Expect = 1e-16
 Identities = 58/160 (36%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
 Frame = +3

Query: 57  QCQVCHRPSHDASYCYHRFNXXXXXXXXXXXXXXXXXXXIRPPAANNTT*PQGTMIVAPK 236
           QCQVCHR  H AS CY+RF+                            T    + + AP 
Sbjct: 171 QCQVCHRYGHVASACYYRFDE---------------------------TYVPSSPLEAPA 203

Query: 237 ANFTGTHAQHPTGNN--FMDTVATNHVTSMHATPGSTPPPSHLENIFLGNGQGHSIQSLG 410
            + T  HA     NN  + D+ A+NHVT++        P    + I +GNGQG  I S G
Sbjct: 204 YHSTNQHANTSVCNNNWYPDSGASNHVTNVSQNIQQFTPFEGPDQIHVGNGQGLHINSTG 263

Query: 411 SFSFPSPTHPNNTLYLNNVLHVLAINKNLISFSKFALDNN 530
             +F SP +P     LNN+L VL+I KNLIS S+F+ DN+
Sbjct: 264 VTTFHSPINPKFQFALNNLLFVLSITKNLISVSQFSKDNS 303


>dbj|GAU30708.1| hypothetical protein TSUD_39320 [Trifolium subterraneum]
          Length = 1432

 Score = 87.4 bits (215), Expect = 1e-16
 Identities = 52/159 (32%), Positives = 79/159 (49%)
 Frame = +3

Query: 54  VQCQVCHRPSHDASYCYHRFNXXXXXXXXXXXXXXXXXXXIRPPAANNTT*PQGTMIVAP 233
           VQCQ+C + +HDA+ C++R+                     RPP  N    P   + +  
Sbjct: 296 VQCQICSKSNHDAANCWYRYEPPSSRTNGRGYNAGNTS---RPPLYNPYPRPSAHLALPQ 352

Query: 234 KANFTGTHAQHPTGNNFMDTVATNHVTSMHATPGSTPPPSHLENIFLGNGQGHSIQSLGS 413
             N T     +   + + D+ A++H+T          P    + + +GNGQG S  SLG 
Sbjct: 353 YYNPTAEFDTYSNASWYPDSGASHHLTFNPNNMAYRTPYQGQDQVTMGNGQGVSTASLGY 412

Query: 414 FSFPSPTHPNNTLYLNNVLHVLAINKNLISFSKFALDNN 530
            +F +P +P+  L LNN+LHV  I+KNL+S S+FA DNN
Sbjct: 413 SNFYAPNNPSVQLKLNNLLHVPNISKNLLSVSRFARDNN 451


>dbj|GAU28846.1| hypothetical protein TSUD_21830 [Trifolium subterraneum]
          Length = 1496

 Score = 87.4 bits (215), Expect = 1e-16
 Identities = 58/166 (34%), Positives = 82/166 (49%), Gaps = 9/166 (5%)
 Frame = +3

Query: 60  CQVCHRPSHDASYCYHRFNXXXXXXXXXXXXXXXXXXXIRPPAANNTT*------PQGTM 221
           CQ+CH+ +HDAS+C  R+N                     P A++          P+ + 
Sbjct: 273 CQICHKNNHDASFCRFRYNTPSQGYGYGYGFGYRPQAPQTPQASSQFPMSYGYGFPRPSR 332

Query: 222 IVAPKANFTGTHAQHPTGNN---FMDTVATNHVTSMHATPGSTPPPSHLENIFLGNGQGH 392
             AP+A  TG     P  NN   + D+ A++HVT   +    T      + + +GNGQG 
Sbjct: 333 PPAPQAMLTGGD---PNFNNQWWYPDSGASHHVTPDPSNLSDTTSLPGSDQVLIGNGQGL 389

Query: 393 SIQSLGSFSFPSPTHPNNTLYLNNVLHVLAINKNLISFSKFALDNN 530
           SI S+GS  FPS  +   +L L ++L V AI KNL+S SKFA DNN
Sbjct: 390 SIDSIGSMKFPSKFNSKTSLSLKHLLLVPAITKNLMSVSKFAQDNN 435


>gb|PNX79340.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 589

 Score = 86.7 bits (213), Expect = 2e-16
 Identities = 54/159 (33%), Positives = 79/159 (49%)
 Frame = +3

Query: 54  VQCQVCHRPSHDASYCYHRFNXXXXXXXXXXXXXXXXXXXIRPPAANNTT*PQGTMIVAP 233
           VQCQ+C RP+HDAS C++R++                    R P  N    P   + +  
Sbjct: 293 VQCQICDRPNHDASICWYRYDPSNAKPQARGYNPSSNP---RTPHFNPYARPTAHLAIPQ 349

Query: 234 KANFTGTHAQHPTGNNFMDTVATNHVTSMHATPGSTPPPSHLENIFLGNGQGHSIQSLGS 413
               T       + + + D+ A++H+T      G   P    + + +GNGQG SI +LG 
Sbjct: 350 YFTPTTEFDSMSSASWYPDSGASHHLTYNPHNFGYRAPYQGHDQVMMGNGQGVSIHALGH 409

Query: 414 FSFPSPTHPNNTLYLNNVLHVLAINKNLISFSKFALDNN 530
             F SP +P+  L LN++L V  I+KNL+S SKFA DNN
Sbjct: 410 SKFKSPNNPDVHLRLNDLLLVPDISKNLLSVSKFAQDNN 448


>gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 1417

 Score = 85.1 bits (209), Expect = 6e-16
 Identities = 54/159 (33%), Positives = 79/159 (49%)
 Frame = +3

Query: 54  VQCQVCHRPSHDASYCYHRFNXXXXXXXXXXXXXXXXXXXIRPPAANNTT*PQGTMIVAP 233
           V+CQ+C +P+HDA  C++R++                    RP   N    P   + + P
Sbjct: 259 VKCQICAKPNHDAINCWYRYDPQAMNQNSRGGYQVGPSN--RPQNFNPYMRPTAHLAM-P 315

Query: 234 KANFTGTHAQHPTGNNFMDTVATNHVTSMHATPGSTPPPSHLENIFLGNGQGHSIQSLGS 413
           +        Q   G  + D+ A++H+T        + P +  + + +GNGQG SI SLG 
Sbjct: 316 QPYAMPNMDQFSNGAWYPDSGASHHLTYNPNNLSYSSPYTGQDQVVMGNGQGVSIHSLGQ 375

Query: 414 FSFPSPTHPNNTLYLNNVLHVLAINKNLISFSKFALDNN 530
             F SP  PN  L L ++LHV  I+KNL+S SKFA DNN
Sbjct: 376 SQFHSPNEPNVKLTLKDLLHVPNISKNLLSVSKFAQDNN 414


>gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 1417

 Score = 85.1 bits (209), Expect = 6e-16
 Identities = 54/159 (33%), Positives = 79/159 (49%)
 Frame = +3

Query: 54  VQCQVCHRPSHDASYCYHRFNXXXXXXXXXXXXXXXXXXXIRPPAANNTT*PQGTMIVAP 233
           V+CQ+C +P+HDA  C++R++                    RP   N    P   + + P
Sbjct: 259 VKCQICAKPNHDAINCWYRYDPQAMNQNSRGGYQVGPSN--RPQNFNPYMRPTAHLAM-P 315

Query: 234 KANFTGTHAQHPTGNNFMDTVATNHVTSMHATPGSTPPPSHLENIFLGNGQGHSIQSLGS 413
           +        Q   G  + D+ A++H+T        + P +  + + +GNGQG SI SLG 
Sbjct: 316 QPYAMPNMDQFSNGAWYPDSGASHHLTYNPNNLSYSSPYTGQDQVVMGNGQGVSIHSLGQ 375

Query: 414 FSFPSPTHPNNTLYLNNVLHVLAINKNLISFSKFALDNN 530
             F SP  PN  L L ++LHV  I+KNL+S SKFA DNN
Sbjct: 376 SQFHSPNEPNVKLTLKDLLHVPNISKNLLSVSKFAQDNN 414


>gb|PNX84343.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 560

 Score = 84.7 bits (208), Expect = 7e-16
 Identities = 56/162 (34%), Positives = 81/162 (50%), Gaps = 4/162 (2%)
 Frame = +3

Query: 54  VQCQVCHRPSHDASYCYHRFNXXXXXXXXXXXXXXXXXXXIRPPAANNTT*PQGTMIV-- 227
           VQCQ+C RP+HDA+ C++R++                    RP   N    P   + +  
Sbjct: 293 VQCQICDRPNHDATICWYRYDSSNSKPQARGYNASSNP---RPAHFNPYARPSAHLAIPQ 349

Query: 228 --APKANFTGTHAQHPTGNNFMDTVATNHVTSMHATPGSTPPPSHLENIFLGNGQGHSIQ 401
             AP A+F    +     + + D+ A++H+T      G   P    + + +GNG G SI+
Sbjct: 350 YYAPSADFDSMSS----ASWYPDSGASHHLTYNPNNFGYRAPYQGHDQVMMGNGTGVSIE 405

Query: 402 SLGSFSFPSPTHPNNTLYLNNVLHVLAINKNLISFSKFALDN 527
           SLG   F SP  PN  L L ++L V AI+KNL+S SKFA DN
Sbjct: 406 SLGHSQFISPNDPNVHLKLTDLLLVPAISKNLLSVSKFAQDN 447


>gb|KYP68420.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 653

 Score = 84.7 bits (208), Expect = 8e-16
 Identities = 57/160 (35%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
 Frame = +3

Query: 57  QCQVCHRPSHDASYCYHRFNXXXXXXXXXXXXXXXXXXXIRPPAANNTT*PQGTMIVAPK 236
           QCQVCHR  H AS CY+RF+                            T    + + AP 
Sbjct: 171 QCQVCHRYGHVASACYYRFDE---------------------------TYVPSSPLEAPA 203

Query: 237 ANFTGTHAQHPTGNN--FMDTVATNHVTSMHATPGSTPPPSHLENIFLGNGQGHSIQSLG 410
            + T  HA     NN  + D+ A+NHVT++        P    + I +GNGQG  I S G
Sbjct: 204 YHSTNQHANTSVCNNNWYPDSGASNHVTNVSQNIQQFTPFEGPDQIHVGNGQGLHINSTG 263

Query: 411 SFSFPSPTHPNNTLYLNNVLHVLAINKNLISFSKFALDNN 530
             +F SP +P     LNN+L V +I KNLIS S+F+ DN+
Sbjct: 264 VTTFHSPINPKFQFALNNLLFVPSITKNLISVSQFSKDNS 303


>gb|PNX92752.1| histone deacetylase [Trifolium pratense]
          Length = 1455

 Score = 84.7 bits (208), Expect = 9e-16
 Identities = 53/159 (33%), Positives = 77/159 (48%)
 Frame = +3

Query: 54  VQCQVCHRPSHDASYCYHRFNXXXXXXXXXXXXXXXXXXXIRPPAANNTT*PQGTMIVAP 233
           V CQ+C RP+HDA+ C++R++                    RP   N    P   + +  
Sbjct: 293 VHCQICDRPNHDATICWYRYDSSNAKPQARGYNTSSNP---RPSHFNPYARPSAHLAIPQ 349

Query: 234 KANFTGTHAQHPTGNNFMDTVATNHVTSMHATPGSTPPPSHLENIFLGNGQGHSIQSLGS 413
               T       + + + D+ A++H+T      G   P    + + +GNG G SI SLG 
Sbjct: 350 YYTPTAEFDSMSSASWYPDSGASHHLTYNPNNFGYRAPYQGHDQVMMGNGTGVSIHSLGY 409

Query: 414 FSFPSPTHPNNTLYLNNVLHVLAINKNLISFSKFALDNN 530
             F SP +PN  L L ++L V AI+KNL+S SKFA DNN
Sbjct: 410 SKFNSPNNPNVHLKLTDLLLVPAISKNLLSVSKFAQDNN 448


>dbj|GAU29238.1| hypothetical protein TSUD_362280 [Trifolium subterraneum]
          Length = 1433

 Score = 84.3 bits (207), Expect = 1e-15
 Identities = 53/159 (33%), Positives = 77/159 (48%)
 Frame = +3

Query: 54  VQCQVCHRPSHDASYCYHRFNXXXXXXXXXXXXXXXXXXXIRPPAANNTT*PQGTMIVAP 233
           VQCQ+C + +HDA+ C++R+                     RPP  N    P   + +  
Sbjct: 296 VQCQICGKANHDAAICWYRYEPPSSRSNACGHNAGSSS---RPPPYNPYPRPSAHLALPQ 352

Query: 234 KANFTGTHAQHPTGNNFMDTVATNHVTSMHATPGSTPPPSHLENIFLGNGQGHSIQSLGS 413
             N           + + D+ A++H+T          P    + + +GNGQG SI+SLG 
Sbjct: 353 YYNPIADMDSVSNASWYPDSGASHHLTFNPNNLTYRTPYQGQDQVTMGNGQGVSIESLGL 412

Query: 414 FSFPSPTHPNNTLYLNNVLHVLAINKNLISFSKFALDNN 530
            +F SP  P   L LNN+LHV  I+KNL+S S+FA DNN
Sbjct: 413 SNFYSPYSPTVQLKLNNLLHVPNISKNLLSVSRFARDNN 451


>gb|KYP34307.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1102

 Score = 83.6 bits (205), Expect = 2e-15
 Identities = 61/179 (34%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
 Frame = +3

Query: 57  QCQVCHRPSHDASYCYHRFNXXXXXXXXXXXXXXXXXXXIRPPAA---NNTT*PQG---- 215
           QCQVCHR  H AS CY+RF+                      P A   N T  P      
Sbjct: 299 QCQVCHRYGHVASACYYRFDETYVPSSPLEAPAYHSINQHTNPGAWYSNQTASPSSHRNE 358

Query: 216 ----TMIVAPKANFTGTHAQ----------HPTGNNFMDTVATNHVTSMHATPGSTPPPS 353
                    P+  FT T AQ              N + D+ A+NHVT++        P  
Sbjct: 359 ILGPRPQFTPQVQFTSTQAQPQAMIASSSSSSINNWYPDSRASNHVTNVSQNIHQFTPFE 418

Query: 354 HLENIFLGNGQGHSIQSLGSFSFPSPTHPNNTLYLNNVLHVLAINKNLISFSKFALDNN 530
             + I +GNGQG  I S G  +F SP +P     LNN+L V +I KNLIS S+F+ DN+
Sbjct: 419 GPDQIHVGNGQGLHINSTGVTTFHSPINPKFQFALNNLLFVPSITKNLISVSQFSKDNS 477


>dbj|GAU19342.1| hypothetical protein TSUD_336290 [Trifolium subterraneum]
          Length = 1442

 Score = 83.6 bits (205), Expect = 2e-15
 Identities = 56/159 (35%), Positives = 83/159 (52%), Gaps = 1/159 (0%)
 Frame = +3

Query: 57  QCQVCHRPSHDASYCYHRFNXXXXXXXXXXXXXXXXXXXIRPPAANNTT*PQGTMIVAPK 236
           QCQ+C + SHDA  C++R++                    RPP  N    P   + +   
Sbjct: 297 QCQICSKSSHDAVNCWYRYHPSPSMMNAPRGHAVAHS---RPPPYNPPMRPSAHLALP-- 351

Query: 237 ANFTGTHAQHPTGNNFMDTVATNHVT-SMHATPGSTPPPSHLENIFLGNGQGHSIQSLGS 413
             +TG  ++    + + D+ A++H+T   +    S P   H + + +GNGQG SI SLG 
Sbjct: 352 -YYTGAPSE---ASWYPDSGASHHLTYDPYNLVHSNPYTGH-DQVMMGNGQGVSINSLGH 406

Query: 414 FSFPSPTHPNNTLYLNNVLHVLAINKNLISFSKFALDNN 530
            SF SP+ P+  L L ++LHV  I+KNL+S SKFA DNN
Sbjct: 407 SSFKSPSMPSVKLELKDLLHVPNISKNLLSVSKFAQDNN 445


>gb|PNY12956.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 823

 Score = 82.8 bits (203), Expect = 4e-15
 Identities = 53/158 (33%), Positives = 77/158 (48%)
 Frame = +3

Query: 57  QCQVCHRPSHDASYCYHRFNXXXXXXXXXXXXXXXXXXXIRPPAANNTT*PQGTMIVAPK 236
           QCQ+C + +H+A  C++R++                    RPP  N    P   + +   
Sbjct: 293 QCQICGKSNHEAIICWYRYDPPKPQSRGYNAANSS-----RPPHFNPYMRPTAHLALPQY 347

Query: 237 ANFTGTHAQHPTGNNFMDTVATNHVTSMHATPGSTPPPSHLENIFLGNGQGHSIQSLGSF 416
            +         T + + D+ A++H+T          P    + + +GNGQG SIQSLG  
Sbjct: 348 YSAPPDMDTVSTASWYPDSGASHHLTYNPNNLAFRIPYQGHDQVMMGNGQGVSIQSLGHS 407

Query: 417 SFPSPTHPNNTLYLNNVLHVLAINKNLISFSKFALDNN 530
            F SP +PN  L LN +LHV  I+KNL+S SKFA DNN
Sbjct: 408 IFNSPNNPNVHLKLNELLHVPNISKNLLSVSKFAQDNN 445


>gb|PNX93512.1| histone deacetylase, partial [Trifolium pratense]
          Length = 1418

 Score = 82.8 bits (203), Expect = 4e-15
 Identities = 54/158 (34%), Positives = 77/158 (48%)
 Frame = +3

Query: 54  VQCQVCHRPSHDASYCYHRFNXXXXXXXXXXXXXXXXXXXIRPPAANNTT*PQGTMIVAP 233
           VQCQ+C + +HDA+ C+ R++                    R P  N    P   + +  
Sbjct: 294 VQCQICGKSNHDAANCWFRYDPPNSRPNARGHNAGFTS---RQPHYNPYPRPSAHLAIPQ 350

Query: 234 KANFTGTHAQHPTGNNFMDTVATNHVTSMHATPGSTPPPSHLENIFLGNGQGHSIQSLGS 413
             N         T + + D+ A++H+T          P    + + +GNGQG SIQSLG 
Sbjct: 351 YYNPIPDMDTVSTASWYPDSGASHHLTFNPNNFAYRVPYQGQDQVSMGNGQGVSIQSLGH 410

Query: 414 FSFPSPTHPNNTLYLNNVLHVLAINKNLISFSKFALDN 527
            +F SP + N  L LNN+LHV  I+KNL+S SKFA DN
Sbjct: 411 SNFTSPYNQNVHLKLNNLLHVPTISKNLLSVSKFAQDN 448


>gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1408

 Score = 82.4 bits (202), Expect = 5e-15
 Identities = 59/170 (34%), Positives = 76/170 (44%), Gaps = 11/170 (6%)
 Frame = +3

Query: 54  VQCQVCHRPSHDASYCYHRFNXXXXXXXXXXXXXXXXXXX--IRPPAANNTT*PQGTMIV 227
           VQCQ+CH+  H+AS CY   N                       PP     T P      
Sbjct: 260 VQCQICHKRGHEASTCYQLSNSLALGASWSPYSLGGSLPGSVFHPPGFTYPTAPANPPPR 319

Query: 228 APKANFTGTHAQHPTGNNFMDTVATNHVTSMHATPGSTPPPSHL---------ENIFLGN 380
              A+ +      PT N      AT  +    A+  +TP P +L         E+I + N
Sbjct: 320 PRTASASAAPPAAPTLNT-----ATAWIPDSGASHHATPDPQYLLQSAQFTGAEHIAMAN 374

Query: 381 GQGHSIQSLGSFSFPSPTHPNNTLYLNNVLHVLAINKNLISFSKFALDNN 530
           GQG SI S+GS  F SP HP+  L L ++L V ++ KNLIS SKFA DNN
Sbjct: 375 GQGTSITSVGSNMFRSPMHPSTILSLKDLLLVPSLTKNLISVSKFAKDNN 424


>gb|PNY05793.1| histone deacetylase [Trifolium pratense]
          Length = 1485

 Score = 82.0 bits (201), Expect = 7e-15
 Identities = 53/159 (33%), Positives = 75/159 (47%), Gaps = 3/159 (1%)
 Frame = +3

Query: 60  CQVCHRPSHDASYCYHRFNXXXXXXXXXXXXXXXXXXX-IRPPAANNTT*PQGTMIVAPK 236
           CQ+C +  H+AS C++R++                    +RPP+ N    P   +   P 
Sbjct: 308 CQICGKNGHEASGCWYRYDPNPTPKQFKFPGFASSSNPSMRPPSYNPYMRPNANLAFNPY 367

Query: 237 ANFT--GTHAQHPTGNNFMDTVATNHVTSMHATPGSTPPPSHLENIFLGNGQGHSIQSLG 410
              +  G  + +     + D+ AT+H+T          P +  E + +GNGQG  I SLG
Sbjct: 368 YAMSEYGAPSVYSEAPWYPDSGATHHLTFNQQNLAQRSPYTGQEQVLMGNGQGVCINSLG 427

Query: 411 SFSFPSPTHPNNTLYLNNVLHVLAINKNLISFSKFALDN 527
                S   PN  L LNN+LHV  I+KNLIS SKFA DN
Sbjct: 428 HSKIQSQFKPNIQLSLNNLLHVPNISKNLISVSKFAQDN 466