BLASTX nr result
ID: Astragalus24_contig00015605
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus24_contig00015605
(1051 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|GAU46782.1| hypothetical protein TSUD_351810 [Trifolium subt... 215 1e-82
gb|KHN31995.1| Copia protein, partial [Glycine soja] 222 1e-78
dbj|GAU31202.1| hypothetical protein TSUD_210590 [Trifolium subt... 193 1e-78
dbj|GAU41219.1| hypothetical protein TSUD_128950 [Trifolium subt... 199 1e-78
gb|PNX58721.1| putative copia-type protein, partial [Trifolium p... 212 5e-78
gb|PNX92373.1| retrovirus-related Pol polyprotein from transposo... 208 1e-76
gb|PNX87108.1| retrovirus-related Pol polyprotein from transposo... 207 3e-76
gb|PNX86354.1| retrovirus-related Pol polyprotein from transposo... 207 3e-76
dbj|GAU32754.1| hypothetical protein TSUD_323220 [Trifolium subt... 193 6e-76
gb|PNX92076.1| retrovirus-related Pol polyprotein from transposo... 201 8e-76
dbj|GAU51097.1| hypothetical protein TSUD_185270 [Trifolium subt... 189 1e-75
gb|PNX94461.1| retrovirus-related Pol polyprotein from transposo... 203 1e-75
gb|PNX93391.1| retrovirus-related Pol polyprotein from transposo... 197 2e-75
dbj|GAU36120.1| hypothetical protein TSUD_374830 [Trifolium subt... 192 4e-74
dbj|GAU41486.1| hypothetical protein TSUD_239620 [Trifolium subt... 186 4e-74
gb|AJY78065.1| putative polyprotein [Glycine max] 197 6e-74
gb|KHN24193.1| Retrovirus-related Pol polyprotein from transposo... 197 1e-73
dbj|GAU39523.1| hypothetical protein TSUD_222930 [Trifolium subt... 184 5e-73
dbj|GAU51049.1| hypothetical protein TSUD_371270 [Trifolium subt... 182 1e-72
dbj|GAU46985.1| hypothetical protein TSUD_403190 [Trifolium subt... 182 2e-72
>dbj|GAU46782.1| hypothetical protein TSUD_351810 [Trifolium subterraneum]
Length = 1512
Score = 215 bits (547), Expect(2) = 1e-82
Identities = 101/148 (68%), Positives = 124/148 (83%)
Frame = +3
Query: 276 FFLGSSLISWRTKKQQTVSRSSSEAEYRAMSTAVRELQWLLFLLRDLNISCERPPTLYCD 455
FF+GSSLISWR KKQ TVSRSSSEAEYR++S A ELQW+++LL+DL+I CERPP LYCD
Sbjct: 1361 FFIGSSLISWRAKKQNTVSRSSSEAEYRSLSFASCELQWIVYLLKDLSIDCERPPVLYCD 1420
Query: 456 HQSALHIAANPVFHERTEHLEIDCHFVREKLQEGLMKLLLVPSKGQLADFFTKALTPTNF 635
+QSA+HIA+NPVFHERT+HLEIDCH VR+K+Q G+ KLL + +K QLADFFTKAL P F
Sbjct: 1421 NQSAIHIASNPVFHERTKHLEIDCHLVRDKVQSGVFKLLPISTKAQLADFFTKALPPKVF 1480
Query: 636 IPFISKLRMINIYHGQACGGLLKYKNDD 719
F+SKL M+NI+H ACG LL +++D
Sbjct: 1481 NSFLSKLNMLNIFHVPACGRLLNEEDND 1508
Score = 121 bits (304), Expect(2) = 1e-82
Identities = 58/100 (58%), Positives = 70/100 (70%), Gaps = 8/100 (8%)
Frame = +2
Query: 5 DGGGAYKDTSSYRRLIGRLLYITKTRPDITFAVQQIRQHVNSPTVTHHSAVCRVLRYLKG 184
D AY D YRRLIG+LLY+T TRPDI+FA+QQ+ Q ++SPT TH CRV+RYLKG
Sbjct: 1263 DSSPAYDDVGGYRRLIGKLLYLTTTRPDISFAIQQLSQFLSSPTTTHFDTACRVVRYLKG 1322
Query: 185 NPGMGLMFPRNFILQLSGF--------SDTRKSVTGYCFF 280
+PG GL FPR LQL GF +DTR+S +GYCFF
Sbjct: 1323 SPGRGLFFPRQSPLQLLGFADADWANCADTRRSTSGYCFF 1362
>gb|KHN31995.1| Copia protein, partial [Glycine soja]
Length = 224
Score = 222 bits (566), Expect(2) = 1e-78
Identities = 105/139 (75%), Positives = 121/139 (87%)
Frame = +3
Query: 276 FFLGSSLISWRTKKQQTVSRSSSEAEYRAMSTAVRELQWLLFLLRDLNISCERPPTLYCD 455
FFLG+SLISWR KKQQTVSRSSSEAEYRA+ST ELQWLL+LL DL+I+C R P LYCD
Sbjct: 86 FFLGASLISWRAKKQQTVSRSSSEAEYRALSTTACELQWLLYLLHDLHITCTRAPALYCD 145
Query: 456 HQSALHIAANPVFHERTEHLEIDCHFVREKLQEGLMKLLLVPSKGQLADFFTKALTPTNF 635
+QSALHIAANP+FHERT+HLEIDCHFVR K+QEG+++LL + SK QLADFFTK L P +F
Sbjct: 146 NQSALHIAANPMFHERTKHLEIDCHFVRNKIQEGVLRLLPISSKEQLADFFTKVLPPPSF 205
Query: 636 IPFISKLRMINIYHGQACG 692
+PFISKL MI+IYH ACG
Sbjct: 206 VPFISKLGMIDIYHAPACG 224
Score = 101 bits (251), Expect(2) = 1e-78
Identities = 48/87 (55%), Positives = 64/87 (73%), Gaps = 8/87 (9%)
Frame = +2
Query: 44 RLIGRLLYITKTRPDITFAVQQIRQHVNSPTVTHHSAVCRVLRYLKGNPGMGLMFPRNFI 223
RLIG+LLY+ TRP+ITFA QQ+ Q ++ PT+TH++A RV+ YLKG+PG GL FPR
Sbjct: 1 RLIGKLLYLNNTRPNITFATQQLSQFLSKPTMTHYNAAYRVVIYLKGSPGQGLFFPRKSE 60
Query: 224 LQLSGFS--------DTRKSVTGYCFF 280
+QL GFS D+R+S++GYCFF
Sbjct: 61 IQLLGFSNAYWAGCLDSRRSISGYCFF 87
>dbj|GAU31202.1| hypothetical protein TSUD_210590 [Trifolium subterraneum]
Length = 1059
Score = 193 bits (490), Expect(2) = 1e-78
Identities = 92/140 (65%), Positives = 113/140 (80%)
Frame = +3
Query: 276 FFLGSSLISWRTKKQQTVSRSSSEAEYRAMSTAVRELQWLLFLLRDLNISCERPPTLYCD 455
FFLGSSL+SW+ KKQ TVSRSSSEAEYRA+STA EL WL FL++DLNI C +PP +YCD
Sbjct: 919 FFLGSSLVSWKAKKQLTVSRSSSEAEYRALSTATCELIWLTFLMKDLNIHCSKPPVIYCD 978
Query: 456 HQSALHIAANPVFHERTEHLEIDCHFVREKLQEGLMKLLLVPSKGQLADFFTKALTPTNF 635
QSA+HIA+NPVFHERT+HLEI+CHFVREKLQ+GL++LL + ++ QLAD TK L F
Sbjct: 979 SQSAMHIASNPVFHERTKHLEIECHFVREKLQQGLLRLLPISTEDQLADCLTKPLAAPKF 1038
Query: 636 IPFISKLRMINIYHGQACGG 695
FISKL +++IY + GG
Sbjct: 1039 NSFISKLGLLDIYEPKLEGG 1058
Score = 130 bits (326), Expect(2) = 1e-78
Identities = 61/101 (60%), Positives = 77/101 (76%), Gaps = 8/101 (7%)
Frame = +2
Query: 2 DDGGGAYKDTSSYRRLIGRLLYITKTRPDITFAVQQIRQHVNSPTVTHHSAVCRVLRYLK 181
+D G Y+D S+YRRLIGRLLY+T TRPDI+FA+QQ+ Q ++ PT+ H++A CRV+RYLK
Sbjct: 820 NDAGKLYEDISAYRRLIGRLLYLTNTRPDISFAIQQLSQFLSKPTMVHYNAACRVVRYLK 879
Query: 182 GNPGMGLMFPRNFILQLSGFS--------DTRKSVTGYCFF 280
NPG GL FPR+F LQL GF+ DTR+S TGYCFF
Sbjct: 880 HNPGRGLFFPRHFDLQLLGFTDADWARCIDTRRSTTGYCFF 920
>dbj|GAU41219.1| hypothetical protein TSUD_128950 [Trifolium subterraneum]
Length = 539
Score = 199 bits (505), Expect(2) = 1e-78
Identities = 94/136 (69%), Positives = 113/136 (83%)
Frame = +3
Query: 276 FFLGSSLISWRTKKQQTVSRSSSEAEYRAMSTAVRELQWLLFLLRDLNISCERPPTLYCD 455
FFLG SL+SW+ KKQ TVSRSSSEA+YRA+STA EL WLLFLLRDLN +C +PP LYCD
Sbjct: 399 FFLGMSLVSWKAKKQVTVSRSSSEADYRALSTATCELIWLLFLLRDLNTTCSKPPVLYCD 458
Query: 456 HQSALHIAANPVFHERTEHLEIDCHFVREKLQEGLMKLLLVPSKGQLADFFTKALTPTNF 635
QSA+HIA+NPVFHERT+HLEIDCH VREK+Q+GL+KLL + ++ QLADF TKAL F
Sbjct: 459 SQSAMHIASNPVFHERTKHLEIDCHLVREKVQQGLLKLLPISTQEQLADFLTKALPSPKF 518
Query: 636 IPFISKLRMINIYHGQ 683
F+SKL M++IYH +
Sbjct: 519 NSFVSKLGMLDIYHSK 534
Score = 124 bits (311), Expect(2) = 1e-78
Identities = 59/100 (59%), Positives = 73/100 (73%), Gaps = 8/100 (8%)
Frame = +2
Query: 5 DGGGAYKDTSSYRRLIGRLLYITKTRPDITFAVQQIRQHVNSPTVTHHSAVCRVLRYLKG 184
D G Y D SSYRRLIG+LLY+T TRPDI+FA QQ+ Q ++ PTVTH+ A CRV+RYLK
Sbjct: 301 DNGETYADISSYRRLIGKLLYLTNTRPDISFATQQLSQFLHKPTVTHYKAACRVVRYLKH 360
Query: 185 NPGMGLMFPRNFILQLSGFS--------DTRKSVTGYCFF 280
+PG GLM PRN +Q+ G+S DTR+S +GYCFF
Sbjct: 361 SPGKGLMLPRNSEIQILGYSDADWAGCLDTRRSTSGYCFF 400
>gb|PNX58721.1| putative copia-type protein, partial [Trifolium pratense]
Length = 277
Score = 212 bits (540), Expect(2) = 5e-78
Identities = 100/134 (74%), Positives = 118/134 (88%)
Frame = +3
Query: 276 FFLGSSLISWRTKKQQTVSRSSSEAEYRAMSTAVRELQWLLFLLRDLNISCERPPTLYCD 455
FFLG+SLISWR KKQ TVSRSSSEAEYRA+S A ELQWL++LL+DL ++C +PP LYCD
Sbjct: 143 FFLGNSLISWRAKKQHTVSRSSSEAEYRALSFASCELQWLVYLLKDLQVNCIKPPVLYCD 202
Query: 456 HQSALHIAANPVFHERTEHLEIDCHFVREKLQEGLMKLLLVPSKGQLADFFTKALTPTNF 635
+QSALHIAANPVFHERT+HLEIDCHFVREKLQ+G+ KLL + +K QLADFFTKAL P +F
Sbjct: 203 NQSALHIAANPVFHERTKHLEIDCHFVREKLQQGIFKLLPIHTKAQLADFFTKALPPKSF 262
Query: 636 IPFISKLRMINIYH 677
+ FISKL M++IYH
Sbjct: 263 LSFISKLNMLDIYH 276
Score = 108 bits (271), Expect(2) = 5e-78
Identities = 51/100 (51%), Positives = 67/100 (67%), Gaps = 8/100 (8%)
Frame = +2
Query: 5 DGGGAYKDTSSYRRLIGRLLYITKTRPDITFAVQQIRQHVNSPTVTHHSAVCRVLRYLKG 184
D Y D + YRRL+G+LLY+T TRPDI F QQ+ Q +++PT TH+ CRV+RYLK
Sbjct: 45 DTASPYADIAGYRRLVGKLLYLTTTRPDIAFVTQQLSQFLSAPTQTHYDTACRVVRYLKN 104
Query: 185 NPGMGLMFPRNFILQLSGFS--------DTRKSVTGYCFF 280
+PG GL+F R+ L L GF+ DTR+S +GYCFF
Sbjct: 105 SPGRGLLFRRDSQLHLLGFTDADWAGCLDTRRSTSGYCFF 144
>gb|PNX92373.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Trifolium pratense]
Length = 1125
Score = 208 bits (529), Expect(2) = 1e-76
Identities = 98/150 (65%), Positives = 123/150 (82%)
Frame = +3
Query: 276 FFLGSSLISWRTKKQQTVSRSSSEAEYRAMSTAVRELQWLLFLLRDLNISCERPPTLYCD 455
FFLG SL+SWRTKKQ TV+RSSSEAEYRA+++A ELQWLL+LL+DL + C + P +YCD
Sbjct: 976 FFLGQSLVSWRTKKQFTVARSSSEAEYRALASATCELQWLLYLLQDLGVPCSKLPVIYCD 1035
Query: 456 HQSALHIAANPVFHERTEHLEIDCHFVREKLQEGLMKLLLVPSKGQLADFFTKALTPTNF 635
+QSALHIAANPVFHERT+HL+IDCH VREK+ G+MKLL V SK Q+ADFFTKAL P F
Sbjct: 1036 NQSALHIAANPVFHERTKHLDIDCHIVREKMLAGVMKLLPVSSKDQIADFFTKALLPQPF 1095
Query: 636 IPFISKLRMINIYHGQACGGLLKYKNDDST 725
++KL M++IYH CG +L++K +D+T
Sbjct: 1096 GILLAKLGMVDIYHPPTCGRVLEHKTEDNT 1125
Score = 108 bits (270), Expect(2) = 1e-76
Identities = 53/101 (52%), Positives = 71/101 (70%), Gaps = 8/101 (7%)
Frame = +2
Query: 2 DDGGGAYKDTSSYRRLIGRLLYITKTRPDITFAVQQIRQHVNSPTVTHHSAVCRVLRYLK 181
+D G ++D S+YRRL+GRLLY+T TRPDIT+ QQ+ Q ++ PT H++A RVL+YLK
Sbjct: 877 NDIGPIFEDVSAYRRLVGRLLYLTTTRPDITYVTQQLSQFLSRPTQMHYNAALRVLKYLK 936
Query: 182 GNPGMGLMFPRNFILQLSGFS--------DTRKSVTGYCFF 280
+PG GL FPR LQL GFS D+R+S++G CFF
Sbjct: 937 TSPGRGLFFPRASQLQLLGFSDADWAGCKDSRRSISGQCFF 977
>gb|PNX87108.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 517
Score = 207 bits (526), Expect(2) = 3e-76
Identities = 100/148 (67%), Positives = 118/148 (79%)
Frame = +3
Query: 276 FFLGSSLISWRTKKQQTVSRSSSEAEYRAMSTAVRELQWLLFLLRDLNISCERPPTLYCD 455
FFLG SLISWRTKKQ TVSRSSSEAEYRA++ A ELQW+L+LL+D+ I C + P +YCD
Sbjct: 359 FFLGKSLISWRTKKQLTVSRSSSEAEYRALAAATCELQWILYLLKDIQIQCSKLPVIYCD 418
Query: 456 HQSALHIAANPVFHERTEHLEIDCHFVREKLQEGLMKLLLVPSKGQLADFFTKALTPTNF 635
+QSALHIAANPVFHERT+HLEIDCH VREKLQ G+MKLL V S+ Q+ADFFTKAL P F
Sbjct: 419 NQSALHIAANPVFHERTKHLEIDCHLVREKLQAGVMKLLPVTSQNQVADFFTKALLPQPF 478
Query: 636 IPFISKLRMINIYHGQACGGLLKYKNDD 719
+SKL +++IY CGGLL +D
Sbjct: 479 NTLMSKLNLLDIYQPSPCGGLLHSNIED 506
Score = 108 bits (270), Expect(2) = 3e-76
Identities = 51/100 (51%), Positives = 67/100 (67%), Gaps = 8/100 (8%)
Frame = +2
Query: 5 DGGGAYKDTSSYRRLIGRLLYITKTRPDITFAVQQIRQHVNSPTVTHHSAVCRVLRYLKG 184
D G Y D +YRRLIGRL+Y+ TRPDIT+ QQ+ Q ++ PT H++A RVL+YLK
Sbjct: 261 DNGTPYDDIPAYRRLIGRLIYLNTTRPDITYVTQQLSQFLSKPTTNHYNAAIRVLKYLKN 320
Query: 185 NPGMGLMFPRNFILQLSGFS--------DTRKSVTGYCFF 280
+PG GL FPR+ L + GFS DTR+S++G CFF
Sbjct: 321 SPGRGLFFPRDSSLHILGFSDADWAGCVDTRRSISGQCFF 360
>gb|PNX86354.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 512
Score = 207 bits (526), Expect(2) = 3e-76
Identities = 102/154 (66%), Positives = 119/154 (77%)
Frame = +3
Query: 276 FFLGSSLISWRTKKQQTVSRSSSEAEYRAMSTAVRELQWLLFLLRDLNISCERPPTLYCD 455
FFLG SLISWRTKKQ TVSRSSSEAEYRA++ A ELQW+L+LL+D+ I C + P +YCD
Sbjct: 359 FFLGKSLISWRTKKQLTVSRSSSEAEYRALAAATCELQWILYLLKDIQIQCSKLPVIYCD 418
Query: 456 HQSALHIAANPVFHERTEHLEIDCHFVREKLQEGLMKLLLVPSKGQLADFFTKALTPTNF 635
+QSALHIAANPVFHERT+HLEIDCH VREKLQ G+MKLL V S+ Q+ADFFTKAL P F
Sbjct: 419 NQSALHIAANPVFHERTKHLEIDCHLVREKLQAGVMKLLPVTSQNQVADFFTKALLPQPF 478
Query: 636 IPFISKLRMINIYHGQACGGLLKYKNDDSTGDLS 737
+SKL + +IY CGGLL +D LS
Sbjct: 479 NTLMSKLNLQDIYQPSPCGGLLHSNIEDKDKSLS 512
Score = 108 bits (270), Expect(2) = 3e-76
Identities = 51/100 (51%), Positives = 67/100 (67%), Gaps = 8/100 (8%)
Frame = +2
Query: 5 DGGGAYKDTSSYRRLIGRLLYITKTRPDITFAVQQIRQHVNSPTVTHHSAVCRVLRYLKG 184
D G Y D +YRRLIGRL+Y+ TRPDIT+ QQ+ Q ++ PT H++A RVL+YLK
Sbjct: 261 DNGTPYDDIPAYRRLIGRLIYLNTTRPDITYVTQQLSQFLSKPTTNHYNAAIRVLKYLKN 320
Query: 185 NPGMGLMFPRNFILQLSGFS--------DTRKSVTGYCFF 280
+PG GL FPR+ L + GFS DTR+S++G CFF
Sbjct: 321 SPGRGLFFPRDSSLHILGFSDADWAGCVDTRRSISGQCFF 360
>dbj|GAU32754.1| hypothetical protein TSUD_323220 [Trifolium subterraneum]
Length = 1095
Score = 193 bits (491), Expect(2) = 6e-76
Identities = 97/177 (54%), Positives = 124/177 (70%)
Frame = +3
Query: 276 FFLGSSLISWRTKKQQTVSRSSSEAEYRAMSTAVRELQWLLFLLRDLNISCERPPTLYCD 455
FFLGSSLISW+ KKQ T+S+SSSEAEYRA+S++ EL WLL+LL+DL I C + P ++CD
Sbjct: 587 FFLGSSLISWKAKKQLTISKSSSEAEYRALSSSTCELIWLLYLLKDLQIECTQLPVIFCD 646
Query: 456 HQSALHIAANPVFHERTEHLEIDCHFVREKLQEGLMKLLLVPSKGQLADFFTKALTPTNF 635
+QSALHIA+NPVFHERT+H+EIDCH VREK+Q GL++LL + ++ QL D TKAL F
Sbjct: 647 NQSALHIASNPVFHERTKHIEIDCHLVREKVQAGLLRLLPISTQDQLTDCLTKALPTAKF 706
Query: 636 IPFISKLRMINIYHGQACGGLLKYKNDDSTGDLSNNSANEDMHKEDSSKCDKAKQSE 806
FI+KL +++IY ACG LL K S SNN + +D K D E
Sbjct: 707 NHFIAKLGLLDIYQASACGRLLNIKIASSP---SNNHEEASLANDDQVKSDLYNMQE 760
Score = 120 bits (302), Expect(2) = 6e-76
Identities = 55/101 (54%), Positives = 74/101 (73%), Gaps = 8/101 (7%)
Frame = +2
Query: 2 DDGGGAYKDTSSYRRLIGRLLYITKTRPDITFAVQQIRQHVNSPTVTHHSAVCRVLRYLK 181
+D G ++D S YRRL+G+LLY+T TRPDI +A QQ+ Q +++PT+TH+ A CRV+RYLK
Sbjct: 488 NDNGKPFEDISLYRRLVGKLLYLTNTRPDIAYATQQLSQFLHNPTITHYKAACRVVRYLK 547
Query: 182 GNPGMGLMFPRNFILQLSGFS--------DTRKSVTGYCFF 280
NPG GLMF RN +Q+ G+S DTR+S +GYCFF
Sbjct: 548 HNPGRGLMFHRNLDIQIIGYSDADWAGCLDTRRSTSGYCFF 588
>gb|PNX92076.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 720
Score = 201 bits (510), Expect(2) = 8e-76
Identities = 97/143 (67%), Positives = 116/143 (81%)
Frame = +3
Query: 276 FFLGSSLISWRTKKQQTVSRSSSEAEYRAMSTAVRELQWLLFLLRDLNISCERPPTLYCD 455
FFLG SLISWRTKKQ TV+RSSSEAEYRA++ A ELQWL +LL+DL+I+C + P LYCD
Sbjct: 557 FFLGQSLISWRTKKQLTVARSSSEAEYRALAAATCELQWLAYLLQDLHITCPKLPVLYCD 616
Query: 456 HQSALHIAANPVFHERTEHLEIDCHFVREKLQEGLMKLLLVPSKGQLADFFTKALTPTNF 635
+QSALHIAANPVFHERT+H++IDCH VREKLQ GLMKLL V SK Q+ADFFTK+L P F
Sbjct: 617 NQSALHIAANPVFHERTKHIDIDCHIVREKLQAGLMKLLPVSSKDQIADFFTKSLLPQPF 676
Query: 636 IPFISKLRMINIYHGQACGGLLK 704
++KL M +IY CG ++K
Sbjct: 677 GVLLAKLGMFDIYQAPTCGRVIK 699
Score = 113 bits (282), Expect(2) = 8e-76
Identities = 55/100 (55%), Positives = 69/100 (69%), Gaps = 8/100 (8%)
Frame = +2
Query: 5 DGGGAYKDTSSYRRLIGRLLYITKTRPDITFAVQQIRQHVNSPTVTHHSAVCRVLRYLKG 184
D ++D S+YRRL+GRLLY+ TRPDITF QQ+ Q ++ PT TH+SA RVLRYLK
Sbjct: 459 DDSAPFEDISAYRRLVGRLLYLNTTRPDITFITQQLSQFLSKPTHTHYSAAMRVLRYLKN 518
Query: 185 NPGMGLMFPRNFILQLSGFS--------DTRKSVTGYCFF 280
PG GL FPRN LQ+ GFS D+R+S++G CFF
Sbjct: 519 CPGRGLFFPRNSTLQILGFSDADWAGCKDSRRSISGQCFF 558
>dbj|GAU51097.1| hypothetical protein TSUD_185270 [Trifolium subterraneum]
Length = 1179
Score = 189 bits (480), Expect(2) = 1e-75
Identities = 87/133 (65%), Positives = 109/133 (81%)
Frame = +3
Query: 276 FFLGSSLISWRTKKQQTVSRSSSEAEYRAMSTAVRELQWLLFLLRDLNISCERPPTLYCD 455
FFLGSSLISW+ KKQ+T++RSSS+AEY A+++A ELQWLL+LL DLN+ C RPP LYCD
Sbjct: 1046 FFLGSSLISWKAKKQETIARSSSKAEYIALTSATCELQWLLYLLEDLNVKCSRPPVLYCD 1105
Query: 456 HQSALHIAANPVFHERTEHLEIDCHFVREKLQEGLMKLLLVPSKGQLADFFTKALTPTNF 635
QSA+HIA+NPVFHERT+HLEIDCH +REKLQ+G++KLL + + Q+ADF TK L F
Sbjct: 1106 SQSAIHIASNPVFHERTKHLEIDCHLIREKLQKGILKLLSISTNEQVADFLTKPLVSPKF 1165
Query: 636 IPFISKLRMINIY 674
+SKL MINI+
Sbjct: 1166 KYLLSKLNMINIF 1178
Score = 124 bits (311), Expect(2) = 1e-75
Identities = 58/100 (58%), Positives = 74/100 (74%), Gaps = 8/100 (8%)
Frame = +2
Query: 5 DGGGAYKDTSSYRRLIGRLLYITKTRPDITFAVQQIRQHVNSPTVTHHSAVCRVLRYLKG 184
D G ++D + YRRLIGRLLY+T TRPDI+ A QQ+ Q + +PT+TH++A CR+LRYLK
Sbjct: 948 DNGALFEDITQYRRLIGRLLYLTTTRPDISLATQQLSQFLQAPTITHYNAACRILRYLKQ 1007
Query: 185 NPGMGLMFPRNFILQLSGFS--------DTRKSVTGYCFF 280
PG+GLMFPR+ LQL GF+ D+RKS TGYCFF
Sbjct: 1008 EPGLGLMFPRDSELQLLGFADADWAGCVDSRKSTTGYCFF 1047
>gb|PNX94461.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 1000
Score = 203 bits (517), Expect(2) = 1e-75
Identities = 99/159 (62%), Positives = 126/159 (79%)
Frame = +3
Query: 276 FFLGSSLISWRTKKQQTVSRSSSEAEYRAMSTAVRELQWLLFLLRDLNISCERPPTLYCD 455
FFLG SLISWRTKKQ TV+RSSSEAEYRA+++A ELQWL++LL+DL+++C + P LYCD
Sbjct: 840 FFLGQSLISWRTKKQITVARSSSEAEYRALASATCELQWLVYLLQDLHVTCSKLPVLYCD 899
Query: 456 HQSALHIAANPVFHERTEHLEIDCHFVREKLQEGLMKLLLVPSKGQLADFFTKALTPTNF 635
+QSALHIAANPVFHERT+HL+IDCH VREKLQ GLMKLL V SK Q+ADFFTK L P F
Sbjct: 900 NQSALHIAANPVFHERTKHLDIDCHVVREKLQAGLMKLLPVSSKDQIADFFTKTLLPQPF 959
Query: 636 IPFISKLRMINIYHGQACGGLLKYKNDDSTGDLSNNSAN 752
++KL M++IY CG +L+ + +++ D N+ +
Sbjct: 960 GILLAKLGMVDIYQAPPCGRVLEPIHTEASSDNKLNTTH 998
Score = 110 bits (274), Expect(2) = 1e-75
Identities = 52/100 (52%), Positives = 70/100 (70%), Gaps = 8/100 (8%)
Frame = +2
Query: 5 DGGGAYKDTSSYRRLIGRLLYITKTRPDITFAVQQIRQHVNSPTVTHHSAVCRVLRYLKG 184
D ++D S+YRRL+GRLLY+ TRPDITF QQ+ Q ++ PT TH++A RVL+YLK
Sbjct: 742 DNSAPFEDISAYRRLVGRLLYLNTTRPDITFITQQLSQFLSKPTHTHYTAALRVLKYLKN 801
Query: 185 NPGMGLMFPRNFILQLSGFS--------DTRKSVTGYCFF 280
PG GL FPR+ LQ+ GFS D+R+S++G+CFF
Sbjct: 802 CPGRGLFFPRSSSLQILGFSDADWAGCKDSRRSISGHCFF 841
>gb|PNX93391.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 1296
Score = 197 bits (500), Expect(2) = 2e-75
Identities = 95/140 (67%), Positives = 113/140 (80%)
Frame = +3
Query: 276 FFLGSSLISWRTKKQQTVSRSSSEAEYRAMSTAVRELQWLLFLLRDLNISCERPPTLYCD 455
FF+G SLISWR KKQ TVSRSSSEAEYRA+S+A ELQWLL+LL DL ++ + PTLYCD
Sbjct: 1156 FFMGKSLISWRAKKQATVSRSSSEAEYRALSSATCELQWLLYLLADLKVTLTKTPTLYCD 1215
Query: 456 HQSALHIAANPVFHERTEHLEIDCHFVREKLQEGLMKLLLVPSKGQLADFFTKALTPTNF 635
+QSA+HIA+NPVFHERT+HL+IDCH VREK+ +G++KLL V + Q+ADF TKAL P F
Sbjct: 1216 NQSAVHIASNPVFHERTKHLDIDCHLVREKVLQGILKLLPVSTNDQMADFLTKALAPPKF 1275
Query: 636 IPFISKLRMINIYHGQACGG 695
FISKL MINIY Q GG
Sbjct: 1276 YEFISKLNMINIYQVQLEGG 1295
Score = 115 bits (288), Expect(2) = 2e-75
Identities = 55/98 (56%), Positives = 69/98 (70%), Gaps = 8/98 (8%)
Frame = +2
Query: 11 GGAYKDTSSYRRLIGRLLYITKTRPDITFAVQQIRQHVNSPTVTHHSAVCRVLRYLKGNP 190
G Y D S YRRL+G+LLY+ TRPDI FA QQ+ Q +++PT H++A CRVLRYLK NP
Sbjct: 1060 GTPYDDVSGYRRLVGKLLYLNTTRPDIAFATQQLSQFMHAPTNVHYNAACRVLRYLKNNP 1119
Query: 191 GMGLMFPRNFILQLSGFS--------DTRKSVTGYCFF 280
G G++F R+ LQL G+S DTRKS +GYCFF
Sbjct: 1120 GQGVLFSRDSELQLIGYSDADWAGCMDTRKSTSGYCFF 1157
>dbj|GAU36120.1| hypothetical protein TSUD_374830 [Trifolium subterraneum]
Length = 1037
Score = 192 bits (487), Expect(2) = 4e-74
Identities = 90/146 (61%), Positives = 118/146 (80%)
Frame = +3
Query: 276 FFLGSSLISWRTKKQQTVSRSSSEAEYRAMSTAVRELQWLLFLLRDLNISCERPPTLYCD 455
FFLGSSL+SW+ KKQ T+S+SSSEAEYRA+S+A EL WLL+LL+DL+I C + P ++CD
Sbjct: 874 FFLGSSLVSWKAKKQLTISKSSSEAEYRALSSATCELVWLLYLLKDLHIECTQLPVIFCD 933
Query: 456 HQSALHIAANPVFHERTEHLEIDCHFVREKLQEGLMKLLLVPSKGQLADFFTKALTPTNF 635
+QSALHIA+NPVFHERT+H+EIDCH VREK+QEGL++LL V ++ QLAD TKAL F
Sbjct: 934 NQSALHIASNPVFHERTKHIEIDCHLVREKVQEGLLRLLPVSTQDQLADCLTKALPVPKF 993
Query: 636 IPFISKLRMINIYHGQACGGLLKYKN 713
F++KL +++IY ACG +L K+
Sbjct: 994 NHFVTKLGLLDIYQASACGRVLSIKD 1019
Score = 116 bits (290), Expect(2) = 4e-74
Identities = 55/101 (54%), Positives = 72/101 (71%), Gaps = 8/101 (7%)
Frame = +2
Query: 2 DDGGGAYKDTSSYRRLIGRLLYITKTRPDITFAVQQIRQHVNSPTVTHHSAVCRVLRYLK 181
+D G ++D S YRRLIG+LLY+T TRPDI +A QQ+ Q +++PTVTH A CRV+RYLK
Sbjct: 775 NDNGKPFEDVSLYRRLIGKLLYLTNTRPDIAYATQQLSQFLHNPTVTHFKAACRVIRYLK 834
Query: 182 GNPGMGLMFPRNFILQLSGFS--------DTRKSVTGYCFF 280
NPG GLMF R+ + + G+S DTR+S +GYCFF
Sbjct: 835 HNPGRGLMFYRHSDIHIIGYSNADWAGCLDTRRSTSGYCFF 875
>dbj|GAU41486.1| hypothetical protein TSUD_239620 [Trifolium subterraneum]
Length = 794
Score = 186 bits (473), Expect(2) = 4e-74
Identities = 90/140 (64%), Positives = 110/140 (78%)
Frame = +3
Query: 276 FFLGSSLISWRTKKQQTVSRSSSEAEYRAMSTAVRELQWLLFLLRDLNISCERPPTLYCD 455
FFLGSSL+SW+ KKQ TVSRSSSEAEYRA+STA EL WLLFL++DL+I C + P +YCD
Sbjct: 654 FFLGSSLVSWKAKKQLTVSRSSSEAEYRALSTATCELIWLLFLMKDLSIQCSKQPIIYCD 713
Query: 456 HQSALHIAANPVFHERTEHLEIDCHFVREKLQEGLMKLLLVPSKGQLADFFTKALTPTNF 635
QSA+HIA+NPVFHERT+HLEIDCH VREK+Q+GL++LL + + QLAD TK L F
Sbjct: 714 SQSAIHIASNPVFHERTKHLEIDCHLVREKVQQGLLRLLPISTDDQLADCLTKPLAAPKF 773
Query: 636 IPFISKLRMINIYHGQACGG 695
FISKL + +IY + GG
Sbjct: 774 NSFISKLGLFDIYEPKLEGG 793
Score = 121 bits (304), Expect(2) = 4e-74
Identities = 59/101 (58%), Positives = 74/101 (73%), Gaps = 8/101 (7%)
Frame = +2
Query: 2 DDGGGAYKDTSSYRRLIGRLLYITKTRPDITFAVQQIRQHVNSPTVTHHSAVCRVLRYLK 181
+D G Y+D SSYRRLIGRLLY+T TRPDI+FAVQQ+ Q ++ PT+ H +A CRV+RYLK
Sbjct: 555 NDAGKLYEDISSYRRLIGRLLYLTNTRPDISFAVQQLSQFLHKPTMVHFNAACRVVRYLK 614
Query: 182 GNPGMGLMFPRNFILQLSGFSD--------TRKSVTGYCFF 280
NPG GL+F R+ QL GF+D TR+S +GYCFF
Sbjct: 615 HNPGRGLLFSRHSDTQLLGFADADWAGCIETRRSTSGYCFF 655
>gb|AJY78065.1| putative polyprotein [Glycine max]
Length = 523
Score = 197 bits (500), Expect(2) = 6e-74
Identities = 95/140 (67%), Positives = 111/140 (79%)
Frame = +3
Query: 276 FFLGSSLISWRTKKQQTVSRSSSEAEYRAMSTAVRELQWLLFLLRDLNISCERPPTLYCD 455
FF+G SL+SWR KKQ TVSRSSSEAEYRA+S+A ELQWLL+L DL + R PTLYCD
Sbjct: 383 FFIGKSLVSWRAKKQATVSRSSSEAEYRALSSAACELQWLLYLFADLRVQLTRTPTLYCD 442
Query: 456 HQSALHIAANPVFHERTEHLEIDCHFVREKLQEGLMKLLLVPSKGQLADFFTKALTPTNF 635
+QSA+HIA+NPVFHERT+HLEIDCH VREKL +G +KLL V + Q+ADF TKAL P F
Sbjct: 443 NQSAVHIASNPVFHERTKHLEIDCHLVREKLLKGTLKLLPVSTSDQVADFLTKALAPPKF 502
Query: 636 IPFISKLRMINIYHGQACGG 695
F+SKL MINIYH + GG
Sbjct: 503 HDFVSKLSMINIYHDKLEGG 522
Score = 110 bits (276), Expect(2) = 6e-74
Identities = 52/98 (53%), Positives = 66/98 (67%), Gaps = 8/98 (8%)
Frame = +2
Query: 11 GGAYKDTSSYRRLIGRLLYITKTRPDITFAVQQIRQHVNSPTVTHHSAVCRVLRYLKGNP 190
G Y D S YRR++G+LLY+ TRPDI FA QQ+ Q + +PT H +A CRVLRYLK NP
Sbjct: 287 GTPYADISGYRRIVGKLLYLNTTRPDIAFATQQLSQFMQAPTNVHFNAACRVLRYLKNNP 346
Query: 191 GMGLMFPRNFILQLSGFS--------DTRKSVTGYCFF 280
G G+ F R +QL G+S D+RKS++GYCFF
Sbjct: 347 GQGIFFSRTSEMQLIGYSDADWAGCMDSRKSISGYCFF 384
>gb|KHN24193.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
gb|KHN37451.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 234
Score = 197 bits (500), Expect(2) = 1e-73
Identities = 95/140 (67%), Positives = 111/140 (79%)
Frame = +3
Query: 276 FFLGSSLISWRTKKQQTVSRSSSEAEYRAMSTAVRELQWLLFLLRDLNISCERPPTLYCD 455
FF+G SL+SWR KKQ TVSRSSSEAEYRA+S+A ELQWLL+L DL + R PTLYCD
Sbjct: 95 FFIGKSLVSWRAKKQATVSRSSSEAEYRALSSAACELQWLLYLFADLRVQLTRTPTLYCD 154
Query: 456 HQSALHIAANPVFHERTEHLEIDCHFVREKLQEGLMKLLLVPSKGQLADFFTKALTPTNF 635
+QSA+HIA+NPVFHERT+HLEIDCH VREKL +G +KLL V + Q+ADF TKAL P F
Sbjct: 155 NQSAVHIASNPVFHERTKHLEIDCHLVREKLLKGTLKLLPVSTSDQVADFLTKALAPPKF 214
Query: 636 IPFISKLRMINIYHGQACGG 695
F+SKL MINIYH + GG
Sbjct: 215 HDFVSKLSMINIYHDKLEGG 234
Score = 109 bits (273), Expect(2) = 1e-73
Identities = 51/95 (53%), Positives = 65/95 (68%), Gaps = 8/95 (8%)
Frame = +2
Query: 20 YKDTSSYRRLIGRLLYITKTRPDITFAVQQIRQHVNSPTVTHHSAVCRVLRYLKGNPGMG 199
Y D S YRR++G+LLY+ TRPDI FA QQ+ Q + +PT H +A CRVLRYLK NPG G
Sbjct: 2 YADISGYRRIVGKLLYLNTTRPDIAFATQQLSQFMQAPTNVHFNAACRVLRYLKNNPGQG 61
Query: 200 LMFPRNFILQLSGFS--------DTRKSVTGYCFF 280
+ F R +QL G+S D+RKS++GYCFF
Sbjct: 62 IFFSRTSEMQLIGYSDADWAGCMDSRKSISGYCFF 96
>dbj|GAU39523.1| hypothetical protein TSUD_222930 [Trifolium subterraneum]
Length = 1210
Score = 184 bits (467), Expect(2) = 5e-73
Identities = 88/140 (62%), Positives = 110/140 (78%)
Frame = +3
Query: 276 FFLGSSLISWRTKKQQTVSRSSSEAEYRAMSTAVRELQWLLFLLRDLNISCERPPTLYCD 455
FF+GSSLISW+ KKQ TVSRSSSEAEYRA+S+ EL WLL L+ DL I C++PP +YCD
Sbjct: 1070 FFIGSSLISWKAKKQLTVSRSSSEAEYRALSSTTCELIWLLSLINDLKIQCDKPPVIYCD 1129
Query: 456 HQSALHIAANPVFHERTEHLEIDCHFVREKLQEGLMKLLLVPSKGQLADFFTKALTPTNF 635
QSA+HIA+NPVFHERT+HLEIDCH VREK+Q+G+++LL + ++ QLAD TKAL F
Sbjct: 1130 SQSAMHIASNPVFHERTKHLEIDCHLVREKVQQGILRLLPISTQDQLADCLTKALPGPKF 1189
Query: 636 IPFISKLRMINIYHGQACGG 695
ISKL + +IYH + GG
Sbjct: 1190 SSIISKLGLKDIYHPKLEGG 1209
Score = 120 bits (301), Expect(2) = 5e-73
Identities = 58/101 (57%), Positives = 72/101 (71%), Gaps = 8/101 (7%)
Frame = +2
Query: 2 DDGGGAYKDTSSYRRLIGRLLYITKTRPDITFAVQQIRQHVNSPTVTHHSAVCRVLRYLK 181
+D Y D SSYRRL+G+LLY+T TRPDI +A QQ+ Q ++ PT TH++A CRV++YLK
Sbjct: 971 NDDAKPYDDISSYRRLVGKLLYLTNTRPDIAYATQQLSQFLHKPTWTHYNAACRVVKYLK 1030
Query: 182 GNPGMGLMFPRNFILQLSGFS--------DTRKSVTGYCFF 280
NPG GL+FPR LQL GFS DTR+S TGYCFF
Sbjct: 1031 QNPGRGLLFPRASDLQLLGFSDADWAGCVDTRRSTTGYCFF 1071
>dbj|GAU51049.1| hypothetical protein TSUD_371270 [Trifolium subterraneum]
Length = 1001
Score = 182 bits (462), Expect(2) = 1e-72
Identities = 89/140 (63%), Positives = 111/140 (79%)
Frame = +3
Query: 276 FFLGSSLISWRTKKQQTVSRSSSEAEYRAMSTAVRELQWLLFLLRDLNISCERPPTLYCD 455
FF+GSSLISW+ KKQ TVSRSSSEAEYRA+S+ EL WLL L++DL I C++PP +Y D
Sbjct: 861 FFIGSSLISWKAKKQLTVSRSSSEAEYRALSSTTCELIWLLSLMKDLKIECDKPPFIYRD 920
Query: 456 HQSALHIAANPVFHERTEHLEIDCHFVREKLQEGLMKLLLVPSKGQLADFFTKALTPTNF 635
QSA+HIA+NPVFHERT+HLEIDCH VREK+Q+GL+KLL + ++ +LAD TKAL F
Sbjct: 921 SQSAMHIASNPVFHERTKHLEIDCHLVREKVQQGLLKLLPISTQDKLADCLTKALPGPKF 980
Query: 636 IPFISKLRMINIYHGQACGG 695
FISKL + +IYH + GG
Sbjct: 981 NSFISKLGLQDIYHPKLKGG 1000
Score = 120 bits (302), Expect(2) = 1e-72
Identities = 58/101 (57%), Positives = 73/101 (72%), Gaps = 8/101 (7%)
Frame = +2
Query: 2 DDGGGAYKDTSSYRRLIGRLLYITKTRPDITFAVQQIRQHVNSPTVTHHSAVCRVLRYLK 181
+D Y D SSYRRLIG+LLY+T TRPDI +A QQ+ Q ++ PT TH++A CRV++YLK
Sbjct: 762 NDEAKPYADISSYRRLIGKLLYLTNTRPDIAYATQQLSQFLHKPTWTHYNAACRVVKYLK 821
Query: 182 GNPGMGLMFPRNFILQLSGFS--------DTRKSVTGYCFF 280
NPG GL+FPR+ LQ+ GFS DTR+S TGYCFF
Sbjct: 822 QNPGRGLLFPRSSDLQILGFSDADWAGCVDTRRSTTGYCFF 862
>dbj|GAU46985.1| hypothetical protein TSUD_403190 [Trifolium subterraneum]
Length = 1071
Score = 182 bits (463), Expect(2) = 2e-72
Identities = 91/169 (53%), Positives = 121/169 (71%)
Frame = +3
Query: 276 FFLGSSLISWRTKKQQTVSRSSSEAEYRAMSTAVRELQWLLFLLRDLNISCERPPTLYCD 455
FFLGSSLISW+ KKQ T+S+SS EAEYRA+S++ EL WLL+LL+DL I C + P ++CD
Sbjct: 900 FFLGSSLISWKAKKQLTISKSSLEAEYRALSSSTCELIWLLYLLKDLQIECTQLPVIFCD 959
Query: 456 HQSALHIAANPVFHERTEHLEIDCHFVREKLQEGLMKLLLVPSKGQLADFFTKALTPTNF 635
+QSAL+I++NPVFHE T+H+E+DCH VREK+Q GL++LL + ++ QLAD TKAL F
Sbjct: 960 NQSALNISSNPVFHESTKHIELDCHLVREKVQAGLLRLLPISTQDQLADCLTKALPTAKF 1019
Query: 636 IPFISKLRMINIYHGQACGGLLKYKNDDSTGDLSNNSANEDMHKEDSSK 782
FI+KL +++IY ACG LL K S+ SNN + D K
Sbjct: 1020 NHFIAKLGLLDIYQASACGRLLNNKIASSS---SNNYEEASLASNDQVK 1065
Score = 120 bits (300), Expect(2) = 2e-72
Identities = 55/101 (54%), Positives = 74/101 (73%), Gaps = 8/101 (7%)
Frame = +2
Query: 2 DDGGGAYKDTSSYRRLIGRLLYITKTRPDITFAVQQIRQHVNSPTVTHHSAVCRVLRYLK 181
+D G ++D S YRRL+G+LLY+T TRPDI +A QQ+ Q +++PT+TH+ A CRV+RYLK
Sbjct: 801 NDNGKPFEDISLYRRLVGKLLYLTNTRPDIAYATQQLSQFLHNPTITHYKAACRVVRYLK 860
Query: 182 GNPGMGLMFPRNFILQLSGFS--------DTRKSVTGYCFF 280
NPG GLMF RN +Q+ G+S DTR+S +GYCFF
Sbjct: 861 HNPGRGLMFHRNSDIQIIGYSDADWAGCLDTRRSTSGYCFF 901