BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00014416
         (764 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNY07549.1| replication protein A 70 kDa DNA-binding subunit ...   133   5e-32
dbj|GAU39681.1| hypothetical protein TSUD_320930 [Trifolium subt...   132   7e-32
gb|PNY15141.1| replication protein A 70 kDa DNA-binding subunit ...   132   1e-31
gb|PNY14280.1| replication factor A protein [Trifolium pratense]      131   2e-31
dbj|GAU47014.1| hypothetical protein TSUD_403240 [Trifolium subt...   130   2e-30
gb|PNY04276.1| ATP-dependent DNA helicase PIF1, partial [Trifoli...   126   4e-29
ref|XP_013469923.1| replication factor-A carboxy-terminal domain...   125   4e-29
dbj|GAU42995.1| hypothetical protein TSUD_188690 [Trifolium subt...   120   5e-29
ref|XP_003606360.1| DUF223 domain protein [Medicago truncatula] ...   111   2e-25
ref|XP_003589361.1| DUF223 domain protein [Medicago truncatula] ...   110   6e-25
ref|XP_013448488.1| DUF223 domain protein [Medicago truncatula] ...   110   7e-25
ref|XP_003593064.1| DUF223 domain protein [Medicago truncatula] ...   110   9e-25
ref|XP_003592895.1| DUF223 domain protein [Medicago truncatula] ...   110   9e-25
gb|ABE91948.1| Ribosomal protein S2; Nucleic acid-binding, OB-fo...   110   9e-25
ref|XP_003623662.1| DUF223 domain protein [Medicago truncatula] ...   108   5e-24
ref|XP_003622562.1| DUF223 domain protein [Medicago truncatula] ...   106   7e-24
ref|XP_013459721.1| DUF223 domain protein [Medicago truncatula] ...   108   2e-23
ref|XP_013445274.1| DUF223 domain protein [Medicago truncatula] ...   106   2e-23
ref|XP_003626023.1| replication factor-A carboxy-terminal domain...   108   2e-23
ref|XP_003598569.2| nucleic acid-binding,-like fold-protein [Med...   104   3e-23

>gb|PNY07549.1| replication protein A 70 kDa DNA-binding subunit [Trifolium
           pratense]
          Length = 566

 Score =  133 bits (334), Expect = 5e-32
 Identities = 82/253 (32%), Positives = 126/253 (49%)
 Frame = +1

Query: 1   GKVNWRLEVRVIRLWKLPEFNNPPNTNTIETVLLDQNLERIHCTMKNSLVPTFDAVLKEE 180
           GK++++L VRVI LW  P+ +NP     +  + LD++  +I+ T++  L+  F   ++E 
Sbjct: 19  GKIDFQLRVRVINLWSTPDRSNPKEEGALHMIFLDKDCGKIYATVRKDLLSQFKDDIEEG 78

Query: 181 GASELKNLM*RRMIPSFRQLLTDTSCIS*MSRAVIMLKTDRIPLNHFVFTSFPDILAAPK 360
            A  ++  M  +   SF+               +I +K   IP NHF F  F +ILA+ K
Sbjct: 79  AAYVVERFMVGKNDSSFKSTPHKHKLNFMRGTKLIKVKAAEIPPNHFNFMPFDEILASTK 138

Query: 361 EDLIVDVIGHVVEKGDFKLNHKDDNVTKLINLVLEDLEFNRVQCTLWGEL**MPISMALV 540
           ED ++DVIGHVVEK   K   K+  ++KL++  LEDLE NR+ CTLW E     + M   
Sbjct: 139 EDQLLDVIGHVVEKNVMKETEKNGKISKLMDATLEDLEGNRIHCTLWDE---HAVKMQRF 195

Query: 541 LPPHLLLFCSCVR*GDINGIDSLIYFATSAQPFPALFNLFFRSVFQTGIMVISNSFYGTK 720
           L  H                         + P   +  L     +  G M +SNSFYGTK
Sbjct: 196 LDGH-----------------------DPSLPVIIILQLCKLRKY-LGFMGVSNSFYGTK 231

Query: 721 LFIKSDLPAIIDY 759
           LF+ +++P + +Y
Sbjct: 232 LFLNAEMPEVTNY 244


>dbj|GAU39681.1| hypothetical protein TSUD_320930 [Trifolium subterraneum]
          Length = 563

 Score =  132 bits (333), Expect = 7e-32
 Identities = 81/254 (31%), Positives = 121/254 (47%), Gaps = 1/254 (0%)
 Frame = +1

Query: 1   GKVNWRLEVRVIRLWKLPEFNNPPNTNTIETVLLDQNLERIHCTMKNSLVPTFDAVLKEE 180
           GK++++L VRVI LW  P+ NNP     I  + LD++  +IH  ++  L+  F   ++E 
Sbjct: 19  GKIDFQLRVRVINLWATPDRNNPAEDGAINMIFLDKDCGKIHAVVRKDLISQFKDDIEEG 78

Query: 181 GASELKNLM*RRMIPSFRQLLTDTSCIS*MSRAVIMLKTDRIPLNHFVFTSFPDILAAPK 360
            A  ++  M  +   SF+                  +  + IP NHF F  F +ILA  K
Sbjct: 79  AAYVIERFMVAKNDSSFKTTPHKHKLNFMRGTKAFKVTANEIPTNHFNFMPFQEILACTK 138

Query: 361 EDLIVDVIGHVVEKGDFKLNHKDDNVTKLINLVLEDLEFNRVQCTLWGEL**MPISMALV 540
           ED  +DVIGHVVEK   K   K+ N+ K++++ LEDLE +R+ CTLW +     + M   
Sbjct: 139 EDQYLDVIGHVVEKNSLKETEKNGNIHKVMDVTLEDLEGSRIHCTLWAD---YAVKMQQF 195

Query: 541 LPPHLLLFCSCVR*GDINGIDSLIYFATSAQPFPALFNL-FFRSVFQTGIMVISNSFYGT 717
           +  H                        S+ P   +  L   +     G M ISNSFYGT
Sbjct: 196 IDGH-----------------------DSSLPVIMVLQLGKLKKYLGEGSMGISNSFYGT 232

Query: 718 KLFIKSDLPAIIDY 759
           KLF+ + +P +  Y
Sbjct: 233 KLFLNAQIPEVTTY 246


>gb|PNY15141.1| replication protein A 70 kDa DNA-binding subunit [Trifolium
           pratense]
          Length = 565

 Score =  132 bits (331), Expect = 1e-31
 Identities = 79/253 (31%), Positives = 126/253 (49%)
 Frame = +1

Query: 1   GKVNWRLEVRVIRLWKLPEFNNPPNTNTIETVLLDQNLERIHCTMKNSLVPTFDAVLKEE 180
           GK++++++VRVI LW  P+ +NP     +  + LD++  +I+ T++  L+  F   +++ 
Sbjct: 19  GKIDFQMKVRVINLWSTPDRSNPNEQGALHMIFLDKDCGKIYATVRKDLLSQFKDDIEDG 78

Query: 181 GASELKNLM*RRMIPSFRQLLTDTSCIS*MSRAVIMLKTDRIPLNHFVFTSFPDILAAPK 360
            A  ++  M  +   S++               +I +K   IP NHF F  F +ILA+ K
Sbjct: 79  AAYVVERFMVGKNDTSYKSTSHKHKLNFMRGTKMIKVKASDIPANHFDFMPFTEILASAK 138

Query: 361 EDLIVDVIGHVVEKGDFKLNHKDDNVTKLINLVLEDLEFNRVQCTLWGEL**MPISMALV 540
           ED  +DVIGHVVEK   K   K+  ++KL++  +EDLE NR+ CTLW +     I M   
Sbjct: 139 EDQFLDVIGHVVEKNALKETQKNGKISKLMDATIEDLEGNRIHCTLWDD---YAIKMQQF 195

Query: 541 LPPHLLLFCSCVR*GDINGIDSLIYFATSAQPFPALFNLFFRSVFQTGIMVISNSFYGTK 720
           L  H                         + P   +  L     +  G+M +SNSFYGTK
Sbjct: 196 LDGH-----------------------DPSLPVIIILQLCKLKKY-LGVMGVSNSFYGTK 231

Query: 721 LFIKSDLPAIIDY 759
           LF+ +D+P +  Y
Sbjct: 232 LFLNADMPDVASY 244


>gb|PNY14280.1| replication factor A protein [Trifolium pratense]
          Length = 552

 Score =  131 bits (329), Expect = 2e-31
 Identities = 79/254 (31%), Positives = 124/254 (48%), Gaps = 1/254 (0%)
 Frame = +1

Query: 1   GKVNWRLEVRVIRLWKLPEFNNPPNTNTIETVLLDQNLERIHCTMKNSLVPTFDAVLKEE 180
           GK++++L VRVI LW  P+  NP     +  + LD++ E+I+ T++  L+  F   ++E 
Sbjct: 19  GKIDFQLRVRVINLWSTPDRTNPSEDGALHMIFLDKDCEKIYATIRKDLLSQFKDDIEEG 78

Query: 181 GASELKNLM*RRMIPSFRQLLTDTSCIS*MSRAVIMLKTDRIPLNHFVFTSFPDILAAPK 360
            A  ++  M  +   SF+               +I +K   IP NHF F  F +IL + K
Sbjct: 79  AAYVMERFMVAKNDSSFKSTPHKHKLNFMRGTKLIKVKATEIPSNHFNFMPFHEILTSTK 138

Query: 361 EDLIVDVIGHVVEKGDFKLNHKDDNVTKLINLVLEDLEFNRVQCTLWGEL**MPISMALV 540
           ED I+DVIGHVVEK   K + K+  ++K+++  LEDLE NR+ CTLW +           
Sbjct: 139 EDQILDVIGHVVEKNAMKESEKNGKISKVMDATLEDLEGNRIHCTLWDDY---------- 188

Query: 541 LPPHLLLFCSCVR*GDINGIDSLIYFATSAQP-FPALFNLFFRSVFQTGIMVISNSFYGT 717
                               + +  F  S  P  P +       + Q   M +SNSFYG+
Sbjct: 189 -------------------AEKMQRFLDSNDPSLPVII------ILQLCSMGVSNSFYGS 223

Query: 718 KLFIKSDLPAIIDY 759
           KL++ ++LP +  Y
Sbjct: 224 KLYLNAELPDVASY 237


>dbj|GAU47014.1| hypothetical protein TSUD_403240 [Trifolium subterraneum]
          Length = 1765

 Score =  130 bits (326), Expect = 2e-30
 Identities = 84/254 (33%), Positives = 126/254 (49%), Gaps = 1/254 (0%)
 Frame = +1

Query: 1   GKVNWRLEVRVIRLWKLPEFNNPPNTNTIETVLLDQNLERIHCTMKNSLVPTFDAVLKEE 180
           GK++++L VRVI LW  P+ N P     + T+ LD++  +IH  +K  L+  F  V++E 
Sbjct: 92  GKIDFQLRVRVINLWSTPDRNYPAEDGAMHTIFLDKDCGKIHAIVKKDLIFQFKDVIEEG 151

Query: 181 GASELKNLM*RRMIPSFRQLLTDTSCIS*MSRAVIMLKTDRIPLNHFVFTSFPDILAAPK 360
            A  ++  M  +   SF+              +V  +    IP NHF F SF +ILA+ K
Sbjct: 152 AAYVIERFMVAKNDSSFKTTPHKHKLNFMRGTSVFKVTATEIPANHFQFMSFQEILASSK 211

Query: 361 EDLIVDVIGHVVEKGDFKLNHKDDNVTKLINLVLEDLEFNRVQCTLWGEL**MPISMALV 540
           ED  +DVIGHVVEK   K   K+ N+ ++++  LEDLE   + CTLWG+     + M   
Sbjct: 212 EDQYLDVIGHVVEKNVIKETEKNGNIHRVMDATLEDLE---IHCTLWGD---FAVKMQQF 265

Query: 541 LPPHLLLFCSCVR*GDINGIDSLIYFATSAQPFPALFNLFFRSVFQ-TGIMVISNSFYGT 717
                           I+G DS +         P +  L F  + +  G M +SN+FYGT
Sbjct: 266 ----------------IDGHDSTL---------PVIMVLQFGKLKKYLGSMGVSNAFYGT 300

Query: 718 KLFIKSDLPAIIDY 759
           KLF+   +P +  Y
Sbjct: 301 KLFLNGQIPEVAAY 314


>gb|PNY04276.1| ATP-dependent DNA helicase PIF1, partial [Trifolium pratense]
          Length = 2108

 Score =  126 bits (316), Expect = 4e-29
 Identities = 79/253 (31%), Positives = 123/253 (48%)
 Frame = +1

Query: 1   GKVNWRLEVRVIRLWKLPEFNNPPNTNTIETVLLDQNLERIHCTMKNSLVPTFDAVLKEE 180
           GK++++L VRVI LW  P+ +NP     +  + +D++  +I+ T++  L+  F   ++E 
Sbjct: 275 GKIDFQLRVRVINLWSTPDRSNPNEEGALHMIFMDKDCGKIYATVRKDLLSQFKDDIEEG 334

Query: 181 GASELKNLM*RRMIPSFRQLLTDTSCIS*MSRAVIMLKTDRIPLNHFVFTSFPDILAAPK 360
            A  ++  M  +   SF+               +I +K   IP NHF F  F +ILA+ +
Sbjct: 335 AAYVVERFMVGKNDSSFKSTPHKHKLNFMRGTKMIKVKATDIPPNHFNFMPFSEILASTR 394

Query: 361 EDLIVDVIGHVVEKGDFKLNHKDDNVTKLINLVLEDLEFNRVQCTLWGEL**MPISMALV 540
           ED  +DVIGHVVEK   K   K+  ++K+++  LEDLE NR+ CTLW +     + M   
Sbjct: 395 EDQFLDVIGHVVEKNAMKETEKNGKISKVMDATLEDLEGNRIHCTLWDD---HAVKMQRF 451

Query: 541 LPPHLLLFCSCVR*GDINGIDSLIYFATSAQPFPALFNLFFRSVFQTGIMVISNSFYGTK 720
           L  H                         + P   +  L     +    M ISNSFYGTK
Sbjct: 452 LDGH-----------------------DPSLPVIIILQLCKLRKY-LDFMGISNSFYGTK 487

Query: 721 LFIKSDLPAIIDY 759
           LF+ +D+P +  Y
Sbjct: 488 LFLNADMPEVAGY 500


>ref|XP_013469923.1| replication factor-A carboxy-terminal domain protein [Medicago
           truncatula]
 gb|KEH43961.1| replication factor-A carboxy-terminal domain protein [Medicago
           truncatula]
          Length = 566

 Score =  125 bits (313), Expect = 4e-29
 Identities = 77/254 (30%), Positives = 124/254 (48%)
 Frame = +1

Query: 1   GKVNWRLEVRVIRLWKLPEFNNPPNTNTIETVLLDQNLERIHCTMKNSLVPTFDAVLKEE 180
           GK+N +L VRV+ +W + EFNNP   N+I  +LLD  L +I  + K  LVP   + ++E 
Sbjct: 14  GKINIKLRVRVVHVWTVSEFNNPNEDNSIHMLLLDDKLGKIQASAKKHLVPRIRSNVEEG 73

Query: 181 GASELKNLM*RRMIPSFRQLLTDTSCIS*MSRAVIMLKTDRIPLNHFVFTSFPDILAAPK 360
              +++N++  +  P ++            +     +    IPLNHF F  F +IL A +
Sbjct: 74  STYDIENVLVTKNDPKYQVTQHRFKLNLIDNTKFFKIDAATIPLNHFDFMPFNEILEAER 133

Query: 361 EDLIVDVIGHVVEKGDFKLNHKDDNVTKLINLVLEDLEFNRVQCTLWGEL**MPISMALV 540
           E+ +VDVIG VVE+ + K    +   +K+++L L+D E  RV CTLW             
Sbjct: 134 EEKVVDVIGQVVERDELKERDVNGRRSKIMDLTLQDSESRRVHCTLWANY---------- 183

Query: 541 LPPHLLLFCSCVR*GDINGIDSLIYFATSAQPFPALFNLFFRSVFQTGIMVISNSFYGTK 720
                              ++S +     + P   L        +Q GIM +SN+F+GTK
Sbjct: 184 ----------------AERMNSFLAAHDPSSPVIVLIQQCKLKKYQ-GIMGVSNAFFGTK 226

Query: 721 LFIKSDLPAIIDYQ 762
           L ++ DLP  I+++
Sbjct: 227 LLLEGDLPEAIEFK 240


>dbj|GAU42995.1| hypothetical protein TSUD_188690 [Trifolium subterraneum]
          Length = 267

 Score =  120 bits (300), Expect = 5e-29
 Identities = 63/169 (37%), Positives = 94/169 (55%)
 Frame = +1

Query: 1   GKVNWRLEVRVIRLWKLPEFNNPPNTNTIETVLLDQNLERIHCTMKNSLVPTFDAVLKEE 180
           GK++++L VRVI LW  P+  NP +   +  + +D+   RIH T++  L+  F   +++ 
Sbjct: 14  GKIDFQLRVRVINLWTTPDRTNPQDEGVVHMIFMDKECGRIHATIRKDLISKFRDSVEDG 73

Query: 181 GASELKNLM*RRMIPSFRQLLTDTSCIS*MSRAVIMLKTDRIPLNHFVFTSFPDILAAPK 360
            A  L+  M  +   +FR               V  +K   IP NHF F SF DILA+ K
Sbjct: 74  SAYVLERFMVAKNDATFRSTPHKHKLNFMRGTKVFKVKALEIPPNHFEFMSFHDILASTK 133

Query: 361 EDLIVDVIGHVVEKGDFKLNHKDDNVTKLINLVLEDLEFNRVQCTLWGE 507
           +D  +DVIGHVV+K   K   K+  ++K+++  LEDLE NRV CTLW +
Sbjct: 134 DDQFLDVIGHVVKKNVMKETEKNGKISKVMDATLEDLEGNRVHCTLWDD 182


>ref|XP_003606360.1| DUF223 domain protein [Medicago truncatula]
 gb|AES88557.1| DUF223 domain protein [Medicago truncatula]
          Length = 326

 Score =  111 bits (278), Expect = 2e-25
 Identities = 74/256 (28%), Positives = 129/256 (50%), Gaps = 3/256 (1%)
 Frame = +1

Query: 1   GKVNWRLEVRVIRLWKLPEFNNPPNTNTIETVLLDQNLERIHCTMKNSLVPTFDAVLKEE 180
           G+ N ++ VRV  +W + E   P +   +  +L+D+   RIH T +  LV  F ++++E 
Sbjct: 14  GRKNLKMCVRVAHIWLIREKKVPTSIIFMNMLLVDEKGGRIHATARKDLVAKFRSMVQEG 73

Query: 181 GASELKNLM*RRMIPSFRQLLTDTSCIS*MSRAVIM-LKTDRIPLNHFVFTSFPDILAAP 357
           G  +L+N +      S  ++ +    +S M  +    + +  IP+N F F  F +IL++ 
Sbjct: 74  GTYQLENAI-VDFNESPYKVTSHKHKLSMMHNSTFTKVHSLAIPMNVFEFKPFNEILSST 132

Query: 358 KEDLIVDVIGHVVEKGDFKLNHKDDNVTKLINLVLEDLEFNRVQCTLWGEL**MPISMAL 537
            E++  DVIGHV+E+G+ +   KD+  +++I+L LEDLE NR+ C+LWGE          
Sbjct: 133 VEEVYTDVIGHVIERGNIRETEKDERKSRVIDLTLEDLENNRLHCSLWGE---------- 182

Query: 538 VLPPHLLLFCSCVR*GDINGIDSLI-YFATSAQPFPALFNL-FFRSVFQTGIMVISNSFY 711
                               +D ++ +F       P +  L F ++    G+M ++N+F 
Sbjct: 183 -------------------HVDKIVTFFGNHDNDTPTILILQFCKTRMYLGVMGVANAFN 223

Query: 712 GTKLFIKSDLPAIIDY 759
           GTKL +  DLP +  Y
Sbjct: 224 GTKLILNGDLPDVAVY 239


>ref|XP_003589361.1| DUF223 domain protein [Medicago truncatula]
 gb|AES59612.1| DUF223 domain protein [Medicago truncatula]
          Length = 307

 Score =  110 bits (274), Expect = 6e-25
 Identities = 75/255 (29%), Positives = 124/255 (48%), Gaps = 2/255 (0%)
 Frame = +1

Query: 1   GKVNWRLEVRVIRLWKLPEFNNPPNTNTIETVLLDQNLERIHCTMKNSLVPTFDAVLKEE 180
           G+ N ++ VRV  +W + E   P +   +  +L+D+   RIH T +  LV  F ++++E 
Sbjct: 14  GRKNLKMCVRVAHIWLIREKKVPTSIIFMNMLLVDEKGGRIHATARKDLVAKFRSMVQEG 73

Query: 181 GASELKNLM*RRMIPSFRQLLTDTSCIS*MSRAVIM-LKTDRIPLNHFVFTSFPDILAAP 357
           G  +L+N +      S  ++ +    +S M  +    +    IP+N F F  F +IL++ 
Sbjct: 74  GTYQLENAI-VDFNESPYKVTSHKHKLSMMHNSTFTKVHLPAIPMNVFEFKPFNEILSST 132

Query: 358 KEDLIVDVIGHVVEKGDFKLNHKDDNVTKLINLVLEDLEFNRVQCTLWGEL**MPISMAL 537
            E++  DVIGHV+E+GD +   KD   +++I+L LEDLE NR+ C+LWGE          
Sbjct: 133 VEEVSTDVIGHVIERGDIRETEKDRRKSRVIDLTLEDLENNRLHCSLWGE---------- 182

Query: 538 VLPPHLLLFCSCVR*GDINGIDSLIYFATSAQPFPALFNL-FFRSVFQTGIMVISNSFYG 714
                             +G   + +F       P +  L F ++    G M + N+F G
Sbjct: 183 ------------------HGDKIVTFFGNHDNDTPTILILQFCKTRVYLGAMGVVNAFNG 224

Query: 715 TKLFIKSDLPAIIDY 759
           TKL +  DLP +  Y
Sbjct: 225 TKLILNGDLPDVAAY 239


>ref|XP_013448488.1| DUF223 domain protein [Medicago truncatula]
 gb|ABD32456.2| Nucleic acid-binding, OB-fold [Medicago truncatula]
 gb|KEH22515.1| DUF223 domain protein [Medicago truncatula]
          Length = 327

 Score =  110 bits (275), Expect = 7e-25
 Identities = 74/256 (28%), Positives = 128/256 (50%), Gaps = 3/256 (1%)
 Frame = +1

Query: 1   GKVNWRLEVRVIRLWKLPEFNNPPNTNTIETVLLDQNLERIHCTMKNSLVPTFDAVLKEE 180
           G+ N ++ VRV  +W + E   P +   +  +L+D+   RIH T +  LV  F ++++E 
Sbjct: 15  GRKNLKMCVRVAHIWLIREKKVPTSIIFMNMLLVDEKGGRIHATARKDLVAKFRSMVQEG 74

Query: 181 GASELKNLM*RRMIPSFRQLLTDTSCIS*MSRAVIM-LKTDRIPLNHFVFTSFPDILAAP 357
           G  +L+N +      S  ++ +    +S M  +    + +  IP+N F F  F +IL++ 
Sbjct: 75  GTYQLENAI-VDFNESPYKVTSHKHKLSMMHNSTFTKVHSLAIPMNVFEFKPFNEILSST 133

Query: 358 KEDLIVDVIGHVVEKGDFKLNHKDDNVTKLINLVLEDLEFNRVQCTLWGEL**MPISMAL 537
            E++  DVIGHV+E+G+ +   KD   +++I+L LEDLE NR+ C+LWGE          
Sbjct: 134 VEEVYTDVIGHVIERGNIRETEKDGRKSRVIDLTLEDLENNRLHCSLWGE---------- 183

Query: 538 VLPPHLLLFCSCVR*GDINGIDSLI-YFATSAQPFPALFNL-FFRSVFQTGIMVISNSFY 711
                               +D ++ +F       P +  L F ++    G+M ++N+F 
Sbjct: 184 -------------------HVDKIVTFFGNHDNDTPTILILQFCKTRMYLGVMGVANAFN 224

Query: 712 GTKLFIKSDLPAIIDY 759
           GTKL +  DLP +  Y
Sbjct: 225 GTKLILNGDLPDVAVY 240


>ref|XP_003593064.1| DUF223 domain protein [Medicago truncatula]
 ref|XP_003612883.1| DUF223 domain protein [Medicago truncatula]
 gb|AES63315.1| DUF223 domain protein [Medicago truncatula]
 gb|AES95841.1| DUF223 domain protein [Medicago truncatula]
          Length = 326

 Score =  110 bits (274), Expect = 9e-25
 Identities = 75/255 (29%), Positives = 124/255 (48%), Gaps = 2/255 (0%)
 Frame = +1

Query: 1   GKVNWRLEVRVIRLWKLPEFNNPPNTNTIETVLLDQNLERIHCTMKNSLVPTFDAVLKEE 180
           G+ N ++ VRV  +W + E   P +   +  +L+D+   RIH T +  LV  F ++++E 
Sbjct: 14  GRKNLKMCVRVAHIWLIREKKVPTSIIFMNMLLVDEKGGRIHATTRKDLVAKFRSMVQEG 73

Query: 181 GASELKNLM*RRMIPSFRQLLTDTSCIS*MSRAVIM-LKTDRIPLNHFVFTSFPDILAAP 357
           G  +L+N +      S  ++ +    +S M  +    +    IP+N F F  F +IL++ 
Sbjct: 74  GTYQLENAI-VDFNESPYKVTSHKHKLSMMHNSTFTKVHLPAIPMNVFEFKPFNEILSST 132

Query: 358 KEDLIVDVIGHVVEKGDFKLNHKDDNVTKLINLVLEDLEFNRVQCTLWGEL**MPISMAL 537
            E++  DVIGHV+E+GD +   KD   +++I+L LEDLE NR+ C+LWGE          
Sbjct: 133 VEEVSTDVIGHVIERGDIRETEKDRRKSRVIDLTLEDLENNRLHCSLWGE---------- 182

Query: 538 VLPPHLLLFCSCVR*GDINGIDSLIYFATSAQPFPALFNL-FFRSVFQTGIMVISNSFYG 714
                             +G   + +F       P +  L F ++    G M + N+F G
Sbjct: 183 ------------------HGDKIVTFFGNHDNDTPTILILQFCKTRVYLGAMGVVNAFNG 224

Query: 715 TKLFIKSDLPAIIDY 759
           TKL +  DLP +  Y
Sbjct: 225 TKLILNGDLPDVAAY 239


>ref|XP_003592895.1| DUF223 domain protein [Medicago truncatula]
 ref|XP_003593355.1| DUF223 domain protein [Medicago truncatula]
 ref|XP_003614619.1| DUF223 domain protein [Medicago truncatula]
 ref|XP_003616509.1| DUF223 domain protein [Medicago truncatula]
 ref|XP_003617430.1| DUF223 domain protein [Medicago truncatula]
 ref|XP_003620619.1| DUF223 domain protein [Medicago truncatula]
 ref|XP_003621841.1| DUF223 domain protein [Medicago truncatula]
 ref|XP_003599284.2| DUF223 domain protein [Medicago truncatula]
 gb|AES63146.1| DUF223 domain protein [Medicago truncatula]
 gb|AES63606.1| DUF223 domain protein [Medicago truncatula]
 gb|AES76837.1| DUF223 domain protein [Medicago truncatula]
 gb|AES78059.1| DUF223 domain protein [Medicago truncatula]
 gb|AES97577.1| DUF223 domain protein [Medicago truncatula]
 gb|AES99467.1| DUF223 domain protein [Medicago truncatula]
 gb|AET00389.1| DUF223 domain protein [Medicago truncatula]
 gb|AES69535.2| DUF223 domain protein [Medicago truncatula]
          Length = 326

 Score =  110 bits (274), Expect = 9e-25
 Identities = 75/255 (29%), Positives = 124/255 (48%), Gaps = 2/255 (0%)
 Frame = +1

Query: 1   GKVNWRLEVRVIRLWKLPEFNNPPNTNTIETVLLDQNLERIHCTMKNSLVPTFDAVLKEE 180
           G+ N ++ VRV  +W + E   P +   +  +L+D+   RIH T +  LV  F ++++E 
Sbjct: 14  GRKNLKMCVRVAHIWLIREKKVPTSIIFMNMLLVDEKGGRIHATARKDLVAKFRSMVQEG 73

Query: 181 GASELKNLM*RRMIPSFRQLLTDTSCIS*MSRAVIM-LKTDRIPLNHFVFTSFPDILAAP 357
           G  +L+N +      S  ++ +    +S M  +    +    IP+N F F  F +IL++ 
Sbjct: 74  GTYQLENAI-VDFNESPYKVTSHKHKLSMMHNSTFTKVHLPAIPMNVFEFKPFNEILSST 132

Query: 358 KEDLIVDVIGHVVEKGDFKLNHKDDNVTKLINLVLEDLEFNRVQCTLWGEL**MPISMAL 537
            E++  DVIGHV+E+GD +   KD   +++I+L LEDLE NR+ C+LWGE          
Sbjct: 133 VEEVSTDVIGHVIERGDIRETEKDRRKSRVIDLTLEDLENNRLHCSLWGE---------- 182

Query: 538 VLPPHLLLFCSCVR*GDINGIDSLIYFATSAQPFPALFNL-FFRSVFQTGIMVISNSFYG 714
                             +G   + +F       P +  L F ++    G M + N+F G
Sbjct: 183 ------------------HGDKIVTFFGNHDNDTPTILILQFCKTRVYLGAMGVVNAFNG 224

Query: 715 TKLFIKSDLPAIIDY 759
           TKL +  DLP +  Y
Sbjct: 225 TKLILNGDLPDVAAY 239


>gb|ABE91948.1| Ribosomal protein S2; Nucleic acid-binding, OB-fold [Medicago
           truncatula]
          Length = 327

 Score =  110 bits (274), Expect = 9e-25
 Identities = 75/255 (29%), Positives = 124/255 (48%), Gaps = 2/255 (0%)
 Frame = +1

Query: 1   GKVNWRLEVRVIRLWKLPEFNNPPNTNTIETVLLDQNLERIHCTMKNSLVPTFDAVLKEE 180
           G+ N ++ VRV  +W + E   P +   +  +L+D+   RIH T +  LV  F ++++E 
Sbjct: 15  GRKNLKMCVRVAHIWLIREKKVPTSIIFMNMLLVDEKGGRIHATARKDLVAKFRSMVQEG 74

Query: 181 GASELKNLM*RRMIPSFRQLLTDTSCIS*MSRAVIM-LKTDRIPLNHFVFTSFPDILAAP 357
           G  +L+N +      S  ++ +    +S M  +    +    IP+N F F  F +IL++ 
Sbjct: 75  GTYQLENAI-VDFNESPYKVTSHKHKLSMMHNSTFTKVHLPAIPMNVFEFKPFNEILSST 133

Query: 358 KEDLIVDVIGHVVEKGDFKLNHKDDNVTKLINLVLEDLEFNRVQCTLWGEL**MPISMAL 537
            E++  DVIGHV+E+GD +   KD   +++I+L LEDLE NR+ C+LWGE          
Sbjct: 134 VEEVSTDVIGHVIERGDIRETEKDRRKSRVIDLTLEDLENNRLHCSLWGE---------- 183

Query: 538 VLPPHLLLFCSCVR*GDINGIDSLIYFATSAQPFPALFNL-FFRSVFQTGIMVISNSFYG 714
                             +G   + +F       P +  L F ++    G M + N+F G
Sbjct: 184 ------------------HGDKIVTFFGNHDNDTPTILILQFCKTRVYLGAMGVVNAFNG 225

Query: 715 TKLFIKSDLPAIIDY 759
           TKL +  DLP +  Y
Sbjct: 226 TKLILNGDLPDVAAY 240


>ref|XP_003623662.1| DUF223 domain protein [Medicago truncatula]
 gb|AES79880.1| DUF223 domain protein [Medicago truncatula]
          Length = 326

 Score =  108 bits (269), Expect = 5e-24
 Identities = 73/255 (28%), Positives = 123/255 (48%), Gaps = 2/255 (0%)
 Frame = +1

Query: 1   GKVNWRLEVRVIRLWKLPEFNNPPNTNTIETVLLDQNLERIHCTMKNSLVPTFDAVLKEE 180
           G+ N ++ VRV  +W + E   P +   +  +L+D+   RIH T +  LV  F  +++E 
Sbjct: 14  GRKNLKMCVRVAHIWLIRENKVPTSIIFMNMLLVDEKGGRIHATARKDLVAKFRCMVQEG 73

Query: 181 GASELKNLM*RRMIPSFRQLLTDTSCIS*MSRAVIM-LKTDRIPLNHFVFTSFPDILAAP 357
           G  +L+N +      S  +  ++   +S M  +    + +  IP+N F F  F +IL++ 
Sbjct: 74  GTYQLENAI-VGFNESHYKATSNKHKLSMMHNSTFTKVHSPAIPMNVFEFKPFNEILSST 132

Query: 358 KEDLIVDVIGHVVEKGDFKLNHKDDNVTKLINLVLEDLEFNRVQCTLWGEL**MPISMAL 537
            E++   VIGHV+E+GD +   KD   +++I+L LEDLE NR+ C+LWGE          
Sbjct: 133 VEEVSTAVIGHVIERGDIRETEKDGRKSRVIDLTLEDLENNRLHCSLWGE---------- 182

Query: 538 VLPPHLLLFCSCVR*GDINGIDSLIYFATSAQPFPALFNL-FFRSVFQTGIMVISNSFYG 714
                             +    + +F       P +  L F ++    G M ++N+F G
Sbjct: 183 ------------------HADKIVTFFGNHDNDTPTILILQFCKTRMYLGAMGVANAFNG 224

Query: 715 TKLFIKSDLPAIIDY 759
           TKL +  DLP +  Y
Sbjct: 225 TKLILNGDLPDVAAY 239


>ref|XP_003622562.1| DUF223 domain protein [Medicago truncatula]
 ref|XP_003619996.2| DUF223 domain protein [Medicago truncatula]
 gb|AES78780.1| DUF223 domain protein [Medicago truncatula]
 gb|AES76214.2| DUF223 domain protein [Medicago truncatula]
          Length = 258

 Score =  106 bits (264), Expect = 7e-24
 Identities = 61/170 (35%), Positives = 99/170 (58%), Gaps = 1/170 (0%)
 Frame = +1

Query: 1   GKVNWRLEVRVIRLWKLPEFNNPPNTNTIETVLLDQNLERIHCTMKNSLVPTFDAVLKEE 180
           GK + +L V V  +W + +  NP +   +  +L+++   RIH T++  LVPT   +++E 
Sbjct: 14  GKKDIKLIVHVAHIWLICDKENPDDIIFMNMMLVEEKRGRIHATVRKYLVPTIQKMVEEG 73

Query: 181 GASELKNLM*RRMIPSFRQLLTDTSCIS*MSRA-VIMLKTDRIPLNHFVFTSFPDILAAP 357
           G  +L+N+M       +R LL     +S M+ A    +    IP N F F +F DIL + 
Sbjct: 74  GTYKLENVMVGFNKGQYR-LLPHKHKLSMMNNARFAKVNAPNIPRNVFEFMAFKDILLSH 132

Query: 358 KEDLIVDVIGHVVEKGDFKLNHKDDNVTKLINLVLEDLEFNRVQCTLWGE 507
           +ED + DVIGHVVE+   +   K++  + +I+L+LEDLE +R+ C+LWGE
Sbjct: 133 EEDKVADVIGHVVERDSLRETEKNERKSLVIDLMLEDLEHSRIHCSLWGE 182


>ref|XP_013459721.1| DUF223 domain protein [Medicago truncatula]
 gb|KEH33752.1| DUF223 domain protein [Medicago truncatula]
          Length = 453

 Score =  108 bits (270), Expect = 2e-23
 Identities = 77/254 (30%), Positives = 120/254 (47%), Gaps = 1/254 (0%)
 Frame = +1

Query: 1   GKVNWRLEVRVIRLWKLPEFNNPPNTNTIETVLLDQNLERIHCTMKNSLVPTFDAVLKEE 180
           GK+N +L VRVI LW +P+F+ P   N I  +L+D+ L +I  T K +L+P   +++++ 
Sbjct: 14  GKINIKLHVRVINLWTVPDFSRPTEDNFIHLLLIDEKLGKIQATAKKTLIPKIRSLVQDG 73

Query: 181 GASELKNLM*RRMIPSFRQLLTDTSCIS*MSRAVIMLKTDRIPLNHFVFTSFPDILAAPK 360
            A E++N++       +R                  +  + IP+ HF F  F +IL + K
Sbjct: 74  EAYEIQNVLVAHNEIRYRCTGHRWKLNMIDQTKFTKIDCNTIPVYHFEFVPFKEILESTK 133

Query: 361 EDLIVDVIGHVVEKGDFKLNHKDDNVTKLINLVLEDLEFNRVQCTLWGEL**MPISMALV 540
           ED  VDVIG VVE+   K        + ++++ LED E NR+ C+LW       I M   
Sbjct: 134 EDRHVDVIGRVVERDSLKEKEVLGKKSMVLDITLEDSEGNRIHCSLWDT---YAIRMDAY 190

Query: 541 LPPHLLLFCSCVR*GDINGIDSLIYFATSAQPFPALFNLF-FRSVFQTGIMVISNSFYGT 717
           L  H           D N             P   + +L   +  + T  M ISN+FYGT
Sbjct: 191 LTVH-----------DPN------------SPVIVVIHLCKLKKYYST--MGISNAFYGT 225

Query: 718 KLFIKSDLPAIIDY 759
           KL +  D P + ++
Sbjct: 226 KLILDDDHPVVKEF 239


>ref|XP_013445274.1| DUF223 domain protein [Medicago truncatula]
 gb|KEH19300.1| DUF223 domain protein [Medicago truncatula]
          Length = 306

 Score =  106 bits (264), Expect = 2e-23
 Identities = 73/247 (29%), Positives = 119/247 (48%), Gaps = 2/247 (0%)
 Frame = +1

Query: 25  VRVIRLWKLPEFNNPPNTNTIETVLLDQNLERIHCTMKNSLVPTFDAVLKEEGASELKNL 204
           VRV  +W + E   P +   +  +L+D+   RIH T +  LV  F ++++E G  +L+N 
Sbjct: 3   VRVAHIWLIREKKVPTSIIFMNMLLVDEKGGRIHATARKDLVAKFRSMVQEGGTYQLENA 62

Query: 205 M*RRMIPSFRQLLTDTSCIS*MSRAVIM-LKTDRIPLNHFVFTSFPDILAAPKEDLIVDV 381
           +      S  ++ +    +S M  +    +    IP+N F F  F +IL++  E++  DV
Sbjct: 63  I-VDFNESPYKVTSHKHKLSMMHNSTFTKVHLPAIPMNVFEFKPFNEILSSTVEEVSTDV 121

Query: 382 IGHVVEKGDFKLNHKDDNVTKLINLVLEDLEFNRVQCTLWGEL**MPISMALVLPPHLLL 561
           IGHV+E+GD +   KD   +++I+L LEDLE NR+ C+LWGE                  
Sbjct: 122 IGHVIERGDIRETEKDRRKSRVIDLTLEDLENNRLHCSLWGE------------------ 163

Query: 562 FCSCVR*GDINGIDSLIYFATSAQPFPALFNL-FFRSVFQTGIMVISNSFYGTKLFIKSD 738
                     +G   + +F       P +  L F ++    G M + N+F GTKL +  D
Sbjct: 164 ----------HGDKIVTFFGNHDNDTPTILILQFCKTRVYLGAMGVVNAFNGTKLILNGD 213

Query: 739 LPAIIDY 759
           LP +  Y
Sbjct: 214 LPDVAAY 220


>ref|XP_003626023.1| replication factor-A carboxy-terminal domain protein [Medicago
           truncatula]
 gb|AES82241.1| replication factor-A carboxy-terminal domain protein [Medicago
           truncatula]
          Length = 526

 Score =  108 bits (271), Expect = 2e-23
 Identities = 77/261 (29%), Positives = 120/261 (45%), Gaps = 8/261 (3%)
 Frame = +1

Query: 1   GKVNWRLEVRVIRLWKLPEFNNPPNTNTIETVLLDQNLERIHCTMKNSLVPTFDAVLKEE 180
           GK+N +L VRVI LW +P+F+ P   N I  +L+D+ L +I  T K +L+P   +++++ 
Sbjct: 14  GKINIKLRVRVINLWTVPDFSRPTEDNFIHLLLMDEKLGKIQATAKKTLIPKIRSLVQDG 73

Query: 181 GASELKNLM*RRMIPSFR--------QLLTDTSCIS*MSRAVIMLKTDRIPLNHFVFTSF 336
            A E++N++       +R         L+  T            +  + IP  HF F  F
Sbjct: 74  AAYEIQNVLVAHNEIRYRCTGHRWKLNLIDQTK--------FTKIDCNTIPEYHFEFVPF 125

Query: 337 PDILAAPKEDLIVDVIGHVVEKGDFKLNHKDDNVTKLINLVLEDLEFNRVQCTLWGEL** 516
            +IL + KED  VDVIG VVE+   K        + ++++ LED E NR+ C+LW     
Sbjct: 126 KEILESTKEDRHVDVIGRVVERDSLKEKEVLGKKSMVLDITLEDTEGNRIHCSLWDT--- 182

Query: 517 MPISMALVLPPHLLLFCSCVR*GDINGIDSLIYFATSAQPFPALFNLFFRSVFQTGIMVI 696
             I M   L  H           D N    ++      + + A              M I
Sbjct: 183 YAIRMDAYLTVH-----------DPNSPVIVVIHLCKLKKYYA-------------TMGI 218

Query: 697 SNSFYGTKLFIKSDLPAIIDY 759
           SN+FYGTKL +  D P + ++
Sbjct: 219 SNAFYGTKLILDDDHPVVKEF 239


>ref|XP_003598569.2| nucleic acid-binding,-like fold-protein [Medicago truncatula]
 gb|AES68820.2| nucleic acid-binding,-like fold-protein [Medicago truncatula]
          Length = 242

 Score =  104 bits (259), Expect = 3e-23
 Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 1/254 (0%)
 Frame = +1

Query: 1   GKVNWRLEVRVIRLWKLPEFNNPPNTNTIETVLLDQNLERIHCTMKNSLVPTFDAVLKEE 180
           G+ N ++ VRV  +W + +   P +   +  +L+D+     H T +  LV  F ++++E 
Sbjct: 14  GRKNLKMCVRVAHIWLIRDKKVPTSIIFMNMLLVDEKGGCFHATARKDLVAKFRSMVQEG 73

Query: 181 GASELKNLM*RRMIPSFRQLLTDTSCIS*MSRAVIMLKTDRIPLNHFVFTSFPDILAAPK 360
           G  +L+N +       ++            +     + +  IP+N F F  F  IL++  
Sbjct: 74  GTYQLENAIVGFNESPYKVTSHKHKLSMMHTSTFTKVHSPAIPMNVFEFKPFNGILSSTV 133

Query: 361 EDLIVDVIGHVVEKGDFKLNHKDDNVTKLINLVLEDLEFNRVQCTLWGEL**MPISMALV 540
           E++  DVIGHV+E+GD +   KD   +++I+L LEDLE NR+ C+LWGE           
Sbjct: 134 EEVSTDVIGHVIERGDIRETEKDGRKSRVIDLTLEDLENNRLHCSLWGE----------- 182

Query: 541 LPPHLLLFCSCVR*GDINGIDSLIYFATSAQPFPALFNL-FFRSVFQTGIMVISNSFYGT 717
                            +    + +F       P +  L F ++    G+M ++++F GT
Sbjct: 183 -----------------HADKIVTFFGNHDNDTPTILILQFCKTRMYLGVMGVADAFNGT 225

Query: 718 KLFIKSDLPAIIDY 759
           KL +  DLP ++ Y
Sbjct: 226 KLILNGDLPDVVAY 239