BLASTX nr result
ID: Astragalus24_contig00014386
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Astragalus24_contig00014386 (1311 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|PNX92852.1| hypothetical protein L195_g015995, partial [Trifo... 349 0.0 gb|PNY15195.1| ribonuclease H, partial [Trifolium pratense] 343 0.0 gb|PNX93226.1| ribonuclease H, partial [Trifolium pratense] 321 e-164 gb|PNX92765.1| ribonuclease H [Trifolium pratense] 324 e-163 gb|PNX93586.1| ribonuclease H, partial [Trifolium pratense] 317 e-162 gb|PNX92520.1| ribonuclease H, partial [Trifolium pratense] 317 e-159 gb|PNX92714.1| ribonuclease H [Trifolium pratense] 314 e-154 gb|PNX92211.1| ribonuclease H, partial [Trifolium pratense] 299 e-154 gb|PNY05589.1| ribonuclease H [Trifolium pratense] 299 e-154 dbj|GAU51664.1| hypothetical protein TSUD_268670 [Trifolium subt... 300 e-148 gb|PNY14401.1| ribonuclease H [Trifolium pratense] 293 e-148 gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas... 295 e-146 dbj|GAU41508.1| hypothetical protein TSUD_302460 [Trifolium subt... 307 e-143 dbj|GAU12283.1| hypothetical protein TSUD_141910 [Trifolium subt... 327 e-139 dbj|GAU20604.1| hypothetical protein TSUD_33400 [Trifolium subte... 300 e-139 gb|KYP32780.1| LINE-1 reverse transcriptase isogeny [Cajanus cajan] 275 e-137 dbj|GAU33809.1| hypothetical protein TSUD_221470, partial [Trifo... 251 e-130 gb|PNY01679.1| ribonuclease H, partial [Trifolium pratense] 243 e-127 gb|PNY14872.1| ribonuclease H, partial [Trifolium pratense] 245 e-125 gb|PNY00178.1| retrotransposon-related protein, partial [Trifoli... 353 e-125 >gb|PNX92852.1| hypothetical protein L195_g015995, partial [Trifolium pratense] Length = 664 Score = 349 bits (896), Expect(2) = 0.0 Identities = 169/211 (80%), Positives = 185/211 (87%) Frame = -1 Query: 633 LIKPVTKEEVSHTLSHMHSFKAPSPDGFQTMFFKQYWHIVGDDITHLISEAFVTGTFNSS 454 L K VTK+EV+ L+ MH FKAP PDGFQ +FFKQYWHIVGDD+THL+S AF TG F S Sbjct: 436 LSKQVTKDEVTQALNQMHPFKAPGPDGFQGIFFKQYWHIVGDDVTHLVSVAFETGEFPQS 495 Query: 453 LSVTLIALIPKVDCPQNFKEFRPISLCNTIYKLITKIMVNRLRPLLDQIVGPFQSSFLPG 274 LS TLIALIPKVDCP+NFKEFRPISLCNTIYKLITKI+VNRLRP L+QIVGPFQSSFLPG Sbjct: 496 LSETLIALIPKVDCPKNFKEFRPISLCNTIYKLITKILVNRLRPFLNQIVGPFQSSFLPG 555 Query: 273 KGTCDDAIILQEAIHTMRRSKRKKGDMVFKIDLEKAYDNVRWDFLEFCLHHNGFPTITTK 94 KGT D+AIILQE IH+MR+SKRKKGDMVFKIDLEKAYDNV W+FL+FCL NGFP IT K Sbjct: 556 KGTTDNAIILQEVIHSMRKSKRKKGDMVFKIDLEKAYDNVSWEFLQFCLQQNGFPPITIK 615 Query: 93 LIMHCVTSSSLSIIWNGKRLQNFNPTRGLRQ 1 LIM+CV+SSSLSIIWNG RL F PTRGLRQ Sbjct: 616 LIMYCVSSSSLSIIWNGCRLPCFTPTRGLRQ 646 Score = 343 bits (880), Expect(2) = 0.0 Identities = 155/230 (67%), Positives = 190/230 (82%) Frame = -2 Query: 1310 VEVSITGGKFTWNRPCSGQRNVFRKLDRALADIPWCLAFPDAFVEVLSKFHSDHNPLLLQ 1131 +++ TGG FTWNR CSG R VFRKLDRA+AD+PWC+AFPDA+VEVL KFHSDHNPLLL+ Sbjct: 178 MDIKTTGGIFTWNRTCSGNRMVFRKLDRAIADVPWCMAFPDAYVEVLCKFHSDHNPLLLR 237 Query: 1130 CGERPQAYGPRPFRFEAVWLTHLDYHKVVQAAWNKDFSDPVNALHNVQKDSIIFNKDTFG 951 CG +GPRPFRFEA W+TH +YH +V++AW K+ D VN+L VQ++SI FNK +FG Sbjct: 238 CGRPLTNHGPRPFRFEAAWITHPNYHDIVKSAWGKNTGDIVNSLQEVQQESINFNKVSFG 297 Query: 950 NIHRRKAIIERRLKGIQLALERMDVARLVYLDRELRLEYDKIFAQEEIHWYQKSRENWIK 771 NI +RK IERRLKGIQ +LER+D ARLVYL R+L+ EYD I +QEEIHW+QK+R++WIK Sbjct: 298 NIRKRKERIERRLKGIQSSLERVDSARLVYLQRDLQKEYDIILSQEEIHWFQKARDDWIK 357 Query: 770 LGDRNTKYFHAKTVIRRKRNKVHGLHLPNGIWCDDDVTLREEQSSH*SNL 621 LGDRNTK+FH KT+IRRKRNK+HGLHLPNGIWC DD TL++E + NL Sbjct: 358 LGDRNTKFFHTKTIIRRKRNKIHGLHLPNGIWCTDDSTLKDEAQYYFKNL 407 >gb|PNY15195.1| ribonuclease H, partial [Trifolium pratense] Length = 1142 Score = 343 bits (879), Expect(2) = 0.0 Identities = 164/215 (76%), Positives = 185/215 (86%) Frame = -1 Query: 645 AKQSLIKPVTKEEVSHTLSHMHSFKAPSPDGFQTMFFKQYWHIVGDDITHLISEAFVTGT 466 A QSL VT++EV+ L+ MH FKAP PDGFQ +FFKQYWHIVGDD+ +IS AF TG+ Sbjct: 372 AYQSLSSQVTRDEVTQALNQMHPFKAPGPDGFQGIFFKQYWHIVGDDVVRIISTAFDTGS 431 Query: 465 FNSSLSVTLIALIPKVDCPQNFKEFRPISLCNTIYKLITKIMVNRLRPLLDQIVGPFQSS 286 F+ S+S TLIALIPKVDCP NFKE RPISLCNT+YKLITKIMVNRLRP L+QIVGPFQSS Sbjct: 432 FHPSISETLIALIPKVDCPNNFKELRPISLCNTVYKLITKIMVNRLRPHLNQIVGPFQSS 491 Query: 285 FLPGKGTCDDAIILQEAIHTMRRSKRKKGDMVFKIDLEKAYDNVRWDFLEFCLHHNGFPT 106 FLPGKGT D+AIILQEAIH+MR+SKRKKGDMVFKIDLEKAYDNV W+FLEFCL NGFP Sbjct: 492 FLPGKGTTDNAIILQEAIHSMRKSKRKKGDMVFKIDLEKAYDNVNWEFLEFCLQRNGFPP 551 Query: 105 ITTKLIMHCVTSSSLSIIWNGKRLQNFNPTRGLRQ 1 KLIM CV+SSS+SI+WNG+RL NF PT+GLRQ Sbjct: 552 TIIKLIMFCVSSSSMSIMWNGRRLPNFTPTKGLRQ 586 Score = 330 bits (846), Expect(2) = 0.0 Identities = 148/229 (64%), Positives = 183/229 (79%) Frame = -2 Query: 1310 VEVSITGGKFTWNRPCSGQRNVFRKLDRALADIPWCLAFPDAFVEVLSKFHSDHNPLLLQ 1131 V++ +TGG FTWNRPC+G R V+R+LDRALAD+ W +AF DA+VEVL KFHSDHNPL+L+ Sbjct: 118 VDIGMTGGSFTWNRPCTGNRMVYRRLDRALADVSWRMAFSDAYVEVLCKFHSDHNPLILR 177 Query: 1130 CGERPQAYGPRPFRFEAVWLTHLDYHKVVQAAWNKDFSDPVNALHNVQKDSIIFNKDTFG 951 CG GPRPFRFEA W+TH +Y +VQ AW K + ++ LHNVQ+DS+ FN + FG Sbjct: 178 CGIPLHNDGPRPFRFEAAWITHPNYSDIVQTAWGKSPDNFISCLHNVQQDSLRFNTEIFG 237 Query: 950 NIHRRKAIIERRLKGIQLALERMDVARLVYLDRELRLEYDKIFAQEEIHWYQKSRENWIK 771 NI +RK IERRLKGIQ LER+D ARL+Y+ REL+ EYD I QEEIHWYQK+R++WIK Sbjct: 238 NIRKRKNQIERRLKGIQQTLERIDSARLIYIQRELQQEYDTILGQEEIHWYQKARDDWIK 297 Query: 770 LGDRNTKYFHAKTVIRRKRNKVHGLHLPNGIWCDDDVTLREEQSSH*SN 624 LGDRNTK+FH KT+IRRKRNK+HGLHLPNGIWC+DD LR+E ++ N Sbjct: 298 LGDRNTKFFHTKTIIRRKRNKIHGLHLPNGIWCNDDTILRQEAQTYFKN 346 >gb|PNX93226.1| ribonuclease H, partial [Trifolium pratense] Length = 851 Score = 321 bits (823), Expect(2) = e-164 Identities = 148/212 (69%), Positives = 180/212 (84%) Frame = -1 Query: 636 SLIKPVTKEEVSHTLSHMHSFKAPSPDGFQTMFFKQYWHIVGDDITHLISEAFVTGTFNS 457 +L++ ++KEEV L+ MH KAP PDGFQ +FF++YWHI+G+DI +L+S+AF TG FN Sbjct: 384 TLLQQISKEEVLAALNQMHPLKAPGPDGFQGVFFRRYWHIIGEDIYNLVSQAFNTGYFNP 443 Query: 456 SLSVTLIALIPKVDCPQNFKEFRPISLCNTIYKLITKIMVNRLRPLLDQIVGPFQSSFLP 277 SL+ TLI LIPK+DCP++FK+FRPISLCNT+YKLITK++VNRLRP+LD I+GPFQSSFLP Sbjct: 444 SLAETLICLIPKIDCPKHFKDFRPISLCNTLYKLITKVLVNRLRPMLDSIIGPFQSSFLP 503 Query: 276 GKGTCDDAIILQEAIHTMRRSKRKKGDMVFKIDLEKAYDNVRWDFLEFCLHHNGFPTITT 97 G+GTCD+AIILQE IH M +SK KKGD+ FKIDLEKAYDNV W++L CL GFP I Sbjct: 504 GRGTCDNAIILQEIIHHMNKSKSKKGDVAFKIDLEKAYDNVNWNYLRSCLLDFGFPPIII 563 Query: 96 KLIMHCVTSSSLSIIWNGKRLQNFNPTRGLRQ 1 KLIMHCV+SSSLS+IWNGKRL NF PTRGLRQ Sbjct: 564 KLIMHCVSSSSLSLIWNGKRLPNFTPTRGLRQ 595 Score = 288 bits (738), Expect(2) = e-164 Identities = 126/230 (54%), Positives = 180/230 (78%) Frame = -2 Query: 1310 VEVSITGGKFTWNRPCSGQRNVFRKLDRALADIPWCLAFPDAFVEVLSKFHSDHNPLLLQ 1131 ++++ GGKFTW+R C GQR++ +KLDR +A++ W L+FP+AF+E L + +SDHNP+LL+ Sbjct: 128 IDLNCVGGKFTWHRNCRGQRSIAKKLDRGMANLSWRLSFPEAFLETLCRSNSDHNPILLR 187 Query: 1130 CGERPQAYGPRPFRFEAVWLTHLDYHKVVQAAWNKDFSDPVNALHNVQKDSIIFNKDTFG 951 CG P A G +PFRFEA W++H +Y +V++ AW+K+ PV AL+ +++DSIIFNK+ FG Sbjct: 188 CGGLPIARGAKPFRFEAAWMSHSEYEQVIKNAWSKERGAPVAALNAIKEDSIIFNKEVFG 247 Query: 950 NIHRRKAIIERRLKGIQLALERMDVARLVYLDRELRLEYDKIFAQEEIHWYQKSRENWIK 771 NI +RK +E RL+GIQ ++ER+D ARL+ L+ +L+ E DK+ QEE+ WYQKSRE W+K Sbjct: 248 NIFQRKRNLENRLRGIQRSMERVDSARLIMLEHQLQEELDKVLYQEELLWYQKSREKWVK 307 Query: 770 LGDRNTKYFHAKTVIRRKRNKVHGLHLPNGIWCDDDVTLREEQSSH*SNL 621 GD+NTK+FHA+T+IRRKRNK+HGL LP G WC DD+ L+EE ++ NL Sbjct: 308 FGDKNTKFFHAQTIIRRKRNKIHGLTLPCGAWCTDDIILQEEANNFFKNL 357 >gb|PNX92765.1| ribonuclease H [Trifolium pratense] Length = 1310 Score = 324 bits (831), Expect(2) = e-163 Identities = 151/212 (71%), Positives = 179/212 (84%) Frame = -1 Query: 636 SLIKPVTKEEVSHTLSHMHSFKAPSPDGFQTMFFKQYWHIVGDDITHLISEAFVTGTFNS 457 +L + VTKEEV L+ MH K+P PDGFQ +FF++YWHI+G+DI +I++AF TG FN Sbjct: 385 ALTQEVTKEEVYQALNQMHPLKSPGPDGFQGVFFRRYWHIMGEDIYTMINQAFSTGHFNP 444 Query: 456 SLSVTLIALIPKVDCPQNFKEFRPISLCNTIYKLITKIMVNRLRPLLDQIVGPFQSSFLP 277 SL+ TLI LIPKVDCP NFKEFRPISLCNT+YKLITK++VNRLRP+LD I+GPFQSSFLP Sbjct: 445 SLAETLICLIPKVDCPNNFKEFRPISLCNTLYKLITKVLVNRLRPMLDSIIGPFQSSFLP 504 Query: 276 GKGTCDDAIILQEAIHTMRRSKRKKGDMVFKIDLEKAYDNVRWDFLEFCLHHNGFPTITT 97 G+GTCD+AIILQE IH+MR+SK KKGD+ +KIDLEKAYDNV W +L CL GFP IT Sbjct: 505 GRGTCDNAIILQEIIHSMRKSKSKKGDVAYKIDLEKAYDNVDWSYLRSCLRDFGFPPITI 564 Query: 96 KLIMHCVTSSSLSIIWNGKRLQNFNPTRGLRQ 1 KLIMHCV+SSSLS+IWNG RL NF+PTRGLRQ Sbjct: 565 KLIMHCVSSSSLSLIWNGNRLPNFSPTRGLRQ 596 Score = 281 bits (720), Expect(2) = e-163 Identities = 124/230 (53%), Positives = 173/230 (75%) Frame = -2 Query: 1310 VEVSITGGKFTWNRPCSGQRNVFRKLDRALADIPWCLAFPDAFVEVLSKFHSDHNPLLLQ 1131 V+++ GGKFTW+R C G+R++ KLDR + ++ W L FP+A++E L + +SDHNP++L+ Sbjct: 128 VDLNSVGGKFTWHRNCRGERSIANKLDRGMTNLQWRLIFPEAYLETLCRSNSDHNPIILR 187 Query: 1130 CGERPQAYGPRPFRFEAVWLTHLDYHKVVQAAWNKDFSDPVNALHNVQKDSIIFNKDTFG 951 CG P A G RPFRFEA W++H DY VV++AW K+ P++ALH +++DSIIFNK+ FG Sbjct: 188 CGGLPIARGTRPFRFEAAWMSHSDYENVVESAWTKERGCPISALHTIKEDSIIFNKEVFG 247 Query: 950 NIHRRKAIIERRLKGIQLALERMDVARLVYLDRELRLEYDKIFAQEEIHWYQKSRENWIK 771 NI ++K +E RLKGIQ +ER+D RL+ L+++L+ E D++ QEE+ WYQKSRE WIK Sbjct: 248 NIFKKKRNLEDRLKGIQQTMERVDSVRLILLEQQLQQELDQVLYQEEMLWYQKSREKWIK 307 Query: 770 LGDRNTKYFHAKTVIRRKRNKVHGLHLPNGIWCDDDVTLREEQSSH*SNL 621 GD+NTK+FHA+T+IRRKRNK+HGL LP G WC +D L+EE NL Sbjct: 308 FGDKNTKFFHAQTIIRRKRNKIHGLTLPCGSWCTEDSILQEEALKFFKNL 357 >gb|PNX93586.1| ribonuclease H, partial [Trifolium pratense] Length = 953 Score = 317 bits (813), Expect(2) = e-162 Identities = 141/230 (61%), Positives = 183/230 (79%) Frame = -2 Query: 1310 VEVSITGGKFTWNRPCSGQRNVFRKLDRALADIPWCLAFPDAFVEVLSKFHSDHNPLLLQ 1131 V+++ TG K+TW R C GQR +F+KLDR +A++PW LAFP+A+VEVL + HSDH+PLLL+ Sbjct: 223 VDIATTGNKYTWARNCMGQRRIFKKLDRGIANLPWQLAFPEAYVEVLCRLHSDHHPLLLR 282 Query: 1130 CGERPQAYGPRPFRFEAVWLTHLDYHKVVQAAWNKDFSDPVNALHNVQKDSIIFNKDTFG 951 CG+ PQ GPRPFRFEA W+TH +Y VVQ AW++ P+ L+ V+ DS+IFN + FG Sbjct: 283 CGQLPQRRGPRPFRFEAAWITHPEYQNVVQTAWSQTTPCPIAGLNQVKTDSLIFNSNVFG 342 Query: 950 NIHRRKAIIERRLKGIQLALERMDVARLVYLDRELRLEYDKIFAQEEIHWYQKSRENWIK 771 NI +K I+E+R+KGIQL+LER+D ARLVYL+ +L+L+YD+I AQEE+ WYQKSR+ WIK Sbjct: 343 NIRHQKHILEKRIKGIQLSLERVDSARLVYLEHDLQLQYDRILAQEELLWYQKSRDKWIK 402 Query: 770 LGDRNTKYFHAKTVIRRKRNKVHGLHLPNGIWCDDDVTLREEQSSH*SNL 621 LGDRNTK+FHA TVIRRKRNK+HGLHLP G+WC DD L++E NL Sbjct: 403 LGDRNTKFFHATTVIRRKRNKIHGLHLPCGMWCTDDNILKDEAQKFFKNL 452 Score = 285 bits (728), Expect(2) = e-162 Identities = 130/183 (71%), Positives = 162/183 (88%) Frame = -1 Query: 549 QTMFFKQYWHIVGDDITHLISEAFVTGTFNSSLSVTLIALIPKVDCPQNFKEFRPISLCN 370 +T+ ++YWHIVG+D+ +L+ +AF +GTFNS + TLIALIPKVD PQNFKEFRPISLCN Sbjct: 484 KTVTREEYWHIVGEDVYNLVCQAFASGTFNSCIGETLIALIPKVDYPQNFKEFRPISLCN 543 Query: 369 TIYKLITKIMVNRLRPLLDQIVGPFQSSFLPGKGTCDDAIILQEAIHTMRRSKRKKGDMV 190 TIYKLITK++VNRLRP LDQI+GP+QSSFLPG+GTCD+AI+LQE IH+M++SK+KKGD+V Sbjct: 544 TIYKLITKVLVNRLRPYLDQIIGPYQSSFLPGRGTCDNAIVLQEVIHSMKKSKKKKGDVV 603 Query: 189 FKIDLEKAYDNVRWDFLEFCLHHNGFPTITTKLIMHCVTSSSLSIIWNGKRLQNFNPTRG 10 +KIDLEKAYD+V W+FL CL GFP IT LIMHCV++SSLS+IWNG+RL +F+PTRG Sbjct: 604 YKIDLEKAYDHVNWEFLRSCLIQFGFPPITITLIMHCVSASSLSLIWNGQRLPSFSPTRG 663 Query: 9 LRQ 1 LRQ Sbjct: 664 LRQ 666 >gb|PNX92520.1| ribonuclease H, partial [Trifolium pratense] Length = 865 Score = 317 bits (811), Expect(2) = e-159 Identities = 148/213 (69%), Positives = 179/213 (84%) Frame = -1 Query: 639 QSLIKPVTKEEVSHTLSHMHSFKAPSPDGFQTMFFKQYWHIVGDDITHLISEAFVTGTFN 460 Q+L+ V+KEEV L+ MH KAP PDGFQ +FF+QYWHI+G+DI ++SEAF TG FN Sbjct: 362 QTLLHHVSKEEVFIALNQMHPLKAPGPDGFQGVFFRQYWHILGNDICDMVSEAFATGQFN 421 Query: 459 SSLSVTLIALIPKVDCPQNFKEFRPISLCNTIYKLITKIMVNRLRPLLDQIVGPFQSSFL 280 SL+ TLI LIPK DCP++FK+FRPISLCNT+YKLITKI+VNRLRP+LD IVGPFQSSFL Sbjct: 422 PSLAETLICLIPKEDCPKHFKDFRPISLCNTLYKLITKILVNRLRPMLDSIVGPFQSSFL 481 Query: 279 PGKGTCDDAIILQEAIHTMRRSKRKKGDMVFKIDLEKAYDNVRWDFLEFCLHHNGFPTIT 100 PG+GT D+AIILQE I+ M +SK KKGD+ +KIDLEKAYDNV W++L CLH GFP +T Sbjct: 482 PGRGTSDNAIILQEVIYNMNKSKAKKGDVAYKIDLEKAYDNVDWNYLRSCLHDFGFPPLT 541 Query: 99 TKLIMHCVTSSSLSIIWNGKRLQNFNPTRGLRQ 1 KLIMHCV SS+LS+IWNG+RL +F+PTRGLRQ Sbjct: 542 IKLIMHCVCSSTLSLIWNGQRLPSFSPTRGLRQ 574 Score = 276 bits (707), Expect(2) = e-159 Identities = 122/230 (53%), Positives = 171/230 (74%) Frame = -2 Query: 1310 VEVSITGGKFTWNRPCSGQRNVFRKLDRALADIPWCLAFPDAFVEVLSKFHSDHNPLLLQ 1131 ++++ GGKFTW+R C GQR++ +KLDR +A++ W L FP+AF+E L + +SDHNP+LL+ Sbjct: 107 LDLNSVGGKFTWHRNCRGQRSISKKLDRGMANVTWRLNFPEAFLETLCRVNSDHNPILLR 166 Query: 1130 CGERPQAYGPRPFRFEAVWLTHLDYHKVVQAAWNKDFSDPVNALHNVQKDSIIFNKDTFG 951 CG P A G RPFRFEA W++H DY ++V+ AW ++ P+ L+ +++DSI+FNK+ FG Sbjct: 167 CGGLPIARGARPFRFEAAWISHSDYEQLVKNAWTRERGLPIAGLNTIREDSILFNKEVFG 226 Query: 950 NIHRRKAIIERRLKGIQLALERMDVARLVYLDRELRLEYDKIFAQEEIHWYQKSRENWIK 771 NI ++K +E RL GIQ +ER+D RL+ L+++L+ E D + QEE+ W+QKSRE WIK Sbjct: 227 NIFKKKRKLENRLNGIQRVMERVDSTRLILLEQQLQKELDDVLYQEELLWFQKSREKWIK 286 Query: 770 LGDRNTKYFHAKTVIRRKRNKVHGLHLPNGIWCDDDVTLREEQSSH*SNL 621 GDRNTK+FHA+TVIRRKRNK+HG+ LP G WC DD L+EE NL Sbjct: 287 FGDRNTKFFHAQTVIRRKRNKIHGITLPCGAWCTDDTILQEEAKKIFKNL 336 >gb|PNX92714.1| ribonuclease H [Trifolium pratense] Length = 1359 Score = 314 bits (805), Expect(2) = e-154 Identities = 146/212 (68%), Positives = 176/212 (83%) Frame = -1 Query: 636 SLIKPVTKEEVSHTLSHMHSFKAPSPDGFQTMFFKQYWHIVGDDITHLISEAFVTGTFNS 457 +L K VTKEEV+ L+ M FKAP PDGFQ +FFKQYWHIVGDDI +L+ AF TG F+S Sbjct: 433 NLTKDVTKEEVTLALNSMKPFKAPGPDGFQCIFFKQYWHIVGDDIYNLVKNAFATGHFDS 492 Query: 456 SLSVTLIALIPKVDCPQNFKEFRPISLCNTIYKLITKIMVNRLRPLLDQIVGPFQSSFLP 277 +S TLIALIPKVD P FKE RPISLCN +YK+ITK++VNRLRP+LD ++GPFQSSFLP Sbjct: 493 KISETLIALIPKVDPPTTFKELRPISLCNIVYKIITKVLVNRLRPMLDNLIGPFQSSFLP 552 Query: 276 GKGTCDDAIILQEAIHTMRRSKRKKGDMVFKIDLEKAYDNVRWDFLEFCLHHNGFPTITT 97 G+GT D+AI+LQE +H MR+SK+KKGD+ FK+DLEKA+DNV W FL+ CL+ GFPTITT Sbjct: 553 GRGTSDNAIVLQEVVHYMRKSKKKKGDVAFKLDLEKAFDNVNWTFLKNCLNDFGFPTITT 612 Query: 96 KLIMHCVTSSSLSIIWNGKRLQNFNPTRGLRQ 1 LIMHCVTSS+LSI+WNG R+ +F PT GLRQ Sbjct: 613 NLIMHCVTSSNLSILWNGNRMPSFKPTHGLRQ 644 Score = 262 bits (670), Expect(2) = e-154 Identities = 119/222 (53%), Positives = 162/222 (72%) Frame = -2 Query: 1310 VEVSITGGKFTWNRPCSGQRNVFRKLDRALADIPWCLAFPDAFVEVLSKFHSDHNPLLLQ 1131 ++++ TGG+FTW+R G R++ +KLDR ++++ W LAFP+AFV++L +FHSDHNP+ L+ Sbjct: 177 LDLTTTGGRFTWHRNTQGTRSLSKKLDRGISNVEWRLAFPEAFVDILCRFHSDHNPIFLR 236 Query: 1130 CGERPQAYGPRPFRFEAVWLTHLDYHKVVQAAWNKDFSDPVNALHNVQKDSIIFNKDTFG 951 G P A GPRPFRFEA W+ H DY VV+ AW +PV AL V+ +SI FN + FG Sbjct: 237 FGGLPLARGPRPFRFEAAWIDHDDYSSVVERAWCYSNHNPVTALQLVRDNSIKFNHEVFG 296 Query: 950 NIHRRKAIIERRLKGIQLALERMDVARLVYLDRELRLEYDKIFAQEEIHWYQKSRENWIK 771 NI ++K IE RLKGIQ LER+D A V+L+ +L+ EY+ I QEEIHWYQKSRE W+K Sbjct: 297 NIFQKKKHIEARLKGIQKYLERVDSAHHVHLEYQLQQEYNHILFQEEIHWYQKSREQWVK 356 Query: 770 LGDRNTKYFHAKTVIRRKRNKVHGLHLPNGIWCDDDVTLREE 645 GD+N+ +FHA+T+IRRKRNK+H + LP GIW D ++ E Sbjct: 357 FGDKNSSFFHAQTIIRRKRNKIHNIQLPTGIWSSDSSIIQHE 398 >gb|PNX92211.1| ribonuclease H, partial [Trifolium pratense] Length = 1462 Score = 299 bits (766), Expect(2) = e-154 Identities = 137/208 (65%), Positives = 172/208 (82%) Frame = -1 Query: 624 PVTKEEVSHTLSHMHSFKAPSPDGFQTMFFKQYWHIVGDDITHLISEAFVTGTFNSSLSV 445 P+TKEEV+ L+ M +KAP PDGFQ +FFKQYWHIVGDDI HL+ AF TG F+ ++S Sbjct: 652 PITKEEVTAALNSMKPYKAPGPDGFQCIFFKQYWHIVGDDIFHLVKIAFSTGYFDPNISN 711 Query: 444 TLIALIPKVDCPQNFKEFRPISLCNTIYKLITKIMVNRLRPLLDQIVGPFQSSFLPGKGT 265 TLI+LIPKV+ + +K+FRPISLCN +YK+ITK++V+RLRP+L++I+GPFQSSFLPG+GT Sbjct: 712 TLISLIPKVEPTKTYKDFRPISLCNIVYKIITKVLVHRLRPILEKIIGPFQSSFLPGRGT 771 Query: 264 CDDAIILQEAIHTMRRSKRKKGDMVFKIDLEKAYDNVRWDFLEFCLHHNGFPTITTKLIM 85 D+AI+LQE IH MRRSK+KKG + FK+DLEKA+DNV WDFLE CLH GFP IT +LIM Sbjct: 772 SDNAIVLQEIIHFMRRSKKKKGYVAFKLDLEKAFDNVNWDFLENCLHDFGFPEITIRLIM 831 Query: 84 HCVTSSSLSIIWNGKRLQNFNPTRGLRQ 1 HCVTS + SI+WNG ++ F PT GLRQ Sbjct: 832 HCVTSPTYSILWNGNQMPQFKPTHGLRQ 859 Score = 275 bits (703), Expect(2) = e-154 Identities = 132/230 (57%), Positives = 171/230 (74%) Frame = -2 Query: 1310 VEVSITGGKFTWNRPCSGQRNVFRKLDRALADIPWCLAFPDAFVEVLSKFHSDHNPLLLQ 1131 +++S TGG+FTW+R +G R + +KLDR LA++ W LAFP+AFVEVL + HSDHNPLLL+ Sbjct: 392 LDLSTTGGRFTWHRNHNGLRILSKKLDRGLANVTWRLAFPEAFVEVLCRLHSDHNPLLLR 451 Query: 1130 CGERPQAYGPRPFRFEAVWLTHLDYHKVVQAAWNKDFSDPVNALHNVQKDSIIFNKDTFG 951 G P A GPRPFRFEA W+ H DY +VV AW +PV AL NV+++SI FN++TFG Sbjct: 452 FGGLPLARGPRPFRFEAAWIDHEDYSEVVDRAWKSANHNPVLALTNVRENSITFNQETFG 511 Query: 950 NIHRRKAIIERRLKGIQLALERMDVARLVYLDRELRLEYDKIFAQEEIHWYQKSRENWIK 771 NI +RK IERRL+GIQ LER+D R V L++EL+ +Y+ I QEE+ WYQKSRE W+K Sbjct: 512 NIFKRKKHIERRLRGIQNYLERVDSTRHVILEKELQHQYNHILFQEEMLWYQKSREQWVK 571 Query: 770 LGDRNTKYFHAKTVIRRKRNKVHGLHLPNGIWCDDDVTLREEQSSH*SNL 621 GD+N+ +FHA+T+IRRK+NKVH + LPNGIW D V L+EE NL Sbjct: 572 FGDKNSSFFHAQTIIRRKKNKVHRIQLPNGIWTTDSVILQEEAQKIFKNL 621 >gb|PNY05589.1| ribonuclease H [Trifolium pratense] Length = 1360 Score = 299 bits (766), Expect(2) = e-154 Identities = 137/208 (65%), Positives = 172/208 (82%) Frame = -1 Query: 624 PVTKEEVSHTLSHMHSFKAPSPDGFQTMFFKQYWHIVGDDITHLISEAFVTGTFNSSLSV 445 P+TKEEV+ L+ M +KAP PDGFQ +FFKQYWHIVGDDI HL+ AF TG F+ ++S Sbjct: 437 PITKEEVTAALNSMKPYKAPGPDGFQCIFFKQYWHIVGDDIFHLVKIAFSTGYFDPNISN 496 Query: 444 TLIALIPKVDCPQNFKEFRPISLCNTIYKLITKIMVNRLRPLLDQIVGPFQSSFLPGKGT 265 TLI+LIPKV+ + +K+FRPISLCN +YK+ITK++V+RLRP+L++I+GPFQSSFLPG+GT Sbjct: 497 TLISLIPKVEPTKTYKDFRPISLCNIVYKIITKVLVHRLRPILEKIIGPFQSSFLPGRGT 556 Query: 264 CDDAIILQEAIHTMRRSKRKKGDMVFKIDLEKAYDNVRWDFLEFCLHHNGFPTITTKLIM 85 D+AI+LQE IH MRRSK+KKG + FK+DLEKA+DNV WDFLE CLH GFP IT +LIM Sbjct: 557 SDNAIVLQEIIHFMRRSKKKKGYVAFKLDLEKAFDNVNWDFLENCLHDFGFPEITIRLIM 616 Query: 84 HCVTSSSLSIIWNGKRLQNFNPTRGLRQ 1 HCVTS + SI+WNG ++ F PT GLRQ Sbjct: 617 HCVTSPTYSILWNGNQMPQFKPTHGLRQ 644 Score = 275 bits (703), Expect(2) = e-154 Identities = 132/230 (57%), Positives = 171/230 (74%) Frame = -2 Query: 1310 VEVSITGGKFTWNRPCSGQRNVFRKLDRALADIPWCLAFPDAFVEVLSKFHSDHNPLLLQ 1131 +++S TGG+FTW+R +G R + +KLDR LA++ W LAFP+AFVEVL + HSDHNPLLL+ Sbjct: 177 LDLSTTGGRFTWHRNHNGLRILSKKLDRGLANVTWRLAFPEAFVEVLCRLHSDHNPLLLR 236 Query: 1130 CGERPQAYGPRPFRFEAVWLTHLDYHKVVQAAWNKDFSDPVNALHNVQKDSIIFNKDTFG 951 G P A GPRPFRFEA W+ H DY +VV AW +PV AL NV+++SI FN++TFG Sbjct: 237 FGGLPLARGPRPFRFEAAWIDHEDYSEVVDRAWKSANHNPVLALTNVRENSITFNQETFG 296 Query: 950 NIHRRKAIIERRLKGIQLALERMDVARLVYLDRELRLEYDKIFAQEEIHWYQKSRENWIK 771 NI +RK IERRL+GIQ LER+D R V L++EL+ +Y+ I QEE+ WYQKSRE W+K Sbjct: 297 NIFKRKKHIERRLRGIQNYLERVDSTRHVILEKELQHQYNHILFQEEMLWYQKSREQWVK 356 Query: 770 LGDRNTKYFHAKTVIRRKRNKVHGLHLPNGIWCDDDVTLREEQSSH*SNL 621 GD+N+ +FHA+T+IRRK+NKVH + LPNGIW D V L+EE NL Sbjct: 357 FGDKNSSFFHAQTIIRRKKNKVHRIQLPNGIWTTDSVILQEEAQKIFKNL 406 >dbj|GAU51664.1| hypothetical protein TSUD_268670 [Trifolium subterraneum] Length = 1231 Score = 300 bits (767), Expect(2) = e-148 Identities = 140/214 (65%), Positives = 174/214 (81%) Frame = -1 Query: 642 KQSLIKPVTKEEVSHTLSHMHSFKAPSPDGFQTMFFKQYWHIVGDDITHLISEAFVTGTF 463 K SL +PVTKEEV+ L+ M +KAP PDGFQ +FFKQYWHIVGDDI +L+ AF +G F Sbjct: 458 KTSLTRPVTKEEVTIALNSMKPYKAPGPDGFQCIFFKQYWHIVGDDIFNLVKSAFHSGYF 517 Query: 462 NSSLSVTLIALIPKVDCPQNFKEFRPISLCNTIYKLITKIMVNRLRPLLDQIVGPFQSSF 283 + ++S TLIALIPK+D P FK+FRPISLCN +YK+ITK++V+RLRPLLD I+GP+QSSF Sbjct: 518 DPTISETLIALIPKIDPPSTFKDFRPISLCNIVYKIITKVLVHRLRPLLDSIIGPYQSSF 577 Query: 282 LPGKGTCDDAIILQEAIHTMRRSKRKKGDMVFKIDLEKAYDNVRWDFLEFCLHHNGFPTI 103 L G+GT ++AI+LQE IH MRRSK+KKG + FK+DLEKA+DNV W FL+ CL GFP I Sbjct: 578 LLGRGTSNNAIVLQEIIHFMRRSKKKKGYVAFKLDLEKAFDNVNWSFLQSCLQDFGFPDI 637 Query: 102 TTKLIMHCVTSSSLSIIWNGKRLQNFNPTRGLRQ 1 TT+LIMHCVTSS+ SI+WNG ++ F PT GLRQ Sbjct: 638 TTQLIMHCVTSSTYSILWNGNKMPPFKPTHGLRQ 671 Score = 257 bits (656), Expect(2) = e-148 Identities = 124/229 (54%), Positives = 162/229 (70%) Frame = -2 Query: 1307 EVSITGGKFTWNRPCSGQRNVFRKLDRALADIPWCLAFPDAFVEVLSKFHSDHNPLLLQC 1128 +++ TG FTW+R +G R + +KLDR LA++ W LAFP+AFVE+L +FHSDHNPLLL+ Sbjct: 205 DLTTTGSNFTWHRNHNGFRILSKKLDRGLANVEWRLAFPEAFVEILCRFHSDHNPLLLRF 264 Query: 1127 GERPQAYGPRPFRFEAVWLTHLDYHKVVQAAWNKDFSDPVNALHNVQKDSIIFNKDTFGN 948 G P A GPRPFRFEA W+ H DY +V AW + V AL+NV+ DSI FN + FGN Sbjct: 265 GGLPLASGPRPFRFEAAWIDHKDYSALVDQAWKSSNHNIVIALNNVRLDSISFNHEVFGN 324 Query: 947 IHRRKAIIERRLKGIQLALERMDVARLVYLDRELRLEYDKIFAQEEIHWYQKSRENWIKL 768 I +RK IE RLKGIQ+ LER+D V L++EL+ EY+ I QEE+ YQKSRE W K Sbjct: 325 IFKRKRHIESRLKGIQIYLERVDSLHHVLLEKELQREYNHILFQEEMLSYQKSREQWAKF 384 Query: 767 GDRNTKYFHAKTVIRRKRNKVHGLHLPNGIWCDDDVTLREEQSSH*SNL 621 GD+N+ +FHA+T+IRRKRN++H L LPNGIW D L++E + N+ Sbjct: 385 GDKNSSFFHAQTIIRRKRNRIHRLQLPNGIWTSDSSILQQEAQHYYKNV 433 >gb|PNY14401.1| ribonuclease H [Trifolium pratense] Length = 1359 Score = 293 bits (751), Expect(2) = e-148 Identities = 137/212 (64%), Positives = 167/212 (78%) Frame = -1 Query: 636 SLIKPVTKEEVSHTLSHMHSFKAPSPDGFQTMFFKQYWHIVGDDITHLISEAFVTGTFNS 457 +L P+TK+EV+ L+ M FKAP PDGF +FFKQYWHIVGDDI HL+ AF +G F+ Sbjct: 433 ALTCPITKDEVTAALNSMKPFKAPGPDGFHCIFFKQYWHIVGDDIFHLVKTAFSSGYFDH 492 Query: 456 SLSVTLIALIPKVDCPQNFKEFRPISLCNTIYKLITKIMVNRLRPLLDQIVGPFQSSFLP 277 ++S TLIALIPK+D P+ FK+FRPISLCN +YKLITK++V+RLRP LD I+GPFQSSFLP Sbjct: 493 NISNTLIALIPKIDTPKTFKDFRPISLCNIVYKLITKVLVHRLRPFLDNIIGPFQSSFLP 552 Query: 276 GKGTCDDAIILQEAIHTMRRSKRKKGDMVFKIDLEKAYDNVRWDFLEFCLHHNGFPTITT 97 G+GT D+AI+LQE IH M+RS+ K G FK+DLEKA+DNV WDFL CL GFP IT Sbjct: 553 GRGTSDNAIVLQEIIHFMKRSRNKNGYAAFKLDLEKAFDNVNWDFLRNCLIDFGFPDITV 612 Query: 96 KLIMHCVTSSSLSIIWNGKRLQNFNPTRGLRQ 1 +LIMHCVTS + SI+WNG +L F PT GLRQ Sbjct: 613 RLIMHCVTSPTYSILWNGTQLPPFTPTHGLRQ 644 Score = 260 bits (665), Expect(2) = e-148 Identities = 125/229 (54%), Positives = 165/229 (72%) Frame = -2 Query: 1310 VEVSITGGKFTWNRPCSGQRNVFRKLDRALADIPWCLAFPDAFVEVLSKFHSDHNPLLLQ 1131 ++++ TGG+FTW+R +G R + +KLDR LA+I W LAFP+AF+EVL + HSDHNPLLL+ Sbjct: 177 LDLTTTGGRFTWHRNHNGLRILSKKLDRGLANISWRLAFPEAFIEVLCRLHSDHNPLLLR 236 Query: 1130 CGERPQAYGPRPFRFEAVWLTHLDYHKVVQAAWNKDFSDPVNALHNVQKDSIIFNKDTFG 951 G P A GPRPFRFEA W+ H DY +VV AW + AL+N + SI FN++ FG Sbjct: 237 FGGLPTAAGPRPFRFEAAWINHEDYAEVVDRAWQSANHNLPLALNNARDFSITFNREIFG 296 Query: 950 NIHRRKAIIERRLKGIQLALERMDVARLVYLDRELRLEYDKIFAQEEIHWYQKSRENWIK 771 NI +RK IERRL+GIQ LER+D R V L++EL+ +Y+ I QEE+ WYQKSRE WIK Sbjct: 297 NIFQRKKHIERRLQGIQKYLERVDSTRHVLLEKELQNQYNNILFQEEMLWYQKSREQWIK 356 Query: 770 LGDRNTKYFHAKTVIRRKRNKVHGLHLPNGIWCDDDVTLREEQSSH*SN 624 GD+N+ +FHA+T+IRR+RNK+H L LPNG W D TL++E + N Sbjct: 357 FGDKNSSFFHAQTIIRRRRNKIHRLQLPNGTWSTDCATLQDEAQLYFKN 405 >gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H [Medicago truncatula] Length = 1296 Score = 295 bits (755), Expect(2) = e-146 Identities = 133/214 (62%), Positives = 171/214 (79%) Frame = -1 Query: 642 KQSLIKPVTKEEVSHTLSHMHSFKAPSPDGFQTMFFKQYWHIVGDDITHLISEAFVTGTF 463 K SL P+TK+EV L+ M +KAP PDGF +FFKQYWHIVGDD+ HL+ AF+TG F Sbjct: 424 KTSLTSPITKKEVFAALNSMKPYKAPGPDGFHCIFFKQYWHIVGDDVFHLVRSAFLTGHF 483 Query: 462 NSSLSVTLIALIPKVDCPQNFKEFRPISLCNTIYKLITKIMVNRLRPLLDQIVGPFQSSF 283 + ++S TLIALIPK+D P +K+FRPISLCNT+YK+ITK++V+RLRP L+ ++GP+QSSF Sbjct: 484 DPAISNTLIALIPKIDSPNTYKDFRPISLCNTLYKIITKVLVHRLRPFLNNLIGPYQSSF 543 Query: 282 LPGKGTCDDAIILQEAIHTMRRSKRKKGDMVFKIDLEKAYDNVRWDFLEFCLHHNGFPTI 103 LPG+GT D++IILQE +H M+RSKRKKG + FK+DLEKA+DNV WDFL CL GFP I Sbjct: 544 LPGRGTADNSIILQEILHFMKRSKRKKGYVAFKLDLEKAFDNVNWDFLNSCLLDFGFPDI 603 Query: 102 TTKLIMHCVTSSSLSIIWNGKRLQNFNPTRGLRQ 1 KLIMHCV+S++ S++WNG ++ F PT GLRQ Sbjct: 604 IVKLIMHCVSSANYSLLWNGNKMPPFKPTHGLRQ 637 Score = 254 bits (648), Expect(2) = e-146 Identities = 121/222 (54%), Positives = 162/222 (72%) Frame = -2 Query: 1310 VEVSITGGKFTWNRPCSGQRNVFRKLDRALADIPWCLAFPDAFVEVLSKFHSDHNPLLLQ 1131 ++++ TGG+FTW++ +G R + +KLDR +A++ W L+FP+AFVEVL + HSDHNPLLL+ Sbjct: 170 LDLTTTGGRFTWHKNNNGIRILSKKLDRGMANVDWRLSFPEAFVEVLCRLHSDHNPLLLR 229 Query: 1130 CGERPQAYGPRPFRFEAVWLTHLDYHKVVQAAWNKDFSDPVNALHNVQKDSIIFNKDTFG 951 G P GPRPFRFEA W+ H DY VV+ +W+ +P +L V ++SIIFN D FG Sbjct: 230 FGGLPLTRGPRPFRFEAAWIDHYDYGNVVKRSWSTHTHNPTASLIKVMENSIIFNHDVFG 289 Query: 950 NIHRRKAIIERRLKGIQLALERMDVARLVYLDRELRLEYDKIFAQEEIHWYQKSRENWIK 771 NI +RK+ +E RLKG+Q LER+D R L++EL+ EY+ I QEE+ WYQKSRE W+K Sbjct: 290 NIFQRKSRVEWRLKGVQSYLERVDSYRHTLLEKELQDEYNHILFQEEMLWYQKSREQWVK 349 Query: 770 LGDRNTKYFHAKTVIRRKRNKVHGLHLPNGIWCDDDVTLREE 645 LGD+NT +FHA+TVIRRK NK+H L LPNGI D L+EE Sbjct: 350 LGDKNTAFFHAQTVIRRKWNKIHKLQLPNGISTSDSNILQEE 391 >dbj|GAU41508.1| hypothetical protein TSUD_302460 [Trifolium subterraneum] Length = 1075 Score = 307 bits (787), Expect(2) = e-143 Identities = 140/214 (65%), Positives = 176/214 (82%) Frame = -1 Query: 642 KQSLIKPVTKEEVSHTLSHMHSFKAPSPDGFQTMFFKQYWHIVGDDITHLISEAFVTGTF 463 + SL KPVTKEEV+ L+ M +KAP PDGFQ +FFKQYWH+VGDDI L+ AF TG F Sbjct: 223 RNSLSKPVTKEEVTAALNSMKPYKAPGPDGFQCIFFKQYWHLVGDDIFDLVKTAFHTGYF 282 Query: 462 NSSLSVTLIALIPKVDCPQNFKEFRPISLCNTIYKLITKIMVNRLRPLLDQIVGPFQSSF 283 + ++S TLI+LIPK+D P +++FRPISLCN +YK+ITK++V+RLRP+LD I+GP+QSSF Sbjct: 283 DPTISDTLISLIPKIDSPTTYRDFRPISLCNIVYKIITKVLVHRLRPILDSIIGPYQSSF 342 Query: 282 LPGKGTCDDAIILQEAIHTMRRSKRKKGDMVFKIDLEKAYDNVRWDFLEFCLHHNGFPTI 103 LPG+GT D+AI+LQE IH MRRSKRKKG + FK+DLEKA+DNV WDFL+ CLH GFP I Sbjct: 343 LPGRGTSDNAIVLQEIIHFMRRSKRKKGFVAFKLDLEKAFDNVNWDFLKSCLHDFGFPNI 402 Query: 102 TTKLIMHCVTSSSLSIIWNGKRLQNFNPTRGLRQ 1 T +LIMHCVTSS+ S++WNG +L +F PT GLRQ Sbjct: 403 TIRLIMHCVTSSNFSLLWNGNKLPSFKPTHGLRQ 436 Score = 232 bits (591), Expect(2) = e-143 Identities = 110/196 (56%), Positives = 139/196 (70%) Frame = -2 Query: 1208 WCLAFPDAFVEVLSKFHSDHNPLLLQCGERPQAYGPRPFRFEAVWLTHLDYHKVVQAAWN 1029 W LAFP+AFVEVL +FHSDHNPL L+ G P GPRPFRFEA W+ H DY +V+ AWN Sbjct: 3 WRLAFPEAFVEVLCRFHSDHNPLFLRFGGLPITRGPRPFRFEAAWIDHKDYSTLVERAWN 62 Query: 1028 KDFSDPVNALHNVQKDSIIFNKDTFGNIHRRKAIIERRLKGIQLALERMDVARLVYLDRE 849 + V AL+ V+ DSI FN + FGNI RRK IE RLKG+Q LER+D V L++E Sbjct: 63 SSNHNIVTALNTVKHDSINFNHEVFGNIFRRKRHIESRLKGVQSYLERVDSLSHVLLEKE 122 Query: 848 LRLEYDKIFAQEEIHWYQKSRENWIKLGDRNTKYFHAKTVIRRKRNKVHGLHLPNGIWCD 669 L+ EY+ I QEE+ W+QKSRE W+KLGD+N+ +FHA+T+IRRKRN++H L LPNG W Sbjct: 123 LQREYNHILFQEEMLWFQKSREQWVKLGDKNSSFFHAQTIIRRKRNRIHKLQLPNGTWSS 182 Query: 668 DDVTLREEQSSH*SNL 621 D L+ E ++ NL Sbjct: 183 DSSILQHEAQNYFKNL 198 >dbj|GAU12283.1| hypothetical protein TSUD_141910 [Trifolium subterraneum] Length = 1049 Score = 327 bits (837), Expect(2) = e-139 Identities = 151/226 (66%), Positives = 178/226 (78%) Frame = -2 Query: 1310 VEVSITGGKFTWNRPCSGQRNVFRKLDRALADIPWCLAFPDAFVEVLSKFHSDHNPLLLQ 1131 V+V TGG FTW+RPC+G R VFRKLDR LAD+PWC+AF +A+VEVL KFHS H PLLL+ Sbjct: 138 VDVKTTGGLFTWSRPCTGNRMVFRKLDRVLADVPWCMAFLEAYVEVLCKFHSYHKPLLLR 197 Query: 1130 CGERPQAYGPRPFRFEAVWLTHLDYHKVVQAAWNKDFSDPVNALHNVQKDSIIFNKDTFG 951 CG Q YGPRPFRFEA W+ H DY +V+ AW K D + +L VQ DSIIFNK+ FG Sbjct: 198 CGLPRQNYGPRPFRFEAAWIIHPDYSDIVKVAWGKTAGDFIGSLQQVQHDSIIFNKECFG 257 Query: 950 NIHRRKAIIERRLKGIQLALERMDVARLVYLDRELRLEYDKIFAQEEIHWYQKSRENWIK 771 NI +RKA +ERRLKGIQ ALER+D ARL+YL R+L+ YD I QEEIHWYQK+ E+WIK Sbjct: 258 NIRKRKAHLERRLKGIQNALERVDSARLIYLQRDLQQAYDLILRQEEIHWYQKAIEDWIK 317 Query: 770 LGDRNTKYFHAKTVIRRKRNKVHGLHLPNGIWCDDDVTLREEQSSH 633 LGDRNTK+FH KTVIRRKRNK+HGLHLPNG+WC DD LR E ++ Sbjct: 318 LGDRNTKFFHTKTVIRRKRNKIHGLHLPNGLWCTDDDLLRGEAHNY 363 Score = 199 bits (505), Expect(2) = e-139 Identities = 94/134 (70%), Positives = 109/134 (81%) Frame = -1 Query: 645 AKQSLIKPVTKEEVSHTLSHMHSFKAPSPDGFQTMFFKQYWHIVGDDITHLISEAFVTGT 466 A +SL +TKEEV+ L+ MH FKAP PD FQ +FFKQYWHI+GDD+ LIS F TG Sbjct: 392 ACRSLTSQITKEEVAQALNQMHPFKAPGPDRFQGIFFKQYWHIIGDDVVRLISTVFETGG 451 Query: 465 FNSSLSVTLIALIPKVDCPQNFKEFRPISLCNTIYKLITKIMVNRLRPLLDQIVGPFQSS 286 F SLS TLIALIPK+DCP NFKEFRPISLCNT+YKLITKIMVNRLRP L+QI+GP+QSS Sbjct: 452 FPPSLSETLIALIPKMDCPNNFKEFRPISLCNTVYKLITKIMVNRLRPFLNQIIGPYQSS 511 Query: 285 FLPGKGTCDDAIIL 244 FLPG+GT D+ + L Sbjct: 512 FLPGRGTTDNPVRL 525 >dbj|GAU20604.1| hypothetical protein TSUD_33400 [Trifolium subterraneum] Length = 1174 Score = 300 bits (767), Expect(2) = e-139 Identities = 141/212 (66%), Positives = 170/212 (80%) Frame = -1 Query: 636 SLIKPVTKEEVSHTLSHMHSFKAPSPDGFQTMFFKQYWHIVGDDITHLISEAFVTGTFNS 457 +L P+TK EV+ TL+ M FKAP PDGFQ +FFKQYWHIVGDDI HL+ AF TG F+ Sbjct: 344 TLTCPITKAEVTATLNSMKPFKAPGPDGFQCIFFKQYWHIVGDDIFHLVKTAFSTGNFDH 403 Query: 456 SLSVTLIALIPKVDCPQNFKEFRPISLCNTIYKLITKIMVNRLRPLLDQIVGPFQSSFLP 277 ++S TLIALIPK+D P+ FK+FRPISLCN +YKLI K++V+RLRP+LD I+GPFQSSFLP Sbjct: 404 NISNTLIALIPKIDTPKTFKDFRPISLCNIVYKLIAKVLVHRLRPILDNIIGPFQSSFLP 463 Query: 276 GKGTCDDAIILQEAIHTMRRSKRKKGDMVFKIDLEKAYDNVRWDFLEFCLHHNGFPTITT 97 G+GT D+AI+LQE IH M+RSK KKG FK+DLEKA+DNV WDFL+ CL GFP IT Sbjct: 464 GRGTSDNAIVLQEIIHFMKRSKNKKGYAAFKLDLEKAFDNVNWDFLQNCLFDFGFPEITI 523 Query: 96 KLIMHCVTSSSLSIIWNGKRLQNFNPTRGLRQ 1 +LIMHCVTSS+ SI+ NG +L F PT GLRQ Sbjct: 524 RLIMHCVTSSTYSILGNGNQLPQFKPTHGLRQ 555 Score = 225 bits (574), Expect(2) = e-139 Identities = 109/200 (54%), Positives = 140/200 (70%) Frame = -2 Query: 1223 LADIPWCLAFPDAFVEVLSKFHSDHNPLLLQCGERPQAYGPRPFRFEAVWLTHLDYHKVV 1044 L D+ AFP+AF+EVL FHSDHNPL L+ G P GPRPFRFEA W+ H +Y VV Sbjct: 117 LLDLTTTGAFPEAFIEVLCIFHSDHNPLQLRFGGLPIVRGPRPFRFEATWIDHEEYADVV 176 Query: 1043 QAAWNKDFSDPVNALHNVQKDSIIFNKDTFGNIHRRKAIIERRLKGIQLALERMDVARLV 864 AW+ + AL+NV++ SI FN++ FGNI RK IERRL+GIQ LER+D R V Sbjct: 177 DRAWHSANHNLTQALNNVREKSITFNREIFGNIFHRKKHIERRLQGIQKYLERVDSTRHV 236 Query: 863 YLDRELRLEYDKIFAQEEIHWYQKSRENWIKLGDRNTKYFHAKTVIRRKRNKVHGLHLPN 684 L++EL+ Y+ I QEE+ WYQKSRE WIK GD+N+ +FHA+T+IRRKRNK+H L LPN Sbjct: 237 ILEKELQTLYNHILFQEEMLWYQKSREQWIKFGDKNSSFFHAQTIIRRKRNKIHRLQLPN 296 Query: 683 GIWCDDDVTLREEQSSH*SN 624 G+W D TL++E ++ N Sbjct: 297 GVWTTDSATLQDEAQTYFKN 316 >gb|KYP32780.1| LINE-1 reverse transcriptase isogeny [Cajanus cajan] Length = 1123 Score = 275 bits (703), Expect(2) = e-137 Identities = 130/214 (60%), Positives = 164/214 (76%) Frame = -1 Query: 642 KQSLIKPVTKEEVSHTLSHMHSFKAPSPDGFQTMFFKQYWHIVGDDITHLISEAFVTGTF 463 K L+ PVTKEEV L+ M SFKAP PDGFQ +FFK YWH+VGDD+ +LI+EAF TG Sbjct: 300 KNLLVAPVTKEEVFKALTGMKSFKAPGPDGFQPIFFKLYWHVVGDDVWNLINEAFQTGII 359 Query: 462 NSSLSVTLIALIPKVDCPQNFKEFRPISLCNTIYKLITKIMVNRLRPLLDQIVGPFQSSF 283 ++ L+ TLI LIPKVD P ++K+FRPISLCN +YKLITK++VNRLR + I+ P QSSF Sbjct: 360 DTKLAETLIVLIPKVDAPLSYKDFRPISLCNVVYKLITKVLVNRLRVFIGNIMSPLQSSF 419 Query: 282 LPGKGTCDDAIILQEAIHTMRRSKRKKGDMVFKIDLEKAYDNVRWDFLEFCLHHNGFPTI 103 +PG+ T D+AIILQE +H M +SKRKKGD++FK+DLEKAYD + W+FL L GFP I Sbjct: 420 IPGRSTVDNAIILQEVLHFMNKSKRKKGDLIFKLDLEKAYDRIDWEFLNNVLLDFGFPDI 479 Query: 102 TTKLIMHCVTSSSLSIIWNGKRLQNFNPTRGLRQ 1 T +LIM+CV+SSSL ++WNG + P RGLRQ Sbjct: 480 TCRLIMNCVSSSSLHLLWNGVKSAAIIPRRGLRQ 513 Score = 243 bits (619), Expect(2) = e-137 Identities = 114/230 (49%), Positives = 157/230 (68%) Frame = -2 Query: 1310 VEVSITGGKFTWNRPCSGQRNVFRKLDRALADIPWCLAFPDAFVEVLSKFHSDHNPLLLQ 1131 +++ G K+TW RP G R + R+LDRAL + W + FP+A +EVL++FHSDHNP+LL+ Sbjct: 47 LDLGYFGNKYTWQRPSMGGRLISRRLDRALGNQSWRVLFPEATLEVLTRFHSDHNPILLR 106 Query: 1130 CGERPQAYGPRPFRFEAVWLTHLDYHKVVQAAWNKDFSDPVNALHNVQKDSIIFNKDTFG 951 CG + G RPFRFEA W TH + +V+ AW + + +NAL +++SI FN++ F Sbjct: 107 CGLVQRRRGVRPFRFEAAWATHEGFSDIVKLAWCGEGGNVLNALQATREESIKFNREVFC 166 Query: 950 NIHRRKAIIERRLKGIQLALERMDVARLVYLDRELRLEYDKIFAQEEIHWYQKSRENWIK 771 NI RRK +E ++KG+Q ALE +D A L+ L EL EY+ I QE+IHW+QKSRE WIK Sbjct: 167 NIFRRKKSLEAKMKGVQKALENVDSASLIRLQGELLQEYNSILLQEKIHWFQKSREQWIK 226 Query: 770 LGDRNTKYFHAKTVIRRKRNKVHGLHLPNGIWCDDDVTLREEQSSH*SNL 621 G++NT +FH +TVIRR+RN V GL LPNG WC D+ L E S + N+ Sbjct: 227 FGNKNTTFFHTQTVIRRRRNHVSGLFLPNGEWCSDNNVLEHEASLYFKNI 276 >dbj|GAU33809.1| hypothetical protein TSUD_221470, partial [Trifolium subterraneum] Length = 1164 Score = 251 bits (642), Expect(2) = e-130 Identities = 122/215 (56%), Positives = 155/215 (72%) Frame = -1 Query: 645 AKQSLIKPVTKEEVSHTLSHMHSFKAPSPDGFQTMFFKQYWHIVGDDITHLISEAFVTGT 466 A L+KPVTK+EV L M S+KAP PDGFQ +FFK +W VGDD+ + + AF TGT Sbjct: 554 ATAELVKPVTKKEVYDALMSMKSYKAPGPDGFQPIFFKLFWDTVGDDLWNFVKLAFATGT 613 Query: 465 FNSSLSVTLIALIPKVDCPQNFKEFRPISLCNTIYKLITKIMVNRLRPLLDQIVGPFQSS 286 ++ + TLI LIPK D FK+FRPISLCN YKLI+KI+V+RLRP LD IV P Q+S Sbjct: 614 YDPQVCETLIVLIPKGDNQNTFKDFRPISLCNVSYKLISKIIVSRLRPFLDGIVSPLQNS 673 Query: 285 FLPGKGTCDDAIILQEAIHTMRRSKRKKGDMVFKIDLEKAYDNVRWDFLEFCLHHNGFPT 106 F+PG+ T D+AI+LQE +H MR+SKRK GD+VFK+DL+KAYD V W+FL+ L FP Sbjct: 674 FIPGRSTKDNAIVLQEVLHQMRKSKRKNGDIVFKLDLDKAYDRVNWNFLKDTLVKFKFPP 733 Query: 105 ITTKLIMHCVTSSSLSIIWNGKRLQNFNPTRGLRQ 1 T LIM +T++S +I+WNG + F PTRGLRQ Sbjct: 734 TITSLIMFGITTASNTILWNGSKTDAFTPTRGLRQ 768 Score = 243 bits (619), Expect(2) = e-130 Identities = 116/222 (52%), Positives = 147/222 (66%) Frame = -2 Query: 1310 VEVSITGGKFTWNRPCSGQRNVFRKLDRALADIPWCLAFPDAFVEVLSKFHSDHNPLLLQ 1131 +++ G KFTW C G R V+R+LDRAL + W + + +A VE L + HSDHNPLLL+ Sbjct: 302 IDLGAFGSKFTWQGHCRGNRIVYRRLDRALCNHEWRMKYAEATVEHLVRKHSDHNPLLLR 361 Query: 1130 CGERPQAYGPRPFRFEAVWLTHLDYHKVVQAAWNKDFSDPVNALHNVQKDSIIFNKDTFG 951 C RPFRF+A W TH DY +V+ W +D + V L NV + S+IFNKD FG Sbjct: 362 CSNSMSNREGRPFRFQASWFTHKDYPPLVKETWQQDSGNIVLRLQNVAQKSVIFNKDVFG 421 Query: 950 NIHRRKAIIERRLKGIQLALERMDVARLVYLDRELRLEYDKIFAQEEIHWYQKSRENWIK 771 NI RK +E RL+GIQ ALE +D A L+ L +EL EYD I QEE WYQKSRE WIK Sbjct: 422 NIFARKKEVEGRLRGIQRALENIDSANLMRLQKELLAEYDNILFQEETLWYQKSREQWIK 481 Query: 770 LGDRNTKYFHAKTVIRRKRNKVHGLHLPNGIWCDDDVTLREE 645 LG RNT +FHA+++IRRKRNK+HG+ L NG WC D ++ E Sbjct: 482 LGSRNTSFFHAQSIIRRKRNKIHGIRLQNGDWCTDQDLMKSE 523 >gb|PNY01679.1| ribonuclease H, partial [Trifolium pratense] Length = 995 Score = 243 bits (621), Expect(2) = e-127 Identities = 118/211 (55%), Positives = 149/211 (70%) Frame = -1 Query: 633 LIKPVTKEEVSHTLSHMHSFKAPSPDGFQTMFFKQYWHIVGDDITHLISEAFVTGTFNSS 454 L KPVTK+EV L M S+KAP PDGFQ +FFK +W VGDD+ + AF G ++ Sbjct: 356 LNKPVTKKEVFDALMSMKSYKAPGPDGFQPIFFKLFWEEVGDDLWMFVKLAFXNGFYDQK 415 Query: 453 LSVTLIALIPKVDCPQNFKEFRPISLCNTIYKLITKIMVNRLRPLLDQIVGPFQSSFLPG 274 + TLI L+PK D FK+FRPISLCN YKLI+KI+V+RLRP LD IV P Q+SF+PG Sbjct: 416 ICETLIVLLPKGDSQSTFKDFRPISLCNVTYKLISKIIVSRLRPFLDSIVSPLQNSFIPG 475 Query: 273 KGTCDDAIILQEAIHTMRRSKRKKGDMVFKIDLEKAYDNVRWDFLEFCLHHNGFPTITTK 94 + T D+AI+LQE +H MR+SK+K GDMVFK+DLEKAYD V W FL+ L FP+ Sbjct: 476 RSTKDNAIVLQEILHFMRKSKKKNGDMVFKLDLEKAYDRVNWSFLKDTLEKFNFPSKIIS 535 Query: 93 LIMHCVTSSSLSIIWNGKRLQNFNPTRGLRQ 1 LIM ++SSS +I+WNG + + F P RGLRQ Sbjct: 536 LIMFGISSSSNTILWNGNKTEAFTPVRGLRQ 566 Score = 242 bits (617), Expect(2) = e-127 Identities = 116/222 (52%), Positives = 145/222 (65%) Frame = -2 Query: 1310 VEVSITGGKFTWNRPCSGQRNVFRKLDRALADIPWCLAFPDAFVEVLSKFHSDHNPLLLQ 1131 +++ G KFTW C G R V R+LDR+ + W L FP+A VE L + HSDHNP+ L+ Sbjct: 101 IDLGSFGTKFTWQGHCRGGRIVHRRLDRSFCNYDWRLKFPEATVEHLVRRHSDHNPIFLR 160 Query: 1130 CGERPQAYGPRPFRFEAVWLTHLDYHKVVQAAWNKDFSDPVNALHNVQKDSIIFNKDTFG 951 C G RPFRF+A W TH DY +V+ W +D V L NV +S IFNKD FG Sbjct: 161 CSNDTGRQGERPFRFQAAWFTHSDYPGLVKNTWARDRGSIVRCLQNVAHESAIFNKDMFG 220 Query: 950 NIHRRKAIIERRLKGIQLALERMDVARLVYLDRELRLEYDKIFAQEEIHWYQKSRENWIK 771 NI RK +E RL+GIQ ALE +D A L+ L +EL + YD I QEE WYQKSRENWIK Sbjct: 221 NIFARKKEVEARLRGIQRALEDIDSANLMRLQKELLINYDNILFQEETLWYQKSRENWIK 280 Query: 770 LGDRNTKYFHAKTVIRRKRNKVHGLHLPNGIWCDDDVTLREE 645 LG RNT +FHA+++IRRKRNK+HG+ L +G WC D +R E Sbjct: 281 LGSRNTSFFHAQSIIRRKRNKIHGIRLSSGEWCTDPDIMRTE 322 >gb|PNY14872.1| ribonuclease H, partial [Trifolium pratense] Length = 1396 Score = 245 bits (626), Expect(2) = e-125 Identities = 117/218 (53%), Positives = 152/218 (69%) Frame = -1 Query: 654 QGGAKQSLIKPVTKEEVSHTLSHMHSFKAPSPDGFQTMFFKQYWHIVGDDITHLISEAFV 475 + A L+KPV+K+EV L M S+KAP PDGFQ +FFK +W +GDD+ + AF Sbjct: 750 EDSAAAELVKPVSKKEVFDALMSMKSYKAPGPDGFQPIFFKLFWEDIGDDLWQFVKLAFE 809 Query: 474 TGTFNSSLSVTLIALIPKVDCPQNFKEFRPISLCNTIYKLITKIMVNRLRPLLDQIVGPF 295 TG ++ + TLI L+PK + FK+FRPISLCN YKLI+KI+V+RLRP LD I+ PF Sbjct: 810 TGKYDPKICETLIVLLPKGENQSTFKDFRPISLCNVTYKLISKIIVSRLRPFLDDIISPF 869 Query: 294 QSSFLPGKGTCDDAIILQEAIHTMRRSKRKKGDMVFKIDLEKAYDNVRWDFLEFCLHHNG 115 Q+SF+PG+ T D+AI+LQE +H MR+SK+K GDMVFK+DLEKAYD V W FL L Sbjct: 870 QNSFIPGRSTKDNAIVLQEVLHVMRKSKKKNGDMVFKLDLEKAYDRVNWTFLRDTLTKFN 929 Query: 114 FPTITTKLIMHCVTSSSLSIIWNGKRLQNFNPTRGLRQ 1 FP LIM +++SS SI+WNG + + F P RGLRQ Sbjct: 930 FPPKIISLIMFGISASSNSILWNGSKTEAFTPMRGLRQ 967 Score = 234 bits (596), Expect(2) = e-125 Identities = 113/222 (50%), Positives = 146/222 (65%) Frame = -2 Query: 1310 VEVSITGGKFTWNRPCSGQRNVFRKLDRALADIPWCLAFPDAFVEVLSKFHSDHNPLLLQ 1131 +++ G KFTW C G R V R+LDR + W L FP+A VE L + HSDHNP+ L+ Sbjct: 501 IDLGAFGSKFTWLGHCRGSRFVHRRLDRGFGNHAWRLKFPEATVEHLVRKHSDHNPIFLR 560 Query: 1130 CGERPQAYGPRPFRFEAVWLTHLDYHKVVQAAWNKDFSDPVNALHNVQKDSIIFNKDTFG 951 C + RPFRF+A W TH Y +V+ AW +D S+ V +L NV +S IFNK+ FG Sbjct: 561 CSNDMGSREGRPFRFQAAWFTHNAYPLLVKNAWARDRSNIVQSLQNVANESTIFNKEVFG 620 Query: 950 NIHRRKAIIERRLKGIQLALERMDVARLVYLDRELRLEYDKIFAQEEIHWYQKSRENWIK 771 NI RK +E RLKGIQ ALE +D A L+ L +EL Y+ I QEE W+QKSRENWI+ Sbjct: 621 NIFARKKEVEARLKGIQRALEDIDSANLMRLQKELLASYEDILFQEETLWFQKSRENWIR 680 Query: 770 LGDRNTKYFHAKTVIRRKRNKVHGLHLPNGIWCDDDVTLREE 645 LG RNT +FHA+++IRRKRNK+HG+ L +G WC D +R E Sbjct: 681 LGSRNTAFFHAQSIIRRKRNKIHGIRLSSGDWCTDPEVMRSE 722 >gb|PNY00178.1| retrotransposon-related protein, partial [Trifolium pratense] Length = 951 Score = 353 bits (907), Expect(2) = e-125 Identities = 164/230 (71%), Positives = 186/230 (80%) Frame = -2 Query: 1310 VEVSITGGKFTWNRPCSGQRNVFRKLDRALADIPWCLAFPDAFVEVLSKFHSDHNPLLLQ 1131 VEV+ TGG FTWNRPC+G V+RKLDRALAD+PW +AFPDA+VEVL KFHSDHNPLLL+ Sbjct: 613 VEVTSTGGNFTWNRPCAGNHMVYRKLDRALADVPWRMAFPDAYVEVLCKFHSDHNPLLLR 672 Query: 1130 CGERPQAYGPRPFRFEAVWLTHLDYHKVVQAAWNKDFSDPVNALHNVQKDSIIFNKDTFG 951 CG Q YGPRPFRFEA W TH +Y +VQ AW K SD V L +VQ+DSI+FNKD FG Sbjct: 673 CGLPLQDYGPRPFRFEAAWTTHPNYSNIVQKAWGKSTSDIVTCLRHVQEDSILFNKDIFG 732 Query: 950 NIHRRKAIIERRLKGIQLALERMDVARLVYLDRELRLEYDKIFAQEEIHWYQKSRENWIK 771 NI +RK IERRLKGIQ ALER+D ARL+YL REL+ +YD I QEEIHWYQK+RE+WIK Sbjct: 733 NIRKRKEQIERRLKGIQRALERVDSARLIYLQRELQHDYDVILGQEEIHWYQKAREDWIK 792 Query: 770 LGDRNTKYFHAKTVIRRKRNKVHGLHLPNGIWCDDDVTLREEQSSH*SNL 621 LGDRNTKYFH +T+IRRKRNK+HGLHLP GIWC DD TLREE H NL Sbjct: 793 LGDRNTKYFHTRTIIRRKRNKIHGLHLPGGIWCTDDTTLREEAHKHFKNL 842 Score = 124 bits (312), Expect(2) = e-125 Identities = 59/85 (69%), Positives = 68/85 (80%) Frame = -1 Query: 645 AKQSLIKPVTKEEVSHTLSHMHSFKAPSPDGFQTMFFKQYWHIVGDDITHLISEAFVTGT 466 A QSL + VT+EEV+ L+ MH FKAP PDGFQ +FFKQYWHIVGDD+ LI+ AF TG Sbjct: 867 ACQSLTQQVTREEVTQALNQMHPFKAPGPDGFQGIFFKQYWHIVGDDVVRLIATAFETGR 926 Query: 465 FNSSLSVTLIALIPKVDCPQNFKEF 391 F +LS TLIALIPKVDCP+NFKEF Sbjct: 927 FPPTLSETLIALIPKVDCPKNFKEF 951