BLASTX nr result

ID: Astragalus24_contig00012009 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00012009
         (865 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ERN05168.1| hypothetical protein AMTR_s00053p00213400 [Ambore...    59   5e-06
ref|XP_006843493.2| calcium-transporting ATPase 4, plasma membra...    59   5e-06

>gb|ERN05168.1| hypothetical protein AMTR_s00053p00213400 [Amborella trichopoda]
          Length = 1037

 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 40/90 (44%), Positives = 57/90 (63%), Gaps = 5/90 (5%)
 Frame = +2

Query: 2   LNMTIGVFAVIDGLQLVIMTLSHAIPMKNLMHEKDLVHNLVTYETLGPATIIESDLIVTL 181
           +++TI V AV +GL L + TLS A  MK LM++K LV +L   ET+G AT I +D   TL
Sbjct: 402 ISVTIIVVAVPEGLPLAV-TLSLAFAMKKLMNDKALVRHLAACETMGSATCICTDKTGTL 460

Query: 182 TTNYMA----YDCD-INYFELGEQLTEILS 256
           TTN+M     + CD +  F++GE+  E+ S
Sbjct: 461 TTNHMVLTKLWICDQVKDFKVGERGEELKS 490


>ref|XP_006843493.2| calcium-transporting ATPase 4, plasma membrane-type [Amborella
           trichopoda]
          Length = 1038

 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 40/90 (44%), Positives = 57/90 (63%), Gaps = 5/90 (5%)
 Frame = +2

Query: 2   LNMTIGVFAVIDGLQLVIMTLSHAIPMKNLMHEKDLVHNLVTYETLGPATIIESDLIVTL 181
           +++TI V AV +GL L + TLS A  MK LM++K LV +L   ET+G AT I +D   TL
Sbjct: 403 ISVTIIVVAVPEGLPLAV-TLSLAFAMKKLMNDKALVRHLAACETMGSATCICTDKTGTL 461

Query: 182 TTNYMA----YDCD-INYFELGEQLTEILS 256
           TTN+M     + CD +  F++GE+  E+ S
Sbjct: 462 TTNHMVLTKLWICDQVKDFKVGERGEELKS 491


Top