BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00005984
         (781 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposo...   330   e-100
gb|PNX88215.1| hypothetical protein L195_g044317, partial [Trifo...   305   2e-98
gb|KYP36975.1| Retrovirus-related Pol polyprotein from transposo...   299   4e-98
gb|PNY12955.1| retrovirus-related Pol polyprotein from transposo...   302   1e-96
gb|KYP40245.1| Retrovirus-related Pol polyprotein from transposo...   293   2e-96
gb|PNX78102.1| retrovirus-related Pol polyprotein from transposo...   301   3e-96
gb|KYP68417.1| Retrovirus-related Pol polyprotein from transposo...   295   1e-95
gb|PNX76161.1| retrovirus-related Pol polyprotein from transposo...   296   4e-95
ref|XP_014622404.1| PREDICTED: uncharacterized mitochondrial pro...   294   1e-94
gb|PNX84939.1| retrovirus-related Pol polyprotein from transposo...   296   1e-94
gb|PNX77250.1| retrovirus-related Pol polyprotein from transposo...   296   1e-94
gb|PNX77046.1| retrovirus-related Pol polyprotein from transposo...   296   2e-94
gb|KYP67571.1| Retrovirus-related Pol polyprotein from transposo...   293   1e-93
gb|KYP67562.1| Retrovirus-related Pol polyprotein from transposo...   293   1e-93
gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposo...   294   2e-93
gb|KYP48058.1| Retrovirus-related Pol polyprotein from transposo...   293   3e-93
gb|KYP46114.1| Retrovirus-related Pol polyprotein from transposo...   293   3e-93
dbj|GAU28846.1| hypothetical protein TSUD_21830 [Trifolium subte...   309   6e-93
gb|PNX95703.1| retrovirus-related Pol polyprotein from transposo...   303   6e-93
gb|PNX93770.1| histone deacetylase [Trifolium pratense]               307   2e-92

>gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1429

 Score =  330 bits (845), Expect = e-100
 Identities = 161/259 (62%), Positives = 202/259 (77%)
 Frame = +3

Query: 3    AFLNGFI*EEVYVEQPPGFESYEKPDLVFKLKKAIYGLKQAPRAWYDRLTKTLLGFGFVN 182
            AFLNG + E+VY++QP GF   E   LV KL KAIYGLKQAPRAWY+ LT TL+ FGF  
Sbjct: 1028 AFLNGQLHEDVYMQQPQGFIQGEST-LVCKLHKAIYGLKQAPRAWYESLTNTLISFGFQQ 1086

Query: 183  SKCDPSLLVYCTKVCCXXXXXXXXXXXXTGSSTTAVQSLIDKLTTVFALKKFESLDYFLG 362
            SKCDPSLL++    CC            TGSS TA+  +++KL   F+LK+  +L+YFLG
Sbjct: 1087 SKCDPSLLIFNKHGCCLLILIYVDDIIITGSSNTAINLIVNKLNATFSLKQLGTLEYFLG 1146

Query: 363  IEVKAVKNGSLILNQSKYIRELLERAGMETAKGISTPLPAKLKLSRFGSNYFEDPSLYRS 542
            IE K   +G+L L+Q+KYIR++L RAGME  KGISTPLPA LKLS+ G++ F++P+LYRS
Sbjct: 1147 IECKLTPSGALHLSQAKYIRDILHRAGMEDCKGISTPLPANLKLSKTGADPFDNPTLYRS 1206

Query: 543  IVGALQYATITRPEIGYAVNKACQFLSQPLDTHWTAVKRILRYLKGTLDYGLVLKPASTS 722
            IVGALQYATITRPE+GY+V+K CQF +QPL +HW+AVKRILRYLKG++D+GL L PA+TS
Sbjct: 1207 IVGALQYATITRPELGYSVSKVCQFFAQPLVSHWSAVKRILRYLKGSIDHGLTLLPATTS 1266

Query: 723  APLSLQAYCDADWASDVDD 779
            APLS+ A+CDADWASD+DD
Sbjct: 1267 APLSINAFCDADWASDIDD 1285


>gb|PNX88215.1| hypothetical protein L195_g044317, partial [Trifolium pratense]
          Length = 476

 Score =  305 bits (781), Expect = 2e-98
 Identities = 152/259 (58%), Positives = 192/259 (74%)
 Frame = +3

Query: 3   AFLNGFI*EEVYVEQPPGFESYEKPDLVFKLKKAIYGLKQAPRAWYDRLTKTLLGFGFVN 182
           AFLNG + EEVY+ QP GFE  +K  LV KL K++YGLKQAPRAWYD+LT+TLL  GFV 
Sbjct: 76  AFLNGILQEEVYMTQPTGFEVSDK-SLVCKLHKSLYGLKQAPRAWYDKLTQTLLQMGFVK 134

Query: 183 SKCDPSLLVYCTKVCCXXXXXXXXXXXXTGSSTTAVQSLIDKLTTVFALKKFESLDYFLG 362
           SKCDPSLLV+  +  C            TGS+   ++ LIDKL   FALK+   +DYFLG
Sbjct: 135 SKCDPSLLVHHQQGACTYVLIYVDDILITGSAPHLIKDLIDKLNVKFALKQLGEVDYFLG 194

Query: 363 IEVKAVKNGSLILNQSKYIRELLERAGMETAKGISTPLPAKLKLSRFGSNYFEDPSLYRS 542
           I+V    +GSL+L+QSKYI +LL +  ME  K I +P+    +LS+FG++  +DPSLYRS
Sbjct: 195 IQVHHKPSGSLLLHQSKYINDLLNKTKMENCKPIGSPMVNSCRLSKFGTDSMQDPSLYRS 254

Query: 543 IVGALQYATITRPEIGYAVNKACQFLSQPLDTHWTAVKRILRYLKGTLDYGLVLKPASTS 722
            VGALQYATITRP+I Y+VNK CQF++ PL++HW AVKRILRYLKGT+ YGL+L+P+S+S
Sbjct: 255 TVGALQYATITRPDIAYSVNKVCQFMAHPLESHWKAVKRILRYLKGTVHYGLLLQPSSSS 314

Query: 723 APLSLQAYCDADWASDVDD 779
            P SL+AY DADWA+D DD
Sbjct: 315 PPFSLRAYSDADWATDQDD 333


>gb|KYP36975.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 334

 Score =  299 bits (766), Expect = 4e-98
 Identities = 153/259 (59%), Positives = 188/259 (72%)
 Frame = +3

Query: 3   AFLNGFI*EEVYVEQPPGFESYEKPDLVFKLKKAIYGLKQAPRAWYDRLTKTLLGFGFVN 182
           AFLNG + EEVY+ QPPGFES  K  LV KL KAIYGLKQAPRAW+D+L  TL    F  
Sbjct: 6   AFLNGNLEEEVYMSQPPGFESSNK-SLVCKLNKAIYGLKQAPRAWFDKLKATLFHINFQI 64

Query: 183 SKCDPSLLVYCTKVCCXXXXXXXXXXXXTGSSTTAVQSLIDKLTTVFALKKFESLDYFLG 362
           SKCDPSL VY                  TG++TT +++++ +L + F+LK    LDYFLG
Sbjct: 65  SKCDPSLFVYSHANNVIYILVYVDDIIITGNNTTFLRNIVSQLNSAFSLKDLGRLDYFLG 124

Query: 363 IEVKAVKNGSLILNQSKYIRELLERAGMETAKGISTPLPAKLKLSRFGSNYFEDPSLYRS 542
           IEVK+  +GSL L QSKYIR+LL R  ME +  I++P+ +  KLS+ GS+ F D SLYRS
Sbjct: 125 IEVKSNSDGSLTLTQSKYIRDLLNRTNMENSNSITSPMVSGCKLSKSGSDKFLDVSLYRS 184

Query: 543 IVGALQYATITRPEIGYAVNKACQFLSQPLDTHWTAVKRILRYLKGTLDYGLVLKPASTS 722
           +VGALQYATITRPEI ++VNK CQF+S PL+ HW+AVKRILRYLKGT+  GL L+PA T+
Sbjct: 185 VVGALQYATITRPEISFSVNKVCQFMSNPLEHHWSAVKRILRYLKGTMSLGLHLQPAPTN 244

Query: 723 APLSLQAYCDADWASDVDD 779
           +PLS+ AYCDADWASD DD
Sbjct: 245 SPLSIHAYCDADWASDPDD 263


>gb|PNY12955.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 535

 Score =  302 bits (773), Expect = 1e-96
 Identities = 149/259 (57%), Positives = 191/259 (73%)
 Frame = +3

Query: 3   AFLNGFI*EEVYVEQPPGFESYEKPDLVFKLKKAIYGLKQAPRAWYDRLTKTLLGFGFVN 182
           AFLNG++ EEVY++QP GFES +K  LV KL K++YGLKQAPRAWY+RLT+ LL  GFV 
Sbjct: 133 AFLNGWLQEEVYMKQPAGFESSDK-SLVCKLHKSLYGLKQAPRAWYERLTQALLQMGFVT 191

Query: 183 SKCDPSLLVYCTKVCCXXXXXXXXXXXXTGSSTTAVQSLIDKLTTVFALKKFESLDYFLG 362
           SKCDPSLL++  +  C            TGS+   ++ LI KL + FALK+   +DYFLG
Sbjct: 192 SKCDPSLLIHYQQGACTYVLIYVDDILITGSAPHLIKDLIHKLNSQFALKQLGEVDYFLG 251

Query: 363 IEVKAVKNGSLILNQSKYIRELLERAGMETAKGISTPLPAKLKLSRFGSNYFEDPSLYRS 542
           IEV  + +G L+LNQSKYIR+LL R  ME  K I +P+ +  +LS+FG++   DPSLYRS
Sbjct: 252 IEVHHMPSGGLLLNQSKYIRDLLCRTNMENCKPIGSPMVSSCRLSKFGTDAMSDPSLYRS 311

Query: 543 IVGALQYATITRPEIGYAVNKACQFLSQPLDTHWTAVKRILRYLKGTLDYGLVLKPASTS 722
            VGALQYAT+TRP+I ++VNK CQF++ PL+THW AVKRILRYLKGT  +GL+L P+ + 
Sbjct: 312 TVGALQYATLTRPDIAFSVNKVCQFMAHPLETHWKAVKRILRYLKGTTTHGLLLNPSPSG 371

Query: 723 APLSLQAYCDADWASDVDD 779
            P SL+AY DADWA+D DD
Sbjct: 372 PPFSLRAYSDADWATDQDD 390


>gb|KYP40245.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 285

 Score =  293 bits (750), Expect = 2e-96
 Identities = 144/259 (55%), Positives = 188/259 (72%)
 Frame = +3

Query: 3   AFLNGFI*EEVYVEQPPGFESYEKPDLVFKLKKAIYGLKQAPRAWYDRLTKTLLGFGFVN 182
           AFLNG + E +Y+ QPPGFE+ +K  LV KL KA+YGLKQAPR W+D+L  TL  FGF  
Sbjct: 6   AFLNGNLEETIYMVQPPGFEAEDKT-LVCKLNKALYGLKQAPRQWFDKLKLTLTQFGFQA 64

Query: 183 SKCDPSLLVYCTKVCCXXXXXXXXXXXXTGSSTTAVQSLIDKLTTVFALKKFESLDYFLG 362
           SKCDPSL  Y  +               TG+S++ +  + ++L ++F+LK+  SLDYFLG
Sbjct: 65  SKCDPSLFWYKHQTHTIFILVYVDDIIITGNSSSLIHQITNQLDSIFSLKQLGSLDYFLG 124

Query: 363 IEVKAVKNGSLILNQSKYIRELLERAGMETAKGISTPLPAKLKLSRFGSNYFEDPSLYRS 542
           IEVK + + SL+L QSKYIR+LL +  M  A G  +P+ +  KLSR G+++F DP+L+RS
Sbjct: 125 IEVKYLPDKSLVLTQSKYIRDLLYKTNMAEAHGAPSPMFSNCKLSRSGNDFFHDPTLFRS 184

Query: 543 IVGALQYATITRPEIGYAVNKACQFLSQPLDTHWTAVKRILRYLKGTLDYGLVLKPASTS 722
           IVGALQYAT+TRPEI + VNK CQF++ PLD+HW AVKRIL+YLKGTL YGL ++PA   
Sbjct: 185 IVGALQYATLTRPEISFTVNKVCQFMANPLDSHWVAVKRILKYLKGTLSYGLHMQPADVD 244

Query: 723 APLSLQAYCDADWASDVDD 779
            P+SL A+CDADWASD+DD
Sbjct: 245 DPISLTAFCDADWASDIDD 263


>gb|PNX78102.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 535

 Score =  301 bits (771), Expect = 3e-96
 Identities = 149/259 (57%), Positives = 192/259 (74%)
 Frame = +3

Query: 3   AFLNGFI*EEVYVEQPPGFESYEKPDLVFKLKKAIYGLKQAPRAWYDRLTKTLLGFGFVN 182
           AFLNG + EEVY+ QPPGFES +K +LV KL KA+YGLKQAPRAWYDRLT+TLL  GF  
Sbjct: 133 AFLNGILQEEVYMTQPPGFESSDK-NLVCKLHKALYGLKQAPRAWYDRLTQTLLQMGFTK 191

Query: 183 SKCDPSLLVYCTKVCCXXXXXXXXXXXXTGSSTTAVQSLIDKLTTVFALKKFESLDYFLG 362
           S+CDPSLLV+     C            TGS+   ++ LI KL   FALK+   +DYFLG
Sbjct: 192 SRCDPSLLVHHQNGACTYVLVYVDDILITGSAPHLIKDLIHKLNIKFALKQLGEVDYFLG 251

Query: 363 IEVKAVKNGSLILNQSKYIRELLERAGMETAKGISTPLPAKLKLSRFGSNYFEDPSLYRS 542
           +EV    +GS++L+QSKYI++LL +  ME  K I +P+ +  KLS+FG++  EDPSLYRS
Sbjct: 252 LEVHHSTSGSILLHQSKYIKDLLCKTKMENCKPIGSPMVSSCKLSKFGTDTMEDPSLYRS 311

Query: 543 IVGALQYATITRPEIGYAVNKACQFLSQPLDTHWTAVKRILRYLKGTLDYGLVLKPASTS 722
            VGALQYAT+TRP+I ++VNK CQF++ PL++HW AVKRILRYLKGT ++GL+L P+ +S
Sbjct: 312 TVGALQYATLTRPDIAFSVNKVCQFMAHPLESHWKAVKRILRYLKGTENHGLLLHPSKSS 371

Query: 723 APLSLQAYCDADWASDVDD 779
            P S++AY DADWA+D DD
Sbjct: 372 PPFSIRAYSDADWANDQDD 390


>gb|KYP68417.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 394

 Score =  295 bits (755), Expect = 1e-95
 Identities = 153/259 (59%), Positives = 188/259 (72%)
 Frame = +3

Query: 3   AFLNGFI*EEVYVEQPPGFESYEKPDLVFKLKKAIYGLKQAPRAWYDRLTKTLLGFGFVN 182
           AFLNG + EEVY+ QPPGFE+ +K +LV KL KAIYGLKQAPRAW+D+L  TLL   F  
Sbjct: 6   AFLNGTLEEEVYMTQPPGFEASDK-NLVCKLHKAIYGLKQAPRAWFDKLKSTLLQLNFYA 64

Query: 183 SKCDPSLLVYCTKVCCXXXXXXXXXXXXTGSSTTAVQSLIDKLTTVFALKKFESLDYFLG 362
           SKCDPSL VY                  TG+++T + +L+ +L ++F+LK    LD+FLG
Sbjct: 65  SKCDPSLFVYSHANNVIYILVYVDDIIITGNNSTILHTLVSQLHSIFSLKDLGDLDFFLG 124

Query: 363 IEVKAVKNGSLILNQSKYIRELLERAGMETAKGISTPLPAKLKLSRFGSNYFEDPSLYRS 542
           IEVK+  +GSLIL QSKYIR+LL R  ME +K IS+P+ +  KLS+ GS  F D SLYRS
Sbjct: 125 IEVKSQPDGSLILTQSKYIRDLLNRTDMEGSKPISSPMVSGSKLSKAGSEDFLDASLYRS 184

Query: 543 IVGALQYATITRPEIGYAVNKACQFLSQPLDTHWTAVKRILRYLKGTLDYGLVLKPASTS 722
           +VGALQYATI RPEI ++VNK CQF+S PL  HW AVKRILRYLKGT  +GL L+PAS+ 
Sbjct: 185 VVGALQYATIIRPEISFSVNKVCQFMSHPLTHHWAAVKRILRYLKGTTSWGLRLQPASSP 244

Query: 723 APLSLQAYCDADWASDVDD 779
           + LS+ AYCDADWASD DD
Sbjct: 245 SSLSIHAYCDADWASDPDD 263


>gb|PNX76161.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 459

 Score =  296 bits (757), Expect = 4e-95
 Identities = 148/259 (57%), Positives = 188/259 (72%)
 Frame = +3

Query: 3   AFLNGFI*EEVYVEQPPGFESYEKPDLVFKLKKAIYGLKQAPRAWYDRLTKTLLGFGFVN 182
           AFLNG + EEVY+ QP GFES +K  LV KL K++YGLKQAPRAWY+RLT+TLL  GF+ 
Sbjct: 121 AFLNGILHEEVYMTQPTGFESSDK-SLVCKLHKSLYGLKQAPRAWYERLTQTLLQMGFIA 179

Query: 183 SKCDPSLLVYCTKVCCXXXXXXXXXXXXTGSSTTAVQSLIDKLTTVFALKKFESLDYFLG 362
           SKCDPSL+V   +  C            TGS+   +Q +I KL    ALK+   +DYFLG
Sbjct: 180 SKCDPSLMVLHQQGACTYVLIYVDDILITGSAPHLIQDVIQKLNFKLALKQLGEVDYFLG 239

Query: 363 IEVKAVKNGSLILNQSKYIRELLERAGMETAKGISTPLPAKLKLSRFGSNYFEDPSLYRS 542
           IEV    +G LILNQSKYIR+LL +  M+  K I +P+    +LSRFG++   DPSLYRS
Sbjct: 240 IEVHKTASGGLILNQSKYIRDLLCKTTMDNCKPIGSPMVNSCRLSRFGTDAMSDPSLYRS 299

Query: 543 IVGALQYATITRPEIGYAVNKACQFLSQPLDTHWTAVKRILRYLKGTLDYGLVLKPASTS 722
            VGALQYAT+TRP+I ++VNK CQF++ PL++HW AVKRILRYLKGT+++GL+L P+ +S
Sbjct: 300 TVGALQYATLTRPDISFSVNKVCQFIAHPLESHWKAVKRILRYLKGTVNHGLLLHPSPSS 359

Query: 723 APLSLQAYCDADWASDVDD 779
            P SL+AY DADWA+D DD
Sbjct: 360 PPFSLRAYSDADWATDQDD 378


>ref|XP_014622404.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Glycine max]
          Length = 443

 Score =  294 bits (753), Expect = 1e-94
 Identities = 145/259 (55%), Positives = 189/259 (72%)
 Frame = +3

Query: 3   AFLNGFI*EEVYVEQPPGFESYEKPDLVFKLKKAIYGLKQAPRAWYDRLTKTLLGFGFVN 182
           AFLN F+ E V+++QPPGFE  ++  LV K  KAIYG KQAPR W+DRL  TLL  GFV+
Sbjct: 40  AFLNRFLEETVFMKQPPGFEVIDR-SLVCKFNKAIYGSKQAPRQWFDRLKFTLLQLGFVS 98

Query: 183 SKCDPSLLVYCTKVCCXXXXXXXXXXXXTGSSTTAVQSLIDKLTTVFALKKFESLDYFLG 362
           SK D SL +Y  ++              TGSST+ +Q L DKL T F+LK+   LD+FLG
Sbjct: 99  SKSDSSLFIYRHQLHTVYLLVYVDDIILTGSSTSLIQQLTDKLNTAFSLKQLGHLDFFLG 158

Query: 363 IEVKAVKNGSLILNQSKYIRELLERAGMETAKGISTPLPAKLKLSRFGSNYFEDPSLYRS 542
           +E+K + N S+++ QSKYIR+LL +  M  A  IS+P+ +  KLSR G++ F DP+LYRS
Sbjct: 159 LEIKYLFNKSILMTQSKYIRDLLHKTNMAEAHSISSPMVSNCKLSRHGADAFHDPTLYRS 218

Query: 543 IVGALQYATITRPEIGYAVNKACQFLSQPLDTHWTAVKRILRYLKGTLDYGLVLKPASTS 722
           +VGALQYAT+TRPEI + VNK CQF+  PLD+HWT VKRILRYLKGTL +GL+L+P S +
Sbjct: 219 VVGALQYATLTRPEISFVVNKVCQFMVAPLDSHWTVVKRILRYLKGTLSHGLLLQPTSIA 278

Query: 723 APLSLQAYCDADWASDVDD 779
            PL+++A+C+ADWASDVDD
Sbjct: 279 KPLNIRAFCNADWASDVDD 297


>gb|PNX84939.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 499

 Score =  296 bits (757), Expect = 1e-94
 Identities = 148/259 (57%), Positives = 188/259 (72%)
 Frame = +3

Query: 3   AFLNGFI*EEVYVEQPPGFESYEKPDLVFKLKKAIYGLKQAPRAWYDRLTKTLLGFGFVN 182
           AFLNG + EEVY+ QP GFES +K  LV KL K++YGLKQAPRAWY+RLT+TLL  GF+ 
Sbjct: 190 AFLNGILHEEVYMTQPTGFESSDK-SLVCKLHKSLYGLKQAPRAWYERLTQTLLQMGFIA 248

Query: 183 SKCDPSLLVYCTKVCCXXXXXXXXXXXXTGSSTTAVQSLIDKLTTVFALKKFESLDYFLG 362
           SKCDPSL+V   +  C            TGS+   +Q +I KL    ALK+   +DYFLG
Sbjct: 249 SKCDPSLMVLHQQGACTYVLIYVDDILITGSAPHLIQDVIQKLNFKLALKQLGEVDYFLG 308

Query: 363 IEVKAVKNGSLILNQSKYIRELLERAGMETAKGISTPLPAKLKLSRFGSNYFEDPSLYRS 542
           IEV    +G LILNQSKYIR+LL +  M+  K I +P+    +LSRFG++   DPSLYRS
Sbjct: 309 IEVHKTASGGLILNQSKYIRDLLCKTTMDNCKPIGSPMVNSCRLSRFGTDAMSDPSLYRS 368

Query: 543 IVGALQYATITRPEIGYAVNKACQFLSQPLDTHWTAVKRILRYLKGTLDYGLVLKPASTS 722
            VGALQYAT+TRP+I ++VNK CQF++ PL++HW AVKRILRYLKGT+++GL+L P+ +S
Sbjct: 369 TVGALQYATLTRPDISFSVNKVCQFIAHPLESHWKAVKRILRYLKGTVNHGLLLHPSPSS 428

Query: 723 APLSLQAYCDADWASDVDD 779
            P SL+AY DADWA+D DD
Sbjct: 429 PPFSLRAYSDADWATDQDD 447


>gb|PNX77250.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 499

 Score =  296 bits (757), Expect = 1e-94
 Identities = 148/259 (57%), Positives = 188/259 (72%)
 Frame = +3

Query: 3   AFLNGFI*EEVYVEQPPGFESYEKPDLVFKLKKAIYGLKQAPRAWYDRLTKTLLGFGFVN 182
           AFLNG + EEVY+ QP GFES +K  LV KL K++YGLKQAPRAWY+RLT+TLL  GF+ 
Sbjct: 97  AFLNGILHEEVYMTQPTGFESSDK-SLVCKLHKSLYGLKQAPRAWYERLTQTLLQMGFIA 155

Query: 183 SKCDPSLLVYCTKVCCXXXXXXXXXXXXTGSSTTAVQSLIDKLTTVFALKKFESLDYFLG 362
           SKCDPSL+V   +  C            TGS+   +Q +I KL    ALK+   +DYFLG
Sbjct: 156 SKCDPSLMVLHQQGACTYVLIYVDDILITGSAPHLIQDVIQKLNFKLALKQLGEVDYFLG 215

Query: 363 IEVKAVKNGSLILNQSKYIRELLERAGMETAKGISTPLPAKLKLSRFGSNYFEDPSLYRS 542
           IEV    +G LILNQSKYIR+LL +  M+  K I +P+    +LSRFG++   DPSLYRS
Sbjct: 216 IEVHKTASGGLILNQSKYIRDLLCKTTMDNCKPIGSPMVNSCRLSRFGTDAMSDPSLYRS 275

Query: 543 IVGALQYATITRPEIGYAVNKACQFLSQPLDTHWTAVKRILRYLKGTLDYGLVLKPASTS 722
            VGALQYAT+TRP+I ++VNK CQF++ PL++HW AVKRILRYLKGT+++GL+L P+ +S
Sbjct: 276 TVGALQYATLTRPDISFSVNKVCQFIAHPLESHWKAVKRILRYLKGTVNHGLLLHPSPSS 335

Query: 723 APLSLQAYCDADWASDVDD 779
            P SL+AY DADWA+D DD
Sbjct: 336 PPFSLRAYSDADWATDQDD 354


>gb|PNX77046.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 515

 Score =  296 bits (757), Expect = 2e-94
 Identities = 148/259 (57%), Positives = 188/259 (72%)
 Frame = +3

Query: 3   AFLNGFI*EEVYVEQPPGFESYEKPDLVFKLKKAIYGLKQAPRAWYDRLTKTLLGFGFVN 182
           AFLNG + EEVY+ QP GFES +K  LV KL K++YGLKQAPRAWY+RLT+TLL  GF+ 
Sbjct: 206 AFLNGILHEEVYMTQPTGFESSDK-SLVCKLHKSLYGLKQAPRAWYERLTQTLLQMGFIA 264

Query: 183 SKCDPSLLVYCTKVCCXXXXXXXXXXXXTGSSTTAVQSLIDKLTTVFALKKFESLDYFLG 362
           SKCDPSL+V   +  C            TGS+   +Q +I KL    ALK+   +DYFLG
Sbjct: 265 SKCDPSLMVLHQQGACTYVLIYVDDILITGSAPHLIQDVIQKLNFKLALKQLGEVDYFLG 324

Query: 363 IEVKAVKNGSLILNQSKYIRELLERAGMETAKGISTPLPAKLKLSRFGSNYFEDPSLYRS 542
           IEV    +G LILNQSKYIR+LL +  M+  K I +P+    +LSRFG++   DPSLYRS
Sbjct: 325 IEVHKTASGGLILNQSKYIRDLLCKTTMDNCKPIGSPMVNSCRLSRFGTDAMSDPSLYRS 384

Query: 543 IVGALQYATITRPEIGYAVNKACQFLSQPLDTHWTAVKRILRYLKGTLDYGLVLKPASTS 722
            VGALQYAT+TRP+I ++VNK CQF++ PL++HW AVKRILRYLKGT+++GL+L P+ +S
Sbjct: 385 TVGALQYATLTRPDISFSVNKVCQFIAHPLESHWKAVKRILRYLKGTVNHGLLLHPSPSS 444

Query: 723 APLSLQAYCDADWASDVDD 779
            P SL+AY DADWA+D DD
Sbjct: 445 PPFSLRAYSDADWATDQDD 463


>gb|KYP67571.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 482

 Score =  293 bits (749), Expect = 1e-93
 Identities = 151/259 (58%), Positives = 185/259 (71%)
 Frame = +3

Query: 3   AFLNGFI*EEVYVEQPPGFESYEKPDLVFKLKKAIYGLKQAPRAWYDRLTKTLLGFGFVN 182
           AFLNG + EEVY+ QP GFES +K  LV +L KAIYGLKQAPRAW+++L  TLL F F  
Sbjct: 137 AFLNGTLAEEVYMTQPTGFESSDKT-LVCRLHKAIYGLKQAPRAWFEKLKSTLLQFHFQA 195

Query: 183 SKCDPSLLVYCTKVCCXXXXXXXXXXXXTGSSTTAVQSLIDKLTTVFALKKFESLDYFLG 362
           SKCDPSL VY                  TG+++  +QSL+ +L + F+LK    LDYFLG
Sbjct: 196 SKCDPSLFVYSVDNNIIYVLVYVDDIIITGNNSIVLQSLVSRLHSAFSLKDLRDLDYFLG 255

Query: 363 IEVKAVKNGSLILNQSKYIRELLERAGMETAKGISTPLPAKLKLSRFGSNYFEDPSLYRS 542
           IEVK   +GSLIL QSKYIR LL R  ME +K IS+P+ +  KLS+  S  F D SLYRS
Sbjct: 256 IEVKNQSDGSLILTQSKYIRNLLNRTDMEASKPISSPMVSGCKLSKIRSEKFPDASLYRS 315

Query: 543 IVGALQYATITRPEIGYAVNKACQFLSQPLDTHWTAVKRILRYLKGTLDYGLVLKPASTS 722
           +VGALQYATI RPEI ++VNK CQF+SQPL+ HW  VKRILRYLKG + +GL L+P+ ++
Sbjct: 316 VVGALQYATIIRPEISFSVNKVCQFMSQPLEQHWIVVKRILRYLKGIISWGLRLQPSPST 375

Query: 723 APLSLQAYCDADWASDVDD 779
           + LS+QAYCDADWASD DD
Sbjct: 376 SSLSIQAYCDADWASDPDD 394


>gb|KYP67562.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 482

 Score =  293 bits (749), Expect = 1e-93
 Identities = 151/259 (58%), Positives = 185/259 (71%)
 Frame = +3

Query: 3   AFLNGFI*EEVYVEQPPGFESYEKPDLVFKLKKAIYGLKQAPRAWYDRLTKTLLGFGFVN 182
           AFLNG + EEVY+ QP GFES +K  LV +L KAIYGLKQAPRAW+++L  TLL F F  
Sbjct: 137 AFLNGTLAEEVYMTQPTGFESSDKT-LVCRLHKAIYGLKQAPRAWFEKLKSTLLQFHFQA 195

Query: 183 SKCDPSLLVYCTKVCCXXXXXXXXXXXXTGSSTTAVQSLIDKLTTVFALKKFESLDYFLG 362
           SKCDPSL VY                  TG+++  +QSL+ +L + F+LK    LDYFLG
Sbjct: 196 SKCDPSLFVYSVDNNIIYVLVYVDDIIITGNNSIVLQSLVSRLHSAFSLKDLRDLDYFLG 255

Query: 363 IEVKAVKNGSLILNQSKYIRELLERAGMETAKGISTPLPAKLKLSRFGSNYFEDPSLYRS 542
           IEVK   +GSLIL QSKYIR LL R  ME +K IS+P+ +  KLS+  S  F D SLYRS
Sbjct: 256 IEVKNQSDGSLILTQSKYIRNLLNRTDMEASKPISSPMVSGCKLSKIRSEKFPDASLYRS 315

Query: 543 IVGALQYATITRPEIGYAVNKACQFLSQPLDTHWTAVKRILRYLKGTLDYGLVLKPASTS 722
           +VGALQYATI RPEI ++VNK CQF+SQPL+ HW  VKRILRYLKG + +GL L+P+ ++
Sbjct: 316 VVGALQYATIIRPEISFSVNKVCQFMSQPLEQHWIVVKRILRYLKGIISWGLRLQPSPST 375

Query: 723 APLSLQAYCDADWASDVDD 779
           + LS+QAYCDADWASD DD
Sbjct: 376 SSLSIQAYCDADWASDPDD 394


>gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 538

 Score =  294 bits (753), Expect = 2e-93
 Identities = 152/259 (58%), Positives = 189/259 (72%)
 Frame = +3

Query: 3   AFLNGFI*EEVYVEQPPGFESYEKPDLVFKLKKAIYGLKQAPRAWYDRLTKTLLGFGFVN 182
           AFLNG + EEVY+ QPPGFES +K  LV KL KAIYGLKQAPRAW+D+L  TL    F  
Sbjct: 137 AFLNGNLQEEVYMSQPPGFESSDKT-LVCKLHKAIYGLKQAPRAWFDKLKTTLFQLNFQI 195

Query: 183 SKCDPSLLVYCTKVCCXXXXXXXXXXXXTGSSTTAVQSLIDKLTTVFALKKFESLDYFLG 362
           SKCDPSL VY                  TG++++ +Q++I +L + F+LK    LD+FLG
Sbjct: 196 SKCDPSLFVYSHDNNVIYILVYVDDIIITGNNSSTLQNIIAQLNSAFSLKDLGRLDFFLG 255

Query: 363 IEVKAVKNGSLILNQSKYIRELLERAGMETAKGISTPLPAKLKLSRFGSNYFEDPSLYRS 542
           IEVK+  +GSL L QSKYIR+LL R  ME +  IS+P+ +  KLSR GS  F D +LYRS
Sbjct: 256 IEVKSNTDGSLTLTQSKYIRDLLNRTNMENSNPISSPMVSGCKLSRTGSEKFLDVTLYRS 315

Query: 543 IVGALQYATITRPEIGYAVNKACQFLSQPLDTHWTAVKRILRYLKGTLDYGLVLKPASTS 722
           +VGALQYATITRPEI ++VNK CQF+S PL+ HW+AVKRILRYLKGT+  GL L+PA ++
Sbjct: 316 VVGALQYATITRPEISFSVNKVCQFMSNPLEQHWSAVKRILRYLKGTMFLGLHLQPAPSN 375

Query: 723 APLSLQAYCDADWASDVDD 779
           +PLS++AYCDADWASD DD
Sbjct: 376 SPLSIRAYCDADWASDPDD 394


>gb|KYP48058.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 539

 Score =  293 bits (751), Expect = 3e-93
 Identities = 148/259 (57%), Positives = 185/259 (71%)
 Frame = +3

Query: 3   AFLNGFI*EEVYVEQPPGFESYEKPDLVFKLKKAIYGLKQAPRAWYDRLTKTLLGFGFVN 182
           AFLNG + E VY++QPPGFE  +   LV KL KA+YGLKQAPR W++RL  TLL FGF  
Sbjct: 136 AFLNGSLNETVYMQQPPGFEVPDST-LVCKLNKALYGLKQAPRQWFERLQYTLLQFGFKA 194

Query: 183 SKCDPSLLVYCTKVCCXXXXXXXXXXXXTGSSTTAVQSLIDKLTTVFALKKFESLDYFLG 362
           SKCDPSL  Y  +               TG+S    Q LID+L ++F+LK+   LDYFLG
Sbjct: 195 SKCDPSLFTYHMQSNIVYLLVYVDDIIITGNSFQFTQQLIDQLNSIFSLKQLGKLDYFLG 254

Query: 363 IEVKAVKNGSLILNQSKYIRELLERAGMETAKGISTPLPAKLKLSRFGSNYFEDPSLYRS 542
           IEV+ ++NGS++L QSKYIR+LL+R  M  A  IS+P+ +  KLS+ GS+   D + YRS
Sbjct: 255 IEVRHLQNGSVLLTQSKYIRDLLQRTNMLEANAISSPMVSSCKLSKHGSDTLADSTFYRS 314

Query: 543 IVGALQYATITRPEIGYAVNKACQFLSQPLDTHWTAVKRILRYLKGTLDYGLVLKPASTS 722
           +VGALQYATITRPE+ +AVNK CQF++ PL++HW AVKRILRYLKGT+ YGL L+PA   
Sbjct: 315 VVGALQYATITRPELSFAVNKVCQFMAHPLESHWNAVKRILRYLKGTMFYGLHLQPARVH 374

Query: 723 APLSLQAYCDADWASDVDD 779
            P SL AYCDADWA+D DD
Sbjct: 375 QPFSLYAYCDADWAADPDD 393


>gb|KYP46114.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 539

 Score =  293 bits (751), Expect = 3e-93
 Identities = 143/259 (55%), Positives = 190/259 (73%)
 Frame = +3

Query: 3   AFLNGFI*EEVYVEQPPGFESYEKPDLVFKLKKAIYGLKQAPRAWYDRLTKTLLGFGFVN 182
           AFLNG + E +Y+ QPPGFE+ +K  LV KL KA+YGLKQAPR W+++L  TL  FGF  
Sbjct: 137 AFLNGTLEETIYMVQPPGFEAGDK-SLVCKLNKALYGLKQAPRQWFNKLKLTLTRFGFQA 195

Query: 183 SKCDPSLLVYCTKVCCXXXXXXXXXXXXTGSSTTAVQSLIDKLTTVFALKKFESLDYFLG 362
           SKCDPSL  Y  +               TGSS+  +Q + ++L ++F+LK+  SLDYFLG
Sbjct: 196 SKCDPSLFQYQHQTHTIFILVYVDDIIITGSSSLLIQQITNQLDSIFSLKQLGSLDYFLG 255

Query: 363 IEVKAVKNGSLILNQSKYIRELLERAGMETAKGISTPLPAKLKLSRFGSNYFEDPSLYRS 542
           IEVK + + SL+L QSKYIR+LL +  +  A G  +P+ +  KLSR G+++F DP+ +RS
Sbjct: 256 IEVKHLPDKSLVLTQSKYIRDLLFKTNLAEAHGAPSPMFSNCKLSRSGNDFFHDPTFFRS 315

Query: 543 IVGALQYATITRPEIGYAVNKACQFLSQPLDTHWTAVKRILRYLKGTLDYGLVLKPASTS 722
           +VGALQYAT+TRPEI +AVNK CQF++ PLD+HW AVKRIL+YLKGTL YGL ++PA+ +
Sbjct: 316 VVGALQYATLTRPEISFAVNKVCQFMATPLDSHWVAVKRILKYLKGTLSYGLHMQPAAVN 375

Query: 723 APLSLQAYCDADWASDVDD 779
            P+SL A+CDADWASD+DD
Sbjct: 376 GPISLTAFCDADWASDIDD 394


>dbj|GAU28846.1| hypothetical protein TSUD_21830 [Trifolium subterraneum]
          Length = 1496

 Score =  309 bits (791), Expect = 6e-93
 Identities = 157/259 (60%), Positives = 193/259 (74%)
 Frame = +3

Query: 3    AFLNGFI*EEVYVEQPPGFESYEKPDLVFKLKKAIYGLKQAPRAWYDRLTKTLLGFGFVN 182
            AFLNG + EEVY++QPPGFES +K  LV KL KA+YGLKQAPRAW+DRL   LL +GF  
Sbjct: 1086 AFLNGNLEEEVYMQQPPGFESSDK-GLVCKLHKALYGLKQAPRAWFDRLKTALLLYGFTA 1144

Query: 183  SKCDPSLLVYCTKVCCXXXXXXXXXXXXTGSSTTAVQSLIDKLTTVFALKKFESLDYFLG 362
            SKCDPSL +  T                TGSS++ +Q LI KL   FALK+ ++LDYFLG
Sbjct: 1145 SKCDPSLFMLKTSSVLMMVLVYVDDIIITGSSSSHIQQLITKLNDEFALKQLDTLDYFLG 1204

Query: 363  IEVKAVKNGSLILNQSKYIRELLERAGMETAKGISTPLPAKLKLSRFGSNYFEDPSLYRS 542
            IEV  + NG+++L+Q+KYIR+LL +  ME+A G+ TP+ + LKLS+ GSN  EDPSLYRS
Sbjct: 1205 IEVFHLDNGNVVLSQAKYIRDLLSKVQMESANGMPTPMVSSLKLSKVGSNPIEDPSLYRS 1264

Query: 543  IVGALQYATITRPEIGYAVNKACQFLSQPLDTHWTAVKRILRYLKGTLDYGLVLKPASTS 722
            IVGALQYAT+TRPEI +AVNK CQFLS PL+ HW AVKRILRYL GTL +GL+L+ A ++
Sbjct: 1265 IVGALQYATLTRPEISFAVNKVCQFLSNPLEDHWKAVKRILRYLSGTLHHGLLLQAAPSN 1324

Query: 723  APLSLQAYCDADWASDVDD 779
             PL L  +CDADWASD DD
Sbjct: 1325 QPLPLVGFCDADWASDPDD 1343


>gb|PNX95703.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 975

 Score =  303 bits (776), Expect = 6e-93
 Identities = 155/259 (59%), Positives = 186/259 (71%)
 Frame = +3

Query: 3    AFLNGFI*EEVYVEQPPGFESYEKPDLVFKLKKAIYGLKQAPRAWYDRLTKTLLGFGFVN 182
            AFLNG + EEVY+EQP GFE+   P +V KL KA+YGLKQAPR W+D+LT TL+ FGF  
Sbjct: 576  AFLNGVLEEEVYMEQPQGFEN-SNPSMVCKLNKALYGLKQAPRQWFDKLTTTLVRFGFQT 634

Query: 183  SKCDPSLLVYCTKVCCXXXXXXXXXXXXTGSSTTAVQSLIDKLTTVFALKKFESLDYFLG 362
            SKCDPSL +                   TGSS+  V SL+ KL +VF+LK+   LDYFLG
Sbjct: 635  SKCDPSLFILNKDNHIVYLLVYVDDIIITGSSSQLVTSLVHKLNSVFSLKQLGLLDYFLG 694

Query: 363  IEVKAVKNGSLILNQSKYIRELLERAGMETAKGISTPLPAKLKLSRFGSNYFEDPSLYRS 542
            IEVK + N +L+L QSKYIR+LL +  M  +  ISTP+ +  KLS+ GS+ F DPSLYRS
Sbjct: 695  IEVKHLPNSTLLLTQSKYIRDLLTKTNMLESNPISTPMMSTCKLSKVGSDKFHDPSLYRS 754

Query: 543  IVGALQYATITRPEIGYAVNKACQFLSQPLDTHWTAVKRILRYLKGTLDYGLVLKPASTS 722
            +VG+LQYATITRPEI YAVNK CQF+S PLD+HWTAVKRILRYLK TL  GLVL P    
Sbjct: 755  VVGSLQYATITRPEIAYAVNKVCQFMSNPLDSHWTAVKRILRYLKETLHMGLVLYPFDVH 814

Query: 723  APLSLQAYCDADWASDVDD 779
             P+SL+ +CDADWASD DD
Sbjct: 815  KPISLKVFCDADWASDPDD 833


>gb|PNX93770.1| histone deacetylase [Trifolium pratense]
          Length = 1453

 Score =  307 bits (787), Expect = 2e-92
 Identities = 152/259 (58%), Positives = 191/259 (73%)
 Frame = +3

Query: 3    AFLNGFI*EEVYVEQPPGFESYEKPDLVFKLKKAIYGLKQAPRAWYDRLTKTLLGFGFVN 182
            AFLNG + EEVY+ QPPGFE+ +K  LV KL K++YGLKQAPRAWY+RLT+ LL  GFV 
Sbjct: 1053 AFLNGLLQEEVYMSQPPGFEATDK-SLVCKLHKSLYGLKQAPRAWYERLTQALLQMGFVT 1111

Query: 183  SKCDPSLLVYCTKVCCXXXXXXXXXXXXTGSSTTAVQSLIDKLTTVFALKKFESLDYFLG 362
            SKCDPSLLV+  +  C            TGS+   +Q LI KL   F+LK+   +DYFLG
Sbjct: 1112 SKCDPSLLVHHQQGACTYVLIYVDDILITGSAPHLIQDLIHKLNIQFSLKQLGEVDYFLG 1171

Query: 363  IEVKAVKNGSLILNQSKYIRELLERAGMETAKGISTPLPAKLKLSRFGSNYFEDPSLYRS 542
            IEV  + +G L+LNQSKYI++LL R  ME  K I +P+ +  +LS+FG++   DPSLYRS
Sbjct: 1172 IEVHHMPSGGLLLNQSKYIKDLLSRTKMENCKAIGSPMVSSCRLSKFGTDSMSDPSLYRS 1231

Query: 543  IVGALQYATITRPEIGYAVNKACQFLSQPLDTHWTAVKRILRYLKGTLDYGLVLKPASTS 722
             VGALQYAT+TRP+I Y+VNK CQF+S PL+THW AVKRILRYLKGT ++GL+L P+ +S
Sbjct: 1232 TVGALQYATLTRPDISYSVNKVCQFMSNPLETHWKAVKRILRYLKGTSNHGLLLHPSPSS 1291

Query: 723  APLSLQAYCDADWASDVDD 779
             P SL+AY DADWA+D DD
Sbjct: 1292 PPFSLRAYSDADWATDQDD 1310