BLASTX nr result

ID: Astragalus24_contig00002929 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00002929
         (414 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606921.1| RNA-binding (RRM/RBD/RNP motif) family prote...    99   1e-23
pdb|4C7Q|A Chain A, Solution Structure Of The Nt. Gr-rbp1 Rrm Do...    97   1e-23
ref|WP_100521816.1| RNA-binding protein, partial [Mycobacterium ...    98   2e-23
ref|XP_009804249.1| PREDICTED: glycine-rich RNA-binding protein-...    98   3e-23
ref|XP_019252028.1| PREDICTED: glycine-rich RNA-binding protein-...    98   4e-23
gb|PNY03359.1| glycine-rich RNA binding protein [Trifolium prate...    97   5e-23
dbj|GAU45386.1| hypothetical protein TSUD_90060 [Trifolium subte...    98   7e-23
ref|WP_079866049.1| RNA-binding protein, partial [Acinetobacter ...    96   7e-23
ref|XP_004289674.1| PREDICTED: glycine-rich RNA-binding protein ...    97   8e-23
ref|XP_016744232.1| PREDICTED: glycine-rich RNA-binding protein ...    96   9e-23
ref|WP_101981441.1| RNA-binding protein [Klebsiella pneumoniae]        97   9e-23
gb|ALM24951.1| glycine-rich RNA-binding protein [Nicotiana tabacum]    97   9e-23
ref|XP_019235651.1| PREDICTED: glycine-rich RNA-binding protein-...    97   1e-22
ref|XP_009774643.1| PREDICTED: glycine-rich RNA-binding protein-...    97   1e-22
ref|XP_024035208.1| glycine-rich RNA-binding protein-like isofor...    96   1e-22
gb|OIF70527.1| hypothetical protein A7M39_18875, partial [Acinet...    96   1e-22
gb|PNY09260.1| glycine-rich RNA binding protein [Trifolium prate...    96   1e-22
ref|XP_004507451.1| PREDICTED: glycine-rich RNA-binding, abscisi...    96   1e-22
ref|XP_017230465.1| PREDICTED: glycine-rich RNA-binding protein ...    96   1e-22
ref|XP_018631357.1| PREDICTED: glycine-rich RNA-binding protein-...    96   1e-22

>ref|XP_003606921.1| RNA-binding (RRM/RBD/RNP motif) family protein [Medicago
           truncatula]
 gb|AES89118.1| RNA-binding (RRM/RBD/RNP motif) family protein [Medicago
           truncatula]
          Length = 164

 Score = 99.4 bits (246), Expect = 1e-23
 Identities = 47/49 (95%), Positives = 49/49 (100%)
 Frame = +2

Query: 62  VINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDIDGRNITVNEAQSR 208
           +INDRETGRSRGFGFVTFADEKSMRDAIEGMNGQD+DGRNITVNEAQSR
Sbjct: 39  IINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDMDGRNITVNEAQSR 87


>pdb|4C7Q|A Chain A, Solution Structure Of The Nt. Gr-rbp1 Rrm Domain
          Length = 86

 Score = 96.7 bits (239), Expect = 1e-23
 Identities = 45/49 (91%), Positives = 48/49 (97%)
 Frame = +2

Query: 62  VINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDIDGRNITVNEAQSR 208
           +INDRETGRSRGFGFVTF DEK+MRDAIEGMNGQD+DGRNITVNEAQSR
Sbjct: 38  IINDRETGRSRGFGFVTFKDEKAMRDAIEGMNGQDLDGRNITVNEAQSR 86


>ref|WP_100521816.1| RNA-binding protein, partial [Mycobacterium abscessus]
          Length = 154

 Score = 98.2 bits (243), Expect = 2e-23
 Identities = 46/49 (93%), Positives = 48/49 (97%)
 Frame = +2

Query: 62  VINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDIDGRNITVNEAQSR 208
           +INDRETGRSRGFGFVTF DEKSMRDAIEGMNGQD+DGRNITVNEAQSR
Sbjct: 26  IINDRETGRSRGFGFVTFGDEKSMRDAIEGMNGQDLDGRNITVNEAQSR 74


>ref|XP_009804249.1| PREDICTED: glycine-rich RNA-binding protein-like [Nicotiana
           sylvestris]
 ref|XP_016461536.1| PREDICTED: glycine-rich RNA-binding protein-like [Nicotiana
           tabacum]
 dbj|BAA03743.1| RNA-binding gricine-rich protein-1c [Nicotiana sylvestris]
          Length = 165

 Score = 98.2 bits (243), Expect = 3e-23
 Identities = 46/49 (93%), Positives = 48/49 (97%)
 Frame = +2

Query: 62  VINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDIDGRNITVNEAQSR 208
           +INDRETGRSRGFGFVTF DEKSMRDAIEGMNGQD+DGRNITVNEAQSR
Sbjct: 37  IINDRETGRSRGFGFVTFGDEKSMRDAIEGMNGQDLDGRNITVNEAQSR 85


>ref|XP_019252028.1| PREDICTED: glycine-rich RNA-binding protein-like [Nicotiana
           attenuata]
 gb|OIS99314.1| glycine-rich rna-binding protein [Nicotiana attenuata]
          Length = 170

 Score = 98.2 bits (243), Expect = 4e-23
 Identities = 46/49 (93%), Positives = 48/49 (97%)
 Frame = +2

Query: 62  VINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDIDGRNITVNEAQSR 208
           +INDRETGRSRGFGFVTF DEKSMRDAIEGMNGQD+DGRNITVNEAQSR
Sbjct: 37  IINDRETGRSRGFGFVTFGDEKSMRDAIEGMNGQDLDGRNITVNEAQSR 85


>gb|PNY03359.1| glycine-rich RNA binding protein [Trifolium pratense]
          Length = 160

 Score = 97.4 bits (241), Expect = 5e-23
 Identities = 46/49 (93%), Positives = 49/49 (100%)
 Frame = +2

Query: 62  VINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDIDGRNITVNEAQSR 208
           +INDRETGRSRGFGFVTFADEKSMRDAIEGMNGQD++GRNITVNEAQSR
Sbjct: 39  IINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDMNGRNITVNEAQSR 87


>dbj|GAU45386.1| hypothetical protein TSUD_90060 [Trifolium subterraneum]
          Length = 195

 Score = 98.2 bits (243), Expect = 7e-23
 Identities = 48/49 (97%), Positives = 48/49 (97%)
 Frame = +2

Query: 62  VINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDIDGRNITVNEAQSR 208
           VINDRETGRSRGFGFVTFA EKSMRDAIEGMNGQDIDGRNITVNEAQSR
Sbjct: 39  VINDRETGRSRGFGFVTFATEKSMRDAIEGMNGQDIDGRNITVNEAQSR 87


>ref|WP_079866049.1| RNA-binding protein, partial [Acinetobacter baumannii]
          Length = 120

 Score = 95.9 bits (237), Expect = 7e-23
 Identities = 45/49 (91%), Positives = 48/49 (97%)
 Frame = +2

Query: 62  VINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDIDGRNITVNEAQSR 208
           +INDRETGRSRGFGFVTF DEKSMRDAIEGMNGQ++DGRNITVNEAQSR
Sbjct: 39  IINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSR 87


>ref|XP_004289674.1| PREDICTED: glycine-rich RNA-binding protein 1-like isoform X2
           [Fragaria vesca subsp. vesca]
          Length = 161

 Score = 97.1 bits (240), Expect = 8e-23
 Identities = 46/56 (82%), Positives = 52/56 (92%)
 Frame = +2

Query: 41  FYYSRQ*VINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDIDGRNITVNEAQSR 208
           F  S+  +INDRETGRSRGFGFVTF++EK+MRDAIEGMNGQD+DGRNITVNEAQSR
Sbjct: 16  FAISQNRIINDRETGRSRGFGFVTFSNEKAMRDAIEGMNGQDLDGRNITVNEAQSR 71


>ref|XP_016744232.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Gossypium
           hirsutum]
          Length = 125

 Score = 95.9 bits (237), Expect = 9e-23
 Identities = 45/49 (91%), Positives = 48/49 (97%)
 Frame = +2

Query: 62  VINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDIDGRNITVNEAQSR 208
           +INDRETGRSRGFGFVTF DEKSMRDAIEGMNGQ++DGRNITVNEAQSR
Sbjct: 54  IINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSR 102


>ref|WP_101981441.1| RNA-binding protein [Klebsiella pneumoniae]
          Length = 167

 Score = 97.1 bits (240), Expect = 9e-23
 Identities = 45/49 (91%), Positives = 49/49 (100%)
 Frame = +2

Query: 62  VINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDIDGRNITVNEAQSR 208
           +INDRETGRSRGFGFVTFADEKSM+DAIEGMNGQD+DGRNITVN+AQSR
Sbjct: 39  IINDRETGRSRGFGFVTFADEKSMKDAIEGMNGQDMDGRNITVNQAQSR 87


>gb|ALM24951.1| glycine-rich RNA-binding protein [Nicotiana tabacum]
          Length = 154

 Score = 96.7 bits (239), Expect = 9e-23
 Identities = 45/49 (91%), Positives = 48/49 (97%)
 Frame = +2

Query: 62  VINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDIDGRNITVNEAQSR 208
           +INDRETGRSRGFGFVTF DEK+MRDAIEGMNGQD+DGRNITVNEAQSR
Sbjct: 37  IINDRETGRSRGFGFVTFKDEKAMRDAIEGMNGQDLDGRNITVNEAQSR 85


>ref|XP_019235651.1| PREDICTED: glycine-rich RNA-binding protein-like [Nicotiana
           attenuata]
 gb|OIT25329.1| glycine-rich rna-binding protein [Nicotiana attenuata]
          Length = 156

 Score = 96.7 bits (239), Expect = 1e-22
 Identities = 45/49 (91%), Positives = 48/49 (97%)
 Frame = +2

Query: 62  VINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDIDGRNITVNEAQSR 208
           +INDRETGRSRGFGFVTF DEK+MRDAIEGMNGQD+DGRNITVNEAQSR
Sbjct: 37  IINDRETGRSRGFGFVTFKDEKAMRDAIEGMNGQDLDGRNITVNEAQSR 85


>ref|XP_009774643.1| PREDICTED: glycine-rich RNA-binding protein-like [Nicotiana
           sylvestris]
 ref|XP_016479391.1| PREDICTED: glycine-rich RNA-binding protein-like [Nicotiana
           tabacum]
 dbj|BAA03741.1| RNA-binding glycine-rich protein-1a [Nicotiana sylvestris]
 gb|ADG03637.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
          Length = 156

 Score = 96.7 bits (239), Expect = 1e-22
 Identities = 45/49 (91%), Positives = 48/49 (97%)
 Frame = +2

Query: 62  VINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDIDGRNITVNEAQSR 208
           +INDRETGRSRGFGFVTF DEK+MRDAIEGMNGQD+DGRNITVNEAQSR
Sbjct: 37  IINDRETGRSRGFGFVTFKDEKAMRDAIEGMNGQDLDGRNITVNEAQSR 85


>ref|XP_024035208.1| glycine-rich RNA-binding protein-like isoform X2 [Citrus
           clementina]
          Length = 134

 Score = 95.9 bits (237), Expect = 1e-22
 Identities = 45/49 (91%), Positives = 48/49 (97%)
 Frame = +2

Query: 62  VINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDIDGRNITVNEAQSR 208
           +INDRETGRSRGFGFVTF DEKSMRDAIEGMNGQ++DGRNITVNEAQSR
Sbjct: 5   IINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSR 53


>gb|OIF70527.1| hypothetical protein A7M39_18875, partial [Acinetobacter baumannii]
          Length = 137

 Score = 95.9 bits (237), Expect = 1e-22
 Identities = 45/49 (91%), Positives = 48/49 (97%)
 Frame = +2

Query: 62  VINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDIDGRNITVNEAQSR 208
           +INDRETGRSRGFGFVTF DEKSMRDAIEGMNGQ++DGRNITVNEAQSR
Sbjct: 56  IINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSR 104


>gb|PNY09260.1| glycine-rich RNA binding protein [Trifolium pratense]
          Length = 153

 Score = 96.3 bits (238), Expect = 1e-22
 Identities = 45/49 (91%), Positives = 49/49 (100%)
 Frame = +2

Query: 62  VINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDIDGRNITVNEAQSR 208
           +INDRETGRSRGFGFVTFADEKSMRDAIEGMNGQ++DGRNITVNEAQ+R
Sbjct: 39  IINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQNMDGRNITVNEAQNR 87


>ref|XP_004507451.1| PREDICTED: glycine-rich RNA-binding, abscisic acid-inducible
           protein-like [Cicer arietinum]
          Length = 155

 Score = 96.3 bits (238), Expect = 1e-22
 Identities = 45/49 (91%), Positives = 49/49 (100%)
 Frame = +2

Query: 62  VINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDIDGRNITVNEAQSR 208
           +INDRETGRSRGFGFVTFA+EKSMRDAIEGMNGQD+DGRNITVNEAQ+R
Sbjct: 39  IINDRETGRSRGFGFVTFANEKSMRDAIEGMNGQDMDGRNITVNEAQNR 87


>ref|XP_017230465.1| PREDICTED: glycine-rich RNA-binding protein [Daucus carota subsp.
           sativus]
 sp|Q03878.1|GRP1_DAUCA RecName: Full=Glycine-rich RNA-binding protein
 emb|CAA41152.1| glycine-rich protein [Daucus carota]
 gb|KZN08920.1| hypothetical protein DCAR_001576 [Daucus carota subsp. sativus]
 prf||1908438A Gly-rich protein
          Length = 157

 Score = 96.3 bits (238), Expect = 1e-22
 Identities = 45/49 (91%), Positives = 48/49 (97%)
 Frame = +2

Query: 62  VINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDIDGRNITVNEAQSR 208
           +INDRETGRSRGFGFVTF DEKSMRDAIEGMNGQ++DGRNITVNEAQSR
Sbjct: 37  IINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQSR 85


>ref|XP_018631357.1| PREDICTED: glycine-rich RNA-binding protein-like isoform X4
           [Nicotiana tomentosiformis]
          Length = 132

 Score = 95.5 bits (236), Expect = 1e-22
 Identities = 44/49 (89%), Positives = 49/49 (100%)
 Frame = +2

Query: 62  VINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDIDGRNITVNEAQSR 208
           +INDRETGRSRGFGFVTF+DEK+MRDAIEGMNGQ++DGRNITVNEAQSR
Sbjct: 38  IINDRETGRSRGFGFVTFSDEKAMRDAIEGMNGQNLDGRNITVNEAQSR 86


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