BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00002258
         (963 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX72142.1| pentatricopeptide repeat-containing protein at3g4...    60   3e-06

>gb|PNX72142.1| pentatricopeptide repeat-containing protein at3g49740-like protein,
           partial [Trifolium pratense]
          Length = 385

 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 47/132 (35%), Positives = 66/132 (50%), Gaps = 6/132 (4%)
 Frame = -1

Query: 480 VQVPSFPLNAIQVQEQSMYYHSNRIRNFDPGGATTFAFPSMVSQSIVFLSFLFQS----- 316
           V++     N I V  QS+  + N+++ FDPGG  +  FP +   S VF+S  F S     
Sbjct: 140 VKIKPLSSNTIDVSAQSISLNLNKLKCFDPGGMISLLFPPI---SSVFISVQFPSTMSLP 196

Query: 315 -PRFYPATFTSLLHSGTFGHMVTSAKHTDFVMLLNSPQVFDEMPKSLVADCNAITTGSID 139
            P   P        S  F  +VT+AKH  F ML +S Q+FDEMPK  +A  + I    +D
Sbjct: 197 IPPEPPDWVAVQSSSLNFSLLVTTAKH--FSMLQSSLQLFDEMPKGHIAVWSVIINRCMD 254

Query: 138 YGLEIIAFVLSK 103
              + + F LSK
Sbjct: 255 -NEQAVEFDLSK 265