BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00002139
         (1876 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNY07796.1| hypothetical protein L195_g004300 [Trifolium prat...   540   0.0  
ref|XP_004495565.1| PREDICTED: rubisco accumulation factor 1, ch...   539   0.0  
ref|XP_007144004.1| hypothetical protein PHAVU_007G121100g [Phas...   538   0.0  
gb|AGV54807.1| hypothetical protein [Phaseolus vulgaris]              536   0.0  
dbj|GAU20552.1| hypothetical protein TSUD_32990 [Trifolium subte...   536   0.0  
ref|XP_020203342.1| rubisco accumulation factor 1.1, chloroplast...   531   0.0  
ref|XP_017410915.1| PREDICTED: rubisco accumulation factor 1, ch...   531   0.0  
ref|XP_018824157.1| PREDICTED: rubisco accumulation factor 1, ch...   530   0.0  
ref|XP_014510931.1| rubisco accumulation factor 1.1, chloroplast...   527   e-180
ref|XP_008370732.1| PREDICTED: rubisco accumulation factor 1, ch...   523   e-178
ref|XP_003590938.1| hypothetical protein MTR_1g079870 [Medicago ...   522   e-178
gb|AFK41237.1| unknown [Medicago truncatula]                          520   e-177
ref|XP_003536143.1| PREDICTED: rubisco accumulation factor 1, ch...   518   e-177
ref|XP_016183986.1| rubisco accumulation factor 1.2, chloroplast...   516   e-176
ref|XP_011465980.1| PREDICTED: LOW QUALITY PROTEIN: rubisco accu...   516   e-176
ref|XP_024189316.1| rubisco accumulation factor 1.1, chloroplast...   516   e-176
ref|XP_002319651.1| hypothetical protein POPTR_0013s04210g [Popu...   516   e-176
ref|XP_009372171.1| PREDICTED: rubisco accumulation factor 1, ch...   515   e-175
ref|XP_008218310.1| PREDICTED: rubisco accumulation factor 1, ch...   514   e-175
ref|XP_011038528.1| PREDICTED: rubisco accumulation factor 1, ch...   513   e-175

>gb|PNY07796.1| hypothetical protein L195_g004300 [Trifolium pratense]
          Length = 449

 Score =  540 bits (1391), Expect = 0.0
 Identities = 284/452 (62%), Positives = 337/452 (74%), Gaps = 12/452 (2%)
 Frame = +2

Query: 116  SAPPCGSATTGVNSLNLKSLSHFTSNISLVSSKFNHRVHSLKPKSGII-------LXXXX 274
            S  PC    T + +LNLKSL +   N+ L+SS  +   H LKP S ++            
Sbjct: 3    SLSPC---ITSITTLNLKSLYNNNRNL-LISSPSSSIHHRLKPISAVLNSSSNRKQQPQN 58

Query: 275  XXXXXXXXXXXXXAPLPSQYRNLDIPGRIDILSNRLGIWYEYAPLISSLIREGFTPSNIE 454
                          PLP ++ NLDIP RIDIL+NRLG+W+EYAPLI+SLIREGF+  +IE
Sbjct: 59   PQKKLYQPFRPPPTPLPPKFDNLDIPARIDILANRLGVWHEYAPLITSLIREGFSSPSIE 118

Query: 455  ESTGISGVEQNRFIVAAQVRDSLVQSNVSPELLSSFDNGGAELLYEIRLLSTSQRASAAR 634
            E+TGISGVEQNR IVA QVRD+LVQ+N   E LS FDNGGAE+LYEIRLLSTSQRA+AAR
Sbjct: 119  ETTGISGVEQNRIIVATQVRDTLVQANTDEETLSFFDNGGAEVLYEIRLLSTSQRAAAAR 178

Query: 635  FIVENKLDGKGAQELARAIKDFPSRRGEKGWESFDYTLPGDCFAFLYYRQGREHKNPSDE 814
            F+VEN+ DGKGAQ+LARAIKDFPSRRGEK WESFDYTLPGDC +++YYRQ +EHKNPSD+
Sbjct: 179  FLVENRCDGKGAQDLARAIKDFPSRRGEKNWESFDYTLPGDCLSYMYYRQSKEHKNPSDQ 238

Query: 815  RTSSLEEALRVAETDKARKTILEELKGSDVAVEE--EAIITKVVVPVVRLKIGEVAEAST 988
            R S+LE AL VAE++KA+K + EEL G   A EE  E +  KV VPVVRL+IGEVAEA++
Sbjct: 239  RDSALELALSVAESEKAKKIVFEELNGKAEADEEEVEVVALKVPVPVVRLQIGEVAEATS 298

Query: 989  VVVLPVCKAQEGEKSILEAPFEVRSEGGFGVVVAEKGWDRWVALPGWEPXXXXXXXXXXX 1168
            VVVLPV KA+EG K I EAP E+R+EG FG+VVAEKGW++WV LPGWEP           
Sbjct: 299  VVVLPVVKAEEGVKVIFEAPTEIRNEGEFGIVVAEKGWEKWVVLPGWEPVVSVGKGGVVV 358

Query: 1169 SFGDARTLPWKVNRWYKEEPILVVTDRSKREVDADDGFYLVKVDEGD---LKVERGSALK 1339
            SF DAR LPWK NRWYKEEP+LVV DR+KR V+ DDGFYLV VDEG+   LKV+RG  LK
Sbjct: 359  SFLDARVLPWKANRWYKEEPVLVVADRNKRVVENDDGFYLV-VDEGNEVGLKVQRGLILK 417

Query: 1340 QIGVNECLGNVVLVVRPPRVEDDGQLSDEDWD 1435
            + GV+ECLGNVVLVVRPP   +D QL +EDWD
Sbjct: 418  ESGVSECLGNVVLVVRPPSENNDDQLGEEDWD 449


>ref|XP_004495565.1| PREDICTED: rubisco accumulation factor 1, chloroplastic [Cicer
            arietinum]
          Length = 456

 Score =  539 bits (1388), Expect = 0.0
 Identities = 289/463 (62%), Positives = 340/463 (73%), Gaps = 19/463 (4%)
 Frame = +2

Query: 104  MLSLSAPPCGSATTGVNSLNLKSLSHFTSNISLVSSKFNHRVHSLKPKSGII-------- 259
            MLSLS  PC    T VN+ NLK  ++  +   L S   NH    LKP S II        
Sbjct: 1    MLSLS--PC---ITSVNTPNLKFPNNNGNFFLLPSPSSNHH-RPLKPISAIINPSSSPRQ 54

Query: 260  ---------LXXXXXXXXXXXXXXXXXAPLPSQYRNLDIPGRIDILSNRLGIWYEYAPLI 412
                                         LP +Y +LDIP R++IL+NRLG+W+EYAPLI
Sbjct: 55   KQQQRQQQQQQQQQPQRQLYQPFRPPPTSLPPKYGDLDIPARLEILANRLGVWHEYAPLI 114

Query: 413  SSLIREGFTPSNIEESTGISGVEQNRFIVAAQVRDSLVQSNVSPELLSSFDNGGAELLYE 592
            +SLIREGFTP  IEE+TGI+GVEQNR IVA QVRDSLV SN   + LS FD GGAE+LYE
Sbjct: 115  TSLIREGFTPPTIEETTGITGVEQNRIIVATQVRDSLVHSNTDDQTLSFFDIGGAEILYE 174

Query: 593  IRLLSTSQRASAARFIVENKLDGKGAQELARAIKDFPSRRGEKGWESFDYTLPGDCFAFL 772
            IRLLSTSQRAS ARFIVEN+ DGKGAQ++AR+IKDFP RRGEKGWESFDYTLPGDC +++
Sbjct: 175  IRLLSTSQRASVARFIVENRFDGKGAQDIARSIKDFPKRRGEKGWESFDYTLPGDCLSYM 234

Query: 773  YYRQGREHKNPSDERTSSLEEALRVAETDKARKTILEELKGSDVAVEEEAIITKVVVPVV 952
            YYRQ REH NPSD+RT++LE AL V +++KA+K ILEEL+G   +V E+ +I KV VPVV
Sbjct: 235  YYRQSREHTNPSDQRTAALELALSVVQSEKAKKVILEELEGKVESVVEDVVI-KVSVPVV 293

Query: 953  RLKIGEVAEASTVVVLPVCKAQEGEKSILEAPFEVRSEGGFGVVVAEKGWDRWVALPGWE 1132
            RLKIGEVAE+S+V+VLPV KA+EG+K ILEAP E+R+EG FGVVVAEKGW+RWV LP W+
Sbjct: 294  RLKIGEVAESSSVIVLPVVKAEEGDKVILEAPSEMRNEGVFGVVVAEKGWERWVVLPSWD 353

Query: 1133 PXXXXXXXXXXXSFGDARTLPWKVNRWYKEEPILVVTDRSKREVDADDGFYLVKV--DEG 1306
            P           SF DAR LPWK N+WYKEEPILVV DRSKREV+ DDGFYLVKV  DE 
Sbjct: 354  PIVNLGKGGVVVSFIDARVLPWKANKWYKEEPILVVADRSKREVENDDGFYLVKVDGDEL 413

Query: 1307 DLKVERGSALKQIGVNECLGNVVLVVRPPRVEDDGQLSDEDWD 1435
             LKV+RG ALK++GV ECLGNVVLVVRPPR ++D QLS+EDWD
Sbjct: 414  GLKVQRGLALKEMGVGECLGNVVLVVRPPREDNDDQLSEEDWD 456


>ref|XP_007144004.1| hypothetical protein PHAVU_007G121100g [Phaseolus vulgaris]
 gb|ESW15998.1| hypothetical protein PHAVU_007G121100g [Phaseolus vulgaris]
          Length = 448

 Score =  538 bits (1385), Expect = 0.0
 Identities = 287/456 (62%), Positives = 337/456 (73%), Gaps = 10/456 (2%)
 Frame = +2

Query: 98   SKMLSLSAPPCGSATTGVNSLNLKSLSHFTSNISLVSSKFNHRVHSLKPKSGIILXXXXX 277
            + MLSLS     S T   ++L   + +H      + S  F +R HS+KP S II      
Sbjct: 5    TNMLSLSP----SVTANTHTLKPSNPNHL---FLITSPSFTNRRHSVKPISAIINPSSFK 57

Query: 278  XXXXXXXXXXXXA------PLPSQYRNLDIPGRIDILSNRLGIWYEYAPLISSLIREGFT 439
                               PLPSQY  LDI GRIDIL+NRLG+WY+YAPLI+SLIREGF+
Sbjct: 58   NPQPPPQQQVYQPFRPPPEPLPSQYSTLDIAGRIDILANRLGLWYQYAPLITSLIREGFS 117

Query: 440  PSNIEESTGISGVEQNRFIVAAQVRDSLVQSNVSPELLSSFDNGGAELLYEIRLLSTSQR 619
            P  IEE+TGI+GVEQNR IVA QVRDSLVQSN  P+LL +F+  GAELLYEIRLLSTSQR
Sbjct: 118  PPTIEETTGITGVEQNRLIVATQVRDSLVQSNADPDLLYAFETSGAELLYEIRLLSTSQR 177

Query: 620  ASAARFIVENKLDGKGAQELARAIKDFPSRRGEKGWESFDYTLPGDCFAFLYYRQGREHK 799
             +AARF+VEN  DGK AQELARA+KDFPSRRG+KGWESFDYTLPGDC +F+YYRQGREHK
Sbjct: 178  VAAARFLVENNCDGKAAQELARAMKDFPSRRGDKGWESFDYTLPGDCLSFMYYRQGREHK 237

Query: 800  NPSDERTSSLEEALRVAETDKARKTILEELKGSDVAVEEEAII--TKVVVPVVRLKIGEV 973
            NPSD+R+S+LE+ALRVAET+KARK +LEEL+G++   EE+ +    +V VPVVRL+IGEV
Sbjct: 238  NPSDQRSSALEQALRVAETEKARKVVLEELEGNE---EEDKVEDGERVRVPVVRLRIGEV 294

Query: 974  AEASTVVVLPVCKAQEGEKSILEAPFEVRSEGGFGVVVAEKGWDRWVALPGWEPXXXXXX 1153
            AEAS+VVVLPVC A+  EK +LEAPFE RSEG FGVVVAEKGW RWV LP WEP      
Sbjct: 295  AEASSVVVLPVCGAE--EKEVLEAPFECRSEGEFGVVVAEKGWARWVVLPWWEPVVGLIK 352

Query: 1154 XXXXXSFGDARTLPWKVNRWYKEEPILVVTDRSKREVDADDGFYLVK--VDEGDLKVERG 1327
                 SF DAR LPWK NRWYKEE +LVV DRSKREV ADDGFYLV    D+G LKVERG
Sbjct: 353  GGVVVSFPDARVLPWKANRWYKEEAVLVVADRSKREVGADDGFYLVNGYGDDGGLKVERG 412

Query: 1328 SALKQIGVNECLGNVVLVVRPPRVEDDGQLSDEDWD 1435
              LK+ G  + LG V+LVVRPP+ E++ QL+DEDW+
Sbjct: 413  LTLKEKGFTQSLGTVLLVVRPPKDENEDQLTDEDWE 448


>gb|AGV54807.1| hypothetical protein [Phaseolus vulgaris]
          Length = 448

 Score =  536 bits (1381), Expect = 0.0
 Identities = 286/456 (62%), Positives = 336/456 (73%), Gaps = 10/456 (2%)
 Frame = +2

Query: 98   SKMLSLSAPPCGSATTGVNSLNLKSLSHFTSNISLVSSKFNHRVHSLKPKSGIILXXXXX 277
            + MLSLS     S T   ++L   + +H      + S  F +R HS+KP S II      
Sbjct: 5    TNMLSLSP----SVTANTHTLKPSNPNHL---FLITSPSFTNRRHSVKPISAIINPSSFK 57

Query: 278  XXXXXXXXXXXXA------PLPSQYRNLDIPGRIDILSNRLGIWYEYAPLISSLIREGFT 439
                               PLPSQY  LDI GRIDIL+NRLG+WY+YAPLI+SLIREGF+
Sbjct: 58   NPQPPPQQQVYQPFRPPPEPLPSQYSTLDIAGRIDILANRLGLWYQYAPLITSLIREGFS 117

Query: 440  PSNIEESTGISGVEQNRFIVAAQVRDSLVQSNVSPELLSSFDNGGAELLYEIRLLSTSQR 619
            P  IEE+TGI+GVEQNR IVA QVRDSLVQSN  P+LL +F+  GAELLYEIRLLSTSQR
Sbjct: 118  PPTIEETTGITGVEQNRLIVATQVRDSLVQSNADPDLLYAFETSGAELLYEIRLLSTSQR 177

Query: 620  ASAARFIVENKLDGKGAQELARAIKDFPSRRGEKGWESFDYTLPGDCFAFLYYRQGREHK 799
             +AARF+VEN  DGKG  ELARA+KDFPSRRG+KGWESFDYTLPGDC +F+YYRQGREHK
Sbjct: 178  VAAARFLVENNCDGKGGAELARAMKDFPSRRGDKGWESFDYTLPGDCLSFMYYRQGREHK 237

Query: 800  NPSDERTSSLEEALRVAETDKARKTILEELKGSDVAVEEEAII--TKVVVPVVRLKIGEV 973
            NPSD+R+S+LE+ALRVAET+KARK +LEEL+G++   EE+ +    +V VPVVRL+IGEV
Sbjct: 238  NPSDQRSSALEQALRVAETEKARKVVLEELEGNE---EEDKVEDGERVRVPVVRLRIGEV 294

Query: 974  AEASTVVVLPVCKAQEGEKSILEAPFEVRSEGGFGVVVAEKGWDRWVALPGWEPXXXXXX 1153
            AEAS+VVVLPVC A+  EK +LEAPFE RSEG FGVVVAEKGW RWV LP WEP      
Sbjct: 295  AEASSVVVLPVCGAE--EKEVLEAPFECRSEGEFGVVVAEKGWARWVVLPWWEPVVGLIK 352

Query: 1154 XXXXXSFGDARTLPWKVNRWYKEEPILVVTDRSKREVDADDGFYLVK--VDEGDLKVERG 1327
                 SF DAR LPWK NRWYKEE +LVV DRSKREV ADDGFYLV    D+G LKVERG
Sbjct: 353  GGVVVSFPDARVLPWKANRWYKEEAVLVVADRSKREVGADDGFYLVNGYGDDGGLKVERG 412

Query: 1328 SALKQIGVNECLGNVVLVVRPPRVEDDGQLSDEDWD 1435
              LK+ G  + LG V+LVVRPP+ E++ QL+DEDW+
Sbjct: 413  LTLKEKGFTQSLGTVLLVVRPPKDENEDQLTDEDWE 448


>dbj|GAU20552.1| hypothetical protein TSUD_32990 [Trifolium subterraneum]
          Length = 449

 Score =  536 bits (1381), Expect = 0.0
 Identities = 278/444 (62%), Positives = 334/444 (75%), Gaps = 13/444 (2%)
 Frame = +2

Query: 143  TGVNSLNLKSLSHFTSNISLVSSKFNHRVHSLKPKSGII--------LXXXXXXXXXXXX 298
            T + +LNLKS+  + +N +L++S F+   H LKP S ++                     
Sbjct: 9    TSITTLNLKSI--YNNNRNLLNSPFSSIHHRLKPISAVLNSSSNRKQQQPTDPQKQLYQP 66

Query: 299  XXXXXAPLPSQYRNLDIPGRIDILSNRLGIWYEYAPLISSLIREGFTPSNIEESTGISGV 478
                  PLPS++ NLDIP RIDIL+NRLG+W+EYAPLI+SLIREGF+  +IEE+TGISGV
Sbjct: 67   FRPPPTPLPSKFENLDIPARIDILANRLGVWHEYAPLITSLIREGFSSPSIEETTGISGV 126

Query: 479  EQNRFIVAAQVRDSLVQSNVSPELLSSFDNGGAELLYEIRLLSTSQRASAARFIVENKLD 658
            EQNR IVA QVRD+LVQ+N   E LS FDNGGAE+LYEIRLLSTSQRA+AA+F+VEN+ D
Sbjct: 127  EQNRIIVATQVRDTLVQANTDEETLSFFDNGGAEVLYEIRLLSTSQRAAAAKFLVENRCD 186

Query: 659  GKGAQELARAIKDFPSRRGEKGWESFDYTLPGDCFAFLYYRQGREHKNPSDERTSSLEEA 838
            GKGAQ+LARAIKDFPSRRGEK WESFDYTLPGDC +++YYRQ +EHKNPSD+R ++L+ A
Sbjct: 187  GKGAQDLARAIKDFPSRRGEKNWESFDYTLPGDCLSYMYYRQSKEHKNPSDQRDAALQLA 246

Query: 839  LRVAETDKARKTILEELKGSDVAVEE--EAIITKVVVPVVRLKIGEVAEASTVVVLPVCK 1012
            L VAE++KA K + EEL G     EE  EA + KV VPVVRL+IGEVAEA++VVVLPV K
Sbjct: 247  LSVAESEKAEKIVFEELNGKTEGDEEEVEAAVLKVPVPVVRLQIGEVAEATSVVVLPVVK 306

Query: 1013 AQEGEKSILEAPFEVRSEGGFGVVVAEKGWDRWVALPGWEPXXXXXXXXXXXSFGDARTL 1192
            A+EG K I EAP EV++EG FG+VV+EKGW++WV LPGWEP           SF DAR L
Sbjct: 307  AEEGVKVIFEAPSEVKNEGEFGIVVSEKGWEKWVVLPGWEPVVNVGKGGVVVSFLDARVL 366

Query: 1193 PWKVNRWYKEEPILVVTDRSKREVDADDGFYLVKVDEGD---LKVERGSALKQIGVNECL 1363
            PWK NRWYKEEPILVV DR+KR V  DDGFYLV VDEG+   LKV+RG  LK+ GV+ECL
Sbjct: 367  PWKANRWYKEEPILVVADRNKRVVKNDDGFYLV-VDEGNEVGLKVQRGLVLKESGVSECL 425

Query: 1364 GNVVLVVRPPRVEDDGQLSDEDWD 1435
            GNVVLVVRPP    D QL +EDWD
Sbjct: 426  GNVVLVVRPPSENTDDQLGEEDWD 449


>ref|XP_020203342.1| rubisco accumulation factor 1.1, chloroplastic-like [Cajanus cajan]
          Length = 441

 Score =  531 bits (1368), Expect = 0.0
 Identities = 276/441 (62%), Positives = 328/441 (74%), Gaps = 7/441 (1%)
 Frame = +2

Query: 134  SATTGVNSLNLKSLSHFTSNISLVSSKFNHRVHSLKPKSGII-----LXXXXXXXXXXXX 298
            S +   N+ NLK +S     +   SS  + R H  KP S ++                  
Sbjct: 5    SPSVTANTRNLKPISPNDHFLCAASSTTHRRHHIPKPISAVLNSSSFSRPPPPQQQVYQP 64

Query: 299  XXXXXAPLPSQYRNLDIPGRIDILSNRLGIWYEYAPLISSLIREGFTPSNIEESTGISGV 478
                 APLPSQY  LD+ GRI++L+NRLG+WYEYAPLI+SLIREGF+P  IEE+TGISGV
Sbjct: 65   FRPPPAPLPSQYGTLDLAGRIEVLANRLGLWYEYAPLITSLIREGFSPPTIEETTGISGV 124

Query: 479  EQNRFIVAAQVRDSLVQSNVSPELLSSFDNGGAELLYEIRLLSTSQRASAARFIVENKLD 658
            EQNR IV AQVR+SLV SN  P++L +F+ GG+ELLYEIRLLS SQR +AARF+V N+ D
Sbjct: 125  EQNRLIVGAQVRESLVSSNADPDVLEAFETGGSELLYEIRLLSASQRVAAARFLVNNRCD 184

Query: 659  GKGAQELARAIKDFPSRRGEKGWESFDYTLPGDCFAFLYYRQGREHKNPSDERTSSLEEA 838
            GK AQELARA+KD+PSRRG+KGWE F+YTLPGDC AF+YYRQ REH+NPSD+R+S+LE+A
Sbjct: 185  GKEAQELARAMKDYPSRRGDKGWERFNYTLPGDCLAFMYYRQSREHQNPSDKRSSALEQA 244

Query: 839  LRVAETDKARKTILEELKGSDVA--VEEEAIITKVVVPVVRLKIGEVAEASTVVVLPVCK 1012
            LRVAET++AR+ +LEE+KG       EEE I+T+  VPVVRL+IGEVAEAS+VVVLPVCK
Sbjct: 245  LRVAETEEARQAVLEEIKGEKQGEKAEEEEIVTR--VPVVRLRIGEVAEASSVVVLPVCK 302

Query: 1013 AQEGEKSILEAPFEVRSEGGFGVVVAEKGWDRWVALPGWEPXXXXXXXXXXXSFGDARTL 1192
            A+E E  ILEAPFE RS+G FGVV+AEKGW RWV LPGWEP           SF DAR L
Sbjct: 303  AEERE--ILEAPFECRSKGEFGVVMAEKGWGRWVVLPGWEPVVGLGDGGVVVSFADARVL 360

Query: 1193 PWKVNRWYKEEPILVVTDRSKREVDADDGFYLVKVDEGDLKVERGSALKQIGVNECLGNV 1372
            PWK NRWYKEEPILVV DRSKREV ADD FYLV ++    KVERG ALK+ GV   LGNV
Sbjct: 361  PWKANRWYKEEPILVVADRSKREVGADDAFYLVNLEGQGFKVERGLALKEGGVTLTLGNV 420

Query: 1373 VLVVRPPRVEDDGQLSDEDWD 1435
            VLVVRPP+ E D QLSD+DW+
Sbjct: 421  VLVVRPPKEEYDDQLSDDDWE 441


>ref|XP_017410915.1| PREDICTED: rubisco accumulation factor 1, chloroplastic-like [Vigna
            angularis]
 gb|KOM30006.1| hypothetical protein LR48_Vigan845s003400 [Vigna angularis]
 dbj|BAT94925.1| hypothetical protein VIGAN_08157600 [Vigna angularis var. angularis]
          Length = 446

 Score =  531 bits (1368), Expect = 0.0
 Identities = 283/446 (63%), Positives = 332/446 (74%), Gaps = 12/446 (2%)
 Frame = +2

Query: 134  SATTGVNSLNLKSLSHFTSNISLVSS-KFNHRVHSLKPKSGIILXXXXXXXXXXXXXXXX 310
            S +   N+L+LK  +   +++ L+SS  F +R HS+KP S II                 
Sbjct: 5    SPSVTANTLSLKPNN--LNDLFLISSPSFTNRRHSIKPISAIINPYSFRNQQPLPPPPQQ 62

Query: 311  XA---------PLPSQYRNLDIPGRIDILSNRLGIWYEYAPLISSLIREGFTPSNIEEST 463
                       PLPSQY NLDI GRIDIL+NRLG+WY+YAPLISSLIREGF+P  IEE+T
Sbjct: 63   QVYQPFRPPPEPLPSQYGNLDIAGRIDILANRLGLWYQYAPLISSLIREGFSPPTIEETT 122

Query: 464  GISGVEQNRFIVAAQVRDSLVQSNVSPELLSSFDNGGAELLYEIRLLSTSQRASAARFIV 643
            GISGVEQNR IVAAQVRDSLV+SN  PELL++F+ GGAELLYEIRLLSTSQR +AA F+V
Sbjct: 123  GISGVEQNRLIVAAQVRDSLVESNADPELLAAFETGGAELLYEIRLLSTSQRVAAALFLV 182

Query: 644  ENKLDGKGAQELARAIKDFPSRRGEKGWESFDYTLPGDCFAFLYYRQGREHKNPSDERTS 823
            EN+ DGK AQELARA+KDFPSRRG+KGWESFDYTLPGDC +F+YYRQGREH+NPS++R+ 
Sbjct: 183  ENRCDGKAAQELARAMKDFPSRRGDKGWESFDYTLPGDCLSFMYYRQGREHRNPSEQRSL 242

Query: 824  SLEEALRVAETDKARKTILEELKGSDVAVEEEAIITKVV-VPVVRLKIGEVAEASTVVVL 1000
            +LE+ALRVA T++AR  +LEEL+ S    +EE  +  V  VPVVRL+IGEVAEAS+VVVL
Sbjct: 243  ALEQALRVAGTERARNVVLEELERSGEEKDEEEDVEGVTRVPVVRLRIGEVAEASSVVVL 302

Query: 1001 PVCKAQEGEKSILEAPFEVRSEGGFGVVVAEKGWDRWVALPGWEPXXXXXXXXXXXSFGD 1180
            PVC A E E  +LEAPFE RSEG FGVVV+EKGW RWV LPGW+P           SF D
Sbjct: 303  PVCAADERE--VLEAPFECRSEGEFGVVVSEKGWGRWVVLPGWDPLVGLGKGGVVVSFAD 360

Query: 1181 ARTLPWKVNRWYKEEPILVVTDRSKREVDADDGFYLVKVDEG-DLKVERGSALKQIGVNE 1357
            AR LPWK NRWYKEE ILVV DRSK EV ADDGFYLV   +G  LKVERG  LK+    +
Sbjct: 361  ARVLPWKANRWYKEEAILVVADRSKIEVGADDGFYLVNGGDGKGLKVERGFTLKEKDFTQ 420

Query: 1358 CLGNVVLVVRPPRVEDDGQLSDEDWD 1435
             LG V+LVVRPP+ EDD QLSDEDW+
Sbjct: 421  SLGTVLLVVRPPKEEDDDQLSDEDWE 446


>ref|XP_018824157.1| PREDICTED: rubisco accumulation factor 1, chloroplastic [Juglans
            regia]
          Length = 443

 Score =  530 bits (1364), Expect = 0.0
 Identities = 267/379 (70%), Positives = 308/379 (81%), Gaps = 5/379 (1%)
 Frame = +2

Query: 314  APLPSQYRNLDIPGRIDILSNRLGIWYEYAPLISSLIREGFTPSNIEESTGISGVEQNRF 493
            +PLP+Q+R+LD+  RIDIL+NRLG+W+EYAPLI +LIREGF+PS+IEESTGISGVEQNR 
Sbjct: 65   SPLPAQFRSLDLSSRIDILANRLGLWFEYAPLIPTLIREGFSPSSIEESTGISGVEQNRL 124

Query: 494  IVAAQVRDSLVQSNVSPELLSSFDNGGAELLYEIRLLSTSQRASAARFIVENKLDGKGAQ 673
            +VAAQVRDSL+QSN  PE+LSSFD GGAELLYEIRLLS  QRA+AA +IVE + D KGAQ
Sbjct: 125  VVAAQVRDSLLQSNTDPEILSSFDTGGAELLYEIRLLSAQQRAAAASYIVEQRFDAKGAQ 184

Query: 674  ELARAIKDFPSRRGEKGWESFDYTLPGDCFAFLYYRQGREHKNPSDERTSSLEEALRVAE 853
            +LARA+KDFP RRG+KGWESFDY LPGDC +F+YYRQ REHK+PS+ERT+SLE+ALRVA+
Sbjct: 185  DLARAMKDFPRRRGDKGWESFDYALPGDCLSFMYYRQSREHKDPSEERTASLEQALRVAQ 244

Query: 854  TDKARKTILEEL--KGSDVAVEEEAIITKVVVPVVRLKIGEVAEASTVVVLPVCKAQEGE 1027
            T+KA+  ILE+L  KG      E  +   V VPVVRLKIGEVAEAS+VVVLPVC+A+E E
Sbjct: 245  TEKAKSRILEDLEGKGEGKGGMEGDMEYGVRVPVVRLKIGEVAEASSVVVLPVCRAEEME 304

Query: 1028 KSILEAPFEVRSEGGFGVVVAEKGWDRWVALPGWEPXXXXXXXXXXXSFGDARTLPWKVN 1207
              ILEAP+E RSEG FGVVVAEK W RWV LPGW P           SFGDAR LPWK N
Sbjct: 305  GGILEAPWECRSEGEFGVVVAEKAWKRWVVLPGWTPVMELGKGGVAVSFGDARALPWKAN 364

Query: 1208 RWYKEEPILVVTDRSKREVDADDGFYLVKVD---EGDLKVERGSALKQIGVNECLGNVVL 1378
            RWYKEE ILVV DR ++EV ADDGFYLV VD    G LKVERGSALK++GV E LG VVL
Sbjct: 365  RWYKEEAILVVADRGRKEVAADDGFYLVAVDSDGRGALKVERGSALKEMGVKESLGTVVL 424

Query: 1379 VVRPPRVEDDGQLSDEDWD 1435
            VVRPPR + D QLSDEDW+
Sbjct: 425  VVRPPREDTDDQLSDEDWE 443


>ref|XP_014510931.1| rubisco accumulation factor 1.1, chloroplastic [Vigna radiata var.
            radiata]
          Length = 446

 Score =  527 bits (1357), Expect = e-180
 Identities = 285/449 (63%), Positives = 331/449 (73%), Gaps = 15/449 (3%)
 Frame = +2

Query: 134  SATTGVNSLNLKSLSHFTSNISLVSS-KFNHRVHSLKPKSGII--------LXXXXXXXX 286
            S +   N+L+LK  +   +++ LVSS  F +R HS KP S II                 
Sbjct: 5    SPSVTANTLSLKPNN--PNDLFLVSSPSFTNRRHSSKPISAIINPSSFRNYRPPPPPQQQ 62

Query: 287  XXXXXXXXXAPLPSQYRNLDIPGRIDILSNRLGIWYEYAPLISSLIREGFTPSNIEESTG 466
                      PLPSQY NLDI GRIDIL++RLG+WY+YAPLISSLIREGF+P  IEE+TG
Sbjct: 63   VYQPFRPPPEPLPSQYGNLDIAGRIDILADRLGLWYQYAPLISSLIREGFSPPTIEETTG 122

Query: 467  ISGVEQNRFIVAAQVRDSLVQSNVSPELLSSFDNGGAELLYEIRLLSTSQRASAARFIVE 646
            ISGVEQNR IVAAQVRDSLV+SN  PELL++FD GGAELLYE+RLLSTSQR +AA F+VE
Sbjct: 123  ISGVEQNRLIVAAQVRDSLVESNADPELLAAFDTGGAELLYELRLLSTSQRVAAALFLVE 182

Query: 647  NKLDGKGAQELARAIKDFPSRRGEKGWESFDYTLPGDCFAFLYYRQGREHKNPSDERTSS 826
            N+ DGK A+ELARA+KDFPSRRG+KGWESFDYTLPGDC +F+YYRQ REH+NPS++RT +
Sbjct: 183  NRCDGKAAKELARAMKDFPSRRGDKGWESFDYTLPGDCLSFMYYRQAREHRNPSEQRTLA 242

Query: 827  LEEALRVAETDKARKTILEELKGS----DVAVEEEAIITKVVVPVVRLKIGEVAEASTVV 994
            LE+ALRVAET++AR  +LEEL+ S    D A + E +     VPVVRL+IGEVAEA +VV
Sbjct: 243  LEQALRVAETERARNLVLEELERSGEEQDEAEDGEGVTR---VPVVRLRIGEVAEARSVV 299

Query: 995  VLPVCKAQEGEKSILEAPFEVRSEGGFGVVVAEKGWDRWVALPGWEPXXXXXXXXXXXSF 1174
            VLPVC A E E  +LEAPFE RSEG FGVVVAEKGW RWVALPGW+P           SF
Sbjct: 300  VLPVCAADERE--VLEAPFECRSEGEFGVVVAEKGWGRWVALPGWDPLVGLGKGGVVVSF 357

Query: 1175 GDARTLPWKVNRWYKEEPILVVTDRSKREVDADDGFYLVK--VDEGDLKVERGSALKQIG 1348
             DAR LPWK NRWY+EE ILVV DRSKREV ADDGFYLV    D   LKVERG  LK+ G
Sbjct: 358  ADARVLPWKANRWYREEAILVVADRSKREVGADDGFYLVNGYGDGKGLKVERGFTLKEKG 417

Query: 1349 VNECLGNVVLVVRPPRVEDDGQLSDEDWD 1435
              + LG V+LVVRPP+ EDD QL DEDWD
Sbjct: 418  FTQSLGAVLLVVRPPKEEDDDQLRDEDWD 446


>ref|XP_008370732.1| PREDICTED: rubisco accumulation factor 1, chloroplastic-like [Malus
            domestica]
          Length = 449

 Score =  523 bits (1346), Expect = e-178
 Identities = 258/378 (68%), Positives = 305/378 (80%), Gaps = 4/378 (1%)
 Frame = +2

Query: 314  APLPSQYRNLDIPGRIDILSNRLGIWYEYAPLISSLIREGFTPSNIEESTGISGVEQNRF 493
            +P+PS++R+LD  GR++IL+NRLG+W+EYAPLI SL +EGFTP  IEE TGISGVEQNR 
Sbjct: 72   SPIPSKFRSLDANGRLEILANRLGLWFEYAPLIPSLTQEGFTPPTIEEITGISGVEQNRL 131

Query: 494  IVAAQVRDSLVQSNVSPELLSSFDNGGAELLYEIRLLSTSQRASAARFIVENKLDGKGAQ 673
            +VAAQVRDSLVQSN  PE++S FD GG+ELLYEIRLLS  QRA+A+RFI+ENKLDGKGAQ
Sbjct: 132  VVAAQVRDSLVQSNTDPEIVSEFDLGGSELLYEIRLLSVQQRAAASRFIIENKLDGKGAQ 191

Query: 674  ELARAIKDFPSRRGEKGWESFDYTLPGDCFAFLYYRQGREHKNPSDERTSSLEEALRVAE 853
            +LAR++KDFP RR EKGWESFDY  PGDC  F+Y+RQGREHKNPS+ RT++LE+AL+VA+
Sbjct: 192  DLARSMKDFPRRRTEKGWESFDYASPGDCLGFMYFRQGREHKNPSEPRTAALEQALKVAQ 251

Query: 854  TDKARKTILEELKG--SDVAVEEEAIITKVVVPVVRLKIGEVAEASTVVVLPVCKAQEGE 1027
            TDKA+K IL+EL+G   D   EEE +   V VPVVRLK GEVAE++ VV+LPVC+A+E +
Sbjct: 252  TDKAKKVILKELEGESEDKEEEEEDVAAGVRVPVVRLKFGEVAESTKVVILPVCRAEEKD 311

Query: 1028 KSILEAPFEVRSEGGFGVVVAEKGWDRWVALPGWEPXXXXXXXXXXXSFGDARTLPWKVN 1207
            K ++EAP+E  SEG  GV+VAEKGW RWV LPGWEP           SF DAR LPWK N
Sbjct: 312  KEVMEAPWECTSEGELGVMVAEKGWKRWVVLPGWEPVVSLGKGGVVVSFSDARVLPWKAN 371

Query: 1208 RWYKEEPILVVTDRSKREVDADDGFYLVKVD-EG-DLKVERGSALKQIGVNECLGNVVLV 1381
            RWYKEEPILVV DRSKREV+ADDGFYL   D EG   KV RGSALK+ GV E LG VVL+
Sbjct: 372  RWYKEEPILVVADRSKREVEADDGFYLAAXDGEGLGFKVVRGSALKEAGVEESLGTVVLI 431

Query: 1382 VRPPRVEDDGQLSDEDWD 1435
            VRPPR E D QLSDEDW+
Sbjct: 432  VRPPRDETDDQLSDEDWE 449


>ref|XP_003590938.1| hypothetical protein MTR_1g079870 [Medicago truncatula]
 gb|AES61189.1| hypothetical protein MTR_1g079870 [Medicago truncatula]
          Length = 449

 Score =  522 bits (1345), Expect = e-178
 Identities = 279/450 (62%), Positives = 329/450 (73%), Gaps = 13/450 (2%)
 Frame = +2

Query: 125  PCGSATTGVNSLNLKSLSHFTSNISLVSSKF----------NHRVHSLKPKSGIILXXXX 274
            PC S+   VN+LNLK L+   S+ +L  S +          N   HS K +         
Sbjct: 4    PCISS---VNTLNLKFLNIPPSSSNLNRSFYRFKSISAVLNNPSSHSKKQRQVQQQQQQQ 60

Query: 275  XXXXXXXXXXXXXAPLPSQYRNLDIPGRIDILSNRLGIWYEYAPLISSLIREGFTPSNIE 454
                          PLPS+Y NLDIPGRIDIL+NRLG W+EYAPLI+SL+REGF+P  +E
Sbjct: 61   PQKQLYQPFRPPPTPLPSKYDNLDIPGRIDILANRLGAWHEYAPLITSLLREGFSPPTLE 120

Query: 455  ESTGISGVEQNRFIVAAQVRDSLVQSNVSPELLSSFDNGGAELLYEIRLLSTSQRASAAR 634
            E+TGI+GVEQNR IVA QVRD+LVQ+N   E+LS FD+GGAE+LYEIRLLSTSQRA+AAR
Sbjct: 121  ETTGITGVEQNRIIVATQVRDTLVQANTDEEILSYFDSGGAEVLYEIRLLSTSQRAAAAR 180

Query: 635  FIVENKLDGKGAQELARAIKDFPSRRGEKGWESFDYTLPGDCFAFLYYRQGREHKNPSDE 814
            FIVE + DGKGAQ+LAR+IKDFPSRRGEK WESFDY LPGDC A+LYYRQ +E+KNPSD 
Sbjct: 181  FIVEKRYDGKGAQDLARSIKDFPSRRGEKHWESFDYHLPGDCLAYLYYRQSKENKNPSDP 240

Query: 815  RTSSLEEALRVAETDKARKTILEELKGSDVAVEEEAIITKVVVPVVRLKIGEVAEASTVV 994
            RT+ L++AL   E+DKAR  ILEEL G     + E ++ KV V VVRLKIGEVAEA++VV
Sbjct: 241  RTAFLQQALSAVESDKARNVILEELNGKAEEEKVEDVVLKVPVNVVRLKIGEVAEATSVV 300

Query: 995  VLPVCKAQEGEKSILEAPFEVRSEGGFGVVVAEKGWDRWVALPGWEPXXXXXXXXXXXSF 1174
            VLPVCKA+EGE+ I+EAP E+R EG FG+VVAEKGW++WV LP W P           SF
Sbjct: 301  VLPVCKAEEGERVIMEAPSEIRKEGEFGIVVAEKGWEKWVVLPAWGP-VVNLGKGVVVSF 359

Query: 1175 GDARTLPWKV-NRWYKEEPILVVTDRSKREVDADDGFYLVKVDEGD--LKVERGSALKQI 1345
             DAR LPWK  NRW KEEPILVV DRSKREV+ DDGFYLVK D  D  LKV+RGS LK++
Sbjct: 360  LDARVLPWKANNRWCKEEPILVVADRSKREVENDDGFYLVKDDGNDVGLKVQRGSILKEM 419

Query: 1346 GVNECLGNVVLVVRPPRVEDDGQLSDEDWD 1435
            GVNECLGNVV+VVRPP   D   LS+EDWD
Sbjct: 420  GVNECLGNVVIVVRPPTENDGDMLSEEDWD 449


>gb|AFK41237.1| unknown [Medicago truncatula]
          Length = 449

 Score =  520 bits (1339), Expect = e-177
 Identities = 277/450 (61%), Positives = 328/450 (72%), Gaps = 13/450 (2%)
 Frame = +2

Query: 125  PCGSATTGVNSLNLKSLSHFTSNISLVSSKFNHRV----------HSLKPKSGIILXXXX 274
            PC S+   VN+LNLK L+   S+ +L  S +  +           HS K +         
Sbjct: 4    PCISS---VNTLNLKFLNIPPSSSNLNRSFYRFKSISAVLNSPSSHSKKQRQVQQQQQQQ 60

Query: 275  XXXXXXXXXXXXXAPLPSQYRNLDIPGRIDILSNRLGIWYEYAPLISSLIREGFTPSNIE 454
                          PLPS+Y NLDIPGRIDIL+NRLG W+EYAPLI+SL+REGF+P  +E
Sbjct: 61   PQKQLYQPFRPPPTPLPSKYDNLDIPGRIDILANRLGAWHEYAPLITSLLREGFSPPTLE 120

Query: 455  ESTGISGVEQNRFIVAAQVRDSLVQSNVSPELLSSFDNGGAELLYEIRLLSTSQRASAAR 634
            E+TGI+GVEQNR IVA QVRD+LVQ+N   E+LS FD+GGAE+LYEIRLLSTSQRA+AAR
Sbjct: 121  ETTGITGVEQNRIIVATQVRDTLVQANTDEEILSYFDSGGAEVLYEIRLLSTSQRAAAAR 180

Query: 635  FIVENKLDGKGAQELARAIKDFPSRRGEKGWESFDYTLPGDCFAFLYYRQGREHKNPSDE 814
            FIVE + DGKGAQ+LAR+IKDFPSRRGEK WESFDY LPGDC A+LYYRQ +E+KNPSD 
Sbjct: 181  FIVEKRYDGKGAQDLARSIKDFPSRRGEKHWESFDYHLPGDCLAYLYYRQSKENKNPSDP 240

Query: 815  RTSSLEEALRVAETDKARKTILEELKGSDVAVEEEAIITKVVVPVVRLKIGEVAEASTVV 994
            RT+ L++AL   E+DKAR  ILEEL G     + E ++ KV V VVRLKIGEVAEA++VV
Sbjct: 241  RTAFLQQALSAVESDKARNVILEELSGKAEEEKVEDVVLKVPVNVVRLKIGEVAEATSVV 300

Query: 995  VLPVCKAQEGEKSILEAPFEVRSEGGFGVVVAEKGWDRWVALPGWEPXXXXXXXXXXXSF 1174
            VLPVCKA+EGE+ I+E P E+R EG FG+VVAEKGW++WV LP W P           SF
Sbjct: 301  VLPVCKAEEGERVIMETPSEIRKEGEFGIVVAEKGWEKWVVLPAWGP-VVNLGKGVVVSF 359

Query: 1175 GDARTLPWKV-NRWYKEEPILVVTDRSKREVDADDGFYLVKVDEGD--LKVERGSALKQI 1345
             DAR LPWK  NRW KEEPILVV DRSKREV+ DDGFYLVK D  D  LKV+RGS LK++
Sbjct: 360  LDARVLPWKANNRWCKEEPILVVADRSKREVENDDGFYLVKDDGNDVGLKVQRGSILKEM 419

Query: 1346 GVNECLGNVVLVVRPPRVEDDGQLSDEDWD 1435
            GVNECLGNVV+VVRPP   D   LS+EDWD
Sbjct: 420  GVNECLGNVVIVVRPPTENDGDMLSEEDWD 449


>ref|XP_003536143.1| PREDICTED: rubisco accumulation factor 1, chloroplastic-like [Glycine
            max]
 gb|KRH34160.1| hypothetical protein GLYMA_10G166900 [Glycine max]
          Length = 439

 Score =  518 bits (1333), Expect = e-177
 Identities = 280/453 (61%), Positives = 328/453 (72%), Gaps = 9/453 (1%)
 Frame = +2

Query: 104  MLSLSAPPCGSATTGVNSLNLKSLS------HFTSNISLV--SSKFNHRVHSLKPKSGII 259
            MLSLS PP        N L L S S      +F   IS V  SS F      L P+  + 
Sbjct: 1    MLSLSVPPLNLKPITPNDLFLSSASPSPHRRYFVKPISAVLNSSSFKKPEQPLLPQHQVY 60

Query: 260  LXXXXXXXXXXXXXXXXXAPLPSQYRNLDIPGRIDILSNRLGIWYEYAPLISSLIREGFT 439
                              +PLPSQ+  LDI GRIDIL+NRLG+WYEYAPLI+SLIREGF+
Sbjct: 61   -----------QPFRPPPSPLPSQFGTLDIAGRIDILANRLGLWYEYAPLINSLIREGFS 109

Query: 440  PSNIEESTGISGVEQNRFIVAAQVRDSLVQSNVSPELLSSFDNGGAELLYEIRLLSTSQR 619
            P  IEE+TGISGVEQNR IV AQVRDSLV S   P+LL++F+ GGAELLYEIRLLS SQR
Sbjct: 110  PPTIEETTGISGVEQNRLIVGAQVRDSLVHSKADPDLLAAFETGGAELLYEIRLLSASQR 169

Query: 620  ASAARFIVENKLDGKGAQELARAIKDFPSRRGEKGWESFDYTLPGDCFAFLYYRQGREHK 799
             +AARF+VEN+ DGK AQELAR++KDFPSRRG+KGW  FDYTLPGDC +F+YYRQ REH+
Sbjct: 170  VAAARFLVENRCDGKAAQELARSMKDFPSRRGDKGWARFDYTLPGDCLSFMYYRQSREHR 229

Query: 800  NPSDERTSSLEEALRVAETDKARKTILEELKGS-DVAVEEEAIITKVVVPVVRLKIGEVA 976
            NPS++RTS+LE+ALRVAET+ AR  ILEEL+G+ +   + +A    V VPVVRL+IGEVA
Sbjct: 230  NPSEQRTSALEQALRVAETEAARNMILEELEGNGEEGDKVDAGEGAVRVPVVRLRIGEVA 289

Query: 977  EASTVVVLPVCKAQEGEKSILEAPFEVRSEGGFGVVVAEKGWDRWVALPGWEPXXXXXXX 1156
            EAS+VVVLPV  A+E E  ILEAP+E RS+G FGVVVAEKGW +WV LP W+P       
Sbjct: 290  EASSVVVLPVSAAEERE--ILEAPYESRSQGVFGVVVAEKGWGKWVVLPSWDPVVGLGKG 347

Query: 1157 XXXXSFGDARTLPWKVNRWYKEEPILVVTDRSKREVDADDGFYLVKVDEGDLKVERGSAL 1336
                SF DAR LPWKVNRWYKEEPILVV DRSK+EV ADDGFYLV  D   LKVERGS L
Sbjct: 348  GVVVSFPDARVLPWKVNRWYKEEPILVVADRSKKEVGADDGFYLVNADGEGLKVERGSGL 407

Query: 1337 KQIGVNECLGNVVLVVRPPRVEDDGQLSDEDWD 1435
            K+ G  + LG V+LVVRPP+ E+D +LSDEDW+
Sbjct: 408  KEKGFTQSLGTVLLVVRPPKEEND-ELSDEDWE 439


>ref|XP_016183986.1| rubisco accumulation factor 1.2, chloroplastic [Arachis ipaensis]
          Length = 447

 Score =  516 bits (1329), Expect = e-176
 Identities = 258/377 (68%), Positives = 304/377 (80%), Gaps = 3/377 (0%)
 Frame = +2

Query: 314  APLPSQYRNLDIPGRIDILSNRLGIWYEYAPLISSLIREGFTPSNIEESTGISGVEQNRF 493
            +PLPSQ+  LD  GRI++L+NRLG W+EYAPLISSLI++GFTP +IEE TGISGVEQNR 
Sbjct: 71   SPLPSQFATLDTAGRIEVLANRLGTWHEYAPLISSLIQDGFTPPSIEELTGISGVEQNRL 130

Query: 494  IVAAQVRDSLVQSNVSPELLSSFDNGGAELLYEIRLLSTSQRASAARFIVENKLDGKGAQ 673
            +VAAQVR+SL QSN  P++LS+FD  GAE+LYEIRLLS SQR++AAR+IV+NK DGKGAQ
Sbjct: 131  VVAAQVRESLQQSNTDPDVLSAFDTSGAEILYEIRLLSASQRSAAARYIVDNKFDGKGAQ 190

Query: 674  ELARAIKDFPSRRGEKGWESFDYTLPGDCFAFLYYRQGREHKNPSDERTSSLEEALRVAE 853
             LARA+KDFP RRGEKGWESFDYTLPGDC +F+YYRQ REHKNPSD+RTS+LE+AL+VA 
Sbjct: 191  NLARAMKDFPGRRGEKGWESFDYTLPGDCLSFMYYRQSREHKNPSDQRTSALEQALKVAV 250

Query: 854  TDKARKTILEELKGSDVAVEEEA--IITKVVVPVVRLKIGEVAEASTVVVLPVCKAQEGE 1027
            T+KA+ T+LEELKG     EE+   +   V+VPVVRLK GEVAEA++V+VLPVCKA++GE
Sbjct: 251  TEKAKNTVLEELKGEGDTDEEKGNEVGRGVLVPVVRLKYGEVAEATSVIVLPVCKAEKGE 310

Query: 1028 KSILEAPFEVRSEGGFGVVVAEKGWDRWVALPGWEPXXXXXXXXXXXSFGDARTLPWKVN 1207
            K ++EAPFE RSEG F +V AEK W  WV LP WEP           SF DAR LPWKVN
Sbjct: 311  KEVMEAPFECRSEGEFRIVRAEKAWGSWVVLPRWEPVATMGRGGVVVSFVDARILPWKVN 370

Query: 1208 RWYKEEPILVVTDRSKREVDADDGFYLVKVDEGD-LKVERGSALKQIGVNECLGNVVLVV 1384
            R+YKEEPILVV DR   EV ADDGFYL KVD  D L V+RGSALK+ GV E LG VVLVV
Sbjct: 371  RYYKEEPILVVADRENTEVVADDGFYLAKVDGHDGLMVQRGSALKENGVKESLGMVVLVV 430

Query: 1385 RPPRVEDDGQLSDEDWD 1435
            RPP+ + D QLSDEDW+
Sbjct: 431  RPPKDDTDDQLSDEDWN 447


>ref|XP_011465980.1| PREDICTED: LOW QUALITY PROTEIN: rubisco accumulation factor 1,
            chloroplastic [Fragaria vesca subsp. vesca]
          Length = 442

 Score =  516 bits (1328), Expect = e-176
 Identities = 262/449 (58%), Positives = 319/449 (71%), Gaps = 2/449 (0%)
 Frame = +2

Query: 95   TSKMLSLSAPPCGSATTGVNSLNLKSLSHFTSNISLVSSKFNHRVHSLKPKSGIILXXXX 274
            TS  L  +  P  S TT +N      L H   ++  +S+   H     KP   +      
Sbjct: 5    TSSTLKPTFSPFTSTTTFLNPHQPPRLLHPKPSLKPISASIQHLPSHPKPNQQVY----- 59

Query: 275  XXXXXXXXXXXXXAPLPSQYRNLDIPGRIDILSNRLGIWYEYAPLISSLIREGFTPSNIE 454
                         +P+P QY +LD+ GR++IL+NRLG+WYEYAPLI SL+++GFTP  IE
Sbjct: 60   ------QPFRPPPSPIPEQYSSLDVNGRLEILANRLGLWYEYAPLIPSLLQQGFTPPTIE 113

Query: 455  ESTGISGVEQNRFIVAAQVRDSLVQSNVSPELLSSFDNGGAELLYEIRLLSTSQRASAAR 634
            E TGISGVEQNR +VAAQVR+SL+ S   PE+++ FD GG+ELLYEIRLLS  QRA+AAR
Sbjct: 114  EITGISGVEQNRLVVAAQVRESLIHSKTDPEIMAEFDTGGSELLYEIRLLSVQQRAAAAR 173

Query: 635  FIVENKLDGKGAQELARAIKDFPSRRGEKGWESFDYTLPGDCFAFLYYRQGREHKNPSDE 814
            FIVE KLD KGA +LARA KDFP RRG+KGWESFDYT PGDC AF+YYRQ REH + S+ 
Sbjct: 174  FIVEKKLDAKGAGDLARATKDFPRRRGDKGWESFDYTNPGDCLAFMYYRQAREHNDMSET 233

Query: 815  RTSSLEEALRVAETDKARKTILEELKGSDVAVEEEAIITKVVVPVVRLKIGEVAEASTVV 994
            RT +LEEAL+V  ++KAR  I+ EL+G+ V  EEE ++  V VPVVRLK GEV E+S VV
Sbjct: 234  RTDALEEALKVVGSEKARSVIVRELEGASVRDEEEEVVAVVKVPVVRLKFGEVGESSRVV 293

Query: 995  VLPVCKAQEGEKSILEAPFEVRSEGGFGVVVAEKGWDRWVALPGWEPXXXXXXXXXXXSF 1174
            VLPVCKA+E +K ++EAP+E  SEG  GVVVAEKGW RWV LPGWEP           SF
Sbjct: 294  VLPVCKAEEKDKEVMEAPWECESEGELGVVVAEKGWKRWVVLPGWEPVVGLGKGGVVVSF 353

Query: 1175 GDARTLPWKVNRWYKEEPILVVTDRSKREVDADDGFYLVKVD-EG-DLKVERGSALKQIG 1348
             DAR LPWKVNRWYKEEPILVV DRSK+EV+ADDGFYL  VD EG   KVERGSALK+ G
Sbjct: 354  SDARVLPWKVNRWYKEEPILVVADRSKKEVEADDGFYLAAVDGEGLGFKVERGSALKEAG 413

Query: 1349 VNECLGNVVLVVRPPRVEDDGQLSDEDWD 1435
            V E LG VVL+VRPP+ + + +L++EDW+
Sbjct: 414  VKESLGTVVLIVRPPKDDTENELAEEDWE 442


>ref|XP_024189316.1| rubisco accumulation factor 1.1, chloroplastic-like [Rosa chinensis]
          Length = 448

 Score =  516 bits (1328), Expect = e-176
 Identities = 249/377 (66%), Positives = 302/377 (80%), Gaps = 3/377 (0%)
 Frame = +2

Query: 314  APLPSQYRNLDIPGRIDILSNRLGIWYEYAPLISSLIREGFTPSNIEESTGISGVEQNRF 493
            +P+P +YR+LD  GR++IL+NRLG+WYE APLI SL+++GFTP  IEE TG+S VEQNR 
Sbjct: 72   SPIPEKYRSLDANGRLEILANRLGLWYELAPLIPSLLQQGFTPPTIEEITGMSSVEQNRL 131

Query: 494  IVAAQVRDSLVQSNVSPELLSSFDNGGAELLYEIRLLSTSQRASAARFIVENKLDGKGAQ 673
            +VAA+VRDSL+ S   PE+++ FD GG+ELLYEIRLLS  QRA+AARFI+E KLD KGA+
Sbjct: 132  VVAAKVRDSLIHSKTDPEIVAEFDTGGSELLYEIRLLSVQQRAAAARFILEKKLDAKGAE 191

Query: 674  ELARAIKDFPSRRGEKGWESFDYTLPGDCFAFLYYRQGREHKNPSDERTSSLEEALRVAE 853
            +LARA KDFP RRG+KGWESFDYT PGDC AF+YYRQ REHKNPS+ RTS+LEEAL+V E
Sbjct: 192  DLARATKDFPRRRGDKGWESFDYTHPGDCLAFMYYRQAREHKNPSEPRTSALEEALKVVE 251

Query: 854  TDKARKTILEELKGSDVAVEEEA-IITKVVVPVVRLKIGEVAEASTVVVLPVCKAQEGEK 1030
            ++KAR  IL+EL G     EEE  ++  V VPVVRL+ GEVAE+S VV+LPVCKA+E +K
Sbjct: 252  SEKARNVILKELGGESGESEEEGDVVAGVKVPVVRLQFGEVAESSRVVILPVCKAEEKDK 311

Query: 1031 SILEAPFEVRSEGGFGVVVAEKGWDRWVALPGWEPXXXXXXXXXXXSFGDARTLPWKVNR 1210
             ++EAP+E  SEG FGVVVAEKGW RWV LPGWEP           SF DAR LPWKVNR
Sbjct: 312  EVMEAPWECESEGEFGVVVAEKGWKRWVVLPGWEPVVGLGKGGVVVSFSDARVLPWKVNR 371

Query: 1211 WYKEEPILVVTDRSKREVDADDGFYLVKVDEGDL--KVERGSALKQIGVNECLGNVVLVV 1384
            WYKEEPILVV DRSK++V+ADDGFYL  +D GD+  KVERGSALK+ GV E LG VVL+V
Sbjct: 372  WYKEEPILVVADRSKKDVEADDGFYLAAMDGGDMGFKVERGSALKEAGVTESLGTVVLIV 431

Query: 1385 RPPRVEDDGQLSDEDWD 1435
            RPP+ E + +L+DEDW+
Sbjct: 432  RPPKDETENELADEDWE 448


>ref|XP_002319651.1| hypothetical protein POPTR_0013s04210g [Populus trichocarpa]
 gb|PNT06680.1| hypothetical protein POPTR_013G044900v3 [Populus trichocarpa]
          Length = 451

 Score =  516 bits (1328), Expect = e-176
 Identities = 254/378 (67%), Positives = 304/378 (80%), Gaps = 4/378 (1%)
 Frame = +2

Query: 314  APLPSQYRNLDIPGRIDILSNRLGIWYEYAPLISSLIREGFTPSNIEESTGISGVEQNRF 493
            +P+PSQY++LD P R++ILSNRLG+WYEYAPLI SL +EGFTP +IEE+TGISGVEQNR 
Sbjct: 74   SPIPSQYKSLDAPSRLEILSNRLGLWYEYAPLIPSLFQEGFTPPSIEEATGISGVEQNRL 133

Query: 494  IVAAQVRDSLVQSNVSPELLSSFDNGGAELLYEIRLLSTSQRASAARFIVENKLDGKGAQ 673
            +V AQVRDSLVQSN  PE+++SFD GGAELLYEIRLLS +QR++AARFIV NK+D KGAQ
Sbjct: 134  VVGAQVRDSLVQSNTDPEIVASFDLGGAELLYEIRLLSATQRSAAARFIVVNKMDTKGAQ 193

Query: 674  ELARAIKDFPSRRGEKGWESFDYTLPGDCFAFLYYRQGREHKNPSDERTSSLEEALRVAE 853
            +LARA+KDFP RRG+K WESFDY LPGDC +F+YYRQ REHKNPS+ RT++L+ AL VAE
Sbjct: 194  DLARAMKDFPRRRGDKFWESFDYVLPGDCLSFMYYRQSREHKNPSESRTNALQMALEVAE 253

Query: 854  TDKARKTILEELKGSDVAVE--EEAIITKVVVPVVRLKIGEVAEASTVVVLPVCKAQEGE 1027
            ++KA+  IL+EL+G     E  E      V VPVVRLKIGEVAEA++VVVLPVC++++GE
Sbjct: 254  SEKAKSAILKELEGGGERKERAEGETADGVRVPVVRLKIGEVAEATSVVVLPVCRSEDGE 313

Query: 1028 KSILEAPFEVRSEGGFGVVVAEKGWDRWVALPGWEPXXXXXXXXXXXSFGDARTLPWKVN 1207
            + I+EAP+E + +G FGVVVAEK W+RWV LPGWEP           +F DAR LPWK N
Sbjct: 314  RKIVEAPWECKGQGEFGVVVAEKAWERWVVLPGWEPVLGLGRGGVAVAFPDARVLPWKAN 373

Query: 1208 RWYKEEPILVVTDRSKREVDADDGFYLVKVD--EGDLKVERGSALKQIGVNECLGNVVLV 1381
            RWYKEE ILVV DR  +EV ADDGFYLV +D   GD KVERGSALK+  V ECLG V+LV
Sbjct: 374  RWYKEESILVVADRGSKEVKADDGFYLVTLDGAGGDFKVERGSALKERNVVECLGTVLLV 433

Query: 1382 VRPPRVEDDGQLSDEDWD 1435
            VRPPR E D QLSDEDW+
Sbjct: 434  VRPPRYETDDQLSDEDWE 451


>ref|XP_009372171.1| PREDICTED: rubisco accumulation factor 1, chloroplastic-like, partial
            [Pyrus x bretschneideri]
          Length = 450

 Score =  515 bits (1326), Expect = e-175
 Identities = 255/377 (67%), Positives = 304/377 (80%), Gaps = 3/377 (0%)
 Frame = +2

Query: 314  APLPSQYRNLDIPGRIDILSNRLGIWYEYAPLISSLIREGFTPSNIEESTGISGVEQNRF 493
            +P+PS++R+LD  GR++IL+NRLG+W+EYAPLI SL +EGFTP  IEE TGISGVEQNR 
Sbjct: 74   SPIPSKFRSLDANGRLEILANRLGLWFEYAPLIPSLTQEGFTPPTIEEITGISGVEQNRL 133

Query: 494  IVAAQVRDSLVQSNVSPELLSSFDNGGAELLYEIRLLSTSQRASAARFIVENKLDGKGAQ 673
            +VAAQVRDSLVQSN  PE++S FD GG+ELLYEIRLLS  QRA+AARFIVENKLD +GAQ
Sbjct: 134  VVAAQVRDSLVQSNTDPEIVSEFDLGGSELLYEIRLLSVQQRAAAARFIVENKLDAEGAQ 193

Query: 674  ELARAIKDFPSRRGEKGWESFDYTLPGDCFAFLYYRQGREHKNPSDERTSSLEEALRVAE 853
            +LAR++KDFP RR EKGWESFDY   GDC  F+Y+RQGREHKNPS+ RT++LE+AL+VA+
Sbjct: 194  DLARSMKDFPRRRTEKGWESFDYASAGDCLGFMYFRQGREHKNPSEPRTAALEQALKVAQ 253

Query: 854  TDKARKTILEELKG-SDVAVEEEAIITKVVVPVVRLKIGEVAEASTVVVLPVCKAQEGEK 1030
            TDKA+K IL+EL+G S+   +EE +   V VPVVRLK GEVAE++ VV+LPVC+A+E +K
Sbjct: 254  TDKAKKVILKELEGESEDKEKEEDVAVGVRVPVVRLKFGEVAESTKVVILPVCRAEEKDK 313

Query: 1031 SILEAPFEVRSEGGFGVVVAEKGWDRWVALPGWEPXXXXXXXXXXXSFGDARTLPWKVNR 1210
             ++EAP+E   EG  GV+VAEKGW RWV LPGWEP           SF DAR LPWKVNR
Sbjct: 314  EVMEAPWECTGEGELGVMVAEKGWKRWVVLPGWEPVVSLGKGGVVVSFSDARVLPWKVNR 373

Query: 1211 WYKEEPILVVTDRSKREVDADDGFYLVKVD-EG-DLKVERGSALKQIGVNECLGNVVLVV 1384
            WY+EEPILVV DRSKREV+ADDGFYL  VD EG   KV RGSAL   GV ECLG VVL+V
Sbjct: 374  WYQEEPILVVADRSKREVEADDGFYLAAVDGEGLGFKVVRGSALTAAGVEECLGTVVLIV 433

Query: 1385 RPPRVEDDGQLSDEDWD 1435
            RPPR E D QLS+EDW+
Sbjct: 434  RPPRHETDDQLSEEDWE 450


>ref|XP_008218310.1| PREDICTED: rubisco accumulation factor 1, chloroplastic [Prunus mume]
          Length = 450

 Score =  514 bits (1325), Expect = e-175
 Identities = 253/378 (66%), Positives = 302/378 (79%), Gaps = 4/378 (1%)
 Frame = +2

Query: 314  APLPSQYRNLDIPGRIDILSNRLGIWYEYAPLISSLIREGFTPSNIEESTGISGVEQNRF 493
            +P+P+++R+LD  GRI+ILSNRLG+WYE+APLI SL++EGFTP  IEE+TGISGVEQNR 
Sbjct: 73   SPVPAKFRSLDANGRIEILSNRLGLWYEFAPLIPSLLQEGFTPPTIEEATGISGVEQNRL 132

Query: 494  IVAAQVRDSLVQSNVSPELLSSFDNGGAELLYEIRLLSTSQRASAARFIVENKLDGKGAQ 673
            +VAAQVRDSLVQS   P++L+ FD GG+ELLYEIRLLS  QRA+AAR+I+ENKLD KG Q
Sbjct: 133  VVAAQVRDSLVQSKTDPQILAEFDTGGSELLYEIRLLSVQQRAAAARYIIENKLDAKGTQ 192

Query: 674  ELARAIKDFPSRRGEKGWESFDYTLPGDCFAFLYYRQGREHKNPSDERTSSLEEALRVAE 853
            +LAR++KDFP RRGEKGWESFDY  PGDC  F+YYRQ REHKNPS+ RT++LE+AL+VA 
Sbjct: 193  DLARSMKDFPRRRGEKGWESFDYAHPGDCLGFMYYRQAREHKNPSEPRTAALEQALKVAG 252

Query: 854  TDKARKTILEELKGSDVAVE--EEAIITKVVVPVVRLKIGEVAEASTVVVLPVCKAQEGE 1027
            TDKA+K IL + +G     E  E  +I  V VPVVRLK GEVAE+S VV+LPVC+A+E +
Sbjct: 253  TDKAKKIILTDFEGETDEKEGREWDVIDAVRVPVVRLKFGEVAESSKVVILPVCRAEEKD 312

Query: 1028 KSILEAPFEVRSEGGFGVVVAEKGWDRWVALPGWEPXXXXXXXXXXXSFGDARTLPWKVN 1207
            K +LEAP+E  SEG FGVVVAEKGW RWV LPGWEP           SF DAR LPWKVN
Sbjct: 313  KEVLEAPWECSSEGEFGVVVAEKGWKRWVVLPGWEPVVGLGKGAVVVSFSDARVLPWKVN 372

Query: 1208 RWYKEEPILVVTDRSKREVDADDGFYLVKVDEGDL--KVERGSALKQIGVNECLGNVVLV 1381
            +WYKEEPILVV DRSK+EV ADDGFYL  V+ G L  KV RGSALK+ GV E LG VV++
Sbjct: 373  KWYKEEPILVVADRSKKEVAADDGFYLAAVEGGGLGFKVVRGSALKETGVKESLGTVVMI 432

Query: 1382 VRPPRVEDDGQLSDEDWD 1435
            VRPPR + D QLS+EDW+
Sbjct: 433  VRPPRDDTDDQLSEEDWE 450


>ref|XP_011038528.1| PREDICTED: rubisco accumulation factor 1, chloroplastic [Populus
            euphratica]
          Length = 451

 Score =  513 bits (1321), Expect = e-175
 Identities = 251/377 (66%), Positives = 304/377 (80%), Gaps = 3/377 (0%)
 Frame = +2

Query: 314  APLPSQYRNLDIPGRIDILSNRLGIWYEYAPLISSLIREGFTPSNIEESTGISGVEQNRF 493
            +P+PSQY++LD P R++IL+NRLG+WYEYAPLI SL +EGFTP +IEE+TGISGVEQNR 
Sbjct: 75   SPIPSQYKSLDAPSRLEILANRLGLWYEYAPLIPSLFQEGFTPPSIEEATGISGVEQNRL 134

Query: 494  IVAAQVRDSLVQSNVSPELLSSFDNGGAELLYEIRLLSTSQRASAARFIVENKLDGKGAQ 673
            +V AQVRDSLVQSN  PE+++SFD GGAELLYEIRLLS +QR++AAR+IV NK+D KGAQ
Sbjct: 135  VVGAQVRDSLVQSNTDPEIVASFDLGGAELLYEIRLLSATQRSAAARYIVLNKMDAKGAQ 194

Query: 674  ELARAIKDFPSRRGEKGWESFDYTLPGDCFAFLYYRQGREHKNPSDERTSSLEEALRVAE 853
            +LARA+KDFP RRG+K WESF+Y LPGDC +F+YYRQ REHKNPS+ RT++L+ AL VAE
Sbjct: 195  DLARAMKDFPRRRGDKYWESFEYVLPGDCLSFMYYRQSREHKNPSESRTNALQMALEVAE 254

Query: 854  TDKARKTILEELKGSDVAVEEEA-IITKVVVPVVRLKIGEVAEASTVVVLPVCKAQEGEK 1030
            ++KA+  IL+EL+G +     E      V VPVVRLKIGEVAEAS+VVVLPVC++++GE+
Sbjct: 255  SEKAKSAILKELEGGERKERAEGETADGVRVPVVRLKIGEVAEASSVVVLPVCRSEDGER 314

Query: 1031 SILEAPFEVRSEGGFGVVVAEKGWDRWVALPGWEPXXXXXXXXXXXSFGDARTLPWKVNR 1210
             I+EAP+E + +G FGVVVAEK W+RWV LPGWEP           +F DAR LPWK NR
Sbjct: 315  KIVEAPWECKGQGEFGVVVAEKAWERWVVLPGWEPVLGLGRGGVAVAFPDARILPWKANR 374

Query: 1211 WYKEEPILVVTDRSKREVDADDGFYLVKVD--EGDLKVERGSALKQIGVNECLGNVVLVV 1384
            WYKEE ILVV DR  +EV ADDGFYLV +D   GD KVERGSALK+  V ECLG V+LVV
Sbjct: 375  WYKEESILVVADRGSKEVKADDGFYLVTLDGAGGDFKVERGSALKERNVVECLGTVLLVV 434

Query: 1385 RPPRVEDDGQLSDEDWD 1435
            RPPR E D QLSDEDW+
Sbjct: 435  RPPRYETDDQLSDEDWE 451