BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00002133
         (854 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU15285.1| hypothetical protein TSUD_03520 [Trifolium subte...   172   2e-47
gb|PNY10805.1| histone deacetylase, partial [Trifolium pratense]      176   8e-47
gb|PNY10806.1| histone deacetylase [Trifolium pratense]               176   3e-46
gb|PNY05793.1| histone deacetylase [Trifolium pratense]               162   2e-41
gb|PNX79340.1| retrovirus-related Pol polyprotein from transposo...   155   8e-40
gb|KYP36809.1| hypothetical protein KK1_042047 [Cajanus cajan]        147   3e-39
gb|PNX93770.1| histone deacetylase [Trifolium pratense]               156   4e-39
gb|PNX90864.1| retrovirus-related Pol polyprotein from transposo...   150   7e-39
gb|PNX93094.1| histone deacetylase, partial [Trifolium pratense]      154   2e-38
dbj|GAU29238.1| hypothetical protein TSUD_362280 [Trifolium subt...   153   3e-38
gb|PNX84343.1| retrovirus-related Pol polyprotein from transposo...   150   4e-38
gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposo...   153   4e-38
gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposo...   153   4e-38
gb|PNX81124.1| histone deacetylase, partial [Trifolium pratense]      150   2e-37
gb|PNX94499.1| retrovirus-related Pol polyprotein from transposo...   150   5e-37
gb|PNX82441.1| retrovirus-related Pol polyprotein from transposo...   147   6e-37
gb|PNX92752.1| histone deacetylase [Trifolium pratense]               149   7e-37
dbj|GAU30708.1| hypothetical protein TSUD_39320 [Trifolium subte...   149   9e-37
gb|PNX99033.1| retrovirus-related Pol polyprotein from transposo...   148   2e-36
dbj|GAU19342.1| hypothetical protein TSUD_336290 [Trifolium subt...   148   2e-36

>dbj|GAU15285.1| hypothetical protein TSUD_03520 [Trifolium subterraneum]
          Length = 392

 Score =  172 bits (436), Expect = 2e-47
 Identities = 102/265 (38%), Positives = 139/265 (52%), Gaps = 6/265 (2%)
 Frame = -2

Query: 853 KAKARQLRTELKFLKKGSKSISEFLTKIHTIADSLIAIGEDVKDRDLMDVILEGLPEEYN 674
           KAK RQLR+ELK +KKG+KSI+EF+ ++  IAD+LI+IG+ + ++D +D ILEGLPEEYN
Sbjct: 128 KAKVRQLRSELKNVKKGTKSITEFVLRVRVIADTLISIGDSISEQDQIDSILEGLPEEYN 187

Query: 673 AFVMLYYGKPDTADITEFESLLLVQEAQLEKFRQELTTTTPTANVVQA-NPQPNSQVLAT 497
            FVM+ YG+ D+  + + E LLLVQE+QLEKFRQEL+T + +AN+  +   + NS     
Sbjct: 188 PFVMMIYGRSDSPSLYDIEGLLLVQESQLEKFRQELSTPSASANLAHSRGGRGNSGARGR 247

Query: 496 NTASNGYNNPFPSFTXXXXXXXXXXXXXXXXGASHTYHHPNYTAPTNGSKPTCQLCGKFG 317
             ++ G   P                                 A   G++PTCQLCGK+G
Sbjct: 248 GRSTRGRGRP--------------------------------AASPTGNRPTCQLCGKYG 275

Query: 316 HAVTSCWYKFDESFXXXXXXXXXXXXXXXXXXXXXXXXXXXQACFAALTSH-VPGAVTAE 140
           H V  CWY+FDE+F                                  T+H  P A TA 
Sbjct: 276 HHVIDCWYRFDENFVPAPNSSVLKSDTS-----------------GPKTNHESPQACTAN 318

Query: 139 FPPEFTE----SGWYADTCASHHMT 77
           F P   E      W+ D+ ASHH+T
Sbjct: 319 FAPATQELVIPQSWFPDSGASHHIT 343


>gb|PNY10805.1| histone deacetylase, partial [Trifolium pratense]
          Length = 720

 Score =  176 bits (447), Expect = 8e-47
 Identities = 105/285 (36%), Positives = 142/285 (49%), Gaps = 1/285 (0%)
 Frame = -2

Query: 853 KAKARQLRTELKFLKKGSKSISEFLTKIHTIADSLIAIGEDVKDRDLMDVILEGLPEEYN 674
           KAK RQLR+ELK +KKG+KSISEF+ ++  IAD+LI+IG+ + ++D +D ILEGLPEEYN
Sbjct: 129 KAKVRQLRSELKTVKKGTKSISEFVLRVRAIADTLISIGDSISEQDQIDSILEGLPEEYN 188

Query: 673 AFVMLYYGKPDTADITEFESLLLVQEAQLEKFRQELTTTTPTANVVQAN-PQPNSQVLAT 497
            FVM+ YG+ D+  + + E LLLVQE+QL KFRQEL+    +ANV  +N  + NS     
Sbjct: 189 PFVMMIYGRSDSPSLFDIEGLLLVQESQLAKFRQELSLPAASANVAHSNGGRGNSGARGR 248

Query: 496 NTASNGYNNPFPSFTXXXXXXXXXXXXXXXXGASHTYHHPNYTAPTNGSKPTCQLCGKFG 317
             ++ G      S T                                G++PTCQLC K+G
Sbjct: 249 GRSARGRGRASSSST--------------------------------GTRPTCQLCNKYG 276

Query: 316 HAVTSCWYKFDESFXXXXXXXXXXXXXXXXXXXXXXXXXXXQACFAALTSHVPGAVTAEF 137
           H V  CWY++DE+F                            A FAA T  +        
Sbjct: 277 HHVRDCWYRYDENFVPVQANPVPQPPPPPPRDTQAPAPQACTANFAASTQEL-------- 328

Query: 136 PPEFTESGWYADTCASHHMTPLFHHLHSSSPYTGKYQAKMGNGYG 2
                   W+ D+ ASHH+T    +L     Y G  +  MGNG G
Sbjct: 329 ---VIPQSWFPDSGASHHITADASNLAQGKVYHGSNKVHMGNGIG 370


>gb|PNY10806.1| histone deacetylase [Trifolium pratense]
          Length = 1441

 Score =  176 bits (447), Expect = 3e-46
 Identities = 105/285 (36%), Positives = 142/285 (49%), Gaps = 1/285 (0%)
 Frame = -2

Query: 853 KAKARQLRTELKFLKKGSKSISEFLTKIHTIADSLIAIGEDVKDRDLMDVILEGLPEEYN 674
           KAK RQLR+ELK +KKG+KSISEF+ ++  IAD+LI+IG+ + ++D +D ILEGLPEEYN
Sbjct: 129 KAKVRQLRSELKTVKKGTKSISEFVLRVRAIADTLISIGDSISEQDQIDSILEGLPEEYN 188

Query: 673 AFVMLYYGKPDTADITEFESLLLVQEAQLEKFRQELTTTTPTANVVQAN-PQPNSQVLAT 497
            FVM+ YG+ D+  + + E LLLVQE+QL KFRQEL+    +ANV  +N  + NS     
Sbjct: 189 PFVMMIYGRSDSPSLFDIEGLLLVQESQLAKFRQELSLPAASANVAHSNGGRGNSGARGR 248

Query: 496 NTASNGYNNPFPSFTXXXXXXXXXXXXXXXXGASHTYHHPNYTAPTNGSKPTCQLCGKFG 317
             ++ G      S T                                G++PTCQLC K+G
Sbjct: 249 GRSARGRGRASSSST--------------------------------GTRPTCQLCNKYG 276

Query: 316 HAVTSCWYKFDESFXXXXXXXXXXXXXXXXXXXXXXXXXXXQACFAALTSHVPGAVTAEF 137
           H V  CWY++DE+F                            A FAA T  +        
Sbjct: 277 HHVRDCWYRYDENFVPVQANPVPQPPPPPPRDTQAPAPQACTANFAASTQEL-------- 328

Query: 136 PPEFTESGWYADTCASHHMTPLFHHLHSSSPYTGKYQAKMGNGYG 2
                   W+ D+ ASHH+T    +L     Y G  +  MGNG G
Sbjct: 329 ---VIPQSWFPDSGASHHITADASNLAQGKVYHGSNKVHMGNGIG 370


>gb|PNY05793.1| histone deacetylase [Trifolium pratense]
          Length = 1485

 Score =  162 bits (411), Expect = 2e-41
 Identities = 103/291 (35%), Positives = 149/291 (51%), Gaps = 7/291 (2%)
 Frame = -2

Query: 853 KAKARQLRTELKFLKKGSKSISEFLTKIHTIADSLIAIGEDVKDRDLMDVILEGLPEEYN 674
           KA+ARQLR+ELK  KK ++SI E+L +I TI DSL AIG+ V D++ +D ILEGLPEE+N
Sbjct: 150 KARARQLRSELKNTKKLARSIGEYLLRIKTIIDSLTAIGDTVSDQEHIDAILEGLPEEFN 209

Query: 673 AFVMLYYGKPDTADITEFESLLLVQEAQLEKFRQELTTTTPTANVVQANPQPNSQVLATN 494
           +FVM+ Y + DT  + + E+LL+VQEAQ EKFRQEL +   +AN+ Q+  + +++ +   
Sbjct: 210 SFVMMIYSRLDTPTVEDVEALLMVQEAQFEKFRQELASPNVSANLAQSEAKTSAESVNHE 269

Query: 493 TASNGYNNPFPSFTXXXXXXXXXXXXXXXXGASHTYHHPNYTAPTNGSKPTCQLCGKFGH 314
               G  +    +                 G S    H         S  TCQ+CGK GH
Sbjct: 270 NTEVGTEH----YAAGGKGRGRGRGRGRGRGRSSKNPH---------SDSTCQICGKNGH 316

Query: 313 AVTSCWYKFDES-------FXXXXXXXXXXXXXXXXXXXXXXXXXXXQACFAALTSHVPG 155
             + CWY++D +       F                              + A++ +  G
Sbjct: 317 EASGCWYRYDPNPTPKQFKFPGFASSSNPSMRPPSYNPYMRPNANLAFNPYYAMSEY--G 374

Query: 154 AVTAEFPPEFTESGWYADTCASHHMTPLFHHLHSSSPYTGKYQAKMGNGYG 2
           A     P  ++E+ WY D+ A+HH+T    +L   SPYTG+ Q  MGNG G
Sbjct: 375 A-----PSVYSEAPWYPDSGATHHLTFNQQNLAQRSPYTGQEQVLMGNGQG 420


>gb|PNX79340.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 589

 Score =  155 bits (393), Expect = 8e-40
 Identities = 94/289 (32%), Positives = 143/289 (49%), Gaps = 5/289 (1%)
 Frame = -2

Query: 853 KAKARQLRTELKFLKKGSKSISEFLTKIHTIADSLIAIGEDVKDRDLMDVILEGLPEEYN 674
           K++ARQLR+ELK  KK ++S++E+L ++ +I +SLIA+G++V +++ +D ILEGLPEEYN
Sbjct: 135 KSRARQLRSELKNTKKHARSVNEYLLRVKSIVNSLIAVGDNVSEQEQVDAILEGLPEEYN 194

Query: 673 AFVMLYYGKPDTADITEFESLLLVQEAQLEKFRQELTTTTPTANVVQANPQPNSQVLATN 494
           +FVM+ Y + +T  + + E+LLL+QE Q EKFRQEL   + +ANV       N  ++ T 
Sbjct: 195 SFVMMIYSRFETPTVEDVEALLLLQEVQFEKFRQELANPSVSANVAHTETHSNDPIVDTT 254

Query: 493 TASNGYNNPFPSFTXXXXXXXXXXXXXXXXGASHTYHHPNYTAPTNGSKPTCQLCGKFGH 314
           T  +G  +   +                    S            N  K  CQ+C +  H
Sbjct: 255 TQESGTEHYNVTANRGKGRGKGRGRGRGRTQNSQ-----------NTGKVQCQICDRPNH 303

Query: 313 AVTSCWYKFDESFXXXXXXXXXXXXXXXXXXXXXXXXXXXQACFAALTSHVPGAVTAEFP 134
             + CWY++D S                               +A  T+H+  A+   F 
Sbjct: 304 DASICWYRYDPSNAKPQARGYNPSSNPRTPHFNP---------YARPTAHL--AIPQYFT 352

Query: 133 P-----EFTESGWYADTCASHHMTPLFHHLHSSSPYTGKYQAKMGNGYG 2
           P       + + WY D+ ASHH+T   H+    +PY G  Q  MGNG G
Sbjct: 353 PTTEFDSMSSASWYPDSGASHHLTYNPHNFGYRAPYQGHDQVMMGNGQG 401


>gb|KYP36809.1| hypothetical protein KK1_042047 [Cajanus cajan]
          Length = 280

 Score =  147 bits (372), Expect = 3e-39
 Identities = 85/197 (43%), Positives = 115/197 (58%), Gaps = 5/197 (2%)
 Frame = -2

Query: 850 AKARQLRTELKFLKKG-SKSISEFLTKIHTIADSLIAIGEDVKDRDLMDVILEGLPEEYN 674
           AK RQLR+ELK  KKG S+ ISE++ +I  I +SLI +G+ V D+D +D IL+GLPE+YN
Sbjct: 41  AKKRQLRSELKSSKKGPSQPISEYILRIREIINSLIVVGDLVTDQDQIDTILDGLPEDYN 100

Query: 673 AFVMLYYGKPDTADITEFESLLLVQEAQLEKFRQELTTTTPTANVVQANPQPNSQVLATN 494
           +F+M+ YG+ D+  +T+ ESLLLVQEAQLEK+RQ+LT+ + + NVVQ  PQ +     + 
Sbjct: 101 SFIMMIYGRSDSISVTDVESLLLVQEAQLEKYRQDLTSPSVSVNVVQ-GPQDSQFQSQSQ 159

Query: 493 TASNGYNNPFPSFTXXXXXXXXXXXXXXXXGASHTYHHPNYTA----PTNGSKPTCQLCG 326
             SN     F   T                     Y    Y         G +PTCQLC 
Sbjct: 160 FVSN--RGGFQFSTRGGRYRGGRYRCRGRNRCGGRYRGGRYRGRGRNRGGGQRPTCQLCY 217

Query: 325 KFGHAVTSCWYKFDESF 275
           K+GH    CW +FDE+F
Sbjct: 218 KYGHDAFHCWNRFDEAF 234


>gb|PNX93770.1| histone deacetylase [Trifolium pratense]
          Length = 1453

 Score =  156 bits (394), Expect = 4e-39
 Identities = 98/284 (34%), Positives = 137/284 (48%)
 Frame = -2

Query: 853 KAKARQLRTELKFLKKGSKSISEFLTKIHTIADSLIAIGEDVKDRDLMDVILEGLPEEYN 674
           K++ARQLR+ELK  KK ++S+SE+L +I +I +SLIA+G+ V +++ +D ILEGLPEE+N
Sbjct: 138 KSRARQLRSELKNTKKLARSVSEYLLRIKSIVNSLIAMGDVVTEQEQVDAILEGLPEEFN 197

Query: 673 AFVMLYYGKPDTADITEFESLLLVQEAQLEKFRQELTTTTPTANVVQANPQPNSQVLATN 494
           +FVM+ Y K +   + E E+LLL+QEAQ EKFRQEL   + +ANV Q   Q NS  L   
Sbjct: 198 SFVMMVYSKSENPTVEEIEALLLLQEAQFEKFRQELANPSVSANVAQVETQSNSPNLDLE 257

Query: 493 TASNGYNNPFPSFTXXXXXXXXXXXXXXXXGASHTYHHPNYTAPTNGSKPTCQLCGKFGH 314
              +G  +                                  AP NG K  CQ+C K  H
Sbjct: 258 GQESGTEH----------YNVNAYRGRGRGKGRGRGKGKAQIAPNNG-KVQCQICSKPNH 306

Query: 313 AVTSCWYKFDESFXXXXXXXXXXXXXXXXXXXXXXXXXXXQACFAALTSHVPGAVTAEFP 134
             T CWY+++                                      S +P   T    
Sbjct: 307 EATDCWYRYEPPSARPNNRGHNNRPPTRPPHFNPYPRPTAHLAIPQYYSSIPDMDT---- 362

Query: 133 PEFTESGWYADTCASHHMTPLFHHLHSSSPYTGKYQAKMGNGYG 2
              + + WY D+ ASHH+T   ++L   +PY G  Q  MGNG G
Sbjct: 363 --LSSASWYPDSGASHHLTYNPNNLGYRTPYQGHDQVMMGNGQG 404


>gb|PNX90864.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 401

 Score =  150 bits (378), Expect = 7e-39
 Identities = 93/282 (32%), Positives = 140/282 (49%)
 Frame = -2

Query: 853 KAKARQLRTELKFLKKGSKSISEFLTKIHTIADSLIAIGEDVKDRDLMDVILEGLPEEYN 674
           KA+ARQLR+ELK  KK ++S++E+L +I +I +SLIA+G+ V  ++ +D +LEGLPEEYN
Sbjct: 137 KARARQLRSELKNTKKLTRSVNEYLLRIKSIVNSLIAVGDVVSVQEQVDAVLEGLPEEYN 196

Query: 673 AFVMLYYGKPDTADITEFESLLLVQEAQLEKFRQELTTTTPTANVVQANPQPNSQVLATN 494
           +FVML Y + +T  + + E+LLL+QE Q EKFRQELT  + +ANV   N + NS      
Sbjct: 197 SFVMLVYSRFETPTVEDVEALLLLQEVQFEKFRQELTNPSVSANVAHMNSKSNSPNQEGE 256

Query: 493 TASNGYNNPFPSFTXXXXXXXXXXXXXXXXGASHTYHHPNYTAPTNGSKPTCQLCGKFGH 314
           +  +G  + + +                              APT+G K  CQ+CGK  H
Sbjct: 257 SQESGTEHYYANANRGRGRGKGRGRGRGKA----------QIAPTSG-KVQCQICGKSNH 305

Query: 313 AVTSCWYKFDESFXXXXXXXXXXXXXXXXXXXXXXXXXXXQACFAALTSHVPGAVTAEFP 134
              +CW+++                                       + +P   TA   
Sbjct: 306 DAANCWHRYAPPSSRTNARGYNAGNSSRPLHYNPYPRPTAHLAIPQYYTSIPDMDTA--- 362

Query: 133 PEFTESGWYADTCASHHMTPLFHHLHSSSPYTGKYQAKMGNG 8
              + + WY D+ ASHH+T   +++    PY G+ Q  MGNG
Sbjct: 363 ---STASWYPDSGASHHLTFNPNNMAYHVPYHGQDQVMMGNG 401


>gb|PNX93094.1| histone deacetylase, partial [Trifolium pratense]
          Length = 1513

 Score =  154 bits (389), Expect = 2e-38
 Identities = 97/284 (34%), Positives = 141/284 (49%)
 Frame = -2

Query: 853 KAKARQLRTELKFLKKGSKSISEFLTKIHTIADSLIAIGEDVKDRDLMDVILEGLPEEYN 674
           K++ARQLR+ELK  KK S+S++E++ +I TI +SLIA+G+ V +R+ +D ILEGLPEE+N
Sbjct: 162 KSRARQLRSELKNTKKLSRSVNEYILRIKTIVNSLIAVGDIVSEREQVDAILEGLPEEFN 221

Query: 673 AFVMLYYGKPDTADITEFESLLLVQEAQLEKFRQELTTTTPTANVVQANPQPNSQVLATN 494
            FVM+ Y + +T  + E E+LLL+QEAQ EKFRQEL   + +AN+ Q + + NS    +N
Sbjct: 222 PFVMMVYSRFETPVVEEVEALLLLQEAQFEKFRQELANPSVSANIAQMDTKSNSS--NSN 279

Query: 493 TASNGYNNPFPSFTXXXXXXXXXXXXXXXXGASHTYHHPNYTAPTNGSKPTCQLCGKFGH 314
           + SN +     + T                 A         +AP  G K  CQ+C K  H
Sbjct: 280 SDSNDFGTEHYNVTATRGRGRGKGRGRGRGRAP--------SAPNTG-KVQCQICSKSNH 330

Query: 313 AVTSCWYKFDESFXXXXXXXXXXXXXXXXXXXXXXXXXXXQACFAALTSHVPGAVTAEFP 134
              +CW+++D                                         P   TA   
Sbjct: 331 DALNCWHRYDPPSARPNTRGYNAGNTARQPHFNPYHRPSAHLAIPQYYPSYPDMDTA--- 387

Query: 133 PEFTESGWYADTCASHHMTPLFHHLHSSSPYTGKYQAKMGNGYG 2
              + + WY D+ ASHH+T    ++    PY G+ Q  MGNG G
Sbjct: 388 ---STASWYPDSGASHHLTFNPSNMAYRIPYQGQDQVMMGNGQG 428


>dbj|GAU29238.1| hypothetical protein TSUD_362280 [Trifolium subterraneum]
          Length = 1433

 Score =  153 bits (387), Expect = 3e-38
 Identities = 98/287 (34%), Positives = 144/287 (50%), Gaps = 3/287 (1%)
 Frame = -2

Query: 853 KAKARQLRTELKFLKKGSKSISEFLTKIHTIADSLIAIGEDVKDRDLMDVILEGLPEEYN 674
           K++ RQLR+ELK  KK ++ +SE+L +I +I +SLIA+GE V +++ +D ILEGLPE++N
Sbjct: 138 KSRIRQLRSELKNTKKLARPVSEYLLRIKSIVNSLIAMGETVTEQEQIDAILEGLPEDFN 197

Query: 673 AFVMLYYGKPDTADITEFESLLLVQEAQLEKFRQELTTTTPTANVVQA---NPQPNSQVL 503
           +FVM+ Y + DT  + + E LL++QEAQ EKFRQELT  + +AN+ Q    N Q NS+  
Sbjct: 198 SFVMMMYSRFDTPTVEDIEGLLMLQEAQFEKFRQELTNPSVSANIAQIGSKNHQSNSEAE 257

Query: 502 ATNTASNGYNNPFPSFTXXXXXXXXXXXXXXXXGASHTYHHPNYTAPTNGSKPTCQLCGK 323
            T + +  YN+                       A      PN  AP  G K  CQ+CGK
Sbjct: 258 DTESGNESYNS-----------NSYRGRGRGKGRARGRGRAPN--APNTG-KVQCQICGK 303

Query: 322 FGHAVTSCWYKFDESFXXXXXXXXXXXXXXXXXXXXXXXXXXXQACFAALTSHVPGAVTA 143
             H    CWY+++                               +   AL  +       
Sbjct: 304 ANHDAAICWYRYE---PPSSRSNACGHNAGSSSRPPPYNPYPRPSAHLALPQYYNPIADM 360

Query: 142 EFPPEFTESGWYADTCASHHMTPLFHHLHSSSPYTGKYQAKMGNGYG 2
           +     + + WY D+ ASHH+T   ++L   +PY G+ Q  MGNG G
Sbjct: 361 D---SVSNASWYPDSGASHHLTFNPNNLTYRTPYQGQDQVTMGNGQG 404


>gb|PNX84343.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 560

 Score =  150 bits (380), Expect = 4e-38
 Identities = 93/284 (32%), Positives = 139/284 (48%)
 Frame = -2

Query: 853 KAKARQLRTELKFLKKGSKSISEFLTKIHTIADSLIAIGEDVKDRDLMDVILEGLPEEYN 674
           K++ARQLR+ELK  KK  KS++E+L +I +I +SLIA+G+ V  ++ +D ILEGLPE++N
Sbjct: 135 KSRARQLRSELKNTKKHGKSVNEYLLRIKSIVNSLIAVGDTVSVQEQVDAILEGLPEDFN 194

Query: 673 AFVMLYYGKPDTADITEFESLLLVQEAQLEKFRQELTTTTPTANVVQANPQPNSQVLATN 494
           +FVM+ Y + +T  + + E+LLL+QE Q EKFRQEL   + +ANV       N  V+ T 
Sbjct: 195 SFVMMIYSRFETPTVEDVEALLLLQEVQFEKFRQELANPSVSANVAHTEVNSNEPVMDTT 254

Query: 493 TASNGYNNPFPSFTXXXXXXXXXXXXXXXXGASHTYHHPNYTAPTNGSKPTCQLCGKFGH 314
              +G  +   +                    SH           N  K  CQ+C +  H
Sbjct: 255 AQESGTQHYNATANRGRGRGKGKGRGRGRAQNSH-----------NNGKVQCQICDRPNH 303

Query: 313 AVTSCWYKFDESFXXXXXXXXXXXXXXXXXXXXXXXXXXXQACFAALTSHVPGAVTAEFP 134
             T CWY++D S                             +   A+  +   A +A+F 
Sbjct: 304 DATICWYRYDSS---NSKPQARGYNASSNPRPAHFNPYARPSAHLAIPQYY--APSADF- 357

Query: 133 PEFTESGWYADTCASHHMTPLFHHLHSSSPYTGKYQAKMGNGYG 2
              + + WY D+ ASHH+T   ++    +PY G  Q  MGNG G
Sbjct: 358 DSMSSASWYPDSGASHHLTYNPNNFGYRAPYQGHDQVMMGNGTG 401


>gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 1417

 Score =  153 bits (386), Expect = 4e-38
 Identities = 98/286 (34%), Positives = 144/286 (50%), Gaps = 2/286 (0%)
 Frame = -2

Query: 853 KAKARQLRTELKFLKKGSKSISEFLTKIHTIADSLIAIGEDVKDRDLMDVILEGLPEEYN 674
           K++ARQLR+ELK  KK S+S++E+L +I +I +SL+A+G+ V +++ +D ILEGLPEE+N
Sbjct: 102 KSRARQLRSELKNTKKLSRSVNEYLLRIKSIVNSLVAVGDMVSEQEQVDSILEGLPEEFN 161

Query: 673 AFVMLYYGKPDTADITEFESLLLVQEAQLEKFRQELTTTTPTANVVQANPQPNSQVLATN 494
           +FVM+ Y + DT  + + E+LLL+QEAQ EKF+QELT+ + +ANV             T 
Sbjct: 162 SFVMMVYSRFDTPTVEDVEALLLLQEAQFEKFKQELTSPSVSANVAH-----------TE 210

Query: 493 TASNGYNNPFPSFTXXXXXXXXXXXXXXXXGASHTYHHPNYTAPTNGSKPTCQLCGKFGH 314
           T ++  N+   S                  G           A   G K  CQ+C K  H
Sbjct: 211 TNASDSNSEHESQELGTEHYNVNANRGRGRGKGRGRGRGKGQAQNQG-KVKCQICAKPNH 269

Query: 313 AVTSCWYKFDESFXXXXXXXXXXXXXXXXXXXXXXXXXXXQACFAALTSH--VPGAVTAE 140
              +CWY++D                                 +   T+H  +P      
Sbjct: 270 DAINCWYRYDPQAMNQNSRGGYQVGPSNRPQNFNP--------YMRPTAHLAMPQPYAMP 321

Query: 139 FPPEFTESGWYADTCASHHMTPLFHHLHSSSPYTGKYQAKMGNGYG 2
              +F+   WY D+ ASHH+T   ++L  SSPYTG+ Q  MGNG G
Sbjct: 322 NMDQFSNGAWYPDSGASHHLTYNPNNLSYSSPYTGQDQVVMGNGQG 367


>gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 1417

 Score =  153 bits (386), Expect = 4e-38
 Identities = 98/286 (34%), Positives = 144/286 (50%), Gaps = 2/286 (0%)
 Frame = -2

Query: 853 KAKARQLRTELKFLKKGSKSISEFLTKIHTIADSLIAIGEDVKDRDLMDVILEGLPEEYN 674
           K++ARQLR+ELK  KK S+S++E+L +I +I +SL+A+G+ V +++ +D ILEGLPEE+N
Sbjct: 102 KSRARQLRSELKNTKKLSRSVNEYLLRIKSIVNSLVAVGDMVSEQEQVDSILEGLPEEFN 161

Query: 673 AFVMLYYGKPDTADITEFESLLLVQEAQLEKFRQELTTTTPTANVVQANPQPNSQVLATN 494
           +FVM+ Y + DT  + + E+LLL+QEAQ EKF+QELT+ + +ANV             T 
Sbjct: 162 SFVMMVYSRFDTPTVEDVEALLLLQEAQFEKFKQELTSPSVSANVAH-----------TE 210

Query: 493 TASNGYNNPFPSFTXXXXXXXXXXXXXXXXGASHTYHHPNYTAPTNGSKPTCQLCGKFGH 314
           T ++  N+   S                  G           A   G K  CQ+C K  H
Sbjct: 211 TNASDSNSEHESQELGTEHYNVNANRGRGRGKGRGRGRGKGQAQNQG-KVKCQICAKPNH 269

Query: 313 AVTSCWYKFDESFXXXXXXXXXXXXXXXXXXXXXXXXXXXQACFAALTSH--VPGAVTAE 140
              +CWY++D                                 +   T+H  +P      
Sbjct: 270 DAINCWYRYDPQAMNQNSRGGYQVGPSNRPQNFNP--------YMRPTAHLAMPQPYAMP 321

Query: 139 FPPEFTESGWYADTCASHHMTPLFHHLHSSSPYTGKYQAKMGNGYG 2
              +F+   WY D+ ASHH+T   ++L  SSPYTG+ Q  MGNG G
Sbjct: 322 NMDQFSNGAWYPDSGASHHLTYNPNNLSYSSPYTGQDQVVMGNGQG 367


>gb|PNX81124.1| histone deacetylase, partial [Trifolium pratense]
          Length = 660

 Score =  150 bits (378), Expect = 2e-37
 Identities = 97/286 (33%), Positives = 143/286 (50%), Gaps = 2/286 (0%)
 Frame = -2

Query: 853 KAKARQLRTELKFLKKGSKSISEFLTKIHTIADSLIAIGEDVKDRDLMDVILEGLPEEYN 674
           K++ARQLR+ELK  KK S++++E+L +I +I +SLIAIG+ V +R+ +D ILEGL EE+N
Sbjct: 136 KSRARQLRSELKNTKKHSRTVNEYLLRIKSIVNSLIAIGDVVSEREQVDAILEGLSEEFN 195

Query: 673 AFVMLYYGKPDTADITEFESLLLVQEAQLEKFRQELTTTTPTANV--VQANPQPNSQVLA 500
            FVM+ Y + DT  + + E+LLL+QE+QLEKFRQEL   + +ANV  +++    NS    
Sbjct: 196 PFVMMVYSRTDTPSVEDVEALLLLQESQLEKFRQELANPSVSANVAQIESKNSNNSDSEG 255

Query: 499 TNTASNGYNNPFPSFTXXXXXXXXXXXXXXXXGASHTYHHPNYTAPTNGSKPTCQLCGKF 320
             +A+  YN  F +                   AS+T             K  CQ+C K+
Sbjct: 256 QESATEHYN--FNAQRGRGRNKGRGRGRGKAQVASNT------------GKVQCQICSKY 301

Query: 319 GHAVTSCWYKFDESFXXXXXXXXXXXXXXXXXXXXXXXXXXXQACFAALTSHVPGAVTAE 140
            H  + CW+++D S                                    + +P      
Sbjct: 302 NHDASICWHRYDPSSSRPTGRGYNAGNNPRPXXYNPYPRPSAHLALPQYYNPIPDM---- 357

Query: 139 FPPEFTESGWYADTCASHHMTPLFHHLHSSSPYTGKYQAKMGNGYG 2
                + + WY D+ ASHH+T   ++L    PY G  Q  MGNG G
Sbjct: 358 --DSVSAASWYPDSGASHHLTFNPNNLAYRVPYQGHDQVTMGNGQG 401


>gb|PNX94499.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 1434

 Score =  150 bits (378), Expect = 5e-37
 Identities = 92/284 (32%), Positives = 137/284 (48%)
 Frame = -2

Query: 853 KAKARQLRTELKFLKKGSKSISEFLTKIHTIADSLIAIGEDVKDRDLMDVILEGLPEEYN 674
           KA+ARQLR+ELK  KK ++S++E+L +I +I +SLIA+G+ V  ++  D ILEGLPEE+N
Sbjct: 139 KARARQLRSELKNTKKLARSVNEYLLRIKSIVNSLIAVGDVVTVQEQADAILEGLPEEFN 198

Query: 673 AFVMLYYGKPDTADITEFESLLLVQEAQLEKFRQELTTTTPTANVVQANPQPNSQVLATN 494
           +FVM+ Y + ++  + E E+LLL+QEAQ EKFRQEL   + +ANV + +   N+  + + 
Sbjct: 199 SFVMMIYSRFESPTVEEIEALLLLQEAQFEKFRQELANPSVSANVAKVDTNSNNPSVDSE 258

Query: 493 TASNGYNNPFPSFTXXXXXXXXXXXXXXXXGASHTYHHPNYTAPTNGSKPTCQLCGKFGH 314
              +G  + + + +                            A   G K  CQ+CGK  H
Sbjct: 259 DQESGTEHYYVTASRGRGRGKGRGRG-----------RGKAQAVAAGGKVQCQICGKPNH 307

Query: 313 AVTSCWYKFDESFXXXXXXXXXXXXXXXXXXXXXXXXXXXQACFAALTSHVPGAVTAEFP 134
               CWY++D                                      S +P   T    
Sbjct: 308 EAAGCWYRYDPPTAKPHARGYNAGQSSRPTHYNPYPRPTAHLAIPQYFSPIPDMET---- 363

Query: 133 PEFTESGWYADTCASHHMTPLFHHLHSSSPYTGKYQAKMGNGYG 2
              + + WY D+ ASHH+T   ++L    PY G  Q  MGNG G
Sbjct: 364 --LSTASWYPDSGASHHLTYNPNNLAYRIPYQGHDQVTMGNGQG 405


>gb|PNX82441.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 537

 Score =  147 bits (371), Expect = 6e-37
 Identities = 92/286 (32%), Positives = 136/286 (47%), Gaps = 2/286 (0%)
 Frame = -2

Query: 853 KAKARQLRTELKFLKKGSKSISEFLTKIHTIADSLIAIGEDVKDRDLMDVILEGLPEEYN 674
           K++ARQLR+ELK  KK SKS++E+L ++ +I +SLIA+G+ V +++ +D ILEGLPEE+N
Sbjct: 119 KSRARQLRSELKNTKKLSKSVNEYLLRVKSIVNSLIAVGDVVSEQEQVDAILEGLPEEFN 178

Query: 673 AFVMLYYGKPDTADITEFESLLLVQEAQLEKFRQELTTTTPTANVVQANPQPNSQVLATN 494
           +FVM+ Y + +T  +   E+LLL+QE Q EKFRQEL   + +AN+ Q     NS  L   
Sbjct: 179 SFVMMVYSRFETPTVENVEALLLLQEVQFEKFRQELANPSVSANIAQVETNSNSPKLEYE 238

Query: 493 TASNGYNNPFPSFTXXXXXXXXXXXXXXXXGASHTYHHPNYTAPTNGSKPTCQLCGKFGH 314
              +G  +                                  AP+ G K  CQ+CGK  H
Sbjct: 239 DQESGTEH----------YNVNTNRGRGRGKGRGRXRGKTQNAPSTG-KVQCQICGKSNH 287

Query: 313 AVTSCWYKFDESFXXXXXXXXXXXXXXXXXXXXXXXXXXXQACFAALTSH--VPGAVTAE 140
               CWY+++                                 +   T+H  +P      
Sbjct: 288 DAAICWYRYEPPXSKPKGRGHNAGNTSRPLHYNP---------YPRPTAHLAIPQFYNTP 338

Query: 139 FPPEFTESGWYADTCASHHMTPLFHHLHSSSPYTGKYQAKMGNGYG 2
                + + WY D+ ASHH+T   +++    PY G  Q  MGNG G
Sbjct: 339 DMDSVSTASWYPDSGASHHLTFNPNNIGYRMPYYGHDQVLMGNGQG 384


>gb|PNX92752.1| histone deacetylase [Trifolium pratense]
          Length = 1455

 Score =  149 bits (377), Expect = 7e-37
 Identities = 94/284 (33%), Positives = 138/284 (48%)
 Frame = -2

Query: 853 KAKARQLRTELKFLKKGSKSISEFLTKIHTIADSLIAIGEDVKDRDLMDVILEGLPEEYN 674
           K++ARQLR+ELK  KK ++S++E+L +I +I +SLIA+G+ V  ++ +D ILEGLPEE+N
Sbjct: 135 KSRARQLRSELKNTKKHARSVNEYLLRIKSIVNSLIAVGDVVSVQEQVDAILEGLPEEFN 194

Query: 673 AFVMLYYGKPDTADITEFESLLLVQEAQLEKFRQELTTTTPTANVVQANPQPNSQVLATN 494
           +FVM+ Y + +T  + + E+LLL+QE Q EKFRQEL   + +AN+       N  V+   
Sbjct: 195 SFVMMIYSRFETPTVEDVEALLLLQEVQFEKFRQELANPSVSANIAHTEVHSNEPVMEAA 254

Query: 493 TASNGYNNPFPSFTXXXXXXXXXXXXXXXXGASHTYHHPNYTAPTNGSKPTCQLCGKFGH 314
              +G  +   +                    SH           N  K  CQ+C +  H
Sbjct: 255 NQESGTEHYNATANRGRGRGKGKGRGRGRTQNSH-----------NNGKVHCQICDRPNH 303

Query: 313 AVTSCWYKFDESFXXXXXXXXXXXXXXXXXXXXXXXXXXXQACFAALTSHVPGAVTAEFP 134
             T CWY++D S                             A  A    + P   TAEF 
Sbjct: 304 DATICWYRYDSS--NAKPQARGYNTSSNPRPSHFNPYARPSAHLAIPQYYTP---TAEF- 357

Query: 133 PEFTESGWYADTCASHHMTPLFHHLHSSSPYTGKYQAKMGNGYG 2
              + + WY D+ ASHH+T   ++    +PY G  Q  MGNG G
Sbjct: 358 DSMSSASWYPDSGASHHLTYNPNNFGYRAPYQGHDQVMMGNGTG 401


>dbj|GAU30708.1| hypothetical protein TSUD_39320 [Trifolium subterraneum]
          Length = 1432

 Score =  149 bits (376), Expect = 9e-37
 Identities = 96/287 (33%), Positives = 146/287 (50%), Gaps = 3/287 (1%)
 Frame = -2

Query: 853 KAKARQLRTELKFLKKGSKSISEFLTKIHTIADSLIAIGEDVKDRDLMDVILEGLPEEYN 674
           K++ RQLR+ELK  KK ++S+SE+L +I +I +SLIA+GE + +++ +D IL+GL EE+N
Sbjct: 138 KSRIRQLRSELKNTKKLARSVSEYLLRIKSIINSLIAMGESISEQEQIDAILDGLSEEFN 197

Query: 673 AFVMLYYGKPDTADITEFESLLLVQEAQLEKFRQELTTTTPTANVVQA---NPQPNSQVL 503
           +FVM+ Y + D   + + E LL++QEAQ +KFRQELT  + +ANV Q    N  PN +V 
Sbjct: 198 SFVMMVYSRFDNPTVEDVEGLLMLQEAQFDKFRQELTNPSVSANVAQMDSKNQHPNQEVE 257

Query: 502 ATNTASNGYNNPFPSFTXXXXXXXXXXXXXXXXGASHTYHHPNYTAPTNGSKPTCQLCGK 323
            T + +  Y   F ++                  A      PN     N  K  CQ+C K
Sbjct: 258 DTESGNEHYT--FNTYRGKGRGRGK---------AKARGKAPN---ALNNGKVQCQICSK 303

Query: 322 FGHAVTSCWYKFDESFXXXXXXXXXXXXXXXXXXXXXXXXXXXQACFAALTSHVPGAVTA 143
             H   +CWY+++                               +   AL  +     TA
Sbjct: 304 SNHDAANCWYRYE---PPSSRTNGRGYNAGNTSRPPLYNPYPRPSAHLALPQYY--NPTA 358

Query: 142 EFPPEFTESGWYADTCASHHMTPLFHHLHSSSPYTGKYQAKMGNGYG 2
           EF   ++ + WY D+ ASHH+T   +++   +PY G+ Q  MGNG G
Sbjct: 359 EF-DTYSNASWYPDSGASHHLTFNPNNMAYRTPYQGQDQVTMGNGQG 404


>gb|PNX99033.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 1101

 Score =  148 bits (374), Expect = 2e-36
 Identities = 95/287 (33%), Positives = 141/287 (49%), Gaps = 3/287 (1%)
 Frame = -2

Query: 853 KAKARQLRTELKFLKKGSKSISEFLTKIHTIADSLIAIGEDVKDRDLMDVILEGLPEEYN 674
           K++ RQLR+ELK  KK ++SI+E+L +I TI +SLIA+G+ V +++ +D ILEGLPEE+N
Sbjct: 138 KSRTRQLRSELKNTKKLARSINEYLLRIKTIVNSLIAVGDSVSEQEQVDAILEGLPEEFN 197

Query: 673 AFVMLYYGKPDTADITEFESLLLVQEAQLEKFRQELTTTTPTANVVQANPQPNSQVL--- 503
           +FVM+ Y + D+  + + E+LLL+QEAQ EKF+QEL+  + +ANV  A+ Q +  V    
Sbjct: 198 SFVMMVYSRFDSPTVEDVEALLLLQEAQFEKFKQELSNPSVSANVAHADAQSSDSVNNQD 257

Query: 502 ATNTASNGYNNPFPSFTXXXXXXXXXXXXXXXXGASHTYHHPNYTAPTNGSKPTCQLCGK 323
              TAS  YN                       G     H        +  K  CQ+C K
Sbjct: 258 LPETASEHYN--------VNVHRGRGRGKGKGRGRGRNQHQ-------SQGKVECQICSK 302

Query: 322 FGHAVTSCWYKFDESFXXXXXXXXXXXXXXXXXXXXXXXXXXXQACFAALTSHVPGAVTA 143
             H   +CWY++D                               +   A+  +       
Sbjct: 303 SNHDAINCWYRYD---PPAMRNNRRGNNAGPAARPQNFNPYMRPSAHLAMPQYYAPMTDM 359

Query: 142 EFPPEFTESGWYADTCASHHMTPLFHHLHSSSPYTGKYQAKMGNGYG 2
           +     + + WY D+ ASHH+T   ++L   +PYTG  Q  MGNG G
Sbjct: 360 D---AMSSASWYPDSGASHHLTYNPNNLAYRTPYTGHEQVMMGNGQG 403


>dbj|GAU19342.1| hypothetical protein TSUD_336290 [Trifolium subterraneum]
          Length = 1442

 Score =  148 bits (373), Expect = 2e-36
 Identities = 93/284 (32%), Positives = 144/284 (50%)
 Frame = -2

Query: 853 KAKARQLRTELKFLKKGSKSISEFLTKIHTIADSLIAIGEDVKDRDLMDVILEGLPEEYN 674
           +A+ARQLR+ELK  KK S+S+ E+L +I +I +SL+A+G+ V DR+ +D ILEGLPEE+N
Sbjct: 138 QARARQLRSELKNTKKASRSVGEYLLRIKSIVNSLLAVGDLVSDREQVDAILEGLPEEFN 197

Query: 673 AFVMLYYGKPDTADITEFESLLLVQEAQLEKFRQELTTTTPTANVVQANPQPNSQVLATN 494
           +FVM+ Y + DT  + + E+LLL+QEAQ EKFRQEL + + +A+V   + + +   +  +
Sbjct: 198 SFVMMVYSRFDTPTVEDVEALLLLQEAQFEKFRQELASPSVSAHVALTDSKMSDNSVDQD 257

Query: 493 TASNGYNNPFPSFTXXXXXXXXXXXXXXXXGASHTYHHPNYTAPTNGSKPTCQLCGKFGH 314
           +   G  +                      G   +    +Y+    G++  CQ+C K  H
Sbjct: 258 SHEVGTEH---------YVAGKGRGRGKGRGKGRSRGRGSYSGGNQGTQ--CQICSKSSH 306

Query: 313 AVTSCWYKFDESFXXXXXXXXXXXXXXXXXXXXXXXXXXXQACFAALTSHVPGAVTAEFP 134
              +CWY++  S                             +   AL  +          
Sbjct: 307 DAVNCWYRYHPS---PSMMNAPRGHAVAHSRPPPYNPPMRPSAHLALPYYTGAP------ 357

Query: 133 PEFTESGWYADTCASHHMTPLFHHLHSSSPYTGKYQAKMGNGYG 2
              +E+ WY D+ ASHH+T   ++L  S+PYTG  Q  MGNG G
Sbjct: 358 ---SEASWYPDSGASHHLTYDPYNLVHSNPYTGHDQVMMGNGQG 398