BLASTX nr result

ID: Astragalus24_contig00001202 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00001202
         (1737 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KGS22900.1| hypothetical protein X962_5169 [Burkholderia pseu...    62   1e-06
gb|ABA49681.1| hypothetical protein BURPS1710b_1104 [Burkholderi...    62   2e-06

>gb|KGS22900.1| hypothetical protein X962_5169 [Burkholderia pseudomallei MSHR7343]
          Length = 341

 Score = 62.4 bits (150), Expect = 1e-06
 Identities = 76/252 (30%), Positives = 90/252 (35%), Gaps = 12/252 (4%)
 Frame = +1

Query: 976  RCTWRRSFRWCWNVWXXXXXXXXXXXCWKIGRLTYRGRSFGWCWYIWRLRNRRGF----F 1143
            RC   R FRW    W           C++  R  +R R FGW  + WR    R F    F
Sbjct: 111  RCFRWRCFRWRCFRWRGFRWRYFGWRCFR--RRCFRRRDFGWRDFRWRCFRWRYFGRRCF 168

Query: 1144 GRSGYMWRVNSRGMSFWRCWRIWWLTNXXXXXXXXXXXXXXXXXXXXXXXXXXLIARGRC 1323
             R  +  R   R  S WRC+R W                                 R R 
Sbjct: 169  RRRCFRRRCFRRRRSRWRCFR-W--------------RCFRRRHFGRRHFGRRYFGRRRF 213

Query: 1324 RWRSIRNIGRIVNRRWCF-WR*WYMWRSTARGRSFRRSWYIWRLMTTTR*RSCWWSIWNI 1500
            RWR          RR CF WR  + WR   R R FR   + WR     R R   +     
Sbjct: 214  RWRCF--------RRRCFRWR-CFRWR-YFRWRCFRWRCFRWRCFRRRRFRWRCFRWRYF 263

Query: 1501 GRTINR*RCF-WRC-NW--YIWRFIAGGRCLWRRIRNIGSGRSMNR*RGF-WRCNWYIRR 1665
            GR   R RCF WRC  W  + WR+       WR  R    GR   R R F WR  ++ RR
Sbjct: 264  GRRCFRRRCFRWRCFRWRCFRWRYFRRRYFRWRYFRWRYFGRRYFRWRYFGWR--YFRRR 321

Query: 1666 FI--ARGWCLWR 1695
            +      W  WR
Sbjct: 322  YFEWCGPWWTWR 333


>gb|ABA49681.1| hypothetical protein BURPS1710b_1104 [Burkholderia pseudomallei
            1710b]
 gb|EET08040.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
          Length = 686

 Score = 62.4 bits (150), Expect = 2e-06
 Identities = 81/270 (30%), Positives = 97/270 (35%), Gaps = 16/270 (5%)
 Frame = +1

Query: 976  RCTWRRSFRWCWNVWXXXXXXXXXXXCWK--------IGRLTYRGRSFGWCWYIWRLRNR 1131
            RC  RR F+W    W           C++          R  +R R F W  + WR   R
Sbjct: 381  RCCGRRRFQWRGFGWRCFRRRCFRRQCFRWRYFGRRCFRRRCFRRRYFRWRCFRWRYFGR 440

Query: 1132 RGFFGRSGYMWRVNSRGMSFWRCWRIWWLTNXXXXXXXXXXXXXXXXXXXXXXXXXXLIA 1311
            R  F R  +  R   R    WRC+R W                                 
Sbjct: 441  R-CFRRRCFRRRRFRRRYFRWRCFR-WRYFGRRCFRRRCFRRRRFRRQCFRRRRFRWRCF 498

Query: 1312 RGRC-RWRSIRNIGRIVNRRWCFWR*WYMWRSTARGRSFRRSWYIWRLMTTTR*RSCWWS 1488
            R RC RW   R  GR   RR CF R  + WR   R R FR   + WR       R   + 
Sbjct: 499  RWRCFRW---RYFGRRCFRRRCFRRRRFRWR-RFRWRCFRWRCFRWRCFRWRCFRRRHFG 554

Query: 1489 IWNIGRTINR*RCF-WRCNWYIWRFIAGGRCLWRR-IRNIGSGRSMNR*RGF-WRC---N 1650
                GR   R RCF WRC     +     RC  RR  R    GR   R R F WRC    
Sbjct: 555  RRYFGRRRFRWRCFRWRC---FRQRCFRQRCFRRRCFRRRRFGRRCFRRRCFRWRCFRWR 611

Query: 1651 WYIRRFIARGWCLWRS-SIRNIGRSMNR*R 1737
            ++ RR+  R +  WRS   R+ GR   R R
Sbjct: 612  YFGRRYFRRRYFRWRSFRWRSFGRRYFRWR 641


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