BLASTX nr result
ID: Astragalus24_contig00000313
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus24_contig00000313
(2839 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas... 245 1e-87
dbj|GAU28992.1| hypothetical protein TSUD_391930 [Trifolium subt... 218 1e-87
dbj|GAU27744.1| hypothetical protein TSUD_215550 [Trifolium subt... 241 3e-86
gb|PNX97977.1| hypothetical protein L195_g021217, partial [Trifo... 241 3e-86
gb|ABD33394.2| FAR1; Polynucleotidyl transferase, Ribonuclease H... 221 6e-86
dbj|GAU29880.1| hypothetical protein TSUD_379700 [Trifolium subt... 241 1e-85
gb|PNY17486.1| Ty3/gypsy retrotransposon protein [Trifolium prat... 238 1e-85
dbj|GAU42077.1| hypothetical protein TSUD_326550 [Trifolium subt... 236 1e-84
dbj|GAU28744.1| hypothetical protein TSUD_372530 [Trifolium subt... 229 1e-84
gb|PNY17867.1| hypothetical protein L195_g014621, partial [Trifo... 235 2e-84
dbj|GAU25040.1| hypothetical protein TSUD_155140 [Trifolium subt... 237 2e-84
dbj|GAU16969.1| hypothetical protein TSUD_37270 [Trifolium subte... 229 5e-84
dbj|GAU17298.1| hypothetical protein TSUD_110150 [Trifolium subt... 229 1e-83
gb|PNX92424.1| retrotransposon-related protein [Trifolium pratense] 231 1e-83
gb|PNY15768.1| retrotransposon-related protein, partial [Trifoli... 233 6e-83
gb|PNX93254.1| Ty3/gypsy retrotransposon protein, partial [Trifo... 229 1e-82
dbj|GAU40717.1| hypothetical protein TSUD_263670 [Trifolium subt... 235 2e-82
gb|PNY00121.1| hypothetical protein L195_g023397 [Trifolium prat... 227 2e-82
gb|PNX92003.1| retrotransposon-related protein [Trifolium pratense] 228 2e-82
dbj|GAU50456.1| hypothetical protein TSUD_373220 [Trifolium subt... 231 4e-82
>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
finger, CCHC-type; Peptidase aspartic, active site;
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 1297
Score = 245 bits (625), Expect(2) = 1e-87
Identities = 117/173 (67%), Positives = 137/173 (79%)
Frame = +3
Query: 6 RDHMVHVASVLRALDENKLAANKKNCAFGQLGIDYLGHIISNEGVSMDPSKVACVTQWPC 185
+ HM HV VLR + + L ANKK C FGQ ++YLGH+IS EGV++DPSKV VT+WP
Sbjct: 546 KTHMEHVEEVLRIMQTHGLVANKKKCYFGQETVEYLGHLISKEGVAVDPSKVVSVTRWPI 605
Query: 186 PRNVKGVCGFLGLTRYYRKFIRNYGKTAKPLTDLTKKDGFKWGAKEQEAFDTLKERVTTA 365
P+NVKGV GFLGLT YYRKFI++YGK AKPLT+LTKKD F W K Q+AFD LK R+TT+
Sbjct: 606 PKNVKGVRGFLGLTDYYRKFIKDYGKIAKPLTELTKKDAFMWNEKTQDAFDQLKRRLTTS 665
Query: 366 PVLVLPDFNKEFVIESDALGNKLGAILLQQGRPIAYYSKALGERNLAKSAYEK 524
PVL LPDFNKEFVIE DA G +GAIL+Q +P+AYYSKALG RNL KSAYEK
Sbjct: 666 PVLALPDFNKEFVIECDASGGGIGAILMQDRKPVAYYSKALGVRNLTKSAYEK 718
Score = 110 bits (275), Expect(2) = 1e-87
Identities = 54/77 (70%), Positives = 62/77 (80%)
Frame = +2
Query: 521 KEPMAVALSIQHWLPYILGRKFKVCTYQKSLWQLLL*RITTMDQQNWAAKLLGYQFEIVY 700
KE MAV L+IQHW PY+LGR+F V T QKSL QLL R+ T +QQNWAAKLLGY FEI+Y
Sbjct: 718 KELMAVVLAIQHWRPYLLGRRFVVSTDQKSLKQLLQQRVVTAEQQNWAAKLLGYDFEIIY 777
Query: 701 KPGLENRGADALSRMHE 751
KPG N+GADALSR+ E
Sbjct: 778 KPGKLNKGADALSRVRE 794
Score = 70.9 bits (172), Expect(3) = 1e-20
Identities = 37/110 (33%), Positives = 62/110 (56%)
Frame = +3
Query: 2265 HFMSNPLARAMGLKITETPPRYITLGDGYKTKSLG*CRDLVVLIRGMPHVVNFMLFDLDE 2444
+F+S L M + +TP I LGDG +K+ G C L V + + ++ LFDL
Sbjct: 201 NFISQQLVHKMNWAVVDTPCMSIKLGDGSYSKTKGTCEGLEVDVGDVHLEIDAQLFDLGG 260
Query: 2445 VDLVLGMGWLTSIGGM*VDWKEKLIRFDYQGEWVEEHGVKREPKELSSLQ 2594
VD+VLG+ WL ++G M V+W ++ + F + +WV G+ + +++LQ
Sbjct: 261 VDMVLGIEWLRTLGDMIVNWNKQTMSFWHNKKWVTVKGMDTQGGAIATLQ 310
Score = 45.1 bits (105), Expect(3) = 1e-20
Identities = 18/43 (41%), Positives = 30/43 (69%)
Frame = +2
Query: 2675 QQATMHKLEGKQRGELNEILDSFGEVFKEPQGLPPRRQHKHAI 2803
+ ++H L +Q EL +L+++G VF+EP GLPP+R+ +H I
Sbjct: 332 EDGSIHTLASEQSRELELLLENYGGVFQEPTGLPPKRKKEHVI 374
Score = 35.4 bits (80), Expect(3) = 1e-20
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +1
Query: 2185 SRFSMLMLLGKIVEVPVLMLVDSGATH 2265
SR + L+G I EVPV++LVDSGATH
Sbjct: 174 SRPQSIKLMGVIKEVPVVVLVDSGATH 200
Score = 66.6 bits (161), Expect = 3e-07
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Frame = +3
Query: 1722 LSRPRLVNLSRAMEHEFE-ERRKDWKDRRNGGSRFTGTVRNGGAQNNKSNGSDWVHIWGG 1898
L+R +++ ++R +E E + + + + G G+ R G +N+ N +DWV + G
Sbjct: 4 LNRSKVLQVARVVERETKGDSGMSYHRQTKSGH---GSNRGGIQGSNRGNSTDWVMVKGN 60
Query: 1899 RETAERTWSQE-------KATSHHDKKG*GHRDRGIRQLSPQAIAYRRQKGLCFKCGGCF 2057
+E S+ + + +DKK G RDR LS + R+QKGLCFKCGG F
Sbjct: 61 KEHGSAGGSKGTGFGPKGEKQAQYDKKKSGPRDRSFTHLSYNELMERKQKGLCFKCGGPF 120
Query: 2058 HPRY 2069
HP +
Sbjct: 121 HPMH 124
>dbj|GAU28992.1| hypothetical protein TSUD_391930 [Trifolium subterraneum]
Length = 1407
Score = 189 bits (479), Expect(2) = 1e-87
Identities = 103/183 (56%), Positives = 127/183 (69%), Gaps = 11/183 (6%)
Frame = +2
Query: 1058 MEAKVAAMERKIANLEISF*EIQMKATENHEKHVSLITLSKEK-----------SIADDG 1204
M A++ A+ER A E++ +IQMK +EN +K ++IT +K + DDG
Sbjct: 23 MGARLQALERNHATTEVALIDIQMKQSENFDKLFTMITRLSQKITPAENEKFFDASVDDG 82
Query: 1205 NVTPKDKGSVNNGGTKTSKIHGDALDEFRLSGKEVELPMFTGEDPARWIARAEVYFRVQD 1384
K K S + ++HGDALDEFRLS K+VELPMF+GEDPA WIARAEVYFRVQ+
Sbjct: 83 TPNVKSKPS------EIPRLHGDALDEFRLSVKKVELPMFSGEDPAGWIARAEVYFRVQN 136
Query: 1385 TNLEINVSLTQLYMGGATIHFFKALMEEDETLSWEKLKDSLLERYGGISDGSVFDQLVEL 1564
T EI V LTQL M GATIHFFKAL+EEDE L+WE LK +LLERYGG+SDG+VF+QL L
Sbjct: 137 TRPEIKVDLTQLCMEGATIHFFKALIEEDEALTWEGLKQALLERYGGVSDGNVFEQLSSL 196
Query: 1565 HQE 1573
QE
Sbjct: 197 QQE 199
Score = 166 bits (421), Expect(2) = 1e-87
Identities = 88/190 (46%), Positives = 126/190 (66%), Gaps = 12/190 (6%)
Frame = +3
Query: 1554 LLSCIRKRSVEDYIEEFDRLVAQVPRLPEEQYVGYFVHGLKDGVCGRVRSLIVLVPLSRP 1733
L S ++ SVED+IE+F+RL++QVPRL +EQY GYF+HGLK+ + GRVRSL+ L P+SR
Sbjct: 193 LSSLQQEGSVEDFIEDFERLLSQVPRLSDEQYCGYFLHGLKEEIRGRVRSLLALGPISRA 252
Query: 1734 RLVNLSRAMEHEFEERRKDWKDRRNGGSRFT---------GTVRNGGAQ-NNKSNGSDWV 1883
RL+N+++ +E EF+++ R+ GS G ++ GG+Q + +S+ +DWV
Sbjct: 253 RLMNVAKVVEREFDDKASGRFSRKPTGSSAQTGGGIQGRGGIIKTGGSQYHGRSSNTDWV 312
Query: 1884 HIWGGRETAER--TWSQEKATSHHDKKG*GHRDRGIRQLSPQAIAYRRQKGLCFKCGGCF 2057
H+ GR+ ER T+ K + DK+ RD+GIR LS Q IA RRQKGLCFKCGG F
Sbjct: 313 HVRSGRDYRERGGTFPGAKTATTGDKRDQYSRDKGIRHLSSQEIAERRQKGLCFKCGGSF 372
Query: 2058 HPRYMWMKRR 2087
HP++ R+
Sbjct: 373 HPKHQCPDRQ 382
Score = 218 bits (554), Expect(2) = 3e-87
Identities = 107/141 (75%), Positives = 119/141 (84%), Gaps = 1/141 (0%)
Frame = +3
Query: 105 DYLGHIISN-EGVSMDPSKVACVTQWPCPRNVKGVCGFLGLTRYYRKFIRNYGKTAKPLT 281
D+L H+ + +G +MDPSKV CV +WP PRNVKGV GFLGLT YYRKFI+ YGK A PLT
Sbjct: 763 DHLNHLEATLKGFAMDPSKVTCVHEWPRPRNVKGVRGFLGLTGYYRKFIQGYGKIAIPLT 822
Query: 282 DLTKKDGFKWGAKEQEAFDTLKERVTTAPVLVLPDFNKEFVIESDALGNKLGAILLQQGR 461
+LTKKDGFKWG +EQEAFD LK +TTAPVL LPDFN+EFVIESDA GN LGAILLQQGR
Sbjct: 823 ELTKKDGFKWGRQEQEAFDNLKHHITTAPVLALPDFNQEFVIESDASGNGLGAILLQQGR 882
Query: 462 PIAYYSKALGERNLAKSAYEK 524
PIAY+SKAL ERNL KSAYEK
Sbjct: 883 PIAYFSKALSERNLTKSAYEK 903
Score = 136 bits (342), Expect(2) = 3e-87
Identities = 67/77 (87%), Positives = 71/77 (92%)
Frame = +2
Query: 521 KEPMAVALSIQHWLPYILGRKFKVCTYQKSLWQLLL*RITTMDQQNWAAKLLGYQFEIVY 700
KE MAVALSIQHW PY+LGR+FKVCT QKSL QLLL ITTMDQQNWAAKLLGYQFEIVY
Sbjct: 903 KELMAVALSIQHWRPYLLGRRFKVCTDQKSLEQLLLQCITTMDQQNWAAKLLGYQFEIVY 962
Query: 701 KPGLENRGADALSRMHE 751
KPGLEN+GADALSRMH+
Sbjct: 963 KPGLENKGADALSRMHD 979
Score = 119 bits (299), Expect(3) = 1e-34
Identities = 62/131 (47%), Positives = 85/131 (64%)
Frame = +3
Query: 2265 HFMSNPLARAMGLKITETPPRYITLGDGYKTKSLG*CRDLVVLIRGMPHVVNFMLFDLDE 2444
+F+S L A+GL +T+TPP I LGDG+ T G CRD+++ I+G+ V+N MLFDL+
Sbjct: 457 NFISRRLVNALGLTVTDTPPMKIKLGDGHATTIQGECRDVIIRIQGLSFVINAMLFDLNG 516
Query: 2445 VDLVLGMGWLTSIGGM*VDWKEKLIRFDYQGEWVEEHGVKREPKELSSLQE*VGYVDHGR 2624
VDLVLGM WLT IG + DW +KL+RF++ GEWVE G++ SLQE YV R
Sbjct: 517 VDLVLGMAWLTKIGCIWFDWNQKLMRFEHNGEWVEIKGMRL--VLFRSLQE---YVSDNR 571
Query: 2625 ANFKRMQILSH 2657
+F + + H
Sbjct: 572 YSFADLLLTQH 582
Score = 51.6 bits (122), Expect(3) = 1e-34
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +2
Query: 2696 LEGKQRGELNEILDSFGEVFKEPQGLPPRRQHKHAIHPL 2812
LE Q ++ +L +F EVFKEPQGLPP RQ +HAIH L
Sbjct: 599 LEATQSTDIQRLLAAFAEVFKEPQGLPPERQQEHAIHLL 637
Score = 27.3 bits (59), Expect(3) = 1e-34
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 2212 GKIVEVPVLMLVDSGATH 2265
G I VP++MLVDSG TH
Sbjct: 439 GTIRGVPLVMLVDSGTTH 456
>dbj|GAU27744.1| hypothetical protein TSUD_215550 [Trifolium subterraneum]
Length = 767
Score = 241 bits (616), Expect(2) = 3e-86
Identities = 115/172 (66%), Positives = 134/172 (77%)
Frame = +3
Query: 9 DHMVHVASVLRALDENKLAANKKNCAFGQLGIDYLGHIISNEGVSMDPSKVACVTQWPCP 188
+H+ H+ VL L E L ANK C FGQ ++YLGH+IS +GVS+DP+KV VT WP P
Sbjct: 22 EHIQHLHEVLTFLQEQGLVANKNKCHFGQQTVEYLGHLISGQGVSVDPNKVLSVTNWPTP 81
Query: 189 RNVKGVCGFLGLTRYYRKFIRNYGKTAKPLTDLTKKDGFKWGAKEQEAFDTLKERVTTAP 368
RNVKGV GFLGLT YYRKFI++YGK AKPLTD+TKKD F WG K QEAFDTLK +TTAP
Sbjct: 82 RNVKGVRGFLGLTGYYRKFIKDYGKVAKPLTDMTKKDAFVWGVKAQEAFDTLKRNLTTAP 141
Query: 369 VLVLPDFNKEFVIESDALGNKLGAILLQQGRPIAYYSKALGERNLAKSAYEK 524
VL LPDF K+F+IE DA G +GAIL+Q RP+AY+SKALG RNL KSAYEK
Sbjct: 142 VLALPDFTKDFIIECDASGGGIGAILMQDKRPVAYFSKALGIRNLTKSAYEK 193
Score = 109 bits (272), Expect(2) = 3e-86
Identities = 54/77 (70%), Positives = 63/77 (81%)
Frame = +2
Query: 521 KEPMAVALSIQHWLPYILGRKFKVCTYQKSLWQLLL*RITTMDQQNWAAKLLGYQFEIVY 700
KE MAV L+IQHW PY++GRKF V T QKSL QLL R+ + DQQNWAAKLLGY F+IVY
Sbjct: 193 KELMAVVLAIQHWRPYLIGRKFIVSTDQKSLKQLLQQRMVSADQQNWAAKLLGYDFDIVY 252
Query: 701 KPGLENRGADALSRMHE 751
KPG N+GADALSR++E
Sbjct: 253 KPGKLNKGADALSRVNE 269
>gb|PNX97977.1| hypothetical protein L195_g021217, partial [Trifolium pratense]
Length = 1299
Score = 241 bits (614), Expect(2) = 3e-86
Identities = 115/173 (66%), Positives = 138/173 (79%)
Frame = +3
Query: 6 RDHMVHVASVLRALDENKLAANKKNCAFGQLGIDYLGHIISNEGVSMDPSKVACVTQWPC 185
+ HM H+ VL+ L L ANKK C FGQ ++YLGH+IS EGV++DPSKV VT+WP
Sbjct: 555 QSHMKHLEEVLKILQVQGLVANKKKCHFGQGTVEYLGHLISGEGVAVDPSKVISVTKWPT 614
Query: 186 PRNVKGVCGFLGLTRYYRKFIRNYGKTAKPLTDLTKKDGFKWGAKEQEAFDTLKERVTTA 365
P+NVKGV GFLGLT YYRKFI++YGK AKPLT+LTKKD F W + +AF+ LKE++TTA
Sbjct: 615 PKNVKGVRGFLGLTGYYRKFIKDYGKIAKPLTELTKKDAFLWNEEAHKAFEVLKEKLTTA 674
Query: 366 PVLVLPDFNKEFVIESDALGNKLGAILLQQGRPIAYYSKALGERNLAKSAYEK 524
PVL+LPDFNKEFVIE DA G LGAIL+Q+ RP+AY+SKALG RNL KSAYEK
Sbjct: 675 PVLILPDFNKEFVIECDASGGGLGAILMQEKRPVAYFSKALGVRNLTKSAYEK 727
Score = 109 bits (273), Expect(2) = 3e-86
Identities = 54/77 (70%), Positives = 63/77 (81%)
Frame = +2
Query: 521 KEPMAVALSIQHWLPYILGRKFKVCTYQKSLWQLLL*RITTMDQQNWAAKLLGYQFEIVY 700
KE MAV L+IQHW PY+LGR+FKV T QKSL +LL +I T +QQNWAAKLLGY FEI Y
Sbjct: 727 KELMAVVLAIQHWRPYLLGRRFKVSTDQKSLKELLQQKIVTAEQQNWAAKLLGYDFEISY 786
Query: 701 KPGLENRGADALSRMHE 751
KPG N+GADALSR++E
Sbjct: 787 KPGKLNKGADALSRINE 803
Score = 80.1 bits (196), Expect(3) = 8e-20
Identities = 39/100 (39%), Positives = 62/100 (62%)
Frame = +3
Query: 2265 HFMSNPLARAMGLKITETPPRYITLGDGYKTKSLG*CRDLVVLIRGMPHVVNFMLFDLDE 2444
+F+S+ L M + TP I LGDG +K+ G C +L V + G+P VV+ LF+L +
Sbjct: 210 NFISHHLVHKMNWSVDNTPSMRIKLGDGSCSKTTGRCVNLEVDVEGVPIVVDVQLFELGD 269
Query: 2445 VDLVLGMGWLTSIGGM*VDWKEKLIRFDYQGEWVEEHGVK 2564
VD+VLG+ WL ++G M V+W++ + F Y +WV G++
Sbjct: 270 VDMVLGIEWLRTLGDMIVNWEKHTMSFWYHKKWVTLRGIE 309
Score = 36.6 bits (83), Expect(3) = 8e-20
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +2
Query: 2675 QQATMHKLEGKQRGELNEILDSFGEVFKEPQGLPPRRQHKHAI 2803
++ + LE Q +L+ +L+ + VF+EP GLPP+R+ +H I
Sbjct: 341 EEGSFLTLEVGQARDLDNLLNVYVGVFQEPTGLPPKRKKEHVI 383
Score = 32.0 bits (71), Expect(3) = 8e-20
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 2200 LMLLGKIVEVPVLMLVDSGATHTSCQTH 2283
+ L G I EVPV +L+DSGATH H
Sbjct: 188 IRLKGTIHEVPVSILIDSGATHNFISHH 215
Score = 81.6 bits (200), Expect = 7e-12
Identities = 52/134 (38%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Frame = +3
Query: 1698 RSLIVLVPLSRPRLVNLSRAMEHEF-----EERRKDWKDRRNGGSRFTGTVRNGGAQNNK 1862
RSL VL LSR +++ +SRA+E E K +K G+ R+GG + NK
Sbjct: 1 RSLAVLSDLSRSKVLQVSRAVEKEMGGGSGSGYHKPYKSGH-------GSTRSGGHRPNK 53
Query: 1863 SNGSDWVHIWGGRETAERTWSQ-------EKATSHHDKKG*GHRDRGIRQLSPQAIAYRR 2021
+GSDWV + +E S+ + +DKK G RDRG LS + RR
Sbjct: 54 GSGSDWVLVKESKEHTSSNGSRGNEFGPKNDKQAQYDKKRNGPRDRGFTHLSYNELMERR 113
Query: 2022 QKGLCFKCGGCFHP 2063
+KGLCFKCGG FHP
Sbjct: 114 KKGLCFKCGGPFHP 127
>gb|ABD33394.2| FAR1; Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 657
Score = 221 bits (564), Expect(2) = 6e-86
Identities = 106/141 (75%), Positives = 123/141 (87%)
Frame = +3
Query: 102 IDYLGHIISNEGVSMDPSKVACVTQWPCPRNVKGVCGFLGLTRYYRKFIRNYGKTAKPLT 281
++YLG IIS+EGV+MDP+K+ CV QWP P++VKGV GFLGLT YYRKFI++YGK AKPLT
Sbjct: 63 VEYLGPIISHEGVAMDPAKIKCVLQWPVPKHVKGVRGFLGLTSYYRKFIKDYGKLAKPLT 122
Query: 282 DLTKKDGFKWGAKEQEAFDTLKERVTTAPVLVLPDFNKEFVIESDALGNKLGAILLQQGR 461
+LTKK+GF WGA+EQ AF+ LK RVTTAPVL LPDF+KEF IESDA GN LGAILLQ GR
Sbjct: 123 ELTKKEGFMWGAQEQVAFEVLKHRVTTAPVLALPDFSKEFYIESDASGNGLGAILLQNGR 182
Query: 462 PIAYYSKALGERNLAKSAYEK 524
IAY+SKALG+RNL KSAYEK
Sbjct: 183 LIAYFSKALGDRNLTKSAYEK 203
Score = 128 bits (321), Expect(2) = 6e-86
Identities = 61/77 (79%), Positives = 69/77 (89%)
Frame = +2
Query: 521 KEPMAVALSIQHWLPYILGRKFKVCTYQKSLWQLLL*RITTMDQQNWAAKLLGYQFEIVY 700
KE MAVALSIQHW PY++GRKF VCT QKSL QLL +ITTMDQQNWAAKL GYQF+I+Y
Sbjct: 203 KELMAVALSIQHWRPYLMGRKFTVCTDQKSLRQLLQQQITTMDQQNWAAKLFGYQFDILY 262
Query: 701 KPGLENRGADALSRMHE 751
KPGLEN+GADALSR+H+
Sbjct: 263 KPGLENKGADALSRVHD 279
>dbj|GAU29880.1| hypothetical protein TSUD_379700 [Trifolium subterraneum]
Length = 1340
Score = 241 bits (615), Expect(2) = 1e-85
Identities = 115/172 (66%), Positives = 134/172 (77%)
Frame = +3
Query: 9 DHMVHVASVLRALDENKLAANKKNCAFGQLGIDYLGHIISNEGVSMDPSKVACVTQWPCP 188
+H+ H+ VL L E L ANKK C FGQ ++YLGH+IS +GVS+DP+KV VT WP P
Sbjct: 559 EHIQHLHEVLNFLQEQGLVANKKKCHFGQQTVEYLGHLISGQGVSVDPNKVVSVTNWPTP 618
Query: 189 RNVKGVCGFLGLTRYYRKFIRNYGKTAKPLTDLTKKDGFKWGAKEQEAFDTLKERVTTAP 368
RNVKGV GFLGLT YYRKFI++YGK AKPLTD+TKKD F WG K QEAFDTLK +TTAP
Sbjct: 619 RNVKGVRGFLGLTGYYRKFIKDYGKVAKPLTDMTKKDAFVWGVKAQEAFDTLKRNLTTAP 678
Query: 369 VLVLPDFNKEFVIESDALGNKLGAILLQQGRPIAYYSKALGERNLAKSAYEK 524
VL LPDF K+F+IE DA G + AIL+Q RP+AY+SKALG RNL KSAYEK
Sbjct: 679 VLALPDFTKDFIIECDASGGGIRAILMQDKRPVAYFSKALGIRNLTKSAYEK 730
Score = 107 bits (268), Expect(2) = 1e-85
Identities = 53/77 (68%), Positives = 62/77 (80%)
Frame = +2
Query: 521 KEPMAVALSIQHWLPYILGRKFKVCTYQKSLWQLLL*RITTMDQQNWAAKLLGYQFEIVY 700
KE MAV L+IQHW PY++GRKF V T QKSL QLL R+ + DQQNWAAKLLGY F+IVY
Sbjct: 730 KELMAVVLAIQHWRPYLIGRKFIVSTDQKSLKQLLQQRMVSADQQNWAAKLLGYDFDIVY 789
Query: 701 KPGLENRGADALSRMHE 751
KPG N+GAD LSR++E
Sbjct: 790 KPGKLNKGADVLSRVNE 806
Score = 144 bits (363), Expect(2) = 6e-45
Identities = 76/172 (44%), Positives = 109/172 (63%)
Frame = +2
Query: 1058 MEAKVAAMERKIANLEISF*EIQMKATENHEKHVSLITLSKEKSIADDGNVTPKDKGSVN 1237
+EA+++ M+ +AN+E S Q + EK + ++ E+ +ADD T +
Sbjct: 8 LEAEMSGMKTTLANMEQS----QARLITLVEKSLGKKVVTDEEKVADDTTKTTGEGSVHR 63
Query: 1238 NGGTKTSKIHGDALDEFRLSGKEVELPMFTGEDPARWIARAEVYFRVQDTNLEINVSLTQ 1417
N + + G+AL EFR S K++ELP+F GEDPA WI+R E YFRVQ T E+ V+L Q
Sbjct: 64 NTQASNNMLEGEALAEFRRSVKKLELPLFFGEDPAGWISRVEFYFRVQGTRPEVKVNLAQ 123
Query: 1418 LYMGGATIHFFKALMEEDETLSWEKLKDSLLERYGGISDGSVFDQLVELHQE 1573
L M G TIHFF +L+ + E LSWE LK++LL+RYGG +G V++QL EL Q+
Sbjct: 124 LCMEGPTIHFFNSLLNDCEDLSWEGLKEALLDRYGGHGEGDVYEQLTELRQQ 175
Score = 68.6 bits (166), Expect(2) = 6e-45
Identities = 31/66 (46%), Positives = 49/66 (74%)
Frame = +3
Query: 1578 SVEDYIEEFDRLVAQVPRLPEEQYVGYFVHGLKDGVCGRVRSLIVLVPLSRPRLVNLSRA 1757
SV++YI F+ L AQ+PRLP++Q++GYF+HGLK+ + G+VRSL V+ LSR +++ +
Sbjct: 177 SVDEYINNFEYLTAQIPRLPDKQFLGYFLHGLKEEIRGKVRSLSVMGDLSRSKVLVIDDE 236
Query: 1758 MEHEFE 1775
E + E
Sbjct: 237 EEGDSE 242
Score = 57.8 bits (138), Expect(2) = 3e-08
Identities = 31/74 (41%), Positives = 43/74 (58%)
Frame = +3
Query: 2265 HFMSNPLARAMGLKITETPPRYITLGDGYKTKSLG*CRDLVVLIRGMPHVVNFMLFDLDE 2444
+F+S L M +IT P I LGDG K+ G C L + + GM VV+ LF+L
Sbjct: 302 NFISQSLVHKMNWEITNNPSMSIKLGDGSCAKTKGSCEGLEIDMEGMKVVVDTQLFELGC 361
Query: 2445 VDLVLGMGWLTSIG 2486
VD+VLG+ WL ++G
Sbjct: 362 VDVVLGIEWLRTLG 375
Score = 32.0 bits (71), Expect(2) = 3e-08
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1
Query: 2185 SRFSMLMLLGKIVEVPVLMLVDSGATH 2265
S+ ++ L G I EVPV++L+DSGA+H
Sbjct: 275 SKPQVIKLKGTIQEVPVVILIDSGASH 301
>gb|PNY17486.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
Length = 1357
Score = 238 bits (606), Expect(2) = 1e-85
Identities = 114/171 (66%), Positives = 136/171 (79%)
Frame = +3
Query: 12 HMVHVASVLRALDENKLAANKKNCAFGQLGIDYLGHIISNEGVSMDPSKVACVTQWPCPR 191
H+ H+ VL L + L AN+K C FGQ ++YLGH+I+ +GV++DP+KV V QWP P+
Sbjct: 574 HLKHLKEVLSLLSCHSLVANEKKCYFGQRTVEYLGHLITCDGVAVDPNKVKSVMQWPTPK 633
Query: 192 NVKGVCGFLGLTRYYRKFIRNYGKTAKPLTDLTKKDGFKWGAKEQEAFDTLKERVTTAPV 371
NVKGV GFLGLT YYRKFIR+YGK AKPLT+LTKKDGFKWGA+ Q AFD LK ++TTAPV
Sbjct: 634 NVKGVRGFLGLTGYYRKFIRDYGKIAKPLTELTKKDGFKWGAEAQHAFDELKNKLTTAPV 693
Query: 372 LVLPDFNKEFVIESDALGNKLGAILLQQGRPIAYYSKALGERNLAKSAYEK 524
L LPDF K FVIE DA G +GAIL+Q+ RPIAY+SKALG RNL KSAYEK
Sbjct: 694 LALPDFTKRFVIECDASGGGIGAILIQEKRPIAYFSKALGMRNLTKSAYEK 744
Score = 110 bits (276), Expect(2) = 1e-85
Identities = 55/77 (71%), Positives = 62/77 (80%)
Frame = +2
Query: 521 KEPMAVALSIQHWLPYILGRKFKVCTYQKSLWQLLL*RITTMDQQNWAAKLLGYQFEIVY 700
KE MAV L+IQHW PY+LGR+F V T QKSL QL+ RI T +QQNWAAKLLGY FEIVY
Sbjct: 744 KELMAVVLAIQHWRPYLLGRRFTVSTDQKSLKQLMQQRIVTAEQQNWAAKLLGYDFEIVY 803
Query: 701 KPGLENRGADALSRMHE 751
K G N+GADALSR+HE
Sbjct: 804 KQGRLNKGADALSRIHE 820
Score = 70.5 bits (171), Expect = 2e-08
Identities = 45/127 (35%), Positives = 64/127 (50%), Gaps = 11/127 (8%)
Frame = +3
Query: 1722 LSRPRLVNLSRAMEHEFEERRKDWKDRRNGGSRFT-GTVRNG----GAQNNKSNGSDWVH 1886
+SR +L+ ++RA+E E + + GS F G +NG G Q + +GSDWV
Sbjct: 4 MSRSKLLQVTRAVEKEV---------KGSSGSNFNRGLNKNGPYKGGTQGSNRHGSDWVM 54
Query: 1887 IWGGRETAERTWSQEKATSHHDKKG*GHR------DRGIRQLSPQAIAYRRQKGLCFKCG 2048
+ GG + + +DK+ G R DRG L+ + RRQKGLCFKCG
Sbjct: 55 VKGGSVGSTEGAKSGPSGPRNDKQAQGERRRAGPRDRGFTHLTYNEVMERRQKGLCFKCG 114
Query: 2049 GCFHPRY 2069
G FHP +
Sbjct: 115 GPFHPMH 121
Score = 60.8 bits (146), Expect(2) = 1e-07
Identities = 31/98 (31%), Positives = 52/98 (53%)
Frame = +3
Query: 2265 HFMSNPLARAMGLKITETPPRYITLGDGYKTKSLG*CRDLVVLIRGMPHVVNFMLFDLDE 2444
+F+S L M I TP + LG+G + + G C+ L + I N LF+L
Sbjct: 199 NFVSQKLVHQMDWPIDVTPQMQVKLGNGVQIATQGMCKGLEMYIGDFKLGPNLHLFELGG 258
Query: 2445 VDLVLGMGWLTSIGGM*VDWKEKLIRFDYQGEWVEEHG 2558
+D+VLG+ WL ++G ++WK++++ F +WV G
Sbjct: 259 IDVVLGIEWLKTLGNTVINWKQQVMSFWVNDKWVTLKG 296
Score = 26.6 bits (57), Expect(2) = 1e-07
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1
Query: 2212 GKIVEVPVLMLVDSGATH 2265
G I V VL+LVDSGATH
Sbjct: 181 GTIHGVEVLVLVDSGATH 198
>dbj|GAU42077.1| hypothetical protein TSUD_326550 [Trifolium subterraneum]
Length = 1545
Score = 236 bits (601), Expect(2) = 1e-84
Identities = 111/172 (64%), Positives = 136/172 (79%)
Frame = +3
Query: 9 DHMVHVASVLRALDENKLAANKKNCAFGQLGIDYLGHIISNEGVSMDPSKVACVTQWPCP 188
+H+ H+ VLR L +++L ANKK C FGQ ++YLGH+I+N GV++DPSKV VT WP P
Sbjct: 791 EHLEHLEMVLRILQKHELVANKKKCQFGQTYVEYLGHLITNLGVAVDPSKVISVTNWPVP 850
Query: 189 RNVKGVCGFLGLTRYYRKFIRNYGKTAKPLTDLTKKDGFKWGAKEQEAFDTLKERVTTAP 368
RNVKGV GFLGLT YYRKFI++Y K +PLT+LTKKDGF W Q AFD+LK+ +TTAP
Sbjct: 851 RNVKGVRGFLGLTGYYRKFIKDYDKIVRPLTELTKKDGFVWNENAQRAFDSLKKSLTTAP 910
Query: 369 VLVLPDFNKEFVIESDALGNKLGAILLQQGRPIAYYSKALGERNLAKSAYEK 524
VL LPDFNK+FVIE DA G +GAIL+Q +P+AY+SKALG RNL KSAYEK
Sbjct: 911 VLTLPDFNKDFVIECDASGEGIGAILMQDKKPVAYFSKALGVRNLTKSAYEK 962
Score = 109 bits (272), Expect(2) = 1e-84
Identities = 55/77 (71%), Positives = 61/77 (79%)
Frame = +2
Query: 521 KEPMAVALSIQHWLPYILGRKFKVCTYQKSLWQLLL*RITTMDQQNWAAKLLGYQFEIVY 700
KE M V L+IQHW PY+LGRKF V T QKSL QLL R+ T +QQNWAAKLLGY FEI+Y
Sbjct: 962 KELMVVVLAIQHWRPYLLGRKFLVSTDQKSLKQLLQQRMVTAEQQNWAAKLLGYDFEIIY 1021
Query: 701 KPGLENRGADALSRMHE 751
KPG NRGADALSR+ E
Sbjct: 1022 KPGNLNRGADALSRVGE 1038
Score = 147 bits (371), Expect(2) = 4e-62
Identities = 89/204 (43%), Positives = 124/204 (60%), Gaps = 28/204 (13%)
Frame = +2
Query: 1043 IPPKKMEAKVAA---MERKIANLEISF*EIQMKAT-----ENHEKHVSLITLSKEKSIA- 1195
+P KK +++ M+ +IA+LE + + KAT +N K +++ S KSI
Sbjct: 1 MPTKKNSSQITLIREMDERIASLETNMSGV--KATLATMEQNQAKLIAMFEKSLGKSIPV 58
Query: 1196 -----------DDGNVTPKDKGSVNNGG--------TKTSKIHGDALDEFRLSGKEVELP 1318
++G + + G NNG T ++ + G+AL EFR S K+VELP
Sbjct: 59 AEESVGQGGEKNNGEASAQHLGEKNNGEASAQHLGHTGSNHLSGEALAEFRRSVKKVELP 118
Query: 1319 MFTGEDPARWIARAEVYFRVQDTNLEINVSLTQLYMGGATIHFFKALMEEDETLSWEKLK 1498
+F GEDPA WI+RAEVYFRVQ+T E+ V+L QL M GATIHFF +L+ E+E LSWE LK
Sbjct: 119 LFDGEDPAGWISRAEVYFRVQETRPEVKVNLAQLCMEGATIHFFNSLLNENEGLSWEALK 178
Query: 1499 DSLLERYGGISDGSVFDQLVELHQ 1570
++LLERYGG +G V++QL EL Q
Sbjct: 179 EALLERYGGHGEGDVYEQLTELRQ 202
Score = 122 bits (307), Expect(2) = 4e-62
Identities = 66/177 (37%), Positives = 108/177 (61%), Gaps = 6/177 (3%)
Frame = +3
Query: 1557 LSCIRKRS-VEDYIEEFDRLVAQVPRLPEEQYVGYFVHGLKDGVCGRVRSLIVLVPLSRP 1733
L+ +R+RS V+DYI +F+ L AQ+PRLP++Q++GYF HGLK+ + +VRSL V+ LSR
Sbjct: 197 LTELRQRSNVDDYINDFEYLTAQIPRLPDKQFLGYFSHGLKEEIRRKVRSLSVMGNLSRS 256
Query: 1734 RLVNLSRAMEHEFEERRKDWKDRRNGGSRFTGT--VRNGGAQNNKSNGSDWVHIWGGRET 1907
+++ ++RA+E E +++ GS + + + G + N + DWV + E
Sbjct: 257 KVLQVARAVERE---------TKKDSGSIYNKSHKLGYGSTRTNSNRDGDWVFVKSKNEA 307
Query: 1908 AERTWS---QEKATSHHDKKG*GHRDRGIRQLSPQAIAYRRQKGLCFKCGGCFHPRY 2069
R + +++ + +D++ H DRG QLS I R++KGLCFKCGG +HP +
Sbjct: 308 GPRNFGSGPKQEKPAQNDQRRNTHHDRGFTQLSYNEIMERKKKGLCFKCGGSYHPMH 364
Score = 80.5 bits (197), Expect(3) = 2e-19
Identities = 40/110 (36%), Positives = 69/110 (62%)
Frame = +3
Query: 2265 HFMSNPLARAMGLKITETPPRYITLGDGYKTKSLG*CRDLVVLIRGMPHVVNFMLFDLDE 2444
+F+S + R M L++ + I LGDG +++ G C+ L V + G+ VV+ LF+L
Sbjct: 445 NFISQNVVRKMNLQVENSSTMNIKLGDGSCSRTRGTCKGLEVDMEGLKLVVDVQLFELGC 504
Query: 2445 VDLVLGMGWLTSIGGM*VDWKEKLIRFDYQGEWVEEHGVKREPKELSSLQ 2594
VD+VLG+ WL+++G M V+WK+ + F ++GEWV G++ + + +LQ
Sbjct: 505 VDVVLGIEWLSTLGDMIVNWKKHSMNFWFKGEWVTMRGMETQLNMMETLQ 554
Score = 37.4 bits (85), Expect(3) = 2e-19
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 2675 QQATMHKLEGKQRGELNEILDSFGEVFKEPQGLPPRRQHKHAI 2803
+ + LE Q EL +L +VF++P GLPP+R+ +H I
Sbjct: 576 EDGVLSTLEVGQTRELEHLLSLCADVFQDPTGLPPKREKEHVI 618
Score = 29.3 bits (64), Expect(3) = 2e-19
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +1
Query: 2212 GKIVEVPVLMLVDSGATH 2265
G I EVPV++L+DSGA+H
Sbjct: 427 GTIHEVPVVILIDSGASH 444
>dbj|GAU28744.1| hypothetical protein TSUD_372530 [Trifolium subterraneum]
Length = 1462
Score = 229 bits (585), Expect(2) = 1e-84
Identities = 108/172 (62%), Positives = 140/172 (81%), Gaps = 1/172 (0%)
Frame = +3
Query: 12 HMVHVASVLRALDE-NKLAANKKNCAFGQLGIDYLGHIISNEGVSMDPSKVACVTQWPCP 188
H++ + VL+ L NKL AN+K C FGQ ++YLGH+I+ GV++DP KV V QWP P
Sbjct: 718 HILELTEVLQILKRHNKLVANRKKCQFGQRAVEYLGHLITGSGVAVDPMKVQSVIQWPVP 777
Query: 189 RNVKGVCGFLGLTRYYRKFIRNYGKTAKPLTDLTKKDGFKWGAKEQEAFDTLKERVTTAP 368
+NVKGV GFLGLT YYRKFI++YGK AKPLT+LTKK+GFKWG + Q+AF+ LK+++TTAP
Sbjct: 778 KNVKGVRGFLGLTGYYRKFIKDYGKIAKPLTELTKKEGFKWGPQAQKAFEVLKQKLTTAP 837
Query: 369 VLVLPDFNKEFVIESDALGNKLGAILLQQGRPIAYYSKALGERNLAKSAYEK 524
VL LPDF+KEFV+E DA G LGAIL+Q+ +PIA++SKALG ++LAKSAYE+
Sbjct: 838 VLALPDFDKEFVVECDASGVGLGAILMQERKPIAFFSKALGGKSLAKSAYER 889
Score = 115 bits (288), Expect(2) = 1e-84
Identities = 58/79 (73%), Positives = 65/79 (82%)
Frame = +2
Query: 521 KEPMAVALSIQHWLPYILGRKFKVCTYQKSLWQLLL*RITTMDQQNWAAKLLGYQFEIVY 700
+E MAVAL++QHW PY+LGR F V T QKSL QL RITT DQQNWA KLLGYQF+IVY
Sbjct: 889 RELMAVALAVQHWCPYLLGRHFIVTTDQKSLKQLWQQRITTPDQQNWATKLLGYQFDIVY 948
Query: 701 KPGLENRGADALSRMHE*E 757
KPG+ENRGADALSR+ E E
Sbjct: 949 KPGVENRGADALSRLPEGE 967
Score = 132 bits (333), Expect = 1e-27
Identities = 75/169 (44%), Positives = 108/169 (63%), Gaps = 14/169 (8%)
Frame = +2
Query: 1055 KMEAKVAAMERKIANLEISF*----EIQMKATENHEKHVSLI--TLSKEKSIADDGNVTP 1216
KMEAK+ +E ++A+++I+F EI A EN + ++ L K+ + DD N +
Sbjct: 9 KMEAKMTDLEEEMASMKIAFSASIAEINQTARENQRALMQMMERVLGKKVVVEDDTNSSA 68
Query: 1217 KDKGSVNNG--------GTKTSKIHGDALDEFRLSGKEVELPMFTGEDPARWIARAEVYF 1372
++ G V N T S++ GDALDEFR S K++ELP F+GEDPA WI+RAEVYF
Sbjct: 69 RN-GVVTNEIPVTSSKKATTVSELRGDALDEFRRSVKKIELPAFSGEDPAGWISRAEVYF 127
Query: 1373 RVQDTNLEINVSLTQLYMGGATIHFFKALMEEDETLSWEKLKDSLLERY 1519
RVQ+T++ + + L QL M G TIHFF +L+EE+ L+WE+ K LLE +
Sbjct: 128 RVQETSVTVKMGLAQLSMEGPTIHFFNSLIEENPALTWEEFKAELLETF 176
Score = 82.4 bits (202), Expect(3) = 2e-21
Identities = 40/119 (33%), Positives = 69/119 (57%)
Frame = +3
Query: 2265 HFMSNPLARAMGLKITETPPRYITLGDGYKTKSLG*CRDLVVLIRGMPHVVNFMLFDLDE 2444
+F++ + + +G ++ TP I LGDG++T + G C ++ + + LFDLD
Sbjct: 371 NFIAKSMVQKLGWQVENTPDFRIKLGDGFQTITRGKCPQILFKTGEVSWEIEAYLFDLDG 430
Query: 2445 VDLVLGMGWLTSIGGM*VDWKEKLIRFDYQGEWVEEHGVKREPKELSSLQE*VGYVDHG 2621
VD+V+GM WL S+G M V+WK++ + F ++G WV G++ + + +LQ VG G
Sbjct: 431 VDVVVGMAWLKSLGDMIVNWKKQTMEFWHEGNWVMLKGIEGTAEAIPALQSVVGRASKG 489
Score = 43.1 bits (100), Expect(3) = 2e-21
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 5/48 (10%)
Frame = +2
Query: 2678 QATMHKLEGK-----QRGELNEILDSFGEVFKEPQGLPPRRQHKHAIH 2806
+A ++ EGK + EL IL+SF VF+EP+GLPP R HAI+
Sbjct: 498 EADLNNTEGKLEPIIEHPELKSILESFENVFQEPKGLPPCRSRDHAIN 545
Score = 28.5 bits (62), Expect(3) = 2e-21
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 2188 RFSMLMLLGKIVEVPVLMLVDSGATH 2265
+ L L I VPV++LVDSGATH
Sbjct: 345 KIQTLKLRATINGVPVVVLVDSGATH 370
>gb|PNY17867.1| hypothetical protein L195_g014621, partial [Trifolium pratense]
Length = 1501
Score = 235 bits (599), Expect(2) = 2e-84
Identities = 111/172 (64%), Positives = 136/172 (79%)
Frame = +3
Query: 9 DHMVHVASVLRALDENKLAANKKNCAFGQLGIDYLGHIISNEGVSMDPSKVACVTQWPCP 188
+HM H+ VL + +L ANKK C FGQ ++YLGH+I+ +GV++DPSK+ VT WP P
Sbjct: 337 EHMSHLKEVLHIMQSQQLVANKKKCQFGQKSVEYLGHLITYQGVAVDPSKIVSVTNWPIP 396
Query: 189 RNVKGVCGFLGLTRYYRKFIRNYGKTAKPLTDLTKKDGFKWGAKEQEAFDTLKERVTTAP 368
+NVKGV GFLGLT YYRKFI++YGK AKPLT+LTKKD F W K AF+TLK+ +TTAP
Sbjct: 397 KNVKGVRGFLGLTGYYRKFIKDYGKIAKPLTELTKKDAFVWNEKALHAFETLKKCLTTAP 456
Query: 369 VLVLPDFNKEFVIESDALGNKLGAILLQQGRPIAYYSKALGERNLAKSAYEK 524
VL LP+F KEFVIESDA G+ +GAIL+Q +PIAY+SKALG RNLAKSAYEK
Sbjct: 457 VLALPNFGKEFVIESDASGSGIGAILMQDKKPIAYFSKALGVRNLAKSAYEK 508
Score = 109 bits (273), Expect(2) = 2e-84
Identities = 55/79 (69%), Positives = 63/79 (79%)
Frame = +2
Query: 521 KEPMAVALSIQHWLPYILGRKFKVCTYQKSLWQLLL*RITTMDQQNWAAKLLGYQFEIVY 700
KE MAV LSIQHW PY++GRKF V T QKSL QLL R+ + DQQNWAAKLLGY F+I+Y
Sbjct: 508 KELMAVVLSIQHWRPYLIGRKFIVSTDQKSLKQLLQQRMVSADQQNWAAKLLGYDFDIIY 567
Query: 701 KPGLENRGADALSRMHE*E 757
KPG N GADALSR++E E
Sbjct: 568 KPGRLNNGADALSRVNEGE 586
Score = 145 bits (367), Expect(2) = 6e-59
Identities = 77/171 (45%), Positives = 111/171 (64%)
Frame = +2
Query: 1058 MEAKVAAMERKIANLEISF*EIQMKATENHEKHVSLITLSKEKSIADDGNVTPKDKGSVN 1237
+EA+++ ++ +AN+EI+ Q K EK + + I +D + +
Sbjct: 1130 LEAEISGVKTTLANMEIN----QAKLIAMFEKSIGKSVEVGNERIVEDPTQKIAEGSAQR 1185
Query: 1238 NGGTKTSKIHGDALDEFRLSGKEVELPMFTGEDPARWIARAEVYFRVQDTNLEINVSLTQ 1417
+ ++++ G+AL EFR S K+VELPMF GEDPA WI+RAE+YFRVQ+T EI V+L Q
Sbjct: 1186 VSQSGSNQLDGEALAEFRRSVKKVELPMFVGEDPAGWISRAEIYFRVQNTRPEIKVNLAQ 1245
Query: 1418 LYMGGATIHFFKALMEEDETLSWEKLKDSLLERYGGISDGSVFDQLVELHQ 1570
L M G TIHFF +L+ E+E L+WE+LK +LLERYGG +G V++QL EL Q
Sbjct: 1246 LCMEGPTIHFFNSLINENEELNWEQLKHALLERYGGHGEGDVYEQLTELRQ 1296
Score = 114 bits (284), Expect(2) = 6e-59
Identities = 70/178 (39%), Positives = 107/178 (60%), Gaps = 8/178 (4%)
Frame = +3
Query: 1557 LSCIRKR-SVEDYIEEFDRLVAQVPRLPEEQYVGYFVHGLKDGVCGRVRSLIVLVPLSRP 1733
L+ +R+R SV+DYI +F+ L AQ+PRLP++Q++GYF+HGLK+ V G+VRSL V+ LSR
Sbjct: 1291 LTELRQRGSVDDYINDFEYLTAQIPRLPDKQFLGYFLHGLKEEVRGKVRSLSVMGDLSRS 1350
Query: 1734 RLVNLSRAMEHEFEERRKDWKDRRN---GGSRFTGTVRNGGAQNNKSNGSDWVHIWGGRE 1904
+++ ++RA+E E + R N GS GT+ G+Q +K +DWV + G
Sbjct: 1351 KVLQVARAVERETKREYGSGYIRSNKSGHGSNRPGTI---GSQKDK---ADWVFVKSGAG 1404
Query: 1905 TAERTWS----QEKATSHHDKKG*GHRDRGIRQLSPQAIAYRRQKGLCFKCGGCFHPR 2066
+ + E+ + +K+ RDRG LS I R++KGLCF+CGG H +
Sbjct: 1405 DGPKDGNSGLRHERPNVNGNKRN-NFRDRGYSSLSYNEIMERKKKGLCFRCGGANHQK 1461
Score = 66.6 bits (161), Expect(2) = 5e-14
Identities = 32/92 (34%), Positives = 55/92 (59%)
Frame = +3
Query: 2331 ITLGDGYKTKSLG*CRDLVVLIRGMPHVVNFMLFDLDEVDLVLGMGWLTSIGGM*VDWKE 2510
I LGDG +++ G C L +++ G+ VV+ LF+L VD++LG+ WL ++G M V+WK
Sbjct: 13 IKLGDGSCSRTKGTCEGLEIMVDGLKVVVDVQLFELGCVDVILGIEWLRTLGDMIVNWKS 72
Query: 2511 KLIRFDYQGEWVEEHGVKREPKELSSLQE*VG 2606
+ F + +WV G+ + + +LQ +G
Sbjct: 73 HTMSFWFNKKWVTMKGIGSQLSMMETLQSVLG 104
Score = 42.4 bits (98), Expect(2) = 5e-14
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +2
Query: 2687 MHKLEGKQRGELNEILDSFGEVFKEPQGLPPRRQHKHAI 2803
+H LE Q EL ++L +VF++P+GLPP+R+ +H I
Sbjct: 126 LHSLEVNQSEELEQLLSLCADVFQDPKGLPPKRKKEHVI 164
>dbj|GAU25040.1| hypothetical protein TSUD_155140 [Trifolium subterraneum]
Length = 862
Score = 237 bits (604), Expect(2) = 2e-84
Identities = 111/173 (64%), Positives = 135/173 (78%)
Frame = +3
Query: 6 RDHMVHVASVLRALDENKLAANKKNCAFGQLGIDYLGHIISNEGVSMDPSKVACVTQWPC 185
+ HM H+ VL L +KL NKK C+F Q ++YLGH+++ GV +DPSKV V QWP
Sbjct: 65 KSHMKHLKEVLELLSVHKLVVNKKKCSFAQQSVEYLGHVVTGNGVVVDPSKVVGVLQWPQ 124
Query: 186 PRNVKGVCGFLGLTRYYRKFIRNYGKTAKPLTDLTKKDGFKWGAKEQEAFDTLKERVTTA 365
PRNVKGV GFLGLT YYRKFI++YGK AKPLT+LTKKDGFKWG + Q AFDTLK+++TTA
Sbjct: 125 PRNVKGVIGFLGLTGYYRKFIKDYGKIAKPLTELTKKDGFKWGEEAQVAFDTLKQKLTTA 184
Query: 366 PVLVLPDFNKEFVIESDALGNKLGAILLQQGRPIAYYSKALGERNLAKSAYEK 524
P+L LPDF+K FVI DA G +GAIL+Q RP+AY+SK LG RNL+KSAYEK
Sbjct: 185 PLLALPDFSKNFVIVCDASGTGIGAILMQDKRPVAYFSKTLGVRNLSKSAYEK 237
Score = 107 bits (268), Expect(2) = 2e-84
Identities = 53/84 (63%), Positives = 65/84 (77%)
Frame = +2
Query: 500 LSQICL*KEPMAVALSIQHWLPYILGRKFKVCTYQKSLWQLLL*RITTMDQQNWAAKLLG 679
LS+ KE MAV L+IQHW PY+LGRKF VCT QKSL QL+ +I T + QNWAAKL+G
Sbjct: 230 LSKSAYEKELMAVVLAIQHWRPYLLGRKFIVCTDQKSLKQLMQQKIITAEHQNWAAKLMG 289
Query: 680 YQFEIVYKPGLENRGADALSRMHE 751
Y F+I+YK G N+GADALSR++E
Sbjct: 290 YDFDIIYKQGKLNKGADALSRVYE 313
>dbj|GAU16969.1| hypothetical protein TSUD_37270 [Trifolium subterraneum]
Length = 1425
Score = 229 bits (584), Expect(2) = 5e-84
Identities = 107/172 (62%), Positives = 133/172 (77%)
Frame = +3
Query: 9 DHMVHVASVLRALDENKLAANKKNCAFGQLGIDYLGHIISNEGVSMDPSKVACVTQWPCP 188
+H+ HV VL+ L + L ANKK C FGQ ++YLGH+I+ +GV++DP+KV VT+WP P
Sbjct: 728 EHLKHVEEVLKILKLHGLVANKKKCQFGQRSVEYLGHLITGDGVAVDPNKVVSVTKWPTP 787
Query: 189 RNVKGVCGFLGLTRYYRKFIRNYGKTAKPLTDLTKKDGFKWGAKEQEAFDTLKERVTTAP 368
+NVKGV GFLGLT YYRKFI++YGK A+PLTDLTKKD F W QEAFD LK +TTAP
Sbjct: 788 KNVKGVRGFLGLTGYYRKFIKDYGKIARPLTDLTKKDAFVWNKDAQEAFDHLKSSLTTAP 847
Query: 369 VLVLPDFNKEFVIESDALGNKLGAILLQQGRPIAYYSKALGERNLAKSAYEK 524
VL LPDFNK+F+IE DA G +GAIL+Q +P+AY+ K+LG RNL KS YEK
Sbjct: 848 VLALPDFNKDFLIECDASGGGIGAILMQDKKPVAYFIKSLGVRNLTKSTYEK 899
Score = 114 bits (284), Expect(2) = 5e-84
Identities = 56/77 (72%), Positives = 62/77 (80%)
Frame = +2
Query: 521 KEPMAVALSIQHWLPYILGRKFKVCTYQKSLWQLLL*RITTMDQQNWAAKLLGYQFEIVY 700
KE MA+ L+IQHW PY+LGRKF V T QKSL QLL R+ T DQQNWA KLLGY FEI+Y
Sbjct: 899 KELMAIVLAIQHWRPYLLGRKFIVSTDQKSLKQLLQQRMVTADQQNWATKLLGYDFEIIY 958
Query: 701 KPGLENRGADALSRMHE 751
KPG NRGADALSR+HE
Sbjct: 959 KPGNLNRGADALSRIHE 975
Score = 124 bits (312), Expect = 4e-25
Identities = 67/178 (37%), Positives = 107/178 (60%), Gaps = 11/178 (6%)
Frame = +3
Query: 1569 RKRSVEDYIEEFDRLVAQVPRLPEEQYVGYFVHGLKDGVCGRVRSLIVLVPLSRPRLVNL 1748
++ SV++YI +F+ L AQ+PRLP++Q++GYF+HGLK+ + G+VRSL V+ L+R +++ L
Sbjct: 141 QRGSVDEYINDFEYLTAQIPRLPDKQFMGYFLHGLKEEIRGKVRSLTVMGELTRTKVLQL 200
Query: 1749 SRAMEHEFEERRKDWKDRRNGGSRFT----GTVRNGGAQNNKSNGSDWVHIWGGRETAER 1916
+R +E E KD G SR G+ R G ++K+NGSDWV + ++
Sbjct: 201 ARTVERETR------KDYVTGFSRSNKPGHGSNRTGPNGSSKTNGSDWVFVKNNKDQGVN 254
Query: 1917 TWSQEKAT-------SHHDKKG*GHRDRGIRQLSPQAIAYRRQKGLCFKCGGCFHPRY 2069
++ + + +D+K +R+RG LS + R+QKGL FKCGG FHP +
Sbjct: 255 GGTKNNGSGPKNERQAQYDRKRNTYRERGYAHLSYNELMERKQKGLSFKCGGAFHPMH 312
Score = 100 bits (248), Expect = 2e-17
Identities = 58/127 (45%), Positives = 85/127 (66%), Gaps = 4/127 (3%)
Frame = +2
Query: 1058 MEAKVAAMERKIANLEISF*EIQMKATENHEKHVSLITLSKEKSI-ADDGNVTPKD--KG 1228
M+ K+A++E +I+ ++ + ++ N K +++ S KSI ++D NV K +G
Sbjct: 1 MDEKIASLEEEISGVKTTLATME----RNQAKLIAMFEKSMGKSIHSEDENVAAKTMGEG 56
Query: 1229 SVNNGG-TKTSKIHGDALDEFRLSGKEVELPMFTGEDPARWIARAEVYFRVQDTNLEINV 1405
SV GG T+++ G+AL EFR S K+VELPMF G+DPA WI+RAEVYFRVQ+T E+ V
Sbjct: 57 SVQGGGRANTNQLEGEALVEFRGSVKKVELPMFDGDDPAGWISRAEVYFRVQNTRSEVKV 116
Query: 1406 SLTQLYM 1426
+L QLYM
Sbjct: 117 NLAQLYM 123
Score = 65.5 bits (158), Expect(2) = 1e-10
Identities = 34/102 (33%), Positives = 57/102 (55%)
Frame = +3
Query: 2265 HFMSNPLARAMGLKITETPPRYITLGDGYKTKSLG*CRDLVVLIRGMPHVVNFMLFDLDE 2444
+F+S L + M K + P I LGDG ++ G C L + + G+ VV+ +F+L
Sbjct: 393 NFISQSLVQKMNWKTIDCPSMNIKLGDGSCARTKGVCEGLEIDMEGVEVVVDAQVFELGC 452
Query: 2445 VDLVLGMGWLTSIGGM*VDWKEKLIRFDYQGEWVEEHGVKRE 2570
VD+VLG+ WL ++G M ++W++ + EWV G++ E
Sbjct: 453 VDVVLGIEWLRTLGDMIINWQKHTMNIWLNKEWVTLKGLEGE 494
Score = 32.0 bits (71), Expect(2) = 1e-10
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +1
Query: 2185 SRFSMLMLLGKIVEVPVLMLVDSGATH 2265
S+ ++ L G I EVPV++LVDSGA+H
Sbjct: 366 SKPQVIKLKGTIHEVPVVILVDSGASH 392
>dbj|GAU17298.1| hypothetical protein TSUD_110150 [Trifolium subterraneum]
Length = 1558
Score = 229 bits (584), Expect(2) = 1e-83
Identities = 106/173 (61%), Positives = 141/173 (81%)
Frame = +3
Query: 6 RDHMVHVASVLRALDENKLAANKKNCAFGQLGIDYLGHIISNEGVSMDPSKVACVTQWPC 185
+ H+ V+ VL+ L +N L AN+K C FGQ ++YLGH+I +GV++DP K+ VT+WP
Sbjct: 771 QQHVQEVSEVLQLLRQNSLVANRKKCQFGQRTVEYLGHLIRGDGVAVDPEKIESVTKWPT 830
Query: 186 PRNVKGVCGFLGLTRYYRKFIRNYGKTAKPLTDLTKKDGFKWGAKEQEAFDTLKERVTTA 365
P+NVKGV GFLGLT YYRKFIR+YGK AKPLT+LTKK+GFKWG++ Q+AF+ LK+++TTA
Sbjct: 831 PKNVKGVRGFLGLTGYYRKFIRDYGKIAKPLTELTKKEGFKWGSQAQKAFELLKQKLTTA 890
Query: 366 PVLVLPDFNKEFVIESDALGNKLGAILLQQGRPIAYYSKALGERNLAKSAYEK 524
PVL LP+F+K+FV+E DA G LGAIL+Q +PIA++SKAL +NLAKSAYE+
Sbjct: 891 PVLSLPNFDKDFVVECDASGVGLGAILMQGKKPIAFFSKALAGKNLAKSAYER 943
Score = 112 bits (281), Expect(2) = 1e-83
Identities = 55/77 (71%), Positives = 64/77 (83%)
Frame = +2
Query: 521 KEPMAVALSIQHWLPYILGRKFKVCTYQKSLWQLLL*RITTMDQQNWAAKLLGYQFEIVY 700
+E MAVAL++QHW PY+LGR F V T Q+SL QL +ITT DQQNWA KLLGYQF+IVY
Sbjct: 943 RELMAVALAVQHWRPYLLGRHFTVTTDQRSLKQLWQQKITTPDQQNWATKLLGYQFDIVY 1002
Query: 701 KPGLENRGADALSRMHE 751
KPG+ENRGADALSR+ E
Sbjct: 1003 KPGVENRGADALSRIPE 1019
Score = 144 bits (363), Expect(2) = 2e-62
Identities = 83/185 (44%), Positives = 117/185 (63%), Gaps = 14/185 (7%)
Frame = +2
Query: 1058 MEAKVAAMERKIANLEI----SF*EIQMKATENHEKHVSLIT--LSKEKSIADDGNVTPK 1219
MEAKVA +E++IA +++ S EIQ + + +S++ K + +D + P
Sbjct: 9 MEAKVADLEQEIALMKLAMANSMAEIQNTVKASQDAMLSMMEKHFGKRTNEVEDISSEPH 68
Query: 1220 D--------KGSVNNGGTKTSKIHGDALDEFRLSGKEVELPMFTGEDPARWIARAEVYFR 1375
KGS + TK+ +HG+ DEFR S K+VELP F G+DPA WI+ AEVYFR
Sbjct: 69 AGITKVTSLKGSASVA-TKSKPLHGEVWDEFRRSVKKVELPSFDGDDPAGWISCAEVYFR 127
Query: 1376 VQDTNLEINVSLTQLYMGGATIHFFKALMEEDETLSWEKLKDSLLERYGGISDGSVFDQL 1555
VQ+TN + VSL QL M G+TIHFF +L++E+ L+WE LK LLERYGG+ +G V++QL
Sbjct: 128 VQETNPVVKVSLAQLSMEGSTIHFFNSLLDENPDLTWEDLKSELLERYGGLGEGDVYEQL 187
Query: 1556 VELHQ 1570
E+ Q
Sbjct: 188 TEIRQ 192
Score = 127 bits (319), Expect(2) = 2e-62
Identities = 75/181 (41%), Positives = 111/181 (61%), Gaps = 12/181 (6%)
Frame = +3
Query: 1557 LSCIRKR-SVEDYIEEFDRLVAQVPRLPEEQYVGYFVHGLKDGVCGRVRSLIVLVPLSRP 1733
L+ IR+R +VEDYI+EF+RL AQVPRLPE+Q++GYF+HGLK + G+VRS + + LSR
Sbjct: 187 LTEIRQRGTVEDYIQEFERLTAQVPRLPEKQFLGYFLHGLKVEIRGKVRSFVTMGSLSRA 246
Query: 1734 RLVNLSRAMEHEFEERRKDWKDRRNGGSRFTGTVRNGGA---QNNKSNGSDWVHIWGGRE 1904
+L +++RA+E E +GGS + + GG+ + +GSDWV + GG
Sbjct: 247 KLFHVTRAVEREI-----------SGGSGWNRVTKLGGSNKGHTGRVDGSDWVFVKGG-- 293
Query: 1905 TAERTWSQEKATSHHD--------KKG*GHRDRGIRQLSPQAIAYRRQKGLCFKCGGCFH 2060
+ T + TS+ D +KG G RD+G +L + R++KGLC+KCGG +H
Sbjct: 294 SVSGTGPKSPHTSNRDTRPSGDSSRKG-GTRDKGFTRLPYHELMDRKKKGLCYKCGGPYH 352
Query: 2061 P 2063
P
Sbjct: 353 P 353
Score = 87.4 bits (215), Expect(3) = 1e-21
Identities = 42/119 (35%), Positives = 72/119 (60%)
Frame = +3
Query: 2265 HFMSNPLARAMGLKITETPPRYITLGDGYKTKSLG*CRDLVVLIRGMPHVVNFMLFDLDE 2444
+F++ PL MG K+ TP I LGDG++T + G C +++ + ++ LF+L
Sbjct: 436 NFIARPLVEKMGWKVEATPAFNIKLGDGFQTVTRGKCNQILLTTGEVSCNIDAYLFELKG 495
Query: 2445 VDLVLGMGWLTSIGGM*VDWKEKLIRFDYQGEWVEEHGVKREPKELSSLQE*VGYVDHG 2621
VD+VLGM WL ++G M V+WK++ + F + +WV G++ P+ +S+LQ +G +G
Sbjct: 496 VDVVLGMAWLKTLGDMVVNWKKQTMEFWHDKKWVTLKGMEGTPEAISALQNVIGKASNG 554
Score = 39.3 bits (90), Expect(3) = 1e-21
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 2699 EGKQRGELNEILDSFGEVFKEPQGLPPRRQHKHAI 2803
EG+ L++++ +F +VF EP+GLPP+R HAI
Sbjct: 565 EGRGDKSLDQVIQAFEDVFCEPKGLPPQRARDHAI 599
Score = 28.1 bits (61), Expect(3) = 1e-21
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 2188 RFSMLMLLGKIVEVPVLMLVDSGATH 2265
R L L I VPV++LVD GATH
Sbjct: 410 RLQTLKLAAMINGVPVVVLVDCGATH 435
>gb|PNX92424.1| retrotransposon-related protein [Trifolium pratense]
Length = 1554
Score = 231 bits (589), Expect(2) = 1e-83
Identities = 110/171 (64%), Positives = 134/171 (78%)
Frame = +3
Query: 12 HMVHVASVLRALDENKLAANKKNCAFGQLGIDYLGHIISNEGVSMDPSKVACVTQWPCPR 191
H+ H+ +VL L + L AN+K C FGQ ++YLGH+IS EGV++DP KV V QWP P+
Sbjct: 775 HLSHLNAVLELLTAHSLVANRKKCFFGQRSVEYLGHVISEEGVAVDPGKVVSVLQWPQPK 834
Query: 192 NVKGVCGFLGLTRYYRKFIRNYGKTAKPLTDLTKKDGFKWGAKEQEAFDTLKERVTTAPV 371
VKGV GFLGLT YYRKFIR+YG+ A+PLT+LTKK+GF WG + Q AF+ LK R+TTAPV
Sbjct: 835 TVKGVRGFLGLTGYYRKFIRDYGRIARPLTNLTKKEGFIWGEEAQTAFEELKTRLTTAPV 894
Query: 372 LVLPDFNKEFVIESDALGNKLGAILLQQGRPIAYYSKALGERNLAKSAYEK 524
L LPDF+K FVIE DA G +GAIL+Q+ +PIAYYSKALG RNL KSAYEK
Sbjct: 895 LALPDFSKNFVIECDASGEGIGAILMQEKKPIAYYSKALGMRNLTKSAYEK 945
Score = 110 bits (276), Expect(2) = 1e-83
Identities = 56/79 (70%), Positives = 63/79 (79%)
Frame = +2
Query: 521 KEPMAVALSIQHWLPYILGRKFKVCTYQKSLWQLLL*RITTMDQQNWAAKLLGYQFEIVY 700
KE MAV L+IQHW PY+LGRKF V T QKSL QLL RI T +QQNW+AKLLGY F+IVY
Sbjct: 945 KELMAVVLAIQHWRPYLLGRKFTVSTDQKSLKQLLQQRIVTAEQQNWSAKLLGYDFDIVY 1004
Query: 701 KPGLENRGADALSRMHE*E 757
K G N+GADALSR+HE E
Sbjct: 1005 KQGKLNKGADALSRIHEGE 1023
Score = 150 bits (379), Expect(2) = 2e-63
Identities = 80/176 (45%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Frame = +2
Query: 1055 KMEAKVAAMERKIANLEISF*EIQMKATENHEKHVSLITLSKEKSIA-DDGNVTPKDKGS 1231
KME++V A+E ++ + + ++Q E H++ ++++ KSI ++ +
Sbjct: 13 KMESRVEALEGGLSEVRTTLADVQRTVKEGHDRLIAMMEKCIGKSIVVEEPGIGADQILQ 72
Query: 1232 VNNGGTK--TSKIHGDALDEFRLSGKEVELPMFTGEDPARWIARAEVYFRVQDTNLEINV 1405
++ TK +S H +AL EFR S K VELP F G+DPA WI+RAEVYFRVQ+T I V
Sbjct: 73 ISPEKTKEESSNSHNEALVEFRHSAKRVELPSFDGDDPAGWISRAEVYFRVQNTTPAIKV 132
Query: 1406 SLTQLYMGGATIHFFKALMEEDETLSWEKLKDSLLERYGGISDGSVFDQLVELHQE 1573
SL+QL M G TIHFF +L++E+E LSW++LK++LLERYGG +G V++QL EL QE
Sbjct: 133 SLSQLCMEGPTIHFFNSLLKENEDLSWDELKEALLERYGGHGEGDVYEQLTELRQE 188
Score = 124 bits (311), Expect(2) = 2e-63
Identities = 68/171 (39%), Positives = 101/171 (59%), Gaps = 7/171 (4%)
Frame = +3
Query: 1578 SVEDYIEEFDRLVAQVPRLPEEQYVGYFVHGLKDGVCGRVRSLIVLVPLSRPRLVNLSRA 1757
+VE+YI +F+ L+AQ+P+LPE+Q+ GYF+HGLK + G+VRSL+ L +SR +L+ ++RA
Sbjct: 190 TVEEYITDFEYLIAQIPKLPEKQFQGYFLHGLKLEIRGKVRSLVALGEMSRTKLMQVTRA 249
Query: 1758 MEHEFEERRKDWKDRRNGGSRFTGTVRNGGAQNNKSNGSDWVHI-------WGGRETAER 1916
+E E + ++G G G+Q SN +DW+ + GG ++
Sbjct: 250 VEKEIQ--------GKSGTGLNRGPKHTNGSQKFGSNRNDWIFVRNKEAGGSGGVKSNNN 301
Query: 1917 TWSQEKATSHHDKKG*GHRDRGIRQLSPQAIAYRRQKGLCFKCGGCFHPRY 2069
EK + DK+ G RDRG LS + R+QKGLCFKCGG FHP +
Sbjct: 302 GLRNEK-NAQGDKRRSGSRDRGFNHLSYNELMERKQKGLCFKCGGPFHPMH 351
Score = 58.9 bits (141), Expect(2) = 4e-07
Identities = 30/98 (30%), Positives = 52/98 (53%)
Frame = +3
Query: 2265 HFMSNPLARAMGLKITETPPRYITLGDGYKTKSLG*CRDLVVLIRGMPHVVNFMLFDLDE 2444
+F+S L M + +TP + LG+G + + G CR+L V I LF+L
Sbjct: 426 NFVSQKLVHQMDWLVDDTPHLNVKLGNGAQIDTQGVCRELEVCIDEFKIKPKLHLFELGG 485
Query: 2445 VDLVLGMGWLTSIGGM*VDWKEKLIRFDYQGEWVEEHG 2558
+D+VLGM WL ++G +W+++ + F + +W+ G
Sbjct: 486 IDVVLGMEWLKTLGDTITNWRQQTMCFWWDKKWITLKG 523
Score = 26.6 bits (57), Expect(2) = 4e-07
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1
Query: 2212 GKIVEVPVLMLVDSGATH 2265
G I V VL+LVDSGATH
Sbjct: 408 GTIHGVEVLILVDSGATH 425
>gb|PNY15768.1| retrotransposon-related protein, partial [Trifolium pratense]
Length = 1583
Score = 233 bits (593), Expect(2) = 6e-83
Identities = 110/173 (63%), Positives = 134/173 (77%)
Frame = +3
Query: 6 RDHMVHVASVLRALDENKLAANKKNCAFGQLGIDYLGHIISNEGVSMDPSKVACVTQWPC 185
+ HM H+ VL L + L AN+K C F Q ++YLGH+I+ EGV++DP+KV V QWP
Sbjct: 810 KSHMKHLKEVLELLAAHSLVANRKKCNFAQNSVEYLGHLITGEGVAVDPNKVISVLQWPQ 869
Query: 186 PRNVKGVCGFLGLTRYYRKFIRNYGKTAKPLTDLTKKDGFKWGAKEQEAFDTLKERVTTA 365
P+NVKGV GFLGLT YYRKFIR+YGK AKP T+LTKKD FKW K +EAF+ LK+++TTA
Sbjct: 870 PKNVKGVRGFLGLTGYYRKFIRDYGKIAKPFTELTKKDSFKWNEKAREAFEVLKQKLTTA 929
Query: 366 PVLVLPDFNKEFVIESDALGNKLGAILLQQGRPIAYYSKALGERNLAKSAYEK 524
PVL PDF+K FVIE DA G LGAIL+Q +P+AY+SKALG RNLAKSAYEK
Sbjct: 930 PVLAFPDFSKSFVIECDASGTGLGAILMQDKKPVAYFSKALGVRNLAKSAYEK 982
Score = 107 bits (266), Expect(2) = 6e-83
Identities = 51/77 (66%), Positives = 62/77 (80%)
Frame = +2
Query: 521 KEPMAVALSIQHWLPYILGRKFKVCTYQKSLWQLLL*RITTMDQQNWAAKLLGYQFEIVY 700
KE MAV L+IQHW PY+LGRKF V T QKSL QL+ +I T +QQNWAAKL+GY F+I+Y
Sbjct: 982 KELMAVVLAIQHWRPYLLGRKFVVSTDQKSLKQLMQQKIVTAEQQNWAAKLMGYDFDIIY 1041
Query: 701 KPGLENRGADALSRMHE 751
K G N+GADALSR+H+
Sbjct: 1042 KQGKLNKGADALSRIHD 1058
Score = 164 bits (415), Expect(2) = 2e-67
Identities = 84/183 (45%), Positives = 119/183 (65%), Gaps = 9/183 (4%)
Frame = +2
Query: 1052 KKMEAKVAAMERKIANLEISF*EIQMKATENHEKHVSLITLSKEKSIADDG-NVTPKDKG 1228
K+MEA+V A+E+ A ++ + ++Q NH ++++ KS+ +DG + + +
Sbjct: 12 KEMEARVEALEKNFAGMQSTLADVQNTVKTNHTDLIAMLEKCLGKSLTEDGGSASATGQN 71
Query: 1229 SVNNGGTKTSK--------IHGDALDEFRLSGKEVELPMFTGEDPARWIARAEVYFRVQD 1384
S G K +HGDA+ EFR S K+VELP F GEDPA WI+RAEVYFRVQ
Sbjct: 72 SAARSGVTEPKTQQIPIINLHGDAMTEFRQSAKKVELPAFNGEDPAGWISRAEVYFRVQG 131
Query: 1385 TNLEINVSLTQLYMGGATIHFFKALMEEDETLSWEKLKDSLLERYGGISDGSVFDQLVEL 1564
T E+ V+L QL M G+TIHFF +L+ E+E L+W++LK+SLLERYGG +G V++QL EL
Sbjct: 132 TTPEVKVNLAQLCMEGSTIHFFNSLVGEEENLTWDRLKESLLERYGGHGEGDVYEQLTEL 191
Query: 1565 HQE 1573
QE
Sbjct: 192 KQE 194
Score = 124 bits (310), Expect(2) = 2e-67
Identities = 68/170 (40%), Positives = 99/170 (58%), Gaps = 6/170 (3%)
Frame = +3
Query: 1578 SVEDYIEEFDRLVAQVPRLPEEQYVGYFVHGLKDGVCGRVRSLIVLVPLSRPRLVNLSRA 1757
+VE+YI EF+ L+AQ+P+LPE+Q+ GYF+HGLK + G+VRSL + ++R +L+ ++RA
Sbjct: 196 TVEEYITEFEYLIAQIPKLPEKQFRGYFIHGLKTEIRGKVRSLAAMGEMNRTKLLQITRA 255
Query: 1758 MEHEFEERRKDWKDRRNGGSRFTGTVRNGGAQNNKSNGSDWVHIW------GGRETAERT 1919
+E +E R + N GSRF G+ N SDWV + GG +
Sbjct: 256 VE---KEVRGGNGSKHNHGSRFGSGSHRSGSYGPNRNRSDWVMVRRGASNNGGANSGSGE 312
Query: 1920 WSQEKATSHHDKKG*GHRDRGIRQLSPQAIAYRRQKGLCFKCGGCFHPRY 2069
+ + A + G RDRG + L+ + RRQKGLCF CGG FHPR+
Sbjct: 313 FKGQLAQGETRRN--GPRDRGFKHLTYGELMNRRQKGLCFTCGGPFHPRH 360
Score = 60.1 bits (144), Expect(2) = 2e-07
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Frame = +3
Query: 2265 HFMSNPLARAMGLKITETPPRYITLGDGYKTKSLG*CRDLVVLIRGMPHVVNFMLFDLDE 2444
+F+S L M I T + LG+G + + G C++L V I + LF+L
Sbjct: 437 NFISQKLVHQMDWPIEPTAQMNVKLGNGVQIATQGRCKELEVYIGDFKIKPDVHLFELGG 496
Query: 2445 VDLVLGMGWLTSIGGM*VDWKEKLIRFDYQGEWV---EEHGVKREPKELSSL 2591
+D+VLG+ WL ++G ++WK++ + F G+WV + G KR L S+
Sbjct: 497 IDIVLGIEWLKTLGDTIINWKQQTMSFWAFGKWVTLKNKGGCKRSNVALQSI 548
Score = 26.9 bits (58), Expect(2) = 2e-07
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1
Query: 2212 GKIVEVPVLMLVDSGATH 2265
G I V VL+LVDSGATH
Sbjct: 419 GSIHGVEVLILVDSGATH 436
>gb|PNX93254.1| Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]
Length = 1534
Score = 229 bits (585), Expect(2) = 1e-82
Identities = 108/172 (62%), Positives = 137/172 (79%)
Frame = +3
Query: 9 DHMVHVASVLRALDENKLAANKKNCAFGQLGIDYLGHIISNEGVSMDPSKVACVTQWPCP 188
+HM ++ +VL + ++L AN+K C FG+ ++YLGH+I+++GV++DPSK+ V QWP P
Sbjct: 769 EHMQNLKTVLHIMQTHELVANRKKCQFGRQSVEYLGHLITSQGVAVDPSKIESVIQWPIP 828
Query: 189 RNVKGVCGFLGLTRYYRKFIRNYGKTAKPLTDLTKKDGFKWGAKEQEAFDTLKERVTTAP 368
+NVKGV GFLGLT YYRKFI++YGK AKPLTDLTKKD F W K AF+TLK+ +TTAP
Sbjct: 829 KNVKGVRGFLGLTGYYRKFIKDYGKIAKPLTDLTKKDAFMWNEKALYAFETLKKCLTTAP 888
Query: 369 VLVLPDFNKEFVIESDALGNKLGAILLQQGRPIAYYSKALGERNLAKSAYEK 524
VL LP+F+KEF+IE DA G +GAILLQ RPIAY+SKALG RNL KSAYEK
Sbjct: 889 VLTLPNFDKEFMIECDASGGGIGAILLQDSRPIAYFSKALGVRNLTKSAYEK 940
Score = 109 bits (272), Expect(2) = 1e-82
Identities = 55/77 (71%), Positives = 62/77 (80%)
Frame = +2
Query: 521 KEPMAVALSIQHWLPYILGRKFKVCTYQKSLWQLLL*RITTMDQQNWAAKLLGYQFEIVY 700
KE MAV LSIQHW PY++GRKF V T QKSL QLL R+ + DQQNWAAKLLGY F+IVY
Sbjct: 940 KELMAVVLSIQHWRPYLIGRKFVVSTDQKSLKQLLQQRMISADQQNWAAKLLGYNFDIVY 999
Query: 701 KPGLENRGADALSRMHE 751
KPG N GADALSR++E
Sbjct: 1000 KPGRLNSGADALSRVNE 1016
Score = 150 bits (379), Expect(2) = 3e-59
Identities = 80/173 (46%), Positives = 117/173 (67%), Gaps = 1/173 (0%)
Frame = +2
Query: 1058 MEAKVAAMERKIANLEISF*EIQMKATENHEKHVSLITLSKEKSIADDGNVTPKDKGSVN 1237
M+AK+A++E +I+ ++ + ++ +N + ++L S K +AD+G +GSV
Sbjct: 14 MDAKIASLEAEISGVKTTLANME----QNQARLIALFEKSLGKPVADEGEKI--GEGSVQ 67
Query: 1238 N-GGTKTSKIHGDALDEFRLSGKEVELPMFTGEDPARWIARAEVYFRVQDTNLEINVSLT 1414
+ + ++ + D++ EFR S K+VELP+F GEDPA WI+RAEVYFRVQ+T EI V+L
Sbjct: 68 HISRSNSNHLDDDSMAEFRRSVKKVELPVFNGEDPAGWISRAEVYFRVQNTRSEIKVNLA 127
Query: 1415 QLYMGGATIHFFKALMEEDETLSWEKLKDSLLERYGGISDGSVFDQLVELHQE 1573
QL M G TIHFF +L+ E+E L WE+LK LLERYGG DG V++QL EL Q+
Sbjct: 128 QLCMEGPTIHFFNSLINENENLDWEQLKQELLERYGGHGDGDVYEQLTELRQK 180
Score = 110 bits (275), Expect(2) = 3e-59
Identities = 65/168 (38%), Positives = 105/168 (62%), Gaps = 4/168 (2%)
Frame = +3
Query: 1569 RKRSVEDYIEEFDRLVAQVPRLPEEQYVGYFVHGLKDGVCGRVRSLIVLVPLSRPRLVNL 1748
+K +V++YI +F+ L AQ+PRLP++Q++GYF+HGLK+ + G+VRSL V+ LSR +++ +
Sbjct: 179 QKGNVDEYINDFEYLTAQIPRLPDKQFLGYFLHGLKEEIRGKVRSLSVMGDLSRSKVLQV 238
Query: 1749 SRAMEHEFEERRKDWKDRRNG-GSRFTGTVRNGGAQNNKSNGSDWVHIWGGR-ETAERTW 1922
+RA+E E ++ + + G GS TG G+Q ++ SDWV + G + ++ +
Sbjct: 239 ARAVERETKKDGFGFNRNKPGHGSNRTGV---SGSQRDR---SDWVFVKNGSGDGSKESG 292
Query: 1923 SQEKATSHH--DKKG*GHRDRGIRQLSPQAIAYRRQKGLCFKCGGCFH 2060
+ K T + + + RDRG LS I RR+KGLCF+CGG H
Sbjct: 293 NGPKQTRPNVAENQKNHSRDRGYSPLSYNEIMERRKKGLCFRCGGTNH 340
Score = 72.0 bits (175), Expect(3) = 2e-19
Identities = 37/109 (33%), Positives = 62/109 (56%)
Frame = +3
Query: 2265 HFMSNPLARAMGLKITETPPRYITLGDGYKTKSLG*CRDLVVLIRGMPHVVNFMLFDLDE 2444
+F+S L M L + + I LGDG+ +K+ G C +L + I+G+ V+ LF+L
Sbjct: 423 NFISQNLVHKMNLTVNDDAALNIKLGDGFCSKTKGTCSNLEIDIKGLKVTVDVQLFELGC 482
Query: 2445 VDLVLGMGWLTSIGGM*VDWKEKLIRFDYQGEWVEEHGVKREPKELSSL 2591
VD++LG+ WL ++G M V+WK+ + F EWV G++ + +L
Sbjct: 483 VDVILGIEWLRTLGDMIVNWKKHTMSFWLNKEWVTLKGMESSLNMMDTL 531
Score = 43.5 bits (101), Expect(3) = 2e-19
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +2
Query: 2687 MHKLEGKQRGELNEILDSFGEVFKEPQGLPPRRQHKHAI 2803
+H LE +Q EL +L + +VF++P+GLPP+R +H I
Sbjct: 558 LHSLEVEQSRELEHLLSLYADVFQDPKGLPPKRNKEHVI 596
Score = 31.6 bits (70), Expect(3) = 2e-19
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +1
Query: 2197 MLMLLGKIVEVPVLMLVDSGATH 2265
++ L G I EVPV++LVDSGA+H
Sbjct: 400 VIKLQGTIQEVPVVILVDSGASH 422
>dbj|GAU40717.1| hypothetical protein TSUD_263670 [Trifolium subterraneum]
Length = 1770
Score = 235 bits (599), Expect(2) = 2e-82
Identities = 112/173 (64%), Positives = 136/173 (78%)
Frame = +3
Query: 6 RDHMVHVASVLRALDENKLAANKKNCAFGQLGIDYLGHIISNEGVSMDPSKVACVTQWPC 185
+ H+ H+ VL L ++KL AN+K C+F Q ++YLGH+I+ EGV++DP+KV V QWP
Sbjct: 892 KSHIEHLKDVLGLLSDHKLVANRKKCSFAQKSVEYLGHLITGEGVAVDPNKVVSVIQWPQ 951
Query: 186 PRNVKGVCGFLGLTRYYRKFIRNYGKTAKPLTDLTKKDGFKWGAKEQEAFDTLKERVTTA 365
PRNVKGV GFLGLT YYRKFI++YGK AKPLT+LTKKD FKW Q AF+ LKE++TTA
Sbjct: 952 PRNVKGVRGFLGLTGYYRKFIKDYGKIAKPLTELTKKDSFKWNDSAQLAFEMLKEKLTTA 1011
Query: 366 PVLVLPDFNKEFVIESDALGNKLGAILLQQGRPIAYYSKALGERNLAKSAYEK 524
PVL LPDF+K FVIE DA G LGAIL+Q +PIAY+SKALG RNLAKS YEK
Sbjct: 1012 PVLALPDFSKSFVIECDASGTGLGAILMQDKKPIAYFSKALGVRNLAKSTYEK 1064
Score = 103 bits (256), Expect(2) = 2e-82
Identities = 51/77 (66%), Positives = 60/77 (77%)
Frame = +2
Query: 521 KEPMAVALSIQHWLPYILGRKFKVCTYQKSLWQLLL*RITTMDQQNWAAKLLGYQFEIVY 700
KE MAV L+IQHW PY+LGRKF V T KSL QL+ +I T +QQNWAAKL+GY F+IVY
Sbjct: 1064 KELMAVVLAIQHWRPYLLGRKFVVSTDHKSLKQLMQQKIVTAEQQNWAAKLMGYDFDIVY 1123
Query: 701 KPGLENRGADALSRMHE 751
K G N+GADALSR+ E
Sbjct: 1124 KQGKLNKGADALSRVFE 1140
Score = 131 bits (329), Expect(2) = 1e-54
Identities = 73/156 (46%), Positives = 95/156 (60%), Gaps = 8/156 (5%)
Frame = +2
Query: 1127 MKATENHEKHVSLITLSKEKSIADDG--------NVTPKDKGSVNNGGTKTSKIHGDALD 1282
+K T ++ ++ L+ I DD + K+ ++ G+K D L
Sbjct: 126 LKYTLTSQEPLTTTILASSSKIKDDPPNRSASAVRIRKKEAIGSSSEGSKM-----DTLT 180
Query: 1283 EFRLSGKEVELPMFTGEDPARWIARAEVYFRVQDTNLEINVSLTQLYMGGATIHFFKALM 1462
EFR S K+VELP F GEDPA WI+RAEVYFRVQ T+ E+ V L QL M G TIHFF +L+
Sbjct: 181 EFRHSAKKVELPSFDGEDPAGWISRAEVYFRVQGTSPEVKVELAQLCMEGHTIHFFNSLI 240
Query: 1463 EEDETLSWEKLKDSLLERYGGISDGSVFDQLVELHQ 1570
ED+T++WE LK LLERYGG DG V++QL EL Q
Sbjct: 241 GEDDTMTWESLKVELLERYGGHGDGDVYEQLTELKQ 276
Score = 114 bits (284), Expect(2) = 1e-54
Identities = 66/174 (37%), Positives = 95/174 (54%), Gaps = 10/174 (5%)
Frame = +3
Query: 1578 SVEDYIEEFDRLVAQVPRLPEEQYVGYFVHGLKDGVCGRVRSLIVLVPLSRPRLVNLSRA 1757
SVE+YI EF+ L Q+P+LPE+Q+ GYF+HGLK + G+V SL+ + +SR +L+ ++RA
Sbjct: 279 SVEEYIMEFEYLTTQIPKLPEKQFRGYFIHGLKSEIKGKVGSLMAMGEVSRLKLLQIARA 338
Query: 1758 MEHEFEERRKDWKDRRNGGSRFTGTVRNGGAQNNKS---NGSDWVHI-------WGGRET 1907
+E E + GG R+G ++ S NG DW I GG +
Sbjct: 339 VEMEV----------KGGGLGLNRGFRSGSGRSTHSGGRNGPDWSIIKNREGSNGGGMRS 388
Query: 1908 AERTWSQEKATSHHDKKG*GHRDRGIRQLSPQAIAYRRQKGLCFKCGGCFHPRY 2069
++ +K+ G RDRG LS + R+QKGLCFKCGG FHP +
Sbjct: 389 NTNGPRNDRQNPGGEKRRFGPRDRGFTHLSYNELMERKQKGLCFKCGGPFHPMH 442
Score = 64.3 bits (155), Expect(2) = 7e-09
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Frame = +3
Query: 2265 HFMSNPLARAMGLKITETPPRYITLGDGYKTKSLG*CRDLVVLIRGMPHVVNFMLFDLDE 2444
+F+S L M + TP + LG+G + + G C++L + I N LF+L
Sbjct: 520 NFISQRLVHHMDWAVENTPQMQVKLGNGVQIAAQGRCKELEMYIGDFKINQNMQLFELGG 579
Query: 2445 VDLVLGMGWLTSIGGM*VDWKEKLIRFDYQGEWV---EEHGVKREPKELSSL 2591
+D+VLG+ WL ++G V+WK++ + F G+W+ + G K+ L S+
Sbjct: 580 IDVVLGIEWLNTLGDTIVNWKQQTMSFWSLGKWITLKNKEGCKQNKVALQSI 631
Score = 27.3 bits (59), Expect(2) = 7e-09
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 2191 FSMLMLLGKIVEVPVLMLVDSGATH 2265
+ + G I V VL+L+DSGATH
Sbjct: 495 YQTMKFQGTIYGVEVLILIDSGATH 519
>gb|PNY00121.1| hypothetical protein L195_g023397 [Trifolium pratense]
Length = 1118
Score = 227 bits (578), Expect(2) = 2e-82
Identities = 107/172 (62%), Positives = 135/172 (78%)
Frame = +3
Query: 9 DHMVHVASVLRALDENKLAANKKNCAFGQLGIDYLGHIISNEGVSMDPSKVACVTQWPCP 188
+HM ++ VL+ L ++L AN+K C FGQ ++YLGH+I+++GV++DPSK+ V WP P
Sbjct: 337 EHMRNLEEVLQILQSHELVANRKKCHFGQRSVEYLGHLITSQGVAVDPSKIVSVINWPIP 396
Query: 189 RNVKGVCGFLGLTRYYRKFIRNYGKTAKPLTDLTKKDGFKWGAKEQEAFDTLKERVTTAP 368
+NVKGV GFLGLT YYRKFIR+YGK AKPLT+LTKKD F W K AF+TLK+ +TTAP
Sbjct: 397 KNVKGVRGFLGLTGYYRKFIRDYGKIAKPLTELTKKDAFVWNEKALSAFETLKKCLTTAP 456
Query: 369 VLVLPDFNKEFVIESDALGNKLGAILLQQGRPIAYYSKALGERNLAKSAYEK 524
VL LP+F+KEF+IE DA G +GAIL+Q RPIAY+SKALG RNL KS YEK
Sbjct: 457 VLALPNFDKEFLIECDASGGGIGAILMQDRRPIAYFSKALGVRNLTKSVYEK 508
Score = 111 bits (277), Expect(2) = 2e-82
Identities = 56/79 (70%), Positives = 63/79 (79%)
Frame = +2
Query: 521 KEPMAVALSIQHWLPYILGRKFKVCTYQKSLWQLLL*RITTMDQQNWAAKLLGYQFEIVY 700
KE MAV LSIQHW PY++GRKF V T QKSL QLL R+ T DQQNWAAKLLGY F+I+Y
Sbjct: 508 KELMAVVLSIQHWRPYLIGRKFVVSTDQKSLKQLLQQRMVTADQQNWAAKLLGYDFDIIY 567
Query: 701 KPGLENRGADALSRMHE*E 757
KPG N GADALSR++E E
Sbjct: 568 KPGRLNSGADALSRVNEGE 586
Score = 72.0 bits (175), Expect(2) = 1e-15
Identities = 40/100 (40%), Positives = 58/100 (58%)
Frame = +3
Query: 2295 MGLKITETPPRYITLGDGYKTKSLG*CRDLVVLIRGMPHVVNFMLFDLDEVDLVLGMGWL 2474
M I + I LGDG +K+ G C DL + I G+ VV+ LFDL VD+VLG+ WL
Sbjct: 1 MNWSIENSASLNIKLGDGSCSKTKGTCVDLEIDIEGLKIVVDVQLFDLGCVDVVLGIEWL 60
Query: 2475 TSIGGM*VDWKEKLIRFDYQGEWVEEHGVKREPKELSSLQ 2594
++G M V+WK+ + F + EWV GV+ + + +LQ
Sbjct: 61 RTLGDMIVNWKKHTMSFWFNKEWVTMKGVESQLGMMETLQ 100
Score = 42.4 bits (98), Expect(2) = 1e-15
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +2
Query: 2687 MHKLEGKQRGELNEILDSFGEVFKEPQGLPPRRQHKHAI 2803
+H LE Q EL +L+ +VF++P+GLPP+R+ +H I
Sbjct: 126 LHSLEVNQSKELEHLLNMCADVFQDPKGLPPKRKKEHVI 164
>gb|PNX92003.1| retrotransposon-related protein [Trifolium pratense]
Length = 1571
Score = 228 bits (582), Expect(2) = 2e-82
Identities = 109/171 (63%), Positives = 134/171 (78%)
Frame = +3
Query: 12 HMVHVASVLRALDENKLAANKKNCAFGQLGIDYLGHIISNEGVSMDPSKVACVTQWPCPR 191
H+ H+ VL L E+ L NKK C+F + +DYLGH+I+ EGV++DPSKV V WP P+
Sbjct: 783 HLQHLEEVLSLLAEHSLVVNKKKCSFAKKSVDYLGHLITCEGVAVDPSKVISVLNWPQPK 842
Query: 192 NVKGVCGFLGLTRYYRKFIRNYGKTAKPLTDLTKKDGFKWGAKEQEAFDTLKERVTTAPV 371
NVKGV GFLGLT YYRKFI++YGK A+PLTDLTKKD FKWG + Q+AF+ LK+++T+ PV
Sbjct: 843 NVKGVRGFLGLTGYYRKFIKDYGKIARPLTDLTKKDSFKWGMEAQKAFEELKQKLTSTPV 902
Query: 372 LVLPDFNKEFVIESDALGNKLGAILLQQGRPIAYYSKALGERNLAKSAYEK 524
L LPDF+K FVIE DA G LGAIL+Q +PIAYYSKALG +NL KSAYEK
Sbjct: 903 LSLPDFSKPFVIECDASGVGLGAILMQDKKPIAYYSKALGVKNLTKSAYEK 953
Score = 109 bits (272), Expect(2) = 2e-82
Identities = 54/77 (70%), Positives = 62/77 (80%)
Frame = +2
Query: 521 KEPMAVALSIQHWLPYILGRKFKVCTYQKSLWQLLL*RITTMDQQNWAAKLLGYQFEIVY 700
KE MAV L+IQHW PY+LGRKF V T QKSL +L+ +I T +QQNWAAKLLGY F+IVY
Sbjct: 953 KELMAVVLAIQHWRPYLLGRKFIVSTDQKSLKELMQQKIVTAEQQNWAAKLLGYNFDIVY 1012
Query: 701 KPGLENRGADALSRMHE 751
K G N+GADALSRMHE
Sbjct: 1013 KQGRLNKGADALSRMHE 1029
Score = 135 bits (340), Expect(2) = 3e-56
Identities = 73/168 (43%), Positives = 105/168 (62%)
Frame = +2
Query: 1070 VAAMERKIANLEISF*EIQMKATENHEKHVSLITLSKEKSIADDGNVTPKDKGSVNNGGT 1249
+A MER + K+ ++ + ++ S K + G+ + G+
Sbjct: 9 IAMMERSLG-----------KSIAKGDEELVVLNDSAGKGSGEGGSKHRTEGSKKQTEGS 57
Query: 1250 KTSKIHGDALDEFRLSGKEVELPMFTGEDPARWIARAEVYFRVQDTNLEINVSLTQLYMG 1429
+++++ + L EFR S K+VELPMF GEDPA WI+RAEVYFRVQ T+ E+ V+L QL M
Sbjct: 58 FSNQLNDETLLEFRRSVKKVELPMFNGEDPAGWISRAEVYFRVQGTSPEVKVNLAQLCME 117
Query: 1430 GATIHFFKALMEEDETLSWEKLKDSLLERYGGISDGSVFDQLVELHQE 1573
GATIHFF +L+ EDE L+WE LK++LL RYGG DG V++QL +L Q+
Sbjct: 118 GATIHFFNSLIGEDEGLNWEGLKEALLGRYGGHGDGDVYEQLTDLKQK 165
Score = 115 bits (287), Expect(2) = 3e-56
Identities = 71/172 (41%), Positives = 101/172 (58%), Gaps = 5/172 (2%)
Frame = +3
Query: 1569 RKRSVEDYIEEFDRLVAQVPRLPEEQYVGYFVHGLKDGVCGRVRSLIVLVPLSRPRLVNL 1748
+K +V++YI EF+ L+AQ+PRLP++Q++GYF+HGLK + G+V+SLI + +SR +L+ +
Sbjct: 164 QKGTVDEYITEFEYLIAQIPRLPDKQFLGYFLHGLKMEIRGKVQSLIAVGEMSRAKLLQV 223
Query: 1749 SRAMEHEFEERRKDWKDRRNGGSRFTGTVRNGGAQNNKSNGSDWVHIWGGRE-----TAE 1913
+RA+E E R D N G R G R+ NGSDWV I GRE A
Sbjct: 224 TRAVEKEM--RGSSGLD-YNRGPRI-GPNRSNSQGGGSRNGSDWV-IVKGREGGTGGGAR 278
Query: 1914 RTWSQEKATSHHDKKG*GHRDRGIRQLSPQAIAYRRQKGLCFKCGGCFHPRY 2069
+ ++ D + G RDRG LS + RR+KGLCFKC FHP +
Sbjct: 279 SNGPRNDKSTQGDGQRVGPRDRGFTHLSYNELMDRRKKGLCFKCKQPFHPMH 330
Score = 62.0 bits (149), Expect(2) = 4e-08
Identities = 36/110 (32%), Positives = 59/110 (53%)
Frame = +3
Query: 2265 HFMSNPLARAMGLKITETPPRYITLGDGYKTKSLG*CRDLVVLIRGMPHVVNFMLFDLDE 2444
+F+S LA M I TP + LG+G + + G CR+L + I + LF+L
Sbjct: 408 NFVSQKLAHQMDWAIESTPQMKVKLGNGVQVATQGVCRNLEIEIGEYKLRPDAHLFELGG 467
Query: 2445 VDLVLGMGWLTSIGGM*VDWKEKLIRFDYQGEWVEEHGVKREPKELSSLQ 2594
+D+VLG+ WL ++G +WK++ + F + +WV G + K L +LQ
Sbjct: 468 IDVVLGIEWLKTLGDTITNWKQQSMSFWAEHKWVTLKGREGCRKSLMALQ 517
Score = 26.9 bits (58), Expect(2) = 4e-08
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1
Query: 2212 GKIVEVPVLMLVDSGATH 2265
G I V VL+LVDSGATH
Sbjct: 390 GSIHGVEVLILVDSGATH 407
>dbj|GAU50456.1| hypothetical protein TSUD_373220 [Trifolium subterraneum]
Length = 1463
Score = 231 bits (589), Expect(2) = 4e-82
Identities = 108/157 (68%), Positives = 130/157 (82%)
Frame = +3
Query: 54 NKLAANKKNCAFGQLGIDYLGHIISNEGVSMDPSKVACVTQWPCPRNVKGVCGFLGLTRY 233
NKL NKK C+F Q ++YLGH+++ GV++DPSKV V QWP PRNVKGV GFLGLT Y
Sbjct: 700 NKLVVNKKKCSFAQQSVEYLGHVVTGNGVAVDPSKVVGVLQWPQPRNVKGVRGFLGLTGY 759
Query: 234 YRKFIRNYGKTAKPLTDLTKKDGFKWGAKEQEAFDTLKERVTTAPVLVLPDFNKEFVIES 413
YRKFI++YGK AKPLT+LTKKDGFKWG + Q AFDTLK+++TTAP+L LPDF+K FVIE
Sbjct: 760 YRKFIQDYGKIAKPLTELTKKDGFKWGKEVQVAFDTLKQKLTTAPLLALPDFSKNFVIEC 819
Query: 414 DALGNKLGAILLQQGRPIAYYSKALGERNLAKSAYEK 524
DA G +GAIL+Q RP+AY+SKALG RNL+KSAYEK
Sbjct: 820 DASGTGIGAILMQDKRPVAYFSKALGVRNLSKSAYEK 856
Score = 105 bits (263), Expect(2) = 4e-82
Identities = 53/84 (63%), Positives = 65/84 (77%)
Frame = +2
Query: 500 LSQICL*KEPMAVALSIQHWLPYILGRKFKVCTYQKSLWQLLL*RITTMDQQNWAAKLLG 679
LS+ KE MAV L+IQHW PY+LGRKF V T QKSL QL+ +I T +QQNWAAKL+G
Sbjct: 849 LSKSAYEKELMAVVLAIQHWRPYLLGRKFIVSTDQKSLKQLMQQKIITAEQQNWAAKLMG 908
Query: 680 YQFEIVYKPGLENRGADALSRMHE 751
Y F+I+YK G N+GADALSR++E
Sbjct: 909 YDFDIIYKQGKLNKGADALSRVYE 932
Score = 148 bits (373), Expect(2) = 2e-64
Identities = 82/181 (45%), Positives = 111/181 (61%), Gaps = 9/181 (4%)
Frame = +2
Query: 1055 KMEAKVAAMERKIANLEISF*EIQMKATENHEKHVSLITLSKEKSIADD--GNVTPKD-- 1222
+MEA+V +E +I+ + S Q ++ NH ++ + KS+ D+ G+V K
Sbjct: 13 RMEARVNMLEGEISVVRSSLESFQAESKANHANIMAALEKLMGKSLIDEESGSVVNKTIP 72
Query: 1223 -----KGSVNNGGTKTSKIHGDALDEFRLSGKEVELPMFTGEDPARWIARAEVYFRVQDT 1387
KG G ++ D L EFR S K+VELP F GEDPA WI+RAEVYFRVQ+T
Sbjct: 73 ENHGVKGKEKANGETSNGSQADTLSEFRHSAKKVELPSFDGEDPAGWISRAEVYFRVQNT 132
Query: 1388 NLEINVSLTQLYMGGATIHFFKALMEEDETLSWEKLKDSLLERYGGISDGSVFDQLVELH 1567
E+ V L QL M G TIHFF +L+ E+E L+WE LK++LLERYGG DG +++QL EL
Sbjct: 133 TPEVKVDLAQLCMEGPTIHFFNSLVGEEEGLTWEALKEALLERYGGHGDGDIYEQLTELK 192
Query: 1568 Q 1570
Q
Sbjct: 193 Q 193
Score = 129 bits (325), Expect(2) = 2e-64
Identities = 69/167 (41%), Positives = 99/167 (59%), Gaps = 3/167 (1%)
Frame = +3
Query: 1578 SVEDYIEEFDRLVAQVPRLPEEQYVGYFVHGLKDGVCGRVRSLIVLVPLSRPRLVNLSRA 1757
+VEDYI EF+ L+AQ+PRLPE+Q+ GYF+HGLK + G+VRSL + +SR +L+ ++RA
Sbjct: 196 TVEDYITEFEYLIAQIPRLPEKQFRGYFLHGLKSEIKGKVRSLATMGEMSRTKLLQVTRA 255
Query: 1758 MEHEFEERRKDWKDRRNGGSRFTGTVRNGGAQNNKSNGSDWVHI---WGGRETAERTWSQ 1928
+E E GGS F +NG + GSDWV + GG ++ R
Sbjct: 256 VEKEV---------NGVGGSSFNHGPKNGPYRMGNKRGSDWVMVKNKEGGANSSVRNGLN 306
Query: 1929 EKATSHHDKKG*GHRDRGIRQLSPQAIAYRRQKGLCFKCGGCFHPRY 2069
+ +D++ G RD+G LS + R++KGLCFKCGG FHP +
Sbjct: 307 VDRQAQNDRRRGGPRDKGFTHLSYNELMERKKKGLCFKCGGPFHPTH 353
Score = 63.9 bits (154), Expect(2) = 3e-08
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Frame = +3
Query: 2265 HFMSNPLARAMGLKITETPPRYITLGDGYKTKSLG*CRDLVVLIRGMPHVVNFMLFDLDE 2444
+F+S L M + +T + LG+G + ++ G C++L + I N LF+L
Sbjct: 431 NFISQSLVHHMDWPVEQTQQMRVKLGNGVQIEAQGRCKELEMYIGDYKLSPNLQLFELGG 490
Query: 2445 VDLVLGMGWLTSIGGM*VDWKEKLIRFDYQGEWV---EEHGVKREPKELSSLQE 2597
+D+VLG+ WL ++G ++WK+ + F QG WV + G K+ L S+ E
Sbjct: 491 IDVVLGVEWLKTLGDTIINWKQHTMSFWEQGRWVTLGSKEGCKKHWVALQSVLE 544
Score = 25.4 bits (54), Expect(2) = 3e-08
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 2212 GKIVEVPVLMLVDSGATH 2265
G I V VL+LVDSGA+H
Sbjct: 413 GTIKGVEVLILVDSGASH 430