BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00033621
         (461 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU43894.1| hypothetical protein TSUD_399420 [Trifolium subt...    80   1e-14
gb|PNX84630.1| retrovirus-related Pol polyprotein from transposo...    72   1e-11
gb|PNX65143.1| retrovirus-related Pol polyprotein from transposo...    66   3e-10
gb|PNX93391.1| retrovirus-related Pol polyprotein from transposo...    67   4e-10
gb|PNX92373.1| retrovirus-related Pol polyprotein from transposo...    65   2e-09
dbj|GAU25648.1| hypothetical protein TSUD_265740 [Trifolium subt...    65   4e-09
gb|PNX63597.1| peptide transporter PTR2, partial [Trifolium prat...    57   1e-06
gb|PNX97526.1| hypothetical protein L195_g020756, partial [Trifo...    54   2e-06
gb|PNX84788.1| retrovirus-related Pol polyprotein from transposo...    55   3e-06
gb|PNX70440.1| retrovirus-related Pol polyprotein from transposo...    54   5e-06

>dbj|GAU43894.1| hypothetical protein TSUD_399420 [Trifolium subterraneum]
          Length = 1098

 Score = 80.5 bits (197), Expect = 1e-14
 Identities = 53/163 (32%), Positives = 73/163 (44%), Gaps = 16/163 (9%)
 Frame = +1

Query: 4    LFLSRNVTFHENVLPYTNSQPLSKWHYISPNYTETH----------------SQINQPAI 135
            +F+SRNVT+HE++LPY NS P  +W Y S +  +                  S I+ P I
Sbjct: 541  IFISRNVTYHEHILPYQNSNPPFQWSYHSTHTPQNDIPSVPGLYDSEPLVPTSNISIPPI 600

Query: 136  DPMPNQSQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVRRSTRDRQQPPH 315
            +  PN S +                                    + +RRSTR +  P H
Sbjct: 601  ETNPNSSDDITHHNTDLVSTTTPETIFSNTDDIHETDT-------INLRRSTRTKSFPSH 653

Query: 316  LSEYICNSLSIHHAKQLSPGTSYPISHFDSFSDLSESQ*KFCV 444
            LS+Y+CN LS    K  S G  YPISHF S+++LS S  KF +
Sbjct: 654  LSDYVCN-LSTDVTKSSSSGILYPISHFHSYANLSASHNKFAL 695


>gb|PNX84630.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 543

 Score = 71.6 bits (174), Expect = 1e-11
 Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 2/147 (1%)
 Frame = +1

Query: 4   LFLSRNVTFHENVLPYTNSQPLSKWHY--ISPNYTETHSQINQPAIDPMPNQSQNXXXXX 177
           +F+SRNVT+HE++LPY N  P  +W Y  I P   +  +        P+ +         
Sbjct: 84  IFISRNVTYHEHILPYQNHTPPFQWSYHSIHPTSDDISASDTITPSTPVFDDDFVVTTQS 143

Query: 178 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVRRSTRDRQQPPHLSEYICNSLSIHHA 357
                                          + +R+STR R QP HL++Y+CN LS  ++
Sbjct: 144 LAPNSDIQTTPHTSDSPPPSAPSPPPSDNNDIVIRKSTRMRSQPGHLNDYVCN-LSDAYS 202

Query: 358 KQLSPGTSYPISHFDSFSDLSESQ*KF 438
           K  S G  YPIS+F S ++LS S  KF
Sbjct: 203 KSSSQGMLYPISNFHSCANLSTSHTKF 229


>gb|PNX65143.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 215

 Score = 66.2 bits (160), Expect = 3e-10
 Identities = 48/161 (29%), Positives = 67/161 (41%), Gaps = 14/161 (8%)
 Frame = +1

Query: 4   LFLSRNVTFHENVLPYTNSQPLSKWHYISPNYTETHSQINQ--------------PAIDP 141
           +FLSRNVT +E++LPY N  P   W Y S +     +                  P+I P
Sbjct: 52  IFLSRNVTHYEHILPYQNPNPTFHWEYHSDSAQSDDTPTTPFVDVIEPSXIPXATPSIPP 111

Query: 142 MPNQSQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVRRSTRDRQQPPHLS 321
           + +Q                                         +RRSTR   +P HLS
Sbjct: 112 IIBQPSPSLSNPDTGXNDHTTDHGDTNPIPNNDH-----------LRRSTRPTHRPTHLS 160

Query: 322 EYICNSLSIHHAKQLSPGTSYPISHFDSFSDLSESQ*KFCV 444
           +++CN LS    +  SPG  YPISHF S ++LS +  KF +
Sbjct: 161 DFVCN-LSTGSVQPSSPGIPYPISHFHSCTNLSATHSKFAL 200


>gb|PNX93391.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1296

 Score = 67.4 bits (163), Expect = 4e-10
 Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 2/154 (1%)
 Frame = +1

Query: 4    LFLSRNVTFHENVLPYTNSQPLSKWHYISPNYTETHSQINQPAIDPMPNQSQNXXXXXXX 183
            +FLSRNVT HE++ PY  S P   W Y    +    S  +   ++P+ + S +       
Sbjct: 633  IFLSRNVTHHEHIFPYQPSSPKLPWDYHPSTFDNVSSNDSDITLNPISHHSPSAPCPSID 692

Query: 184  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVRRSTRDRQQPPHLSEYICNSLSIHHAKQ 363
                                         ++  R  R R+ P HLS+Y+CN+ S+  A+ 
Sbjct: 693  SASPITHLESLVTSPNLSTNAD-------ISTHRPIRQRRAPLHLSDYVCNNSSLTSAES 745

Query: 364  LSPGT--SYPISHFDSFSDLSESQ*KFCVLMFCC 459
            L+ GT   YP+S F S + LS S   + + +  C
Sbjct: 746  LTSGTKIKYPLSSFHSLTQLSPSHKAYSMSITQC 779


>gb|PNX92373.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 1125

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
 Frame = +1

Query: 1   QLFLSRNVTFHENVLPYTNS--QPLSKWHYIS------PNYTETH----SQINQPAIDPM 144
           ++F+SR+V FHE++LPY  S   P+++W Y S      P+ T +     S I  P+  P 
Sbjct: 474 EIFISRHVQFHEHILPYPTSPSNPVTQWDYFSTIPDSIPSSTASTPSIPSNIPNPSTTPT 533

Query: 145 PNQSQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVRRSTRDRQQPPHLSE 324
            + + N                                       R STR +  PP+L +
Sbjct: 534 SSDTPNSI------------------------------------TRTSTRSKAPPPYLKD 557

Query: 325 YICNSLSIHHAKQLSPGTSYPISHFDSFSDLS 420
           Y+CN  +I H+   S GT YP+SHF S+ +LS
Sbjct: 558 YVCN--AIDHSTMKSSGTPYPMSHFLSYHNLS 587


>dbj|GAU25648.1| hypothetical protein TSUD_265740 [Trifolium subterraneum]
          Length = 956

 Score = 64.7 bits (156), Expect = 4e-09
 Identities = 46/158 (29%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
 Frame = +1

Query: 4   LFLSRNVTFHENVLPYTNSQPLSKWHYIS----PNYTETHSQINQPAIDPMPNQSQNXXX 171
           LFLSR+VT HE++ PY +S P + W Y S    P +T+  S  +  A DP+ N S     
Sbjct: 427 LFLSRDVTHHEHIFPYQSSSPKTPWEYHSSDHTPPFTQPISHDSNIASDPIHNHSS---- 482

Query: 172 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVRRSTRDRQQPPHLSEYICNSLSIH 351
                                            + + R  R R+ P HLS+Y+CN+ +  
Sbjct: 483 ------PLLVFDDSQHLPPNIPLPIDHSNEPTPIPLSRPIRQRRAPLHLSDYVCNNSTSI 536

Query: 352 HAKQLSPGT--SYPISHFDSFSDLSESQ*KFCVLMFCC 459
               ++ GT   YP+S F S + LS S   F + +  C
Sbjct: 537 LPDTITSGTQSKYPLSVFHSLTQLSPSHKAFSMSLTHC 574


>gb|PNX63597.1| peptide transporter PTR2, partial [Trifolium pratense]
          Length = 253

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 28/58 (48%), Positives = 39/58 (67%)
 Frame = +1

Query: 271 VTVRRSTRDRQQPPHLSEYICNSLSIHHAKQLSPGTSYPISHFDSFSDLSESQ*KFCV 444
           +T+RRSTR   +P HLS+Y+CN LS+   +  S GT YPISH+ S ++LS    KF +
Sbjct: 95  LTLRRSTRTLTKPSHLSDYVCN-LSVDSVQPSSTGTPYPISHYHSCANLSVDHSKFAL 151


>gb|PNX97526.1| hypothetical protein L195_g020756, partial [Trifolium pratense]
          Length = 92

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 28/56 (50%), Positives = 35/56 (62%)
 Frame = +1

Query: 277 VRRSTRDRQQPPHLSEYICNSLSIHHAKQLSPGTSYPISHFDSFSDLSESQ*KFCV 444
           +RRS R   +P HL +Y+CN LS       SPG SYPISHF S ++LS S  KF +
Sbjct: 14  LRRSARPTHRPTHLFDYVCN-LSTGSVLPSSPGISYPISHFHSCANLSASHSKFAL 68


>gb|PNX84788.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 249

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 29/56 (51%), Positives = 37/56 (66%)
 Frame = +1

Query: 271 VTVRRSTRDRQQPPHLSEYICNSLSIHHAKQLSPGTSYPISHFDSFSDLSESQ*KF 438
           + +R+STR R QP HL++Y+CN LS  H+K  S    YPISHF S  +LS S  KF
Sbjct: 16  IVIRKSTRLRSQPSHLNDYVCN-LSDAHSKSSSQIMLYPISHFHSCVNLSTSHTKF 70


>gb|PNX70440.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 183

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 27/58 (46%), Positives = 38/58 (65%)
 Frame = +1

Query: 271 VTVRRSTRDRQQPPHLSEYICNSLSIHHAKQLSPGTSYPISHFDSFSDLSESQ*KFCV 444
           + +RRSTR   +P HLS+Y+CN LS+   +  S GT YPISH+ S ++LS    KF +
Sbjct: 76  LNLRRSTRTITKPSHLSDYVCN-LSVDSVQPSSTGTPYPISHYHSCANLSVDHSKFAL 132