BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00033548
         (308 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNY15195.1| ribonuclease H, partial [Trifolium pratense]           111   3e-26
gb|PNY00178.1| retrotransposon-related protein, partial [Trifoli...   106   2e-24
gb|PNX93586.1| ribonuclease H, partial [Trifolium pratense]           102   4e-23
dbj|GAU22350.1| hypothetical protein TSUD_106780 [Trifolium subt...   100   1e-22
gb|PNX92520.1| ribonuclease H, partial [Trifolium pratense]            99   6e-22
dbj|GAU12283.1| hypothetical protein TSUD_141910 [Trifolium subt...    99   9e-22
gb|PNX93226.1| ribonuclease H, partial [Trifolium pratense]            98   1e-21
gb|PNX92765.1| ribonuclease H [Trifolium pratense]                     96   8e-21
gb|PNX92852.1| hypothetical protein L195_g015995, partial [Trifo...    96   1e-20
gb|PNX83390.1| hypothetical protein L195_g039432, partial [Trifo...    94   1e-20
gb|PNX74351.1| hypothetical protein L195_g030269, partial [Trifo...    94   5e-20
dbj|GAU20604.1| hypothetical protein TSUD_33400 [Trifolium subte...    92   1e-19
dbj|GAU48983.1| hypothetical protein TSUD_245740 [Trifolium subt...    92   2e-19
gb|PNY05589.1| ribonuclease H [Trifolium pratense]                     91   4e-19
gb|PNX92211.1| ribonuclease H, partial [Trifolium pratense]            91   4e-19
gb|PNY14401.1| ribonuclease H [Trifolium pratense]                     90   8e-19
dbj|GAU41508.1| hypothetical protein TSUD_302460 [Trifolium subt...    90   1e-18
dbj|GAU51664.1| hypothetical protein TSUD_268670 [Trifolium subt...    89   2e-18
gb|PNX92714.1| ribonuclease H [Trifolium pratense]                     89   3e-18
dbj|GAU24540.1| hypothetical protein TSUD_156530 [Trifolium subt...    88   5e-18

>gb|PNY15195.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1142

 Score =  111 bits (277), Expect = 3e-26
 Identities = 50/90 (55%), Positives = 70/90 (77%)
 Frame = +2

Query: 38  PFRFEATWITHPDYLQLVETAWKKENNNVIACLNQVREDSIVFNTEIFGNIRRKKQALER 217
           PFRFEA WITHP+Y  +V+TAW K  +N I+CL+ V++DS+ FNTEIFGNIR++K  +ER
Sbjct: 189 PFRFEAAWITHPNYSDIVQTAWGKSPDNFISCLHNVQQDSLRFNTEIFGNIRKRKNQIER 248

Query: 218 RIKVIQKSHANIDFSRLVYLE*QLQ*NNDT 307
           R+K IQ++   ID +RL+Y++ +LQ   DT
Sbjct: 249 RLKGIQQTLERIDSARLIYIQRELQQEYDT 278


>gb|PNY00178.1| retrotransposon-related protein, partial [Trifolium pratense]
          Length = 951

 Score =  106 bits (264), Expect = 2e-24
 Identities = 45/89 (50%), Positives = 68/89 (76%)
 Frame = +2

Query: 38  PFRFEATWITHPDYLQLVETAWKKENNNVIACLNQVREDSIVFNTEIFGNIRRKKQALER 217
           PFRFEA W THP+Y  +V+ AW K  ++++ CL  V+EDSI+FN +IFGNIR++K+ +ER
Sbjct: 684 PFRFEAAWTTHPNYSNIVQKAWGKSTSDIVTCLRHVQEDSILFNKDIFGNIRKRKEQIER 743

Query: 218 RIKVIQKSHANIDFSRLVYLE*QLQ*NND 304
           R+K IQ++   +D +RL+YL+ +LQ + D
Sbjct: 744 RLKGIQRALERVDSARLIYLQRELQHDYD 772


>gb|PNX93586.1| ribonuclease H, partial [Trifolium pratense]
          Length = 953

 Score =  102 bits (254), Expect = 4e-23
 Identities = 49/85 (57%), Positives = 62/85 (72%)
 Frame = +2

Query: 38  PFRFEATWITHPDYLQLVETAWKKENNNVIACLNQVREDSIVFNTEIFGNIRRKKQALER 217
           PFRFEA WITHP+Y  +V+TAW +     IA LNQV+ DS++FN+ +FGNIR +K  LE+
Sbjct: 294 PFRFEAAWITHPEYQNVVQTAWSQTTPCPIAGLNQVKTDSLIFNSNVFGNIRHQKHILEK 353

Query: 218 RIKVIQKSHANIDFSRLVYLE*QLQ 292
           RIK IQ S   +D +RLVYLE  LQ
Sbjct: 354 RIKGIQLSLERVDSARLVYLEHDLQ 378


>dbj|GAU22350.1| hypothetical protein TSUD_106780 [Trifolium subterraneum]
          Length = 1200

 Score =  100 bits (250), Expect = 1e-22
 Identities = 47/89 (52%), Positives = 65/89 (73%)
 Frame = +2

Query: 38  PFRFEATWITHPDYLQLVETAWKKENNNVIACLNQVREDSIVFNTEIFGNIRRKKQALER 217
           PFRFEA WITHP Y  +V+ AW K+  +V +CL QV++DSI+FN E FGNIR+KK  +ER
Sbjct: 264 PFRFEAAWITHPTYSDIVKMAWGKQAGDVASCLLQVQQDSIIFNKESFGNIRKKKIHIER 323

Query: 218 RIKVIQKSHANIDFSRLVYLE*QLQ*NND 304
           R+K I+ +   +D +RL+YL+  LQ + D
Sbjct: 324 RLKGIKSALERVDSARLIYLQRDLQRDYD 352


>gb|PNX92520.1| ribonuclease H, partial [Trifolium pratense]
          Length = 865

 Score = 99.0 bits (245), Expect = 6e-22
 Identities = 48/85 (56%), Positives = 61/85 (71%)
 Frame = +2

Query: 38  PFRFEATWITHPDYLQLVETAWKKENNNVIACLNQVREDSIVFNTEIFGNIRRKKQALER 217
           PFRFEA WI+H DY QLV+ AW +E    IA LN +REDSI+FN E+FGNI +KK+ LE 
Sbjct: 178 PFRFEAAWISHSDYEQLVKNAWTRERGLPIAGLNTIREDSILFNKEVFGNIFKKKRKLEN 237

Query: 218 RIKVIQKSHANIDFSRLVYLE*QLQ 292
           R+  IQ+    +D +RL+ LE QLQ
Sbjct: 238 RLNGIQRVMERVDSTRLILLEQQLQ 262


>dbj|GAU12283.1| hypothetical protein TSUD_141910 [Trifolium subterraneum]
          Length = 1049

 Score = 98.6 bits (244), Expect = 9e-22
 Identities = 46/85 (54%), Positives = 59/85 (69%)
 Frame = +2

Query: 38  PFRFEATWITHPDYLQLVETAWKKENNNVIACLNQVREDSIVFNTEIFGNIRRKKQALER 217
           PFRFEA WI HPDY  +V+ AW K   + I  L QV+ DSI+FN E FGNIR++K  LER
Sbjct: 209 PFRFEAAWIIHPDYSDIVKVAWGKTAGDFIGSLQQVQHDSIIFNKECFGNIRKRKAHLER 268

Query: 218 RIKVIQKSHANIDFSRLVYLE*QLQ 292
           R+K IQ +   +D +RL+YL+  LQ
Sbjct: 269 RLKGIQNALERVDSARLIYLQRDLQ 293


>gb|PNX93226.1| ribonuclease H, partial [Trifolium pratense]
          Length = 851

 Score = 98.2 bits (243), Expect = 1e-21
 Identities = 43/85 (50%), Positives = 63/85 (74%)
 Frame = +2

Query: 38  PFRFEATWITHPDYLQLVETAWKKENNNVIACLNQVREDSIVFNTEIFGNIRRKKQALER 217
           PFRFEA W++H +Y Q+++ AW KE    +A LN ++EDSI+FN E+FGNI ++K+ LE 
Sbjct: 199 PFRFEAAWMSHSEYEQVIKNAWSKERGAPVAALNAIKEDSIIFNKEVFGNIFQRKRNLEN 258

Query: 218 RIKVIQKSHANIDFSRLVYLE*QLQ 292
           R++ IQ+S   +D +RL+ LE QLQ
Sbjct: 259 RLRGIQRSMERVDSARLIMLEHQLQ 283


>gb|PNX92765.1| ribonuclease H [Trifolium pratense]
          Length = 1310

 Score = 95.9 bits (237), Expect = 8e-21
 Identities = 45/85 (52%), Positives = 62/85 (72%)
 Frame = +2

Query: 38  PFRFEATWITHPDYLQLVETAWKKENNNVIACLNQVREDSIVFNTEIFGNIRRKKQALER 217
           PFRFEA W++H DY  +VE+AW KE    I+ L+ ++EDSI+FN E+FGNI +KK+ LE 
Sbjct: 199 PFRFEAAWMSHSDYENVVESAWTKERGCPISALHTIKEDSIIFNKEVFGNIFKKKRNLED 258

Query: 218 RIKVIQKSHANIDFSRLVYLE*QLQ 292
           R+K IQ++   +D  RL+ LE QLQ
Sbjct: 259 RLKGIQQTMERVDSVRLILLEQQLQ 283


>gb|PNX92852.1| hypothetical protein L195_g015995, partial [Trifolium pratense]
          Length = 664

 Score = 95.5 bits (236), Expect = 1e-20
 Identities = 43/85 (50%), Positives = 62/85 (72%)
 Frame = +2

Query: 38  PFRFEATWITHPDYLQLVETAWKKENNNVIACLNQVREDSIVFNTEIFGNIRRKKQALER 217
           PFRFEA WITHP+Y  +V++AW K   +++  L +V+++SI FN   FGNIR++K+ +ER
Sbjct: 249 PFRFEAAWITHPNYHDIVKSAWGKNTGDIVNSLQEVQQESINFNKVSFGNIRKRKERIER 308

Query: 218 RIKVIQKSHANIDFSRLVYLE*QLQ 292
           R+K IQ S   +D +RLVYL+  LQ
Sbjct: 309 RLKGIQSSLERVDSARLVYLQRDLQ 333


>gb|PNX83390.1| hypothetical protein L195_g039432, partial [Trifolium pratense]
          Length = 333

 Score = 93.6 bits (231), Expect = 1e-20
 Identities = 45/85 (52%), Positives = 56/85 (65%)
 Frame = +2

Query: 38  PFRFEATWITHPDYLQLVETAWKKENNNVIACLNQVREDSIVFNTEIFGNIRRKKQALER 217
           PFRFEA WI H DY  LVE+AW+  NNN I  LN VR+DSI FN E+FGNI ++K+ +E 
Sbjct: 248 PFRFEAAWIDHNDYSALVESAWRSSNNNTITALNNVRQDSITFNHEVFGNIFKRKKHIEN 307

Query: 218 RIKVIQKSHANIDFSRLVYLE*QLQ 292
           R+K +Q     +D    V LE  LQ
Sbjct: 308 RLKGVQLYLERVDSLHHVLLERDLQ 332


>gb|PNX74351.1| hypothetical protein L195_g030269, partial [Trifolium pratense]
          Length = 582

 Score = 93.6 bits (231), Expect = 5e-20
 Identities = 45/85 (52%), Positives = 56/85 (65%)
 Frame = +2

Query: 38  PFRFEATWITHPDYLQLVETAWKKENNNVIACLNQVREDSIVFNTEIFGNIRRKKQALER 217
           PFRFEA WI H DY  LVE+AW+  NNN I  LN VR+DSI FN E+FGNI ++K+ +E 
Sbjct: 497 PFRFEAAWIDHNDYSALVESAWRSSNNNTITALNNVRQDSITFNHEVFGNIFKRKKHIEN 556

Query: 218 RIKVIQKSHANIDFSRLVYLE*QLQ 292
           R+K +Q     +D    V LE  LQ
Sbjct: 557 RLKGVQLYLERVDSLHHVLLERDLQ 581


>dbj|GAU20604.1| hypothetical protein TSUD_33400 [Trifolium subterraneum]
          Length = 1174

 Score = 92.4 bits (228), Expect = 1e-19
 Identities = 45/85 (52%), Positives = 58/85 (68%)
 Frame = +2

Query: 38  PFRFEATWITHPDYLQLVETAWKKENNNVIACLNQVREDSIVFNTEIFGNIRRKKQALER 217
           PFRFEATWI H +Y  +V+ AW   N+N+   LN VRE SI FN EIFGNI  +K+ +ER
Sbjct: 159 PFRFEATWIDHEEYADVVDRAWHSANHNLTQALNNVREKSITFNREIFGNIFHRKKHIER 218

Query: 218 RIKVIQKSHANIDFSRLVYLE*QLQ 292
           R++ IQK    +D +R V LE +LQ
Sbjct: 219 RLQGIQKYLERVDSTRHVILEKELQ 243


>dbj|GAU48983.1| hypothetical protein TSUD_245740 [Trifolium subterraneum]
          Length = 1103

 Score = 92.0 bits (227), Expect = 2e-19
 Identities = 40/84 (47%), Positives = 59/84 (70%)
 Frame = +2

Query: 38  PFRFEATWITHPDYLQLVETAWKKENNNVIACLNQVREDSIVFNTEIFGNIRRKKQALER 217
           PFRF+A W TH DY QLV+  W ++ NN+I CL  V ++SI FN E+FGNI  +K+ +E 
Sbjct: 129 PFRFQAAWFTHSDYPQLVKNTWSRDRNNIIGCLQNVAQESITFNKEVFGNIFARKKEVEA 188

Query: 218 RIKVIQKSHANIDFSRLVYLE*QL 289
           R++ IQ++  NID + L+ L+ +L
Sbjct: 189 RLQGIQRALENIDSANLLRLQKEL 212


>gb|PNY05589.1| ribonuclease H [Trifolium pratense]
          Length = 1360

 Score = 90.9 bits (224), Expect = 4e-19
 Identities = 43/85 (50%), Positives = 58/85 (68%)
 Frame = +2

Query: 38  PFRFEATWITHPDYLQLVETAWKKENNNVIACLNQVREDSIVFNTEIFGNIRRKKQALER 217
           PFRFEA WI H DY ++V+ AWK  N+N +  L  VRE+SI FN E FGNI ++K+ +ER
Sbjct: 248 PFRFEAAWIDHEDYSEVVDRAWKSANHNPVLALTNVRENSITFNQETFGNIFKRKKHIER 307

Query: 218 RIKVIQKSHANIDFSRLVYLE*QLQ 292
           R++ IQ     +D +R V LE +LQ
Sbjct: 308 RLRGIQNYLERVDSTRHVILEKELQ 332


>gb|PNX92211.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1462

 Score = 90.9 bits (224), Expect = 4e-19
 Identities = 43/85 (50%), Positives = 58/85 (68%)
 Frame = +2

Query: 38  PFRFEATWITHPDYLQLVETAWKKENNNVIACLNQVREDSIVFNTEIFGNIRRKKQALER 217
           PFRFEA WI H DY ++V+ AWK  N+N +  L  VRE+SI FN E FGNI ++K+ +ER
Sbjct: 463 PFRFEAAWIDHEDYSEVVDRAWKSANHNPVLALTNVRENSITFNQETFGNIFKRKKHIER 522

Query: 218 RIKVIQKSHANIDFSRLVYLE*QLQ 292
           R++ IQ     +D +R V LE +LQ
Sbjct: 523 RLRGIQNYLERVDSTRHVILEKELQ 547


>gb|PNY14401.1| ribonuclease H [Trifolium pratense]
          Length = 1359

 Score = 90.1 bits (222), Expect = 8e-19
 Identities = 43/85 (50%), Positives = 59/85 (69%)
 Frame = +2

Query: 38  PFRFEATWITHPDYLQLVETAWKKENNNVIACLNQVREDSIVFNTEIFGNIRRKKQALER 217
           PFRFEA WI H DY ++V+ AW+  N+N+   LN  R+ SI FN EIFGNI ++K+ +ER
Sbjct: 248 PFRFEAAWINHEDYAEVVDRAWQSANHNLPLALNNARDFSITFNREIFGNIFQRKKHIER 307

Query: 218 RIKVIQKSHANIDFSRLVYLE*QLQ 292
           R++ IQK    +D +R V LE +LQ
Sbjct: 308 RLQGIQKYLERVDSTRHVLLEKELQ 332


>dbj|GAU41508.1| hypothetical protein TSUD_302460 [Trifolium subterraneum]
          Length = 1075

 Score = 89.7 bits (221), Expect = 1e-18
 Identities = 43/85 (50%), Positives = 55/85 (64%)
 Frame = +2

Query: 38  PFRFEATWITHPDYLQLVETAWKKENNNVIACLNQVREDSIVFNTEIFGNIRRKKQALER 217
           PFRFEA WI H DY  LVE AW   N+N++  LN V+ DSI FN E+FGNI R+K+ +E 
Sbjct: 40  PFRFEAAWIDHKDYSTLVERAWNSSNHNIVTALNTVKHDSINFNHEVFGNIFRRKRHIES 99

Query: 218 RIKVIQKSHANIDFSRLVYLE*QLQ 292
           R+K +Q     +D    V LE +LQ
Sbjct: 100 RLKGVQSYLERVDSLSHVLLEKELQ 124


>dbj|GAU51664.1| hypothetical protein TSUD_268670 [Trifolium subterraneum]
          Length = 1231

 Score = 89.4 bits (220), Expect = 2e-18
 Identities = 44/85 (51%), Positives = 56/85 (65%)
 Frame = +2

Query: 38  PFRFEATWITHPDYLQLVETAWKKENNNVIACLNQVREDSIVFNTEIFGNIRRKKQALER 217
           PFRFEA WI H DY  LV+ AWK  N+N++  LN VR DSI FN E+FGNI ++K+ +E 
Sbjct: 275 PFRFEAAWIDHKDYSALVDQAWKSSNHNIVIALNNVRLDSISFNHEVFGNIFKRKRHIES 334

Query: 218 RIKVIQKSHANIDFSRLVYLE*QLQ 292
           R+K IQ     +D    V LE +LQ
Sbjct: 335 RLKGIQIYLERVDSLHHVLLEKELQ 359


>gb|PNX92714.1| ribonuclease H [Trifolium pratense]
          Length = 1359

 Score = 88.6 bits (218), Expect = 3e-18
 Identities = 44/85 (51%), Positives = 57/85 (67%)
 Frame = +2

Query: 38  PFRFEATWITHPDYLQLVETAWKKENNNVIACLNQVREDSIVFNTEIFGNIRRKKQALER 217
           PFRFEA WI H DY  +VE AW   N+N +  L  VR++SI FN E+FGNI +KK+ +E 
Sbjct: 248 PFRFEAAWIDHDDYSSVVERAWCYSNHNPVTALQLVRDNSIKFNHEVFGNIFQKKKHIEA 307

Query: 218 RIKVIQKSHANIDFSRLVYLE*QLQ 292
           R+K IQK    +D +  V+LE QLQ
Sbjct: 308 RLKGIQKYLERVDSAHHVHLEYQLQ 332


>dbj|GAU24540.1| hypothetical protein TSUD_156530 [Trifolium subterraneum]
          Length = 1147

 Score = 87.8 bits (216), Expect = 5e-18
 Identities = 37/84 (44%), Positives = 58/84 (69%)
 Frame = +2

Query: 38  PFRFEATWITHPDYLQLVETAWKKENNNVIACLNQVREDSIVFNTEIFGNIRRKKQALER 217
           PFRF+A W TH DY QLV+  W ++ NN++ CL  V ++SI FN E+F NI  +K+ +E 
Sbjct: 153 PFRFQAAWFTHSDYPQLVKNTWSRDRNNIVGCLQNVAQESINFNKEVFSNIFARKKEVEA 212

Query: 218 RIKVIQKSHANIDFSRLVYLE*QL 289
           R++ IQ++  N+D + L+ L+ +L
Sbjct: 213 RLQGIQRALENVDSANLLRLQKEL 236