BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00031419
         (346 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX88255.1| retrovirus-related Pol polyprotein from transposo...    98   6e-31
dbj|GAU51775.1| hypothetical protein TSUD_415620 [Trifolium subt...    98   7e-31
gb|PNX84630.1| retrovirus-related Pol polyprotein from transposo...    97   2e-30
dbj|GAU25332.1| hypothetical protein TSUD_375950 [Trifolium subt...    94   8e-30
gb|PNY00520.1| retrovirus-related Pol polyprotein from transposo...    97   8e-30
gb|PNY11804.1| retrovirus-related Pol polyprotein from transposo...    97   8e-30
dbj|GAU22921.1| hypothetical protein TSUD_326940 [Trifolium subt...    95   1e-29
gb|PNX62837.1| retrovirus-related Pol polyprotein from transposo...    95   1e-29
dbj|GAU41434.1| hypothetical protein TSUD_98300 [Trifolium subte...    92   2e-29
gb|PNX75793.1| retrovirus-related Pol polyprotein from transposo...    96   2e-29
gb|PNX58913.1| hypothetical protein L195_g059424, partial [Trifo...    94   2e-29
gb|PNX93131.1| retrovirus-related Pol polyprotein from transposo...    92   5e-29
dbj|GAU49938.1| hypothetical protein TSUD_290950 [Trifolium subt...    94   6e-29
dbj|GAU36120.1| hypothetical protein TSUD_374830 [Trifolium subt...    92   6e-29
dbj|GAU46782.1| hypothetical protein TSUD_351810 [Trifolium subt...    91   1e-28
gb|PNX92373.1| retrovirus-related Pol polyprotein from transposo...    87   1e-28
gb|PNX63688.1| retrovirus-related Pol polyprotein from transposo...    91   2e-28
gb|PNY00469.1| retrovirus-related Pol polyprotein from transposo...    92   3e-28
dbj|GAU39523.1| hypothetical protein TSUD_222930 [Trifolium subt...    91   4e-28
dbj|GAU34412.1| hypothetical protein TSUD_217520 [Trifolium subt...    92   4e-28

>gb|PNX88255.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 439

 Score = 98.2 bits (243), Expect(2) = 6e-31
 Identities = 47/68 (69%), Positives = 56/68 (82%)
 Frame = -1

Query: 346 ARLVTKGYIQTEGIDFFNTFSPVAKMATVRTLIDVAEIKGWHIHQLNVIYAFLHGKLK*D 167
           ARLV KGY Q EG+DFF+TFSPVAKM+TVR L+ +A IK WH+HQL+V  AFLHG+LK D
Sbjct: 263 ARLVAKGYNQIEGLDFFDTFSPVAKMSTVRILLALASIKHWHLHQLDVNNAFLHGELKED 322

Query: 166 AYMTMP*G 143
            YMT+P G
Sbjct: 323 VYMTVPEG 330



 Score = 63.9 bits (154), Expect(2) = 6e-31
 Identities = 29/48 (60%), Positives = 38/48 (79%)
 Frame = -2

Query: 144 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTL 1
           V S  P+QVCKLLKS YG KQASR+WY+RL++LL+  G+ Q  AD++L
Sbjct: 331 VNSPKPNQVCKLLKSLYGLKQASRKWYERLTSLLLQQGYTQSTADYSL 378


>dbj|GAU51775.1| hypothetical protein TSUD_415620 [Trifolium subterraneum]
          Length = 1234

 Score = 97.8 bits (242), Expect(2) = 7e-31
 Identities = 46/68 (67%), Positives = 55/68 (80%)
 Frame = -1

Query: 346 ARLVTKGYIQTEGIDFFNTFSPVAKMATVRTLIDVAEIKGWHIHQLNVIYAFLHGKLK*D 167
           ARLV KGY Q EG+DFF+TFSPVAK+ TVRTL+ +A IK WH+HQL+V  AFLHG L+ D
Sbjct: 782 ARLVAKGYNQVEGLDFFDTFSPVAKLTTVRTLLAIASIKQWHLHQLDVNNAFLHGDLEED 841

Query: 166 AYMTMP*G 143
            YMT+P G
Sbjct: 842 VYMTIPDG 849



 Score = 63.9 bits (154), Expect(2) = 7e-31
 Identities = 28/48 (58%), Positives = 38/48 (79%)
 Frame = -2

Query: 144 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTL 1
           VP + P QVCKLLKS YG KQASR WY++L++LL++ G+ Q  AD++L
Sbjct: 850 VPHTKPGQVCKLLKSLYGLKQASRMWYEKLTSLLIHEGYHQSTADYSL 897


>gb|PNX84630.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 543

 Score = 96.7 bits (239), Expect(2) = 2e-30
 Identities = 46/68 (67%), Positives = 55/68 (80%)
 Frame = -1

Query: 346 ARLVTKGYIQTEGIDFFNTFSPVAKMATVRTLIDVAEIKGWHIHQLNVIYAFLHGKLK*D 167
           ARLV KGY Q EGIDFF TFSPVAK+ TVRTLI +A IK WH+HQL+V  AFLHG+L+ +
Sbjct: 301 ARLVAKGYTQVEGIDFFETFSPVAKITTVRTLIALAAIKSWHLHQLDVNNAFLHGELQEE 360

Query: 166 AYMTMP*G 143
            YM++P G
Sbjct: 361 VYMSIPQG 368



 Score = 63.5 bits (153), Expect(2) = 2e-30
 Identities = 27/48 (56%), Positives = 39/48 (81%)
 Frame = -2

Query: 144 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTL 1
           V +S P+QVCKLLKS YG KQASR+WY++L+++L+  G+ Q  +DH+L
Sbjct: 369 VTTSKPNQVCKLLKSLYGLKQASRKWYEKLTSVLLAQGYMQSSSDHSL 416


>dbj|GAU25332.1| hypothetical protein TSUD_375950 [Trifolium subterraneum]
          Length = 1298

 Score = 94.4 bits (233), Expect(2) = 8e-30
 Identities = 44/68 (64%), Positives = 55/68 (80%)
 Frame = -1

Query: 346  ARLVTKGYIQTEGIDFFNTFSPVAKMATVRTLIDVAEIKGWHIHQLNVIYAFLHGKLK*D 167
            ARLV KGY Q EG+DFF+TFSPVAK+ TVR L+  A +KGW++HQL+VI AFLHG L+ +
Sbjct: 975  ARLVAKGYNQIEGLDFFDTFSPVAKLTTVRLLLATAAVKGWYLHQLDVINAFLHGGLQEN 1034

Query: 166  AYMTMP*G 143
             YMT+P G
Sbjct: 1035 VYMTIPEG 1042



 Score = 63.9 bits (154), Expect(2) = 8e-30
 Identities = 29/48 (60%), Positives = 39/48 (81%)
 Frame = -2

Query: 144  VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTL 1
            V SS P+QVCKLLKS YG KQASR+WY++L++LL+  G+ Q  AD++L
Sbjct: 1043 VYSSKPNQVCKLLKSLYGLKQASRKWYEKLTSLLIKEGYSQSTADYSL 1090


>gb|PNY00520.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 690

 Score = 97.4 bits (241), Expect(2) = 8e-30
 Identities = 45/68 (66%), Positives = 55/68 (80%)
 Frame = -1

Query: 346 ARLVTKGYIQTEGIDFFNTFSPVAKMATVRTLIDVAEIKGWHIHQLNVIYAFLHGKLK*D 167
           ARLV KGY Q EG+DFF+TFSPVAK+ TVRTLI +A +K WH+HQ++V  AFLHG L+ D
Sbjct: 266 ARLVAKGYNQVEGLDFFDTFSPVAKITTVRTLIAIASLKSWHLHQMDVNNAFLHGDLQED 325

Query: 166 AYMTMP*G 143
            YMT+P G
Sbjct: 326 VYMTVPPG 333



 Score = 60.8 bits (146), Expect(2) = 8e-30
 Identities = 28/48 (58%), Positives = 36/48 (75%)
 Frame = -2

Query: 144 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTL 1
           V S  P+QVCKLLKS YG KQASR+WY+RL+ LL+   +KQ +  H+L
Sbjct: 334 VTSPKPNQVCKLLKSLYGLKQASRKWYERLTALLVKQRYKQSNPGHSL 381


>gb|PNY11804.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 620

 Score = 97.4 bits (241), Expect(2) = 8e-30
 Identities = 45/68 (66%), Positives = 55/68 (80%)
 Frame = -1

Query: 346 ARLVTKGYIQTEGIDFFNTFSPVAKMATVRTLIDVAEIKGWHIHQLNVIYAFLHGKLK*D 167
           ARLV KGY Q EG+DFF+TFSPVAK+ TVRTLI +A +K WH+HQ++V  AFLHG L+ D
Sbjct: 151 ARLVAKGYNQVEGLDFFDTFSPVAKITTVRTLIAIASLKSWHLHQMDVNNAFLHGDLQED 210

Query: 166 AYMTMP*G 143
            YMT+P G
Sbjct: 211 VYMTVPPG 218



 Score = 60.8 bits (146), Expect(2) = 8e-30
 Identities = 28/48 (58%), Positives = 36/48 (75%)
 Frame = -2

Query: 144 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTL 1
           V S  P+QVCKLLKS YG KQASR+WY+RL+ LL+   +KQ +  H+L
Sbjct: 219 VTSPKPNQVCKLLKSLYGLKQASRKWYERLTALLVKQRYKQSNPGHSL 266


>dbj|GAU22921.1| hypothetical protein TSUD_326940 [Trifolium subterraneum]
          Length = 1122

 Score = 94.7 bits (234), Expect(2) = 1e-29
 Identities = 44/68 (64%), Positives = 55/68 (80%)
 Frame = -1

Query: 346 ARLVTKGYIQTEGIDFFNTFSPVAKMATVRTLIDVAEIKGWHIHQLNVIYAFLHGKLK*D 167
           ARLV KGY Q EG+DFF+T+SPVAK+ TVRTLI +A IK WH+HQ++V  AFLHG+L+ D
Sbjct: 708 ARLVAKGYNQIEGLDFFDTYSPVAKITTVRTLIALASIKSWHLHQMDVNNAFLHGELQED 767

Query: 166 AYMTMP*G 143
            YM +P G
Sbjct: 768 VYMAIPQG 775



 Score = 62.8 bits (151), Expect(2) = 1e-29
 Identities = 28/48 (58%), Positives = 36/48 (75%)
 Frame = -2

Query: 144 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTL 1
           V  S P+QVCKLLKS YG KQASR+WY+RL+ LL+   + Q  +DH+L
Sbjct: 776 VKVSKPNQVCKLLKSLYGLKQASRKWYERLTGLLVQQSYSQSSSDHSL 823


>gb|PNX62837.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 297

 Score = 95.1 bits (235), Expect(2) = 1e-29
 Identities = 45/68 (66%), Positives = 55/68 (80%)
 Frame = -1

Query: 346 ARLVTKGYIQTEGIDFFNTFSPVAKMATVRTLIDVAEIKGWHIHQLNVIYAFLHGKLK*D 167
           ARLV KGY Q EGIDFF TFSPVAK+ TVRTLI +A I+ WH+HQL+V  AFLHG+L+ +
Sbjct: 15  ARLVAKGYTQVEGIDFFETFSPVAKITTVRTLIALAAIQSWHLHQLDVNNAFLHGELQEE 74

Query: 166 AYMTMP*G 143
            YM++P G
Sbjct: 75  VYMSIPQG 82



 Score = 62.4 bits (150), Expect(2) = 1e-29
 Identities = 27/48 (56%), Positives = 38/48 (79%)
 Frame = -2

Query: 144 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTL 1
           V +S P+QVCKLLKS YG KQASR+WY++L+ +L+  G+ Q  +DH+L
Sbjct: 83  VTTSRPNQVCKLLKSLYGLKQASRKWYEKLTGVLLAQGYVQSSSDHSL 130


>dbj|GAU41434.1| hypothetical protein TSUD_98300 [Trifolium subterraneum]
          Length = 891

 Score = 91.7 bits (226), Expect(2) = 2e-29
 Identities = 43/68 (63%), Positives = 54/68 (79%)
 Frame = -1

Query: 346 ARLVTKGYIQTEGIDFFNTFSPVAKMATVRTLIDVAEIKGWHIHQLNVIYAFLHGKLK*D 167
           ARLV KGY Q EG+DFF+TFSPVAK+ TVR L+ +A IKGWH+ QL+V  AFLHG+L+ +
Sbjct: 532 ARLVAKGYNQIEGLDFFDTFSPVAKLTTVRILLAIASIKGWHLRQLDVNNAFLHGELQEN 591

Query: 166 AYMTMP*G 143
            YM +P G
Sbjct: 592 VYMIIPDG 599



 Score = 65.5 bits (158), Expect(2) = 2e-29
 Identities = 29/48 (60%), Positives = 40/48 (83%)
 Frame = -2

Query: 144 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTL 1
           V  S P+QVCKLLKS YG KQASR+WY++L++LL+N G+KQ  +D++L
Sbjct: 600 VSVSKPNQVCKLLKSLYGLKQASRKWYEKLTSLLVNEGYKQSTSDYSL 647


>gb|PNX75793.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 733

 Score = 95.5 bits (236), Expect(2) = 2e-29
 Identities = 45/68 (66%), Positives = 55/68 (80%)
 Frame = -1

Query: 346 ARLVTKGYIQTEGIDFFNTFSPVAKMATVRTLIDVAEIKGWHIHQLNVIYAFLHGKLK*D 167
           ARLV KGY Q EG+DFF+TFSPVAK+ TVR LI +A +K WH+HQL+V  AFLHG+L+ D
Sbjct: 240 ARLVAKGYNQIEGLDFFDTFSPVAKITTVRILIALASLKSWHLHQLDVNNAFLHGELQED 299

Query: 166 AYMTMP*G 143
            YMT+P G
Sbjct: 300 VYMTIPEG 307



 Score = 61.2 bits (147), Expect(2) = 2e-29
 Identities = 27/48 (56%), Positives = 38/48 (79%)
 Frame = -2

Query: 144 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTL 1
           V +  P+QVCKLLKS YG KQASR+WY+RL++LL+  G+ Q  +D++L
Sbjct: 308 VVAPKPNQVCKLLKSLYGLKQASRKWYERLTSLLVQQGYTQSTSDYSL 355


>gb|PNX58913.1| hypothetical protein L195_g059424, partial [Trifolium pratense]
          Length = 175

 Score = 94.4 bits (233), Expect(2) = 2e-29
 Identities = 45/68 (66%), Positives = 54/68 (79%)
 Frame = -1

Query: 346 ARLVTKGYIQTEGIDFFNTFSPVAKMATVRTLIDVAEIKGWHIHQLNVIYAFLHGKLK*D 167
           ARLV KGY Q EGIDFF TFSPVAK+ TVRTLI +A I+ WH+HQL+V  AFLHG L+ +
Sbjct: 15  ARLVAKGYTQVEGIDFFETFSPVAKITTVRTLIALAAIQSWHLHQLDVNNAFLHGXLQEE 74

Query: 166 AYMTMP*G 143
            YM++P G
Sbjct: 75  VYMSIPQG 82



 Score = 62.4 bits (150), Expect(2) = 2e-29
 Identities = 27/48 (56%), Positives = 38/48 (79%)
 Frame = -2

Query: 144 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTL 1
           V +S P+QVCKLLKS YG KQASR+WY++L+ +L+  G+ Q  +DH+L
Sbjct: 83  VTTSRPNQVCKLLKSLYGLKQASRKWYEKLTGVLLAQGYVQSSSDHSL 130


>gb|PNX93131.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 982

 Score = 91.7 bits (226), Expect(2) = 5e-29
 Identities = 43/68 (63%), Positives = 54/68 (79%)
 Frame = -1

Query: 346 ARLVTKGYIQTEGIDFFNTFSPVAKMATVRTLIDVAEIKGWHIHQLNVIYAFLHGKLK*D 167
           ARLV KGY Q EG+DFF+TFSPVAK+ TVR L+ +A IKGW +HQL+V  AFLHG L+ +
Sbjct: 513 ARLVAKGYNQVEGLDFFDTFSPVAKLTTVRMLLAIASIKGWFLHQLDVNNAFLHGDLQEN 572

Query: 166 AYMTMP*G 143
            YM++P G
Sbjct: 573 VYMSIPDG 580



 Score = 63.9 bits (154), Expect(2) = 5e-29
 Identities = 28/48 (58%), Positives = 38/48 (79%)
 Frame = -2

Query: 144 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTL 1
           V  S P+QVCKLLKS YG KQASR+WY++L++LL+  G+ Q  +DH+L
Sbjct: 581 VQCSKPNQVCKLLKSLYGLKQASRKWYEKLTSLLVKEGYTQSSSDHSL 628


>dbj|GAU49938.1| hypothetical protein TSUD_290950 [Trifolium subterraneum]
          Length = 1137

 Score = 93.6 bits (231), Expect(2) = 6e-29
 Identities = 45/68 (66%), Positives = 53/68 (77%)
 Frame = -1

Query: 346 ARLVTKGYIQTEGIDFFNTFSPVAKMATVRTLIDVAEIKGWHIHQLNVIYAFLHGKLK*D 167
           ARLV KGY Q EGIDFF+TFSPVAK+ TVR L+ +A IKGW +HQL+V  AFLHG L+ D
Sbjct: 762 ARLVAKGYTQIEGIDFFDTFSPVAKLTTVRLLLALASIKGWFLHQLDVNNAFLHGDLQED 821

Query: 166 AYMTMP*G 143
            YM +P G
Sbjct: 822 VYMVVPEG 829



 Score = 61.6 bits (148), Expect(2) = 6e-29
 Identities = 27/48 (56%), Positives = 37/48 (77%)
 Frame = -2

Query: 144 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTL 1
           VP   P+Q CKLLKS YG KQASR+WY++L++LL+  G+ Q  AD++L
Sbjct: 830 VPCVKPNQACKLLKSLYGLKQASRKWYEKLTSLLVREGYTQSTADYSL 877


>dbj|GAU36120.1| hypothetical protein TSUD_374830 [Trifolium subterraneum]
          Length = 1037

 Score = 92.0 bits (227), Expect(2) = 6e-29
 Identities = 43/68 (63%), Positives = 53/68 (77%)
 Frame = -1

Query: 346 ARLVTKGYIQTEGIDFFNTFSPVAKMATVRTLIDVAEIKGWHIHQLNVIYAFLHGKLK*D 167
           ARLV KGY Q EG+DFF+TFSPVAK+ TVR L+ +  IKGW +HQL+V  AFLHG L+ D
Sbjct: 562 ARLVAKGYNQVEGLDFFDTFSPVAKLTTVRMLLAITSIKGWFLHQLDVNNAFLHGDLQED 621

Query: 166 AYMTMP*G 143
            YM++P G
Sbjct: 622 VYMSIPDG 629



 Score = 63.2 bits (152), Expect(2) = 6e-29
 Identities = 28/48 (58%), Positives = 38/48 (79%)
 Frame = -2

Query: 144 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTL 1
           V  S P QVCKLLKS YG KQASR+WY++L++LL+  G+KQ  +D++L
Sbjct: 630 VSCSKPHQVCKLLKSLYGLKQASRKWYEKLTSLLVREGYKQSSSDYSL 677


>dbj|GAU46782.1| hypothetical protein TSUD_351810 [Trifolium subterraneum]
          Length = 1512

 Score = 91.3 bits (225), Expect(2) = 1e-28
 Identities = 43/68 (63%), Positives = 54/68 (79%)
 Frame = -1

Query: 346  ARLVTKGYIQTEGIDFFNTFSPVAKMATVRTLIDVAEIKGWHIHQLNVIYAFLHGKLK*D 167
            ARLV KGY Q EG+DFF+TFSPVAK+ TVRTLI +A I+ WH++Q++V  AFLHG L+ D
Sbjct: 1049 ARLVAKGYNQVEGLDFFDTFSPVAKITTVRTLIALASIRSWHLNQMDVNNAFLHGDLQED 1108

Query: 166  AYMTMP*G 143
             YM +P G
Sbjct: 1109 VYMEVPQG 1116



 Score = 63.2 bits (152), Expect(2) = 1e-28
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = -2

Query: 144  VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTL 1
            V S  P QVCKLLKS YG KQASR+WY++L++LL+  G+ Q  +DH+L
Sbjct: 1117 VNSPKPHQVCKLLKSLYGLKQASRKWYEKLTSLLLKEGYTQASSDHSL 1164


>gb|PNX92373.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 1125

 Score = 86.7 bits (213), Expect(2) = 1e-28
 Identities = 42/68 (61%), Positives = 51/68 (75%)
 Frame = -1

Query: 346 ARLVTKGYIQTEGIDFFNTFSPVAKMATVRTLIDVAEIKGWHIHQLNVIYAFLHGKLK*D 167
           ARLV KGY Q EG+D+F+TFSPVAK+ TVR +I +A I  W +HQL+V  AFLHG L+ D
Sbjct: 665 ARLVAKGYNQIEGLDYFDTFSPVAKLTTVRMVIALASIHNWFLHQLDVNNAFLHGDLQED 724

Query: 166 AYMTMP*G 143
            YMT P G
Sbjct: 725 VYMTPPPG 732



 Score = 67.8 bits (164), Expect(2) = 1e-28
 Identities = 28/46 (60%), Positives = 41/46 (89%)
 Frame = -2

Query: 138 SSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTL 1
           +++PS+VCKL+KS YG KQASRQWY +L++LL++ G+KQ H+DH+L
Sbjct: 734 TNNPSKVCKLVKSLYGLKQASRQWYAKLTSLLLSHGYKQAHSDHSL 779


>gb|PNX63688.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 272

 Score = 90.9 bits (224), Expect(2) = 2e-28
 Identities = 43/68 (63%), Positives = 53/68 (77%)
 Frame = -1

Query: 346 ARLVTKGYIQTEGIDFFNTFSPVAKMATVRTLIDVAEIKGWHIHQLNVIYAFLHGKLK*D 167
           ARLV KGY Q EG+DFF+TFSPVAK+ TVR L+ +A IKGW +HQL+V  AFLHG L+ +
Sbjct: 47  ARLVAKGYNQVEGLDFFDTFSPVAKLTTVRMLLAIASIKGWFLHQLDVNNAFLHGDLQEN 106

Query: 166 AYMTMP*G 143
            YM +P G
Sbjct: 107 VYMKIPDG 114



 Score = 62.4 bits (150), Expect(2) = 2e-28
 Identities = 27/48 (56%), Positives = 39/48 (81%)
 Frame = -2

Query: 144 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTL 1
           V  + P+QVCKLLKS YG KQASR+WY++L++LL+  G+KQ  +D++L
Sbjct: 115 VQCTKPNQVCKLLKSLYGLKQASRKWYEKLTSLLVREGYKQSTSDYSL 162


>gb|PNY00469.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 778

 Score = 91.7 bits (226), Expect(2) = 3e-28
 Identities = 42/68 (61%), Positives = 53/68 (77%)
 Frame = -1

Query: 346 ARLVTKGYIQTEGIDFFNTFSPVAKMATVRTLIDVAEIKGWHIHQLNVIYAFLHGKLK*D 167
           ARLV KGY Q EG+D+F+TFSPVAKM TVR L+ VA ++GWH+ QL+V  AFLHG L  +
Sbjct: 332 ARLVAKGYTQMEGVDYFDTFSPVAKMTTVRVLLAVAAVRGWHLEQLDVNNAFLHGDLHEE 391

Query: 166 AYMTMP*G 143
            YM++P G
Sbjct: 392 VYMSLPPG 399



 Score = 61.2 bits (147), Expect(2) = 3e-28
 Identities = 27/45 (60%), Positives = 36/45 (80%)
 Frame = -2

Query: 135 SSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTL 1
           ++PS+VCKL KS YG KQASRQWY +LS  L++LG++   ADH+L
Sbjct: 402 ATPSKVCKLNKSLYGLKQASRQWYSKLSAALISLGYQASQADHSL 446


>dbj|GAU39523.1| hypothetical protein TSUD_222930 [Trifolium subterraneum]
          Length = 1210

 Score = 90.5 bits (223), Expect(2) = 4e-28
 Identities = 43/68 (63%), Positives = 53/68 (77%)
 Frame = -1

Query: 346 ARLVTKGYIQTEGIDFFNTFSPVAKMATVRTLIDVAEIKGWHIHQLNVIYAFLHGKLK*D 167
           ARLV KGY Q EG+DF +TFSPVAK+ TVRTL+ +A IK WH+HQL+V  AFLHG+L  +
Sbjct: 758 ARLVAKGYNQIEGLDFIDTFSPVAKLTTVRTLLAIASIKHWHLHQLDVNNAFLHGELTEN 817

Query: 166 AYMTMP*G 143
            YM +P G
Sbjct: 818 VYMHIPDG 825



 Score = 62.0 bits (149), Expect(2) = 4e-28
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = -2

Query: 144 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTL 1
           V  S P QVCKLLKS YG KQASR WY++L++LL++ G+ Q  AD++L
Sbjct: 826 VVPSKPGQVCKLLKSLYGLKQASRMWYEKLTSLLIHEGYTQSSADYSL 873


>dbj|GAU34412.1| hypothetical protein TSUD_217520 [Trifolium subterraneum]
          Length = 932

 Score = 92.4 bits (228), Expect(2) = 4e-28
 Identities = 43/68 (63%), Positives = 52/68 (76%)
 Frame = -1

Query: 346 ARLVTKGYIQTEGIDFFNTFSPVAKMATVRTLIDVAEIKGWHIHQLNVIYAFLHGKLK*D 167
           ARLV KGY Q EG+DFF+TF PVAK+ TVRTL+ +  IK WH+HQL+V  AFLHG +  D
Sbjct: 583 ARLVAKGYNQVEGLDFFDTFFPVAKLTTVRTLLAITSIKQWHLHQLDVNNAFLHGDIAED 642

Query: 166 AYMTMP*G 143
            YMT+P G
Sbjct: 643 VYMTIPYG 650



 Score = 60.1 bits (144), Expect(2) = 4e-28
 Identities = 26/48 (54%), Positives = 37/48 (77%)
 Frame = -2

Query: 144 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTL 1
           +  S P QVCKLLKS YG KQASR WY++L++LL++ G+ Q  +D++L
Sbjct: 651 ISPSKPGQVCKLLKSLYGLKQASRMWYEKLTSLLLDEGYTQTTSDYSL 698