BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00030632
         (695 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU17063.1| hypothetical protein TSUD_105620 [Trifolium subt...   140   1e-39
dbj|GAU12283.1| hypothetical protein TSUD_141910 [Trifolium subt...   123   2e-39
gb|PNX92765.1| ribonuclease H [Trifolium pratense]                    133   4e-39
dbj|GAU10400.1| hypothetical protein TSUD_423410, partial [Trifo...   136   2e-38
dbj|GAU50297.1| hypothetical protein TSUD_288310 [Trifolium subt...   129   1e-37
dbj|GAU10666.1| hypothetical protein TSUD_425710, partial [Trifo...   133   1e-35
dbj|GAU34195.1| hypothetical protein TSUD_162960 [Trifolium subt...   132   4e-35
dbj|GAU47648.1| hypothetical protein TSUD_27720 [Trifolium subte...   137   2e-34
dbj|GAU16646.1| hypothetical protein TSUD_325960 [Trifolium subt...   129   2e-34
dbj|GAU27944.1| hypothetical protein TSUD_146590 [Trifolium subt...   129   9e-34
dbj|GAU35042.1| hypothetical protein TSUD_30080 [Trifolium subte...   117   2e-33
dbj|GAU23820.1| hypothetical protein TSUD_27290 [Trifolium subte...   126   5e-33
dbj|GAU33259.1| hypothetical protein TSUD_333820 [Trifolium subt...   117   7e-33
dbj|GAU31243.1| hypothetical protein TSUD_149290 [Trifolium subt...   124   3e-32
gb|PNX92714.1| ribonuclease H [Trifolium pratense]                    104   2e-29
dbj|GAU10804.1| hypothetical protein TSUD_425290, partial [Trifo...   115   1e-28
dbj|GAU51939.1| hypothetical protein TSUD_417210 [Trifolium subt...   115   2e-28
dbj|GAU35447.1| hypothetical protein TSUD_364030 [Trifolium subt...   100   3e-28
dbj|GAU48831.1| hypothetical protein TSUD_190610 [Trifolium subt...   115   8e-28
gb|PNX59215.1| ribonuclease H [Trifolium pratense]                    113   2e-27

>dbj|GAU17063.1| hypothetical protein TSUD_105620 [Trifolium subterraneum]
          Length = 440

 Score =  140 bits (354), Expect(2) = 1e-39
 Identities = 73/160 (45%), Positives = 98/160 (61%), Gaps = 3/160 (1%)
 Frame = +3

Query: 192 IENFAALIWNCFKAAVPNHASIRLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXXX 371
           IE++A L+  C+       A+ RLV W+     D+ILNVDGSS GNP             
Sbjct: 251 IEDYALLVKKCYSQQKSTLAN-RLVRWNAHDGTDMILNVDGSSIGNPEIYGFGGLIRNSH 309

Query: 372 XXWI---ASSIGHSNNIHAEFMALYNGLLFAWNRGYHLLICYSDSKNALDLISSATNSWN 542
             WI   A +IG SN +HAE +A+Y+GL+ AW+     LICYSDSK A+ LI    N W+
Sbjct: 310 GAWIRGFAGNIGFSNILHAELLAVYHGLVLAWDMDIKDLICYSDSKTAIKLIGDPINEWH 369

Query: 543 RYAPLIQSIQDILSWNWRAQLDHMLREGNVCADFLAKVGA 662
            +A ++Q+I+DIL+ +WR  + H LREGN CAD+LAK GA
Sbjct: 370 HFAAILQNIKDILARDWRVTVAHTLREGNACADYLAKFGA 409



 Score = 51.2 bits (121), Expect(2) = 1e-39
 Identities = 21/56 (37%), Positives = 29/56 (51%)
 Frame = +1

Query: 1   IWKSFGFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQENLS 168
           +WK+ GF    FF       W + G    +  +FLA +WW+WRARN   L  E +S
Sbjct: 188 LWKTIGFTDQTFFHGDNLYAWLRKGCDSPSMFMFLAALWWIWRARNKLCLANELVS 243


>dbj|GAU12283.1| hypothetical protein TSUD_141910 [Trifolium subterraneum]
          Length = 1049

 Score =  123 bits (309), Expect(2) = 2e-39
 Identities = 70/177 (39%), Positives = 99/177 (55%), Gaps = 6/177 (3%)
 Frame = +3

Query: 159  ESIVLLAQGHTIENFAALIWNCFKAAVPNH---ASIRLVSWHPTRDKDVILNVDGSSYGN 329
            ESI+  +    I ++A LI NC      NH   ++ +LV W+      +ILNVDGSS GN
Sbjct: 849  ESILFYSLKLRIMDYALLIENCHS----NHHDTSTSKLVKWNALGGTGMILNVDGSSLGN 904

Query: 330  PXXXXXXXXXXXXXXXWIAS---SIGHSNNIHAEFMALYNGLLFAWNRGYHLLICYSDSK 500
            P               W+     ++G +N +HAE  A+Y GLL AW+     L CYSDS+
Sbjct: 905  PGISGFGGLIHNADGAWVLGFFGNLGVNNILHAELRAIYKGLLLAWDLNIKDLWCYSDSE 964

Query: 501  NALDLISSATNSWNRYAPLIQSIQDILSWNWRAQLDHMLREGNVCADFLAKVGASGN 671
             A+ LIS + + W+ YA ++ +IQDIL  +W+  + H  REGN  AD+LAK GA+ N
Sbjct: 965  MAIKLISESVDQWHHYAAILNNIQDILRRDWQVLILHTFREGNAYADYLAKHGANNN 1021



 Score = 67.8 bits (164), Expect(2) = 2e-39
 Identities = 27/58 (46%), Positives = 38/58 (65%)
 Frame = +1

Query: 1   IWKSFGFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQENLSYY 174
           IWKS GF++  FF    P  W + G+H S+  LF+AT+WW+WRARN   L  E++ +Y
Sbjct: 797 IWKSIGFSNLNFFQGDDPYVWIRNGLHCSSMFLFMATIWWIWRARNALCLNSESILFY 854


>gb|PNX92765.1| ribonuclease H [Trifolium pratense]
          Length = 1310

 Score =  133 bits (334), Expect(2) = 4e-39
 Identities = 70/171 (40%), Positives = 99/171 (57%), Gaps = 3/171 (1%)
 Frame = +3

Query: 192  IENFAALIWNCFKAAVPNHASIRLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXXX 371
            +   A+LI +CF          R V+WHP+RD   +LNVDGS  G+              
Sbjct: 1119 VRKLASLILSCFSIVPSALKPPRWVTWHPSRDVGFVLNVDGSCLGDSGRAGFGGLIREGD 1178

Query: 372  XXWI---ASSIGHSNNIHAEFMALYNGLLFAWNRGYHLLICYSDSKNALDLISSATNSWN 542
              WI   +  +G SNN  AE MA+++GL  A  RGY  + CYSDS+  +D IS   NS++
Sbjct: 1179 GSWIIGFSGFLGISNNTFAELMAVFHGLKIARERGYRRIHCYSDSQTVVDAISKDLNSFH 1238

Query: 543  RYAPLIQSIQDILSWNWRAQLDHMLREGNVCADFLAKVGASGNCKLLVFDN 695
            RYA +I SI+D+L  +W  +L H LREGN  ADFLAK+G++ + KL  +++
Sbjct: 1239 RYAAVIASIKDLLQLDWEVRLSHSLREGNAGADFLAKIGSANDDKLTFWES 1289



 Score = 57.0 bits (136), Expect(2) = 4e-39
 Identities = 23/58 (39%), Positives = 37/58 (63%)
 Frame = +1

Query: 1    IWKSFGFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQENLSYY 174
            IW++ G+++ +FFS +    W K+  +G   +LFLA +WW WRARN   +G E++  Y
Sbjct: 1056 IWEALGYSNISFFSSNNLESWLKIHSYGPAANLFLAGLWWNWRARNIVCVGNESIHMY 1113


>dbj|GAU10400.1| hypothetical protein TSUD_423410, partial [Trifolium subterraneum]
          Length = 284

 Score =  136 bits (342), Expect(2) = 2e-38
 Identities = 72/171 (42%), Positives = 98/171 (57%), Gaps = 3/171 (1%)
 Frame = +3

Query: 192 IENFAALIWNCFKAAVPNHASIRLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXXX 371
           +    ALI  CF A V      R +SWHP +   V+LNVDGS  G+P             
Sbjct: 93  VSKLVALIVFCFPARVHTDTPRRWISWHPCKTDCVVLNVDGSCLGDPGRAGFGGLFRKGD 152

Query: 372 XXWI---ASSIGHSNNIHAEFMALYNGLLFAWNRGYHLLICYSDSKNALDLISSATNSWN 542
             WI   +  +G +N + AE MA+Y+GL  A   GY+ L CYSDSK  LDL+S   NS++
Sbjct: 153 GEWIRGFSGYLGVTNIMLAELMAVYHGLKIAREAGYNRLFCYSDSKTVLDLLSKERNSFH 212

Query: 543 RYAPLIQSIQDILSWNWRAQLDHMLREGNVCADFLAKVGASGNCKLLVFDN 695
            YA +I +IQD+L   W   L H LREGN CADFLAK+G++ + K  ++++
Sbjct: 213 CYAAIIANIQDLLVLEWDVSLKHSLREGNFCADFLAKLGSANDEKFFIWES 263



 Score = 52.0 bits (123), Expect(2) = 2e-38
 Identities = 24/55 (43%), Positives = 31/55 (56%)
 Frame = +1

Query: 1   IWKSFGFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQENL 165
           IW S GF +S+FFS S    W +    G N   FLA +WW WRARN   +G  ++
Sbjct: 30  IWNSLGFQNSSFFSCSDLELWLRNNSIGLNAPTFLAGLWWNWRARNIFCVGNASI 84


>dbj|GAU50297.1| hypothetical protein TSUD_288310 [Trifolium subterraneum]
          Length = 545

 Score =  129 bits (325), Expect(2) = 1e-37
 Identities = 73/160 (45%), Positives = 93/160 (58%), Gaps = 4/160 (2%)
 Frame = +3

Query: 195 ENFAALIWNCF-KAAVPNHASIRLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXXX 371
           EN A L+  CF K  + + A+  +V W+      +ILNVDGSS GNP             
Sbjct: 357 ENLAQLLRMCFIKQNISSTAT--MVRWNAHGGIGMILNVDGSSIGNPGISGFGGLIRNSD 414

Query: 372 XXWI---ASSIGHSNNIHAEFMALYNGLLFAWNRGYHLLICYSDSKNALDLISSATNSWN 542
             W+   A +IGH N + AE +A+Y+GL+ AW      L CYSDSK AL LI    N W+
Sbjct: 415 GAWVHGFAGNIGHLNILQAELLAIYHGLVLAWELDIKDLCCYSDSKTALKLIYDHVNEWH 474

Query: 543 RYAPLIQSIQDILSWNWRAQLDHMLREGNVCADFLAKVGA 662
           +YA +I +I+D LS NWR +L HMLREGN CAD L K GA
Sbjct: 475 QYAAIIYNIKDFLSRNWRVRLVHMLREGNNCADILDKFGA 514



 Score = 55.8 bits (133), Expect(2) = 1e-37
 Identities = 23/57 (40%), Positives = 31/57 (54%)
 Frame = +1

Query: 4   WKSFGFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQENLSYY 174
           WK+ GF    FF      DW +  I G +  LF+A VWW+W ARN   +  E +SY+
Sbjct: 294 WKAIGFLGQTFFQGDNLNDWLRNSIDGPSSFLFMAAVWWIWCARNQLCMDNEAISYF 350


>dbj|GAU10666.1| hypothetical protein TSUD_425710, partial [Trifolium subterraneum]
          Length = 157

 Score =  133 bits (334), Expect = 1e-35
 Identities = 69/137 (50%), Positives = 84/137 (61%), Gaps = 3/137 (2%)
 Frame = +3

Query: 261 LVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXXXXXWI---ASSIGHSNNIHAEFMA 431
           +V W+      +ILNVDGSS GNP               W+   A +IGHSN +HAE +A
Sbjct: 1   MVRWNAHGGIRMILNVDGSSIGNPGISGFGGLIRNSDRAWVHGFAGNIGHSNILHAELLA 60

Query: 432 LYNGLLFAWNRGYHLLICYSDSKNALDLISSATNSWNRYAPLIQSIQDILSWNWRAQLDH 611
           +Y+GL+ AW      L CYSDSK AL LI    N W+ YA +I +I+DILS NWR +L H
Sbjct: 61  IYHGLVLAWELDIKDLYCYSDSKTALKLIYDHVNEWHHYAAIIYNIKDILSRNWRVRLVH 120

Query: 612 MLREGNVCADFLAKVGA 662
            LREGN CADFLAK GA
Sbjct: 121 TLREGNNCADFLAKFGA 137


>dbj|GAU34195.1| hypothetical protein TSUD_162960 [Trifolium subterraneum]
          Length = 168

 Score =  132 bits (331), Expect = 4e-35
 Identities = 68/137 (49%), Positives = 83/137 (60%), Gaps = 3/137 (2%)
 Frame = +3

Query: 261 LVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXXXXXWI---ASSIGHSNNIHAEFMA 431
           +V W+      +ILNVDGSS GNP               W+   A +IGHSN +HAE +A
Sbjct: 1   MVRWNAHGGIGMILNVDGSSIGNPGISGFGGLIRNSDGAWVHGFAGNIGHSNILHAELLA 60

Query: 432 LYNGLLFAWNRGYHLLICYSDSKNALDLISSATNSWNRYAPLIQSIQDILSWNWRAQLDH 611
           +Y+GL+ AW      L CYSDSK AL LI    N W+ YA +I +I+D LS NWR +L H
Sbjct: 61  IYHGLVLAWELDIKDLCCYSDSKTALKLIYDHVNEWHHYAAIIYNIKDFLSRNWRVRLVH 120

Query: 612 MLREGNVCADFLAKVGA 662
            LREGN CADFLAK GA
Sbjct: 121 TLREGNNCADFLAKFGA 137


>dbj|GAU47648.1| hypothetical protein TSUD_27720 [Trifolium subterraneum]
          Length = 521

 Score =  137 bits (344), Expect(2) = 2e-34
 Identities = 75/182 (41%), Positives = 102/182 (56%), Gaps = 3/182 (1%)
 Frame = +3

Query: 159 ESIVLLAQGHTIENFAALIWNCFKAAVPNHASIRLVSWHPTRDKDVILNVDGSSYGNPXX 338
           ESI  ++    IE++A L+  C    +   ++ +LV W+     D+ILNVDGSS GNP  
Sbjct: 321 ESISQVSLRMRIEDYAHLLRACLFNQI-TMSNTKLVKWNALGSPDMILNVDGSSIGNPGV 379

Query: 339 XXXXXXXXXXXXXW---IASSIGHSNNIHAEFMALYNGLLFAWNRGYHLLICYSDSKNAL 509
                        W      +IG SN +HAE MALY+GLL AW      L CYSDS+ A+
Sbjct: 380 SGFGGLIHNSKGAWAHGFVGNIGFSNILHAELMALYHGLLLAWQLNIKELWCYSDSETAI 439

Query: 510 DLISSATNSWNRYAPLIQSIQDILSWNWRAQLDHMLREGNVCADFLAKVGASGNCKLLVF 689
            LI+   + W+ YA ++ +I+DIL+  WR  + H  REGN CAD+LAK+GA  N  L V 
Sbjct: 440 KLITEPVDEWHHYAAILLNIKDILAREWRVNIAHTFREGNACADYLAKLGACNNEALSVM 499

Query: 690 DN 695
            N
Sbjct: 500 TN 501



 Score = 37.7 bits (86), Expect(2) = 2e-34
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +1

Query: 22  NSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQENLS 168
           N S FF       W   G+   +  LF A +WW+W  RN   +  E++S
Sbjct: 276 NKSIFFEDDEFYVWLWNGLDSPSKLLFTAAIWWIWCTRNNLCMNNESIS 324


>dbj|GAU16646.1| hypothetical protein TSUD_325960 [Trifolium subterraneum]
          Length = 157

 Score =  129 bits (325), Expect = 2e-34
 Identities = 67/126 (53%), Positives = 79/126 (62%), Gaps = 3/126 (2%)
 Frame = +3

Query: 294 VILNVDGSSYGNPXXXXXXXXXXXXXXXWI---ASSIGHSNNIHAEFMALYNGLLFAWNR 464
           +ILNVDGSS GNP               WI   A +IGHSN +HAE +A+Y+GL+ AW  
Sbjct: 1   MILNVDGSSIGNPGISGFGGLIRNSDGAWIHGFAGNIGHSNILHAELLAIYHGLVLAWEL 60

Query: 465 GYHLLICYSDSKNALDLISSATNSWNRYAPLIQSIQDILSWNWRAQLDHMLREGNVCADF 644
               L CYSDSK AL LI    N W+ YA +I +I+D LS NWR +L H LREGN CADF
Sbjct: 61  DIKDLCCYSDSKTALKLIYDHVNEWHHYAAIIYNIKDFLSRNWRVRLVHTLREGNNCADF 120

Query: 645 LAKVGA 662
           LAK GA
Sbjct: 121 LAKFGA 126


>dbj|GAU27944.1| hypothetical protein TSUD_146590 [Trifolium subterraneum]
          Length = 204

 Score =  129 bits (325), Expect = 9e-34
 Identities = 69/159 (43%), Positives = 92/159 (57%), Gaps = 3/159 (1%)
 Frame = +3

Query: 195 ENFAALIWNCFKAAVPNHASIRLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXXXX 374
           EN A L+  CF     +  +  +V W+      +ILNVDGSS GNP              
Sbjct: 16  ENLAQLLRMCFLKRNISPTTT-MVCWNAHGSIGIILNVDGSSIGNPGISGFGGLIRNSDG 74

Query: 375 XWI---ASSIGHSNNIHAEFMALYNGLLFAWNRGYHLLICYSDSKNALDLISSATNSWNR 545
            W+   A +IG SN  HAE +A+Y+GL+ AW      L CYSDSK A+ L+S   N W++
Sbjct: 75  AWVHGFAENIGFSNIFHAELLAVYHGLVLAWELNIKDLWCYSDSKTAIKLLSDHVNEWHQ 134

Query: 546 YAPLIQSIQDILSWNWRAQLDHMLREGNVCADFLAKVGA 662
           YA +I +I+D+ + NWR +L H LR+GN CADFLAK GA
Sbjct: 135 YAAIIYNIKDLFTRNWRVRLMHTLRKGNTCADFLAKFGA 173


>dbj|GAU35042.1| hypothetical protein TSUD_30080 [Trifolium subterraneum]
          Length = 724

 Score =  117 bits (294), Expect(2) = 2e-33
 Identities = 64/166 (38%), Positives = 91/166 (54%), Gaps = 6/166 (3%)
 Frame = +3

Query: 192  IENFAALIWNCFKAAVPNHASI---RLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXX 362
            I ++A L+ NC      NH      ++V W+      +ILNVDGS+ GNP          
Sbjct: 535  IVDYALLLKNCHF----NHQVTTLPKIVRWNALGGTSMILNVDGSTIGNPGISGFGGLIR 590

Query: 363  XXXXXWIAS---SIGHSNNIHAEFMALYNGLLFAWNRGYHLLICYSDSKNALDLISSATN 533
                 WI     ++G +N +HAE MA+  GLL AW      L+CYSDS  A+ LI+   +
Sbjct: 591  NADGAWIHGFFGNLGVTNILHAELMAILKGLLLAWELNIKDLLCYSDSATAIKLITEPVD 650

Query: 534  SWNRYAPLIQSIQDILSWNWRAQLDHMLREGNVCADFLAKVGASGN 671
             W+ YA ++ +I+DIL+ +W+  + H  REGN CAD+LAK GA  N
Sbjct: 651  VWHHYAAILNNIKDILNRDWQVSIFHTFREGNACADYLAKHGAHNN 696



 Score = 53.5 bits (127), Expect(2) = 2e-33
 Identities = 22/53 (41%), Positives = 28/53 (52%)
 Frame = +1

Query: 1   IWKSFGFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQE 159
           IWKS GF    FF       W + G+  S+  LF+A +WW+WR RN   L  E
Sbjct: 472 IWKSLGFTDRNFFQEVDSSSWLRNGLSCSSMFLFMAAIWWIWRTRNALCLDNE 524


>dbj|GAU23820.1| hypothetical protein TSUD_27290 [Trifolium subterraneum]
          Length = 168

 Score =  126 bits (317), Expect = 5e-33
 Identities = 62/137 (45%), Positives = 84/137 (61%), Gaps = 3/137 (2%)
 Frame = +3

Query: 261 LVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXXXXXWI---ASSIGHSNNIHAEFMA 431
           ++ W+      +ILNVDGSS GNP               W+   A +IG SN +HAE +A
Sbjct: 1   MIRWNAHGGIGMILNVDGSSIGNPGISGFGGLIRNSDGTWVHGFAGNIGFSNILHAELLA 60

Query: 432 LYNGLLFAWNRGYHLLICYSDSKNALDLISSATNSWNRYAPLIQSIQDILSWNWRAQLDH 611
           +Y+GL+  W      L CYSDS+ A+ L+S+  N W+ YA +I +I+D+L+ NWR +L H
Sbjct: 61  VYHGLVLVWELNIKDLWCYSDSRTAIKLLSNHVNEWHHYAAIIYNIKDLLTRNWRVKLMH 120

Query: 612 MLREGNVCADFLAKVGA 662
            LREGN CADFLAK GA
Sbjct: 121 TLREGNTCADFLAKFGA 137


>dbj|GAU33259.1| hypothetical protein TSUD_333820 [Trifolium subterraneum]
          Length = 284

 Score =  117 bits (292), Expect(2) = 7e-33
 Identities = 68/171 (39%), Positives = 94/171 (54%), Gaps = 3/171 (1%)
 Frame = +3

Query: 192 IENFAALIWNCFKAAVPNHASIRLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXXX 371
           +    ALI +CF A V      R  +    +   V+LNVDGS  G+P             
Sbjct: 99  VSKLVALIVSCFPAWV------RTDTPRVCKTDCVVLNVDGSCLGDPGRAGFGGLFRKGD 152

Query: 372 XXWIASSIGH---SNNIHAEFMALYNGLLFAWNRGYHLLICYSDSKNALDLISSATNSWN 542
             WI  S G+   +N   AE MA+Y+GL  A   GY+ L CYSDSK  LDL+S   NS++
Sbjct: 153 GEWIRGSSGYLGVTNITLAELMAVYHGLKIAREAGYNRLFCYSDSKTVLDLLSKERNSFH 212

Query: 543 RYAPLIQSIQDILSWNWRAQLDHMLREGNVCADFLAKVGASGNCKLLVFDN 695
            YA +I +IQD+L   W   L H +REGN CADFLAK+G++ + K  ++++
Sbjct: 213 CYAAIIANIQDLLVLEWDVSLKHSVREGNFCADFLAKLGSANDEKFSIWES 263



 Score = 52.4 bits (124), Expect(2) = 7e-33
 Identities = 24/55 (43%), Positives = 31/55 (56%)
 Frame = +1

Query: 1   IWKSFGFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQENL 165
           IW S GF +S+FFS S    W +    G N   FLA +WW WRARN   +G  ++
Sbjct: 36  IWNSLGFQNSSFFSCSDLELWLRNNSIGLNAPTFLAGLWWNWRARNICCVGNASI 90


>dbj|GAU31243.1| hypothetical protein TSUD_149290 [Trifolium subterraneum]
          Length = 168

 Score =  124 bits (312), Expect = 3e-32
 Identities = 63/137 (45%), Positives = 82/137 (59%), Gaps = 3/137 (2%)
 Frame = +3

Query: 261 LVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXXXXXWI---ASSIGHSNNIHAEFMA 431
           +V W+      +ILNVDGSS GNP               W+     +IGHSN +HAE +A
Sbjct: 1   MVRWNAHGGIGMILNVDGSSIGNPGISGFGGLIRNSDGAWVHGFVGNIGHSNILHAELLA 60

Query: 432 LYNGLLFAWNRGYHLLICYSDSKNALDLISSATNSWNRYAPLIQSIQDILSWNWRAQLDH 611
           +Y+GL+ AW      L CYSDSK A+ L+S   N W++YA +I +I++ LS NWR +L H
Sbjct: 61  IYHGLVLAWELDIKDLCCYSDSKTAIKLLSDHVNEWHQYAAIIYNIKNFLSRNWRVRLVH 120

Query: 612 MLREGNVCADFLAKVGA 662
            LREGN C  FLAK GA
Sbjct: 121 TLREGNNCTYFLAKFGA 137


>gb|PNX92714.1| ribonuclease H [Trifolium pratense]
          Length = 1359

 Score =  104 bits (259), Expect(2) = 2e-29
 Identities = 61/163 (37%), Positives = 89/163 (54%), Gaps = 4/163 (2%)
 Frame = +3

Query: 210  LIWNCFKAAVPNHASIRLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXXXXXWIAS 389
            L  +CF            V W+ +    +ILNVDGS  G P               WI+ 
Sbjct: 1173 LFSSCFSTNSSGTLVDHFVKWNASNMTCIILNVDGSCLGTPCRAGFGGVLRNSNGAWISG 1232

Query: 390  S----IGHSNNIHAEFMALYNGLLFAWNRGYHLLICYSDSKNALDLISSATNSWNRYAPL 557
                  G ++ ++AE +A+Y+GL  A + G+  + CYSDS N+L LI ++T  ++ YA L
Sbjct: 1233 FSGFIAGSTDILYAELLAIYHGLSLAKDLGHDHVACYSDSLNSLSLIQNSTPRFHIYAVL 1292

Query: 558  IQSIQDILSWNWRAQLDHMLREGNVCADFLAKVGASGNCKLLV 686
            IQ+I+D+L       L H LREGN CADF+AK+GAS + ++LV
Sbjct: 1293 IQNIKDLLLDLGTVTLIHSLREGNSCADFMAKLGASSDVEVLV 1335



 Score = 53.5 bits (127), Expect(2) = 2e-29
 Identities = 21/58 (36%), Positives = 33/58 (56%)
 Frame = +1

Query: 1    IWKSFGFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQENLSYY 174
            +W S GF++  F+  +  + W K G  GS+ ++F A VWW WR RN+     E++  Y
Sbjct: 1104 LWFSIGFSAPQFYDTTDNISWIKEGTSGSSLNIFAAGVWWAWRNRNSMCFTNEHIPQY 1161


>dbj|GAU10804.1| hypothetical protein TSUD_425290, partial [Trifolium subterraneum]
          Length = 174

 Score =  115 bits (288), Expect = 1e-28
 Identities = 58/141 (41%), Positives = 80/141 (56%), Gaps = 3/141 (2%)
 Frame = +3

Query: 258 RLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXXXXXWIAS---SIGHSNNIHAEFM 428
           ++V W+      +ILNVDGSS GNP               WI     ++G +N +HAE M
Sbjct: 6   KIVRWNGLGGTSMILNVDGSSIGNPGISGFGGLIRNAYGAWIHGFFGNLGVTNILHAELM 65

Query: 429 ALYNGLLFAWNRGYHLLICYSDSKNALDLISSATNSWNRYAPLIQSIQDILSWNWRAQLD 608
           A+  GLL AW      L CYSDS  A+ LI+   + W+ YA ++ +I+DIL+ +W+  + 
Sbjct: 66  AILKGLLIAWELNIKDLSCYSDSATAIKLITEPVDVWHHYAAILNNIKDILNRDWQVSIF 125

Query: 609 HMLREGNVCADFLAKVGASGN 671
           H  REGN CAD+LAK GA  N
Sbjct: 126 HTFREGNACADYLAKHGAHNN 146


>dbj|GAU51939.1| hypothetical protein TSUD_417210 [Trifolium subterraneum]
          Length = 181

 Score =  115 bits (288), Expect = 2e-28
 Identities = 58/141 (41%), Positives = 79/141 (56%), Gaps = 3/141 (2%)
 Frame = +3

Query: 258 RLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXXXXXWIAS---SIGHSNNIHAEFM 428
           ++V W+      +ILNVDGSS GNP               WI     ++G +N +HAE M
Sbjct: 13  KIVRWNALGGTSMILNVDGSSIGNPGISGFGGLIRNAYGAWIHGFFGNLGVTNILHAELM 72

Query: 429 ALYNGLLFAWNRGYHLLICYSDSKNALDLISSATNSWNRYAPLIQSIQDILSWNWRAQLD 608
            +  GLL AW      L CYSDS  A+ LI+   + W+ YA ++ SI+DIL+ +W+  + 
Sbjct: 73  VILKGLLLAWELNIKDLSCYSDSATAIKLITEPVDVWHHYAAILNSIKDILNRDWQVSIF 132

Query: 609 HMLREGNVCADFLAKVGASGN 671
           H  REGN CAD+LAK GA  N
Sbjct: 133 HTFREGNACADYLAKHGAHNN 153


>dbj|GAU35447.1| hypothetical protein TSUD_364030 [Trifolium subterraneum]
          Length = 526

 Score =  100 bits (248), Expect(2) = 3e-28
 Identities = 59/163 (36%), Positives = 82/163 (50%), Gaps = 3/163 (1%)
 Frame = +3

Query: 192 IENFAALIWNCFKAAVPNHASI---RLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXX 362
           I ++A L+ NC      NH      ++V W+  R   +ILNVDGSS              
Sbjct: 365 IVDYALLLKNCHF----NHQVTTLPKIVRWNALRGTSMILNVDGSSIV------------ 408

Query: 363 XXXXXWIASSIGHSNNIHAEFMALYNGLLFAWNRGYHLLICYSDSKNALDLISSATNSWN 542
                        +N +HAE MA+  GLL AW      L CYSDS   + LI+   + W+
Sbjct: 409 -------------TNILHAELMAILKGLLLAWELNIKDLSCYSDSATTIKLITEPVDVWH 455

Query: 543 RYAPLIQSIQDILSWNWRAQLDHMLREGNVCADFLAKVGASGN 671
            YA ++ +I+DIL+ +W+  + H  REGN CAD+LAK GA  N
Sbjct: 456 HYAAILNNIKDILNRDWQVSIFHTFREGNACADYLAKHGAHNN 498



 Score = 53.9 bits (128), Expect(2) = 3e-28
 Identities = 22/53 (41%), Positives = 28/53 (52%)
 Frame = +1

Query: 1   IWKSFGFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQE 159
           IWKS GF    FF       W + G+  S+  LF+A +WW+WR RN   L  E
Sbjct: 302 IWKSLGFTDQNFFQEVDSSSWLRNGLSCSSMFLFMAAIWWIWRTRNALCLDNE 354


>dbj|GAU48831.1| hypothetical protein TSUD_190610 [Trifolium subterraneum]
          Length = 259

 Score =  115 bits (289), Expect = 8e-28
 Identities = 62/139 (44%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
 Frame = +3

Query: 258 RLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXXXXXWI---ASSIGHSNNIHAEFM 428
           RLVSWHP  +  + +NVDGSS GN                WI   A S G ++NI+AE  
Sbjct: 90  RLVSWHPPPENVIKVNVDGSSIGNQGPSGFGGLLRKTFGGWITGFAGSCGFTSNINAELQ 149

Query: 429 ALYNGLLFAWNRGYHLLICYSDSKNALDLISSATNSWNRYAPLIQSIQDILSWNWRAQLD 608
            + +GL  AWN G+  +IC SDS+ AL LI     S + YAPL+  IQ ++   W+  L 
Sbjct: 150 VILHGLDIAWNHGFRNVICESDSQTALKLIQEGVPSTHPYAPLVNYIQSLIHKEWKLFLV 209

Query: 609 HMLREGNVCADFLAKVGAS 665
           H LREGN  AD+LAK+GAS
Sbjct: 210 HTLREGNASADWLAKLGAS 228


>gb|PNX59215.1| ribonuclease H [Trifolium pratense]
          Length = 209

 Score =  113 bits (283), Expect = 2e-27
 Identities = 64/162 (39%), Positives = 92/162 (56%), Gaps = 5/162 (3%)
 Frame = +3

Query: 195 ENFAALIWNCF--KAAVPNHASIRLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXX 368
           EN+A L++ CF  +A +P    +R   W+  R   +ILNVDG S  N             
Sbjct: 21  ENYAHLLFKCFFKQATIPETKWVR---WNAHRGSGMILNVDGGSLRNLGISGFGGLIRNN 77

Query: 369 XXXWI---ASSIGHSNNIHAEFMALYNGLLFAWNRGYHLLICYSDSKNALDLISSATNSW 539
              WI   A +IG SN +HA+ +A+Y GL+ AW  G   L CYSDSK A+ LIS + N+W
Sbjct: 78  DDMWIHGFAGNIGFSNILHAKLLAIYYGLVMAWEFGITELWCYSDSKVAIKLISESVNAW 137

Query: 540 NRYAPLIQSIQDILSWNWRAQLDHMLREGNVCADFLAKVGAS 665
           + YA ++ +I++ L+ + R  +    RE N CAD+LAK GA+
Sbjct: 138 HHYAVILYNIKEYLARDRRIHIVDTFREDNACADYLAKFGAA 179