BLASTX nr result

ID: Astragalus23_contig00029591 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00029591
         (630 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU33333.1| hypothetical protein TSUD_165980 [Trifolium subt...    63   6e-08
gb|PNY06305.1| pentatricopeptide repeat-containing protein [Trif...    61   2e-07
ref|XP_012569571.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
ref|XP_012569570.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
ref|XP_012569569.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
ref|XP_012569568.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
ref|XP_004494545.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06

>dbj|GAU33333.1| hypothetical protein TSUD_165980 [Trifolium subterraneum]
          Length = 501

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 42/90 (46%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
 Frame = -3

Query: 256 MRSIYRAVIRDPS*ICYQTLASRNLFSSLACCHLTGARLLAYRTISRPYKYC*YCKNWQR 77
           M+SIYRAV+RDPS I    LASR LFSSLA CH    R   +R  S+           + 
Sbjct: 1   MQSIYRAVVRDPSCIFCLPLASRTLFSSLATCHDAEGRDFRHREQSQDLTRSVDILTAKI 60

Query: 76  RQGGRHSSIY-----DETLEGIHLSQNLIN 2
            +G     I      DET+ GIHLSQNLIN
Sbjct: 61  GKGNSEEDILQTLISDETVSGIHLSQNLIN 90


>gb|PNY06305.1| pentatricopeptide repeat-containing protein [Trifolium pratense]
          Length = 537

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 41/90 (45%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
 Frame = -3

Query: 256 MRSIYRAVIRDPS*ICYQTLASRNLFSSLACCHLTGARLLAYRTISRPYKYC*YCKNWQR 77
           M+SIYRAV+ DPS IC   LASR LFSSLA CH    R   +R  S+           + 
Sbjct: 92  MQSIYRAVVHDPSCICCLPLASRTLFSSLATCHDAEGREFPHREQSQDLTRSVDILTAKI 151

Query: 76  RQGGR-----HSSIYDETLEGIHLSQNLIN 2
            +G        S I DE + GIH SQNLIN
Sbjct: 152 GKGNSEEDILRSLISDEAVNGIHPSQNLIN 181


>ref|XP_012569571.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial isoform X5 [Cicer arietinum]
          Length = 407

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 38/89 (42%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
 Frame = -3

Query: 253 RSIYRAVIRDPS*ICYQTLASRNLFSSLACCHLTGARLLAYRTISRPYKYC*YCKNWQRR 74
           +SIYRAV+RDPS ICY   +SR LFSSL+ CH   AR   ++  S+           +  
Sbjct: 14  KSIYRAVVRDPSCICYLVYSSRTLFSSLSNCHHAEAREFWHKEQSQDLTRSVDILTAKIG 73

Query: 73  QGGR-----HSSIYDETLEGIHLSQNLIN 2
           +G        S I DE +  IH SQNLIN
Sbjct: 74  KGNSEEDILQSLISDEAVTDIHPSQNLIN 102


>ref|XP_012569570.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial isoform X4 [Cicer arietinum]
          Length = 441

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 38/89 (42%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
 Frame = -3

Query: 253 RSIYRAVIRDPS*ICYQTLASRNLFSSLACCHLTGARLLAYRTISRPYKYC*YCKNWQRR 74
           +SIYRAV+RDPS ICY   +SR LFSSL+ CH   AR   ++  S+           +  
Sbjct: 14  KSIYRAVVRDPSCICYLVYSSRTLFSSLSNCHHAEAREFWHKEQSQDLTRSVDILTAKIG 73

Query: 73  QGGR-----HSSIYDETLEGIHLSQNLIN 2
           +G        S I DE +  IH SQNLIN
Sbjct: 74  KGNSEEDILQSLISDEAVTDIHPSQNLIN 102


>ref|XP_012569569.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial isoform X3 [Cicer arietinum]
          Length = 458

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 38/89 (42%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
 Frame = -3

Query: 253 RSIYRAVIRDPS*ICYQTLASRNLFSSLACCHLTGARLLAYRTISRPYKYC*YCKNWQRR 74
           +SIYRAV+RDPS ICY   +SR LFSSL+ CH   AR   ++  S+           +  
Sbjct: 14  KSIYRAVVRDPSCICYLVYSSRTLFSSLSNCHHAEAREFWHKEQSQDLTRSVDILTAKIG 73

Query: 73  QGGR-----HSSIYDETLEGIHLSQNLIN 2
           +G        S I DE +  IH SQNLIN
Sbjct: 74  KGNSEEDILQSLISDEAVTDIHPSQNLIN 102


>ref|XP_012569568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial isoform X2 [Cicer arietinum]
          Length = 486

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 38/89 (42%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
 Frame = -3

Query: 253 RSIYRAVIRDPS*ICYQTLASRNLFSSLACCHLTGARLLAYRTISRPYKYC*YCKNWQRR 74
           +SIYRAV+RDPS ICY   +SR LFSSL+ CH   AR   ++  S+           +  
Sbjct: 14  KSIYRAVVRDPSCICYLVYSSRTLFSSLSNCHHAEAREFWHKEQSQDLTRSVDILTAKIG 73

Query: 73  QGGR-----HSSIYDETLEGIHLSQNLIN 2
           +G        S I DE +  IH SQNLIN
Sbjct: 74  KGNSEEDILQSLISDEAVTDIHPSQNLIN 102


>ref|XP_004494545.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial isoform X1 [Cicer arietinum]
 ref|XP_004494546.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial isoform X1 [Cicer arietinum]
          Length = 513

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 38/89 (42%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
 Frame = -3

Query: 253 RSIYRAVIRDPS*ICYQTLASRNLFSSLACCHLTGARLLAYRTISRPYKYC*YCKNWQRR 74
           +SIYRAV+RDPS ICY   +SR LFSSL+ CH   AR   ++  S+           +  
Sbjct: 14  KSIYRAVVRDPSCICYLVYSSRTLFSSLSNCHHAEAREFWHKEQSQDLTRSVDILTAKIG 73

Query: 73  QGGR-----HSSIYDETLEGIHLSQNLIN 2
           +G        S I DE +  IH SQNLIN
Sbjct: 74  KGNSEEDILQSLISDEAVTDIHPSQNLIN 102


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