BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00028233
         (653 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX73358.1| copia-type polyprotein, partial [Trifolium pratense]   262   1e-84
dbj|GAU13002.1| hypothetical protein TSUD_173010 [Trifolium subt...   281   1e-84
dbj|GAU23361.1| hypothetical protein TSUD_334080 [Trifolium subt...   281   6e-84
gb|PNX86749.1| copia-type polyprotein [Trifolium pratense]            260   1e-82
gb|PRQ33949.1| putative RNA-directed DNA polymerase [Rosa chinen...   261   1e-82
gb|PNX80439.1| copia-type polyprotein [Trifolium pratense]            256   5e-82
gb|PNX81877.1| hypothetical protein L195_g037902, partial [Trifo...   264   5e-82
gb|PNX95204.1| copia-type polyprotein [Trifolium pratense]            275   5e-82
gb|PNX55944.1| putative LRR receptor-like protein kinase, partia...   257   9e-82
dbj|GAU31929.1| hypothetical protein TSUD_271130, partial [Trifo...   261   4e-81
gb|PNX87899.1| putative LRR receptor-like protein kinase, partia...   255   6e-81
dbj|GAU29997.1| hypothetical protein TSUD_160820 [Trifolium subt...   272   6e-81
gb|PRQ42077.1| putative RNA-directed DNA polymerase [Rosa chinen...   270   7e-81
gb|PNY15642.1| copia-type polyprotein [Trifolium pratense]            266   1e-80
gb|PRQ52345.1| putative RNA-directed DNA polymerase [Rosa chinen...   271   2e-80
ref|XP_015582183.1| PREDICTED: uncharacterized mitochondrial pro...   254   2e-80
ref|XP_018816630.1| PREDICTED: uncharacterized protein LOC108988...   253   3e-80
gb|KYP57482.1| Retrovirus-related Pol polyprotein from transposo...   252   1e-79
dbj|GAU44848.1| hypothetical protein TSUD_112220 [Trifolium subt...   268   2e-79
gb|PRQ38020.1| putative RNA-directed DNA polymerase [Rosa chinen...   258   2e-79

>gb|PNX73358.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 294

 Score =  262 bits (669), Expect = 1e-84
 Identities = 132/239 (55%), Positives = 163/239 (68%), Gaps = 23/239 (9%)
 Frame = +2

Query: 2   LYVDDLIYTGNDEKLCNDFKESMKREFDMSDLGKMKFFLGVEVNQTDAGIFIYQRKYAKE 181
           LYVDDLIYTGND+++  +FK SMK++F M+DLGKMK+FLGVEVNQT  GIFI Q+KYA E
Sbjct: 12  LYVDDLIYTGNDKQMMEEFKSSMKKKFAMTDLGKMKYFLGVEVNQTQQGIFINQQKYASE 71

Query: 182 VLERFGMENSKMVTNPIVPGCKLTRDSDGKAVDVTTYKQMIGCLMYLTVTRPDLMYSVCL 361
           +L RFGM++   V  PIV GCKL +D +GK  D T+YKQMIGCLMYL  TRPDL YSVCL
Sbjct: 72  ILTRFGMQDCNTVCTPIVLGCKLVKDENGKPADATSYKQMIGCLMYLLETRPDLTYSVCL 131

Query: 362 TSRYMERPTEAHLAAVKRTLRYIKGTINLGILYSKLNAKKQCTEELTGFTDSDYAGDADD 541
            +RYM++PTE H+ AVKR +RY+KGT++ GILY   + +      L G+TDSDYA D DD
Sbjct: 132 AARYMDKPTEMHVIAVKRIMRYLKGTMSYGILYKSTDGE---NVTLVGWTDSDYARDYDD 188

Query: 542 RRSTSVYVFMMSN-----------------------AAVACGCQGVWLRRILDQLGMNQ 649
           R+STS YVF +                         AA +  CQG+WLR +L QL   Q
Sbjct: 189 RKSTSGYVFSIGTSAISWSSKKQPIVTLSTTEAEFIAAASSACQGIWLRNVLKQLRQEQ 247


>dbj|GAU13002.1| hypothetical protein TSUD_173010 [Trifolium subterraneum]
          Length = 1126

 Score =  281 bits (719), Expect = 1e-84
 Identities = 138/239 (57%), Positives = 173/239 (72%), Gaps = 23/239 (9%)
 Frame = +2

Query: 2    LYVDDLIYTGNDEKLCNDFKESMKREFDMSDLGKMKFFLGVEVNQTDAGIFIYQRKYAKE 181
            LYVDDLIYTGN+E +  +FK+SMK +F M+DLG+M+FFLGVEV Q D+GIF+YQ+KYA+E
Sbjct: 810  LYVDDLIYTGNNEAMFEEFKQSMKSQFSMTDLGRMRFFLGVEVKQLDSGIFVYQQKYARE 869

Query: 182  VLERFGMENSKMVTNPIVPGCKLTRDSDGKAVDVTTYKQMIGCLMYLTVTRPDLMYSVCL 361
            +LERF M+   +V +PIVPG KL RD +GK VDVT Y+Q++GCLMYL  TRPDL YSVCL
Sbjct: 870  LLERFHMDQCNVVCSPIVPGNKLIRDENGKTVDVTNYRQIVGCLMYLLATRPDLTYSVCL 929

Query: 362  TSRYMERPTEAHLAAVKRTLRYIKGTINLGILYSKLNAKKQCTEELTGFTDSDYAGDADD 541
             +RYMERPTE HLAA KR +RY+KGT++LGILY +    K     L G++DSDYAGD DD
Sbjct: 930  IARYMERPTEIHLAAAKRVMRYLKGTLDLGILYRRNEEMK-----LQGWSDSDYAGDLDD 984

Query: 542  RRSTSVYVFMMSN-----------------------AAVACGCQGVWLRRILDQLGMNQ 649
            R+STS YVFM+ +                       AA +C CQ +WLRR+L+QLG  Q
Sbjct: 985  RKSTSGYVFMLGSSIISWSSKKQAIVTLSTTEAEFVAAASCACQSIWLRRVLEQLGQKQ 1043


>dbj|GAU23361.1| hypothetical protein TSUD_334080 [Trifolium subterraneum]
          Length = 1322

 Score =  281 bits (718), Expect = 6e-84
 Identities = 142/239 (59%), Positives = 173/239 (72%), Gaps = 23/239 (9%)
 Frame = +2

Query: 2    LYVDDLIYTGNDEKLCNDFKESMKREFDMSDLGKMKFFLGVEVNQTDAGIFIYQRKYAKE 181
            LYVDDLIYTGND ++ N+FK+SM+++F M+DLGKM+FFLGVEV Q + GIFI Q+KY KE
Sbjct: 1003 LYVDDLIYTGNDVEMFNNFKDSMQKKFAMTDLGKMRFFLGVEVTQGEFGIFINQQKYVKE 1062

Query: 182  VLERFGMENSKMVTNPIVPGCKLTRDSDGKAVDVTTYKQMIGCLMYLTVTRPDLMYSVCL 361
            +L RFGME   MV +P+VPG KL +D +G AVD T YKQM+GCLMYL  TRPDL +SVCL
Sbjct: 1063 ILSRFGMEACNMVCSPMVPGNKLMKDEEGSAVDSTKYKQMVGCLMYLLATRPDLAFSVCL 1122

Query: 362  TSRYMERPTEAHLAAVKRTLRYIKGTINLGILYSKLNAKKQCTEELTGFTDSDYAGDADD 541
             +RYMERPTE HLAA KR LRY+KG++NLGILY     K+  T+EL G+TDSDYAGD +D
Sbjct: 1123 IARYMERPTEMHLAAAKRILRYLKGSMNLGILY-----KRNTTQELKGWTDSDYAGDLND 1177

Query: 542  RRSTSVYVFMMSN-----------------------AAVACGCQGVWLRRILDQLGMNQ 649
            R+STS YVF + +                       AA +C CQGVWL+RIL QLG  Q
Sbjct: 1178 RKSTSGYVFKVGSSAISWSSKKQPIVTLSTTEAEFVAAASCACQGVWLKRILHQLGQTQ 1236


>gb|PNX86749.1| copia-type polyprotein [Trifolium pratense]
          Length = 395

 Score =  260 bits (665), Expect = 1e-82
 Identities = 129/239 (53%), Positives = 162/239 (67%), Gaps = 23/239 (9%)
 Frame = +2

Query: 2   LYVDDLIYTGNDEKLCNDFKESMKREFDMSDLGKMKFFLGVEVNQTDAGIFIYQRKYAKE 181
           +YVDDLIYTGND ++ ++FK SMK +F M+DLGKMK+FLGVEVNQ + GIFI+Q+KY  E
Sbjct: 74  IYVDDLIYTGNDNQMMDEFKASMKDKFSMTDLGKMKYFLGVEVNQCEEGIFIHQQKYGTE 133

Query: 182 VLERFGMENSKMVTNPIVPGCKLTRDSDGKAVDVTTYKQMIGCLMYLTVTRPDLMYSVCL 361
           +L+RFGM+    V +PIVPGCKL +D    A D T YKQMIGCLMYL  TRPD+ Y+VCL
Sbjct: 134 ILQRFGMQECNKVCSPIVPGCKLVKDETALACDATLYKQMIGCLMYLLATRPDMTYAVCL 193

Query: 362 TSRYMERPTEAHLAAVKRTLRYIKGTINLGILYSKLNAKKQCTEELTGFTDSDYAGDADD 541
            +RYMERPTE H+A VKR LRY+KGT+ LG+LY   N        L G++DSDYAGD DD
Sbjct: 194 AARYMERPTEMHVAVVKRILRYLKGTLTLGVLYKCRNGNDFV---LQGWSDSDYAGDYDD 250

Query: 542 RRSTSVYVFMMSNAAV-----------------------ACGCQGVWLRRILDQLGMNQ 649
           R+STS YVF +  +A+                       +C CQ +WL+ IL  L + Q
Sbjct: 251 RKSTSGYVFTLGESAICWSSKKQPIVTLSTTEAEFVSAASCACQCIWLKNILSHLLVEQ 309


>gb|PRQ33949.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 425

 Score =  261 bits (667), Expect = 1e-82
 Identities = 132/236 (55%), Positives = 162/236 (68%), Gaps = 23/236 (9%)
 Frame = +2

Query: 2   LYVDDLIYTGNDEKLCNDFKESMKREFDMSDLGKMKFFLGVEVNQTDAGIFIYQRKYAKE 181
           LYVDDLIYTGND+ +  +FK+SM +EFDMSDLGKM++FLG+EV Q   GIFI Q+KYA +
Sbjct: 107 LYVDDLIYTGNDDAMMREFKDSMMKEFDMSDLGKMRYFLGLEVQQLQDGIFISQKKYAMD 166

Query: 182 VLERFGMENSKMVTNPIVPGCKLTRDSDGKAVDVTTYKQMIGCLMYLTVTRPDLMYSVCL 361
           VL RFGME S  V NPIVPG K+++D  G  VD T YKQ++G LMYLT TRPDLMY+V L
Sbjct: 167 VLRRFGMEKSNAVLNPIVPGFKISKDESGIEVDGTFYKQLVGSLMYLTSTRPDLMYAVSL 226

Query: 362 TSRYMERPTEAHLAAVKRTLRYIKGTINLGILYSKLNAKKQCTEELTGFTDSDYAGDADD 541
            +RYM +PTE HL A KR LRY+KGT+  GILY     KK+ +  LT +TDSDYAG  +D
Sbjct: 227 IARYMSQPTELHLMAAKRVLRYVKGTVGFGILY-----KKEASGVLTAYTDSDYAGCLED 281

Query: 542 RRSTSVYVFMMSN-----------------------AAVACGCQGVWLRRILDQLG 640
           R+STS Y FMMS+                       AA AC CQ +W++R+L  LG
Sbjct: 282 RKSTSGYAFMMSSGAVAWSSRKQPIVTLSTTEAEFVAAAACACQAIWMKRVLKMLG 337


>gb|PNX80439.1| copia-type polyprotein [Trifolium pratense]
          Length = 335

 Score =  256 bits (655), Expect = 5e-82
 Identities = 132/239 (55%), Positives = 166/239 (69%), Gaps = 23/239 (9%)
 Frame = +2

Query: 2   LYVDDLIYTGNDEKLCNDFKESMKREFDMSDLGKMKFFLGVEVNQTDAGIFIYQRKYAKE 181
           LYVDDLI+TG++E +  +FK SMK +F M DLGKM+FFLGVEV Q   GIFI Q+KY KE
Sbjct: 47  LYVDDLIFTGSNEGMFEEFKTSMKSKFSMIDLGKMRFFLGVEVKQFSEGIFICQQKYVKE 106

Query: 182 VLERFGMENSKMVTNPIVPGCKLTRDSDGKAVDVTTYKQMIGCLMYLTVTRPDLMYSVCL 361
           +L RF M+    V +P+VPG KL RD +GK VD T Y+QM GCLMYL  TRPDL + +CL
Sbjct: 107 LLLRFKMDQCNKVCSPMVPGNKLIRDENGKFVDATNYRQMTGCLMYLLATRPDLTFYICL 166

Query: 362 TSRYMERPTEAHLAAVKRTLRYIKGTINLGILYSKLNAKKQCTEELTGFTDSDYAGDADD 541
            +RYMERPTE HLAA+K  +RY+KGT++LGI Y K N KK    +L G++DSDYAGD DD
Sbjct: 167 VARYMERPTEIHLAAIKIIMRYLKGTMDLGIWY-KRNEKK----KLVGWSDSDYAGDLDD 221

Query: 542 RRSTSVYVFMMSN-----------------------AAVACGCQGVWLRRILDQLGMNQ 649
           R+STS YV+M+ +                       AA +C CQG+WLRRIL++LG +Q
Sbjct: 222 RKSTSGYVYMLGSSAISWSSKKQAIVTLSTTEAEFVAAASCACQGIWLRRILEELGQSQ 280


>gb|PNX81877.1| hypothetical protein L195_g037902, partial [Trifolium pratense]
          Length = 575

 Score =  264 bits (674), Expect = 5e-82
 Identities = 131/236 (55%), Positives = 165/236 (69%), Gaps = 23/236 (9%)
 Frame = +2

Query: 2   LYVDDLIYTGNDEKLCNDFKESMKREFDMSDLGKMKFFLGVEVNQTDAGIFIYQRKYAKE 181
           LYVDDLI+TGNDE +  +FK+SM++EF+MSDLGKM +FLGVEV Q + GI+I QRKY  +
Sbjct: 269 LYVDDLIFTGNDENMFKEFKKSMEKEFNMSDLGKMHYFLGVEVIQNEEGIYICQRKYVTD 328

Query: 182 VLERFGMENSKMVTNPIVPGCKLTRDSDGKAVDVTTYKQMIGCLMYLTVTRPDLMYSVCL 361
           +LERFGME S +  NPI PGCKL +D +G  VD T YKQ++GCLMYL  TRPDLMY + L
Sbjct: 329 LLERFGMEKSNLSRNPIAPGCKLIKDENGVKVDATMYKQVVGCLMYLAATRPDLMYVLSL 388

Query: 362 TSRYMERPTEAHLAAVKRTLRYIKGTINLGILYSKLNAKKQCTEELTGFTDSDYAGDADD 541
            SR+M  PTE H+ AVKR LRY+ GTINLGI+Y     K+   E+L  +TDSDYAGD DD
Sbjct: 389 ISRFMNCPTELHMHAVKRVLRYLNGTINLGIMY-----KRGGNEKLEAYTDSDYAGDLDD 443

Query: 542 RRSTSVYVFMMSN-----------------------AAVACGCQGVWLRRILDQLG 640
           R+STS YVFM+S                        AA +C CQ +W++R+L++LG
Sbjct: 444 RKSTSGYVFMLSAGAVSWSSKKQPVVTLSTTEAEFIAAASCACQSIWMQRVLEKLG 499


>gb|PNX95204.1| copia-type polyprotein [Trifolium pratense]
          Length = 1328

 Score =  275 bits (704), Expect = 5e-82
 Identities = 144/241 (59%), Positives = 167/241 (69%), Gaps = 25/241 (10%)
 Frame = +2

Query: 2    LYVDDLIYTGNDEKLCNDFKESMKREFDMSDLGKMKFFLGVEVNQTDAGIFIYQRKYAKE 181
            LYVDDLIYTGND++L  DFK SMKR F M+DLGKM +FLGVEV Q D GIFI Q+KYA E
Sbjct: 1008 LYVDDLIYTGNDDELIRDFKSSMKRNFAMTDLGKMSYFLGVEVTQNDRGIFINQQKYAAE 1067

Query: 182  VLERFGMENSKMVTNPIVPGCKLTRDSDGKAVDVTTYKQMIGCLMYLTVTRPDLMYSVCL 361
            +L RF M++   V +PIVPG KL +D +GK VD T +KQM+GCLMYL  TRPDL YSVCL
Sbjct: 1068 ILNRFNMDSCNFVCSPIVPGTKLFKDENGKCVDSTQFKQMVGCLMYLIATRPDLCYSVCL 1127

Query: 362  TSRYMERPTEAHLAAVKRTLRYIKGTINLGILYSK--LNAKKQCTEELTGFTDSDYAGDA 535
             +RYMERPTE HLAA KR LRY+KGTI+ G+LY K  LN K      L G+TDSDYAGD+
Sbjct: 1128 IARYMERPTEIHLAAAKRILRYLKGTISYGVLYDKGSLNMK------LEGWTDSDYAGDS 1181

Query: 536  DDRRSTSVYVFMMSN-----------------------AAVACGCQGVWLRRILDQLGMN 646
            DDR+STS YVF + +                       AA +  CQGVWLRRIL QLG  
Sbjct: 1182 DDRKSTSGYVFKLGSGAISWSSKKQPIVTLSTTEAEYVAAASGACQGVWLRRILQQLGQK 1241

Query: 647  Q 649
            Q
Sbjct: 1242 Q 1242


>gb|PNX55944.1| putative LRR receptor-like protein kinase, partial [Trifolium
           pratense]
          Length = 378

 Score =  257 bits (657), Expect = 9e-82
 Identities = 130/230 (56%), Positives = 160/230 (69%), Gaps = 23/230 (10%)
 Frame = +2

Query: 2   LYVDDLIYTGNDEKLCNDFKESMKREFDMSDLGKMKFFLGVEVNQTDAGIFIYQRKYAKE 181
           +YVDDLIYTG+   +  +FK SM+R+F M+DLG M+FFLGVEV QTD GIFIYQ+KYA++
Sbjct: 154 IYVDDLIYTGSSALMFEEFKHSMERKFSMTDLGXMRFFLGVEVMQTDHGIFIYQQKYARD 213

Query: 182 VLERFGMENSKMVTNPIVPGCKLTRDSDGKAVDVTTYKQMIGCLMYLTVTRPDLMYSVCL 361
           +L RF M     V +PIVPG KLTRD DG  VD T Y+Q+IGCLMYL  TRPDL +SVCL
Sbjct: 214 LLMRFNMAQCNSVNSPIVPGNKLTRDQDGSIVDATNYRQIIGCLMYLLATRPDLTFSVCL 273

Query: 362 TSRYMERPTEAHLAAVKRTLRYIKGTINLGILYSKLNAKKQCTEELTGFTDSDYAGDADD 541
            +RYME+P EAHL A KR +RY+KGT++LGILY + +  K     L G++DSDYAGD DD
Sbjct: 274 IARYMEKPKEAHLMAAKRVMRYLKGTLSLGILYKRGDDLK-----LQGWSDSDYAGDFDD 328

Query: 542 RRSTSVYVFMMSN-----------------------AAVACGCQGVWLRR 622
           R+STS YVFM+ +                       AA AC CQG+WLRR
Sbjct: 329 RKSTSGYVFMLGSSPISWSSKKQAIVTLSTTEAEFVAATACACQGIWLRR 378


>dbj|GAU31929.1| hypothetical protein TSUD_271130, partial [Trifolium subterraneum]
          Length = 541

 Score =  261 bits (666), Expect = 4e-81
 Identities = 128/235 (54%), Positives = 163/235 (69%), Gaps = 23/235 (9%)
 Frame = +2

Query: 2   LYVDDLIYTGNDEKLCNDFKESMKREFDMSDLGKMKFFLGVEVNQTDAGIFIYQRKYAKE 181
           LYVDDLI TGND  + +DFKESMK+ F M+DLGKMK+FLGVEV Q++ GIFI+Q KYA E
Sbjct: 217 LYVDDLICTGNDLSMIHDFKESMKKNFAMTDLGKMKYFLGVEVTQSEDGIFIHQHKYALE 276

Query: 182 VLERFGMENSKMVTNPIVPGCKLTRDSDGKAVDVTTYKQMIGCLMYLTVTRPDLMYSVCL 361
           +L+RFGMEN   V +PIVPGCKL++D +G A D   +KQM+GCLMYL  TRPDL YS+CL
Sbjct: 277 ILKRFGMENCNKVCSPIVPGCKLSKDENGSATDAKRFKQMVGCLMYLLATRPDLAYSICL 336

Query: 362 TSRYMERPTEAHLAAVKRTLRYIKGTINLGILYSKLNAKKQCTEELTGFTDSDYAGDADD 541
            +R+MERPT  H+A VKR +RY+KGT+  GI+Y   N K+    EL G++DSDYAGD +D
Sbjct: 337 VARFMERPTVMHIAVVKRIMRYLKGTLTDGIMYKHTNDKRL---ELIGWSDSDYAGDLND 393

Query: 542 RRSTSVYVFMMSN-----------------------AAVACGCQGVWLRRILDQL 637
           R++TS YVFM+                         AA  C CQ +WL+ +L+ L
Sbjct: 394 RKNTSGYVFMLGTGAISWSSKKQPILTLSTTEAEYVAAAVCACQCIWLKNVLNHL 448


>gb|PNX87899.1| putative LRR receptor-like protein kinase, partial [Trifolium
           pratense]
          Length = 368

 Score =  255 bits (651), Expect = 6e-81
 Identities = 129/240 (53%), Positives = 163/240 (67%), Gaps = 23/240 (9%)
 Frame = +2

Query: 2   LYVDDLIYTGNDEKLCNDFKESMKREFDMSDLGKMKFFLGVEVNQTDAGIFIYQRKYAKE 181
           LYVDDLIYT N+ K+  DFK SMK  F M+DLG+M++FL VEV Q   GIFI Q+KYAKE
Sbjct: 93  LYVDDLIYTRNNTKMFEDFKHSMKGRFAMTDLGQMRYFLRVEVTQDKYGIFINQQKYAKE 152

Query: 182 VLERFGMENSKMVTNPIVPGCKLTRDSDGKAVDVTTYKQMIGCLMYLTVTRPDLMYSVCL 361
           +L RFGM+    V++PIVPGCKL++D +GK +D T YKQ++GCLMYL  TR DL +SVCL
Sbjct: 153 ILSRFGMKMCNAVSSPIVPGCKLSKDENGKQIDATKYKQIVGCLMYLLATRHDLTFSVCL 212

Query: 362 TSRYMERPTEAHLAAVKRTLRYIKGTINLGILYSKLNAKKQCTEELTGFTDSDYAGDADD 541
            +RYM++PT+ H  A KR LRY+KGT++LGILY + N       +L G+TDSDYAGD DD
Sbjct: 213 IARYMDKPTDMHFTAAKRILRYLKGTMSLGILYKRGNEL-----QLQGWTDSDYAGDIDD 267

Query: 542 RRSTSVYVFMMSN-----------------------AAVACGCQGVWLRRILDQLGMNQT 652
           RRSTS Y F + +                       AA +C CQ VWL++IL QLG  Q+
Sbjct: 268 RRSTSGYXFKLGSSAISWSSXKQPIVTLSTTEAEFVAAASCACQAVWLKKILHQLGKGQS 327


>dbj|GAU29997.1| hypothetical protein TSUD_160820 [Trifolium subterraneum]
          Length = 1245

 Score =  272 bits (695), Expect = 6e-81
 Identities = 135/239 (56%), Positives = 170/239 (71%), Gaps = 23/239 (9%)
 Frame = +2

Query: 2    LYVDDLIYTGNDEKLCNDFKESMKREFDMSDLGKMKFFLGVEVNQTDAGIFIYQRKYAKE 181
            LYVDDLIYTGND KL  DFK SM+ +F M+DLGKM++FLGVEV Q++ GI I Q+KYAKE
Sbjct: 926  LYVDDLIYTGNDSKLFEDFKHSMQGKFAMTDLGKMRYFLGVEVTQSEHGIMISQQKYAKE 985

Query: 182  VLERFGMENSKMVTNPIVPGCKLTRDSDGKAVDVTTYKQMIGCLMYLTVTRPDLMYSVCL 361
            +L RFGME    V +PIVPG KLT+D +GK VD T YKQM+GCLMYL  TRPDL YSVCL
Sbjct: 986  ILARFGMEACNSVGSPIVPGNKLTKDENGKLVDATKYKQMVGCLMYLLATRPDLAYSVCL 1045

Query: 362  TSRYMERPTEAHLAAVKRTLRYIKGTINLGILYSKLNAKKQCTEELTGFTDSDYAGDADD 541
             +RYM++PTE H AA KR LRY+KG+I+LG+LY     K+   +EL G+TDSDYAGD+DD
Sbjct: 1046 IARYMDKPTEIHSAAAKRILRYLKGSISLGVLY-----KRGKNQELVGWTDSDYAGDSDD 1100

Query: 542  RRSTSVYVFMMSNAAV-----------------------ACGCQGVWLRRILDQLGMNQ 649
            R+STS YVF   ++A+                       +C CQ +WL+++++QLG  Q
Sbjct: 1101 RKSTSGYVFKFGSSAISWSSKKQPIVTLSTTEAEFVVAASCACQAIWLKKVMNQLGQKQ 1159


>gb|PRQ42077.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1044

 Score =  270 bits (690), Expect = 7e-81
 Identities = 137/239 (57%), Positives = 166/239 (69%), Gaps = 23/239 (9%)
 Frame = +2

Query: 2    LYVDDLIYTGNDEKLCNDFKESMKREFDMSDLGKMKFFLGVEVNQTDAGIFIYQRKYAKE 181
            LYVDDLI+TGNDE +  +FK+SMK EFDMSDLG M++FLGVEV Q +AGI+I Q+KYA E
Sbjct: 726  LYVDDLIFTGNDEYMFEEFKKSMKDEFDMSDLGMMRYFLGVEVVQNEAGIYICQKKYASE 785

Query: 182  VLERFGMENSKMVTNPIVPGCKLTRDSDGKAVDVTTYKQMIGCLMYLTVTRPDLMYSVCL 361
            +LERFGME +  V NPIVPG KL +D  G  VD T YKQ++G LMYLT TRPDLMY V L
Sbjct: 786  ILERFGMEKANSVRNPIVPGFKLMKDEGGVKVDATMYKQIVGSLMYLTATRPDLMYVVSL 845

Query: 362  TSRYMERPTEAHLAAVKRTLRYIKGTINLGILYSKLNAKKQCTEELTGFTDSDYAGDADD 541
             SR+M  PTE H+ A KR LRY+KGT+NLG+LY     ++   E+L  FTDSDYAGD DD
Sbjct: 846  ISRFMSSPTELHMQAAKRVLRYLKGTVNLGVLY-----RRNGEEKLEAFTDSDYAGDVDD 900

Query: 542  RRSTSVYVFMMSNAAVA-----------------------CGCQGVWLRRILDQLGMNQ 649
            R+STS Y+FM S+ AV+                       C CQGVW+RRI ++LG  Q
Sbjct: 901  RKSTSGYIFMFSDGAVSWSSKKQPVVTLSTTEAEFIAAAYCACQGVWMRRIFERLGHAQ 959


>gb|PNY15642.1| copia-type polyprotein [Trifolium pratense]
          Length = 822

 Score =  266 bits (680), Expect = 1e-80
 Identities = 132/239 (55%), Positives = 165/239 (69%), Gaps = 23/239 (9%)
 Frame = +2

Query: 2    LYVDDLIYTGNDEKLCNDFKESMKREFDMSDLGKMKFFLGVEVNQTDAGIFIYQRKYAKE 181
            LYVDDLIYTGND+++  +FK SMK++F M+DLGKMK+FLGVEVNQT  GIFI Q+KYA +
Sbjct: 502  LYVDDLIYTGNDKQMMEEFKGSMKKKFAMTDLGKMKYFLGVEVNQTQQGIFINQQKYASD 561

Query: 182  VLERFGMENSKMVTNPIVPGCKLTRDSDGKAVDVTTYKQMIGCLMYLTVTRPDLMYSVCL 361
            +L RFGM++   V  PIVPGCKL +D +G+  D T+YKQMIGCLMYL  TRPDL YSVCL
Sbjct: 562  ILTRFGMQDCNKVCTPIVPGCKLVKDENGRPADATSYKQMIGCLMYLLATRPDLTYSVCL 621

Query: 362  TSRYMERPTEAHLAAVKRTLRYIKGTINLGILYSKLNAKKQCTEELTGFTDSDYAGDADD 541
             +RYM++PTE H+ AVKR +RY+KGT++ GILY   + +      L G+TDSDYAGD DD
Sbjct: 622  AARYMDKPTEMHVIAVKRIMRYLKGTMSYGILYKSTDEE---NVTLVGWTDSDYAGDYDD 678

Query: 542  RRSTSVYVFMMSN-----------------------AAVACGCQGVWLRRILDQLGMNQ 649
            R+STS YVF +                         AA +  CQG+WLR +L QL   Q
Sbjct: 679  RKSTSGYVFSIGTGAISWSSKKQPIVTLSTTEAEFIAAASSACQGIWLRNVLKQLRQEQ 737


>gb|PRQ52345.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1316

 Score =  271 bits (692), Expect = 2e-80
 Identities = 138/239 (57%), Positives = 166/239 (69%), Gaps = 23/239 (9%)
 Frame = +2

Query: 2    LYVDDLIYTGNDEKLCNDFKESMKREFDMSDLGKMKFFLGVEVNQTDAGIFIYQRKYAKE 181
            LYVDDLI+TGNDE +  +FK+SMK EFDMSDLG M++FLGVEV Q +AGI+I Q+KYA E
Sbjct: 998  LYVDDLIFTGNDEYMFEEFKKSMKDEFDMSDLGMMRYFLGVEVVQNEAGIYICQKKYASE 1057

Query: 182  VLERFGMENSKMVTNPIVPGCKLTRDSDGKAVDVTTYKQMIGCLMYLTVTRPDLMYSVCL 361
            +LERFGME +  V NPIVPG KL +D  G  VD T YKQ++G LMYLT TRPDLMY V L
Sbjct: 1058 ILERFGMEKANSVRNPIVPGIKLMKDEGGVKVDATMYKQIVGSLMYLTATRPDLMYVVSL 1117

Query: 362  TSRYMERPTEAHLAAVKRTLRYIKGTINLGILYSKLNAKKQCTEELTGFTDSDYAGDADD 541
             SR+M  PTE H+ A KR LRY+KGTINLG+LY     ++   E+L  FTDSDYAGD DD
Sbjct: 1118 ISRFMSSPTELHMQAAKRVLRYLKGTINLGVLY-----RRNGEEKLEAFTDSDYAGDVDD 1172

Query: 542  RRSTSVYVFMMSNAAVA-----------------------CGCQGVWLRRILDQLGMNQ 649
            R+STS Y+FM S+ AV+                       C CQGVW+RRI ++LG  Q
Sbjct: 1173 RKSTSGYIFMFSDGAVSWSSKKQPVVTLSTTEAEFIAAAYCACQGVWMRRIFERLGHAQ 1231


>ref|XP_015582183.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Ricinus communis]
          Length = 392

 Score =  254 bits (649), Expect = 2e-80
 Identities = 129/232 (55%), Positives = 159/232 (68%), Gaps = 23/232 (9%)
 Frame = +2

Query: 2   LYVDDLIYTGNDEKLCNDFKESMKREFDMSDLGKMKFFLGVEVNQTDAGIFIYQRKYAKE 181
           LYVDDLI+TGNDE++  +FK SM REFDM+DLGKM++FLG+EV Q+  GIFI Q++YA+E
Sbjct: 74  LYVDDLIFTGNDEEMFIEFKSSMMREFDMTDLGKMRYFLGIEVLQSGDGIFICQKRYAQE 133

Query: 182 VLERFGMENSKMVTNPIVPGCKLTRDSDGKAVDVTTYKQMIGCLMYLTVTRPDLMYSVCL 361
           VL RF M+N   V NPI+PGC+LTRD +G  VD + YKQ+IG LMYLT TRPD+M+ V L
Sbjct: 134 VLARFNMDNCNPVQNPIIPGCRLTRDENGARVDSSRYKQLIGSLMYLTATRPDIMFIVSL 193

Query: 362 TSRYMERPTEAHLAAVKRTLRYIKGTINLGILYSKLNAKKQCTEELTGFTDSDYAGDADD 541
            SRYME+PTE H    KR LRYIKGT   G+ Y     K+    EL  FTDSDYAGD+DD
Sbjct: 194 LSRYMEQPTELHFQVAKRVLRYIKGTFEFGVFY-----KRGGDAELIAFTDSDYAGDSDD 248

Query: 542 RRSTSVYVFMMSN-----------------------AAVACGCQGVWLRRIL 628
           RRSTS +VF++++                        A AC CQ VWL+RIL
Sbjct: 249 RRSTSGFVFLLNSRVVSWFSKKQTIVTLSTTEAEFVTAAACACQTVWLKRIL 300


>ref|XP_018816630.1| PREDICTED: uncharacterized protein LOC108988006 [Juglans regia]
          Length = 372

 Score =  253 bits (647), Expect = 3e-80
 Identities = 132/239 (55%), Positives = 160/239 (66%), Gaps = 23/239 (9%)
 Frame = +2

Query: 2   LYVDDLIYTGNDEKLCNDFKESMKREFDMSDLGKMKFFLGVEVNQTDAGIFIYQRKYAKE 181
           LYVDDLI+TGNDE +   FK SMK EFDM+DLGKMK+FLGVEV Q    I+I QRKYAKE
Sbjct: 54  LYVDDLIFTGNDESMFVKFKNSMKLEFDMTDLGKMKYFLGVEVLQNPESIYISQRKYAKE 113

Query: 182 VLERFGMENSKMVTNPIVPGCKLTRDSDGKAVDVTTYKQMIGCLMYLTVTRPDLMYSVCL 361
           VLE+F ME S  V NPIVPG +L +D +G  V+ T YKQ++G LMYLT TRPDLMY V L
Sbjct: 114 VLEKFRMEKSNSVKNPIVPGFRLMKDEEGAKVNATMYKQLVGSLMYLTATRPDLMYVVSL 173

Query: 362 TSRYMERPTEAHLAAVKRTLRYIKGTINLGILYSKLNAKKQCTEELTGFTDSDYAGDADD 541
            SR+M  PTE HL   KR LRY+KGT++LGI Y     +K+   EL  +TDSDYA   +D
Sbjct: 174 ISRFMANPTELHLQVAKRVLRYLKGTVDLGIFY-----RKEGNGELMAYTDSDYARYVND 228

Query: 542 RRSTSVYVFMMSN-----------------------AAVACGCQGVWLRRILDQLGMNQ 649
           RRSTS YVF++S                        AA +C CQGVW+RR+L++ G +Q
Sbjct: 229 RRSTSGYVFLLSEGVVSWSSKKQPVVALSTTEAEFVAAASCACQGVWMRRVLEKFGHSQ 287


>gb|KYP57482.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 380

 Score =  252 bits (643), Expect = 1e-79
 Identities = 131/239 (54%), Positives = 158/239 (66%), Gaps = 23/239 (9%)
 Frame = +2

Query: 2   LYVDDLIYTGNDEKLCNDFKESMKREFDMSDLGKMKFFLGVEVNQTDAGIFIYQRKYAKE 181
           +YVDDLIYTG+DE +  DFK SM  EFDM+DLG M+FFLG+EV Q   GI+I Q+KYA E
Sbjct: 56  VYVDDLIYTGDDELMMEDFKRSMHGEFDMTDLGMMRFFLGIEVLQCSDGIYICQKKYALE 115

Query: 182 VLERFGMENSKMVTNPIVPGCKLTRDSDGKAVDVTTYKQMIGCLMYLTVTRPDLMYSVCL 361
           +L RFGME S  + NPIVPG KL RD +G  V+ T +KQM+G LMY+T TRPDLM+ V L
Sbjct: 116 ILRRFGMEESNPICNPIVPGYKLCRDEEGIKVNETHFKQMVGSLMYITTTRPDLMFVVSL 175

Query: 362 TSRYMERPTEAHLAAVKRTLRYIKGTINLGILYSKLNAKKQCTEELTGFTDSDYAGDADD 541
            SRYM +PTE H    KR LRY+KGT N GILY     K+   EEL  +TDSDYAGD +D
Sbjct: 176 ISRYMSQPTEMHAKVAKRILRYLKGTENYGILY-----KRGGIEELQAYTDSDYAGDLED 230

Query: 542 RRSTSVYVFMMSNAAVA-----------------------CGCQGVWLRRILDQLGMNQ 649
           R+STS YVF+MS  +VA                       C CQ VW+RR+L +LG  Q
Sbjct: 231 RKSTSGYVFIMSGGSVAWSSRKQPIVTISTTEAEFIAAAGCACQAVWMRRVLKELGYKQ 289


>dbj|GAU44848.1| hypothetical protein TSUD_112220 [Trifolium subterraneum]
          Length = 1289

 Score =  268 bits (685), Expect = 2e-79
 Identities = 134/239 (56%), Positives = 168/239 (70%), Gaps = 23/239 (9%)
 Frame = +2

Query: 2    LYVDDLIYTGNDEKLCNDFKESMKREFDMSDLGKMKFFLGVEVNQTDAGIFIYQRKYAKE 181
            LYVDDLIYTGND KL  +FK SM+ +F M+DLGKM++FLGVEV Q++ GI I Q+KYAKE
Sbjct: 969  LYVDDLIYTGNDSKLFEEFKHSMQGKFAMTDLGKMRYFLGVEVTQSEHGIMISQQKYAKE 1028

Query: 182  VLERFGMENSKMVTNPIVPGCKLTRDSDGKAVDVTTYKQMIGCLMYLTVTRPDLMYSVCL 361
            +L RFGME    V +PIVPG KLT+D +GK VD T YKQM+GCLMYL  TRPDL YSVCL
Sbjct: 1029 ILARFGMEACNGVGSPIVPGNKLTKDENGKLVDATKYKQMVGCLMYLLATRPDLAYSVCL 1088

Query: 362  TSRYMERPTEAHLAAVKRTLRYIKGTINLGILYSKLNAKKQCTEELTGFTDSDYAGDADD 541
             +RYM++PTE H AA KR LRY+KG+I+LG+LY     K+   +EL G+TDSDYAGD+DD
Sbjct: 1089 IARYMDKPTEIHSAAAKRILRYLKGSISLGVLY-----KRSMNQELVGWTDSDYAGDSDD 1143

Query: 542  RRSTSVYVFMMSN-----------------------AAVACGCQGVWLRRILDQLGMNQ 649
            R+STS YVF   +                       AA +C CQ +W +++++QLG  Q
Sbjct: 1144 RKSTSGYVFKFGSSAISWSSKKQPIVTLSTTEAEFVAAASCACQAIWPKKLMNQLGQKQ 1202


>gb|PRQ38020.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 610

 Score =  258 bits (659), Expect = 2e-79
 Identities = 132/239 (55%), Positives = 163/239 (68%), Gaps = 23/239 (9%)
 Frame = +2

Query: 2   LYVDDLIYTGNDEKLCNDFKESMKREFDMSDLGKMKFFLGVEVNQTDAGIFIYQRKYAKE 181
           LYVDDLI+TGN EK+   FKESM +EFDMSDLGKM++FLGVEV Q   GI+I Q+K+AKE
Sbjct: 292 LYVDDLIFTGNCEKMFVKFKESMMQEFDMSDLGKMRYFLGVEVLQCTEGIYISQKKFAKE 351

Query: 182 VLERFGMENSKMVTNPIVPGCKLTRDSDGKAVDVTTYKQMIGCLMYLTVTRPDLMYSVCL 361
           +LERFGM+    V NPIVPG K+ +D +G  VD TTYKQM+G LMYLTVTRPDLM+ VC+
Sbjct: 352 LLERFGMDGCNSVHNPIVPGVKIGKDENGVRVDATTYKQMVGSLMYLTVTRPDLMFVVCM 411

Query: 362 TSRYMERPTEAHLAAVKRTLRYIKGTINLGILYSKLNAKKQCTEELTGFTDSDYAGDADD 541
            SR+M  PTE H   VKR LRY+ GT+ LGI Y     KK+  + L  +TDSDYAGD  D
Sbjct: 412 ASRFMANPTELHFQIVKRVLRYVGGTVELGIFY-----KKRGDQMLQAYTDSDYAGDVSD 466

Query: 542 RRSTSVYVFMMSN-----------------------AAVACGCQGVWLRRILDQLGMNQ 649
           RRSTS YVF +S                        AA +C  QG+W++R+L++LG+ Q
Sbjct: 467 RRSTSGYVFSLSGGAVSWMSKKQPVVTLSTTEAEYVAAASCATQGIWMQRVLEKLGLTQ 525