BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00027829
         (610 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAS06276.1| polymerase polyprotein [Dahlia common mosaic virus]   131   9e-32
ref|YP_009182100.1| polyprotein [Blueberry fruit drop associated...   131   1e-31
gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus]    129   3e-31
gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland]    129   3e-31
ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus] >...   128   8e-31
ref|YP_002519387.1| putative enzymatic polyprotein [Rudbeckia fl...   126   6e-30
gb|AMN10080.1| reverse transcriptase [Angelica bushy stunt virus]     125   1e-29
ref|YP_006907834.1| polyprotein [Horseradish latent virus] >gi|5...   124   2e-29
ref|YP_009165750.1| ORF5 [Atractylodes mild mottle virus] >gi|92...   124   2e-29
sp|Q00962.1|POL_CAMVN RecName: Full=Enzymatic polyprotein; Inclu...   123   6e-29
ref|YP_006607892.1| reverse transcriptase [Soybean Putnam virus]...   122   2e-28
gb|AAD37341.1|AF140604_5 reverse transcriptase [Cauliflower mosa...   121   2e-28
dbj|BAO53568.1| reverse transcriptase [Cauliflower mosaic virus]      121   2e-28
dbj|BAO53547.1| reverse transcriptase [Cauliflower mosaic virus]      121   2e-28
dbj|BAO53435.1| reverse transcriptase [Cauliflower mosaic virus]      121   2e-28
sp|P03556.1|POL_CAMVD RecName: Full=Enzymatic polyprotein; Inclu...   121   3e-28
gb|AHA91342.1| reverse transcriptase [Cauliflower mosaic virus] ...   121   3e-28
gb|AHA91338.1| reverse transcriptase [Cauliflower mosaic virus]       121   3e-28
gb|AHA91331.1| reverse transcriptase [Cauliflower mosaic virus]       121   3e-28
gb|AHA91317.1| reverse transcriptase [Cauliflower mosaic virus]       121   3e-28

>dbj|BAS06276.1| polymerase polyprotein [Dahlia common mosaic virus]
          Length = 672

 Score =  131 bits (329), Expect = 9e-32
 Identities = 74/199 (37%), Positives = 102/199 (51%), Gaps = 3/199 (1%)
 Frame = +3

Query: 6   SPGIFQERLDKIFKDCHKFXXXXXXXXXXXXXXXEEHNKHLFIFATRSYENGLVLSKKKA 185
           +P IFQ  +    +   +F               EEH  H+     R    G++LSKKKA
Sbjct: 373 APSIFQRHMQNALRGLEEFCLVYVDDIIVFSDKEEEHYTHVLKVLKRIESLGIILSKKKA 432

Query: 186 EIAKERIDYLGLIIDKGIIELQSHIFEFSLEFPDQLENVKQVQSFLGHINYASQFIKNCA 365
            + KE+I++LGL ID+G    Q+HI E    FPD+LE+ KQ+Q FLG + YA  +I   A
Sbjct: 433 NLFKEKINFLGLEIDRGTHTPQNHILEHLHNFPDRLEDKKQLQRFLGVLTYADSYIPKLA 492

Query: 366 XXXXXXXXXXXXXXVFEWTNEDTNXXXXXXXXXXNLDKLPLPKEEDELYIKTDASDKYWG 545
                         V+ W   DT+          N  KL LPK+ED L I+TDASD +WG
Sbjct: 493 EKRKPLQVKLKKDQVWIWNQSDTDYVKKIKKGLVNFPKLYLPKKEDSLIIETDASDHFWG 552

Query: 546 AVLRRQ---GDDIILRYTS 593
            VL+ Q   G+++I RY+S
Sbjct: 553 GVLKAQTTEGNELICRYSS 571


>ref|YP_009182100.1| polyprotein [Blueberry fruit drop associated virus]
 gb|ALN12435.1| polyprotein [Blueberry fruit drop associated virus]
          Length = 2597

 Score =  131 bits (329), Expect = 1e-31
 Identities = 71/200 (35%), Positives = 108/200 (54%), Gaps = 4/200 (2%)
 Frame = +3

Query: 6    SPGIFQERLDKIFKDCHKFXXXXXXXXXXXXXXXEEHNKHLFIFATRSYENGLVLSKKKA 185
            +P IFQ R+DKIFKDC++F               EEH  HL I   +  +NG+++ + K 
Sbjct: 1832 APNIFQRRMDKIFKDCYQFCGVYVDDILVFSKDKEEHLLHLDIIINKIVQNGIIIGRTKY 1891

Query: 186  EIAKERIDYLGLIIDKGIIELQSHIFEFSLEFPDQLENVKQVQSFLGHINYASQFIKNCA 365
            E+ +E ID+LG+ I KG I+LQ HI    +EFPD+L++  QVQ FLG +NYA +FI+  A
Sbjct: 1892 ELVRESIDFLGVTICKGKIKLQPHILTHLMEFPDKLKDRLQVQQFLGCVNYAGKFIQRLA 1951

Query: 366  XXXXXXXXXXXXXXVFEWTNEDTNXXXXXXXXXXNLDKLPLPKEEDELYIKTDASDKYW- 542
                           +++T +D            NL +L LP    ++ ++TDASD +W 
Sbjct: 1952 ELCSVLHTKLKKDHKWKFTEDDVKRVQLIKKVCANLPELTLPPPTWKIVLQTDASDHHWA 2011

Query: 543  ---GAVLRRQGDDIILRYTS 593
               GA+   + +++I  Y S
Sbjct: 2012 GTIGAISPDKKEEVICAYRS 2031


>gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus]
          Length = 673

 Score =  129 bits (325), Expect = 3e-31
 Identities = 73/199 (36%), Positives = 101/199 (50%), Gaps = 3/199 (1%)
 Frame = +3

Query: 6   SPGIFQERLDKIFKDCHKFXXXXXXXXXXXXXXXEEHNKHLFIFATRSYENGLVLSKKKA 185
           +P IFQ  +    +   +F               EEH  H+     R    G++LSKKK 
Sbjct: 374 APSIFQRHMQNALRGLEEFCLVYVDDIIVFSDKEEEHYTHVLKVLKRIESLGIILSKKKT 433

Query: 186 EIAKERIDYLGLIIDKGIIELQSHIFEFSLEFPDQLENVKQVQSFLGHINYASQFIKNCA 365
            + KE+I++LGL ID+G    Q+HI E    FPD+LE+ KQ+Q FLG + YA  +I   A
Sbjct: 434 NLFKEKINFLGLEIDRGTHTPQNHILEHLHNFPDRLEDKKQLQRFLGVLTYADSYIPKLA 493

Query: 366 XXXXXXXXXXXXXXVFEWTNEDTNXXXXXXXXXXNLDKLPLPKEEDELYIKTDASDKYWG 545
                         V+ W   DT+          N  KL LPK+ED L I+TDASD +WG
Sbjct: 494 EKRKPLQVKLKKDQVWIWNQSDTDYVKKIKKGLVNFPKLYLPKKEDSLIIETDASDHFWG 553

Query: 546 AVLRRQ---GDDIILRYTS 593
            VL+ Q   G+++I RY+S
Sbjct: 554 GVLKAQTTEGNELICRYSS 572


>gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland]
          Length = 673

 Score =  129 bits (325), Expect = 3e-31
 Identities = 73/199 (36%), Positives = 102/199 (51%), Gaps = 3/199 (1%)
 Frame = +3

Query: 6   SPGIFQERLDKIFKDCHKFXXXXXXXXXXXXXXXEEHNKHLFIFATRSYENGLVLSKKKA 185
           +P IFQ  +    +   +F               EEH  H+     R    G++LS+KKA
Sbjct: 374 APSIFQRHMQNALRGLEEFCLVYVDDIIVFSDKEEEHYTHVLKVLKRIESLGIILSEKKA 433

Query: 186 EIAKERIDYLGLIIDKGIIELQSHIFEFSLEFPDQLENVKQVQSFLGHINYASQFIKNCA 365
            + KE+I++LGL ID+G    Q+HI E    FPD+LE+ KQ+Q FLG + YA  +I   A
Sbjct: 434 NLFKEKINFLGLEIDRGTHTPQNHILEHLHNFPDRLEDKKQLQRFLGVLTYADSYIPKLA 493

Query: 366 XXXXXXXXXXXXXXVFEWTNEDTNXXXXXXXXXXNLDKLPLPKEEDELYIKTDASDKYWG 545
                         V+ W   DT+          N  KL LPK+ED L I+TDASD +WG
Sbjct: 494 EKRKPLQVKLKKDQVWIWNQSDTDYVKKIKKGLVNFPKLYLPKKEDSLIIETDASDHFWG 553

Query: 546 AVLRRQ---GDDIILRYTS 593
            VL+ Q   G+++I RY+S
Sbjct: 554 GVLKAQTTEGNELICRYSS 572


>ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus]
 gb|AAM53128.1| ORFV [Mirabilis mosaic virus]
          Length = 674

 Score =  128 bits (322), Expect = 8e-31
 Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 3/199 (1%)
 Frame = +3

Query: 6   SPGIFQERLDKIFKDCHKFXXXXXXXXXXXXXXXEEHNKHLFIFATRSYENGLVLSKKKA 185
           +P IFQ  +    +   +F                +H  H+     R    G++LSKKKA
Sbjct: 372 APSIFQRHMQDALRGLEEFSLVYVDDIIVFSDNKNDHQDHVMKVLRRIESLGIILSKKKA 431

Query: 186 EIAKERIDYLGLIIDKGIIELQSHIFEFSLEFPDQLENVKQVQSFLGHINYASQFIKNCA 365
            + KE+I++LGL ID+G    Q+HI +    FPD++E+ KQ+Q FLG + YA  +I   A
Sbjct: 432 NLFKEKINFLGLEIDRGTHTPQNHILDHIHTFPDRIEDKKQLQRFLGVLTYADSYIPKLA 491

Query: 366 XXXXXXXXXXXXXXVFEWTNEDTNXXXXXXXXXXNLDKLPLPKEEDELYIKTDASDKYWG 545
                         V+ WT  DT+          N  KL LPK+ED L I+TDASD +WG
Sbjct: 492 EKRKPLQVKLKKDQVWIWTQSDTDYVKKIKKGLINFPKLYLPKKEDSLIIETDASDHFWG 551

Query: 546 AVLRRQ---GDDIILRYTS 593
            VL+ Q   G+++I RY+S
Sbjct: 552 GVLKAQTTEGEELICRYSS 570


>ref|YP_002519387.1| putative enzymatic polyprotein [Rudbeckia flower distortion virus]
 gb|ACL36982.1| putative enzymatic polyprotein [Rudbeckia flower distortion virus]
          Length = 701

 Score =  126 bits (316), Expect = 6e-30
 Identities = 72/199 (36%), Positives = 100/199 (50%), Gaps = 3/199 (1%)
 Frame = +3

Query: 6    SPGIFQERLDKIFKDCHKFXXXXXXXXXXXXXXXEEHNKHLFIFATRSYENGLVLSKKKA 185
            +PG+FQ  +D  FK+   F               +EH  HL     +  E G++LSKKKA
Sbjct: 404  APGLFQRFMDNSFKEYSAFCAVYVDDILVFSKTLDEHYDHLETVLRKCIETGIILSKKKA 463

Query: 186  EIAKERIDYLGLIIDKGIIELQSHIFEFSLEFPDQLENVKQVQSFLGHINYASQFIKNCA 365
            E+AK +I+YLG  I  G IELQSHI E    FP ++ + K +Q FLG + YA Q+I+  A
Sbjct: 464  EVAKTKINYLGFTISNGEIELQSHILENIKLFPSRIPDKKSLQRFLGILTYADQYIRKLA 523

Query: 366  XXXXXXXXXXXXXXVFEWTNEDTNXXXXXXXXXXNLDKLPLPKEEDELYIKTDASDKYWG 545
                          V+EW + DT              KL  P  ++ L I+TDAS ++W 
Sbjct: 524  EWRKPLQRKLKKDTVWEWNDSDTQYVEKFKRNLKEFPKLHHPLPDEYLIIETDASHEHWA 583

Query: 546  AVLRRQGDD---IILRYTS 593
             VL+ +G D    + RYTS
Sbjct: 584  GVLKSRGTDNLERLCRYTS 602


>gb|AMN10080.1| reverse transcriptase [Angelica bushy stunt virus]
          Length = 703

 Score =  125 bits (314), Expect = 1e-29
 Identities = 69/199 (34%), Positives = 100/199 (50%), Gaps = 3/199 (1%)
 Frame = +3

Query: 6    SPGIFQERLDKIFKDCHKFXXXXXXXXXXXXXXXEEHNKHLFIFATRSYENGLVLSKKKA 185
            +P IFQ  +        KF               E+H KHL     +  + G++LSKKKA
Sbjct: 407  APSIFQRHMQNALNSYEKFCCVYVDDILIFSDNEEDHQKHLAAVLKKCEQLGIILSKKKA 466

Query: 186  EIAKERIDYLGLIIDKGIIELQSHIFEFSLEFPDQLENVKQVQSFLGHINYASQFIKNCA 365
            ++ K +I++LGL ID+G    Q+HI E   +FPD++E+ KQ+Q FLG + YAS +I   A
Sbjct: 467  QLFKTKINFLGLEIDQGTHRPQNHILEHIAKFPDKIEDKKQLQRFLGILTYASDYIPGLA 526

Query: 366  XXXXXXXXXXXXXXVFEWTNEDTNXXXXXXXXXXNLDKLPLPKEEDELYIKTDASDKYWG 545
                           + WT  DT+          N  KL  P  +D+L I+TDAS  YWG
Sbjct: 527  SKRAPLQVKLKKDISWNWTASDTSYVAKLKKGLNNFPKLYHPLPDDKLIIETDASQDYWG 586

Query: 546  AVLR---RQGDDIILRYTS 593
             +L+     G+++I RY S
Sbjct: 587  GILKAANTNGEELICRYAS 605


>ref|YP_006907834.1| polyprotein [Horseradish latent virus]
 gb|AAW56089.1| polyprotein [Horseradish latent virus]
          Length = 679

 Score =  124 bits (312), Expect = 2e-29
 Identities = 70/204 (34%), Positives = 102/204 (50%), Gaps = 8/204 (3%)
 Frame = +3

Query: 6   SPGIFQERLDKIFKDCHKFXXXXXXXXXXXXXXXEEHNKHLFIFATRSYENGLVLSKKKA 185
           +P IFQ  +D+ FK   KF               + H  H+ +   + Y++G++LSKKKA
Sbjct: 379 APSIFQRHMDEAFKVFRKFCCIYVDDILVFSDNEQNHQLHVAMILQKCYQHGIILSKKKA 438

Query: 186 EIAKERIDYLGLIIDKGIIELQSHIFEFSLEFPDQLENVKQVQSFLGHINYASQFIKNCA 365
           ++ KERI++LGL ID+G    QSHI E   +FPD +E+  Q+Q FLG + YAS +I   A
Sbjct: 439 QLFKERINFLGLEIDQGTHRPQSHILEHIQKFPDIIESKLQLQRFLGVLTYASDYIPKLA 498

Query: 366 XXXXXXXXXXXXXXVFEWTNEDTNXXXXXXXXXXNLDKLPLPKEEDELYIKTDASDKYWG 545
                          + WT EDT               L  P  E++L I+TDASD YWG
Sbjct: 499 QIRKPLQAKLKENVQWRWTPEDTLYMKKVKKNLNGFPPLHHPLPEEKLIIETDASDNYWG 558

Query: 546 AVLR--------RQGDDIILRYTS 593
            +L+         +  +++ RY S
Sbjct: 559 GILKAIHIDLSTNESIELVCRYAS 582


>ref|YP_009165750.1| ORF5 [Atractylodes mild mottle virus]
 gb|ALD49090.1| ORF5 [Atractylodes mild mottle virus]
          Length = 679

 Score =  124 bits (312), Expect = 2e-29
 Identities = 69/200 (34%), Positives = 102/200 (51%), Gaps = 4/200 (2%)
 Frame = +3

Query: 6   SPGIFQERLDKIFKDCHKFXXXXXXXXXXXXXXXEEHNKHLFIFATRSYENGLVLSKKKA 185
           +P IFQ  ++  F++  +F                EH KH+     +    G++LSKKKA
Sbjct: 384 APSIFQRHMNNAFREFEEFCCVYVDDILVFSKNETEHRKHVIAILEQCKNLGIILSKKKA 443

Query: 186 EIAKERIDYLGLIIDKGIIELQSHIFEFSLEFPDQLENVKQVQSFLGHINYASQFIKNCA 365
            + K +I++LGL ID+G  + Q+HI E   +FPD+LE+ KQ+Q FLG + YAS +I   A
Sbjct: 444 HLFKTKINFLGLEIDQGSHKPQNHILEHIHKFPDRLEDKKQLQRFLGILTYASDYIPKLA 503

Query: 366 XXXXXXXXXXXXXXVFEWTNEDTNXXXXXXXXXXNLDKLPLPKEEDELYIKTDASDKYWG 545
                          + WT+ DT+          +   L  PKEED L I+ DASD +WG
Sbjct: 504 QIRKPFQAKLKKDVTWSWTDSDTSLMIKIKKGLKSFPTLYHPKEEDNLIIECDASDSFWG 563

Query: 546 AVLRR----QGDDIILRYTS 593
            +L+     +  + I RYTS
Sbjct: 564 GILKAKTIDEDKEYICRYTS 583


>sp|Q00962.1|POL_CAMVN RecName: Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase
 gb|AAA46358.1| reverse transcriptase [Cauliflower mosaic virus]
 prf||1909346E reverse transcriptase
          Length = 680

 Score =  123 bits (308), Expect = 6e-29
 Identities = 70/202 (34%), Positives = 104/202 (51%), Gaps = 6/202 (2%)
 Frame = +3

Query: 6   SPGIFQERLDKIFKDCHKFXXXXXXXXXXXXXXXEEHNKHLFIFATRSYENGLVLSKKKA 185
           +P IFQ  +D+ F+   KF               E+H  H+ +   +  ++G++LSKKKA
Sbjct: 380 APSIFQRHMDEAFRVFRKFCCVYVDDIVVFSNNEEDHLLHVAMILQKCNQHGIILSKKKA 439

Query: 186 EIAKERIDYLGLIIDKGIIELQSHIFEFSLEFPDQLENVKQVQSFLGHINYASQFIKNCA 365
           ++ K++I++LGL ID+G  + Q HI E   +FPD LE+ KQ+Q FLG + YAS +I N A
Sbjct: 440 QLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPNLA 499

Query: 366 XXXXXXXXXXXXXXVFEWTNEDTNXXXXXXXXXXNLDKLPLPKEEDELYIKTDASDKYWG 545
                          ++WT EDT               L  P  E++L I+TDASD YWG
Sbjct: 500 QMRQPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWG 559

Query: 546 AVLRR------QGDDIILRYTS 593
            +L+          ++I RY S
Sbjct: 560 GMLKAIKINEGTNTELICRYRS 581


>ref|YP_006607892.1| reverse transcriptase [Soybean Putnam virus]
 gb|AFP95350.1| reverse transcriptase [Soybean Putnam virus]
          Length = 699

 Score =  122 bits (305), Expect = 2e-28
 Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 4/200 (2%)
 Frame = +3

Query: 6    SPGIFQERLDKIFKDCHKFXXXXXXXXXXXXXXXEEHNKHLFIFATRSYENGLVLSKKKA 185
            +P IFQ  +   F+   KF               ++H++H+     R  + G++LSKKKA
Sbjct: 404  APSIFQRHMQNAFRSFEKFCCVYVDDILVFSDNEQDHHRHVMALLQRCNQLGIILSKKKA 463

Query: 186  EIAKERIDYLGLIIDKGIIELQSHIFEFSLEFPDQLENVKQVQSFLGHINYASQFIKNCA 365
            ++ +E+I++LGL ID+G  + Q+HI E   +FPD++E+ KQ+Q FLG + YAS +I   A
Sbjct: 464  QLFQEKINFLGLEIDQGSHKPQNHILEHIHKFPDKIEDKKQLQRFLGILTYASDYIPKLA 523

Query: 366  XXXXXXXXXXXXXXVFEWTNEDTNXXXXXXXXXXNLDKLPLPKEEDELYIKTDASDKYWG 545
                           + WT++D N          +   L  PK  D L I+TDAS  +WG
Sbjct: 524  EIRKPLQSKLKKDVPWTWTHDDINYMSKIKKNLKSFPTLYHPKLTDTLIIETDASGSFWG 583

Query: 546  AVLRRQGD----DIILRYTS 593
             +L+ + +    ++I RYTS
Sbjct: 584  GILKARTENSDSELICRYTS 603


>gb|AAD37341.1|AF140604_5 reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score =  121 bits (304), Expect = 2e-28
 Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 6/202 (2%)
 Frame = +3

Query: 6   SPGIFQERLDKIFKDCHKFXXXXXXXXXXXXXXXEEHNKHLFIFATRSYENGLVLSKKKA 185
           +P IFQ  +D+ F+   KF               E+H  H+ +   +  ++G++LSKKKA
Sbjct: 374 APSIFQRHMDEAFRVFRKFCCVYVDDILVFSNTEEDHLLHVAMILQKCNQHGIILSKKKA 433

Query: 186 EIAKERIDYLGLIIDKGIIELQSHIFEFSLEFPDQLENVKQVQSFLGHINYASQFIKNCA 365
           ++ K++I++LGL ID+G  + Q HI E   +FPD LE+ KQ+Q FLG + YAS +I   A
Sbjct: 434 QLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLA 493

Query: 366 XXXXXXXXXXXXXXVFEWTNEDTNXXXXXXXXXXNLDKLPLPKEEDELYIKTDASDKYWG 545
                          ++WT EDT               L  P  E++L I+TDASD YWG
Sbjct: 494 QIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHRPLPEEKLIIETDASDDYWG 553

Query: 546 AVLRR------QGDDIILRYTS 593
            +L+          ++I RY S
Sbjct: 554 GMLKAIQINEGTNTELICRYAS 575


>dbj|BAO53568.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score =  121 bits (304), Expect = 2e-28
 Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 6/202 (2%)
 Frame = +3

Query: 6   SPGIFQERLDKIFKDCHKFXXXXXXXXXXXXXXXEEHNKHLFIFATRSYENGLVLSKKKA 185
           +P IFQ  +D+ F+   KF               E+H  H+ +   +  ++G++LSKKKA
Sbjct: 374 APSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKA 433

Query: 186 EIAKERIDYLGLIIDKGIIELQSHIFEFSLEFPDQLENVKQVQSFLGHINYASQFIKNCA 365
           ++ K++I++LGL ID+G  + Q HI E   +FPD LE+ KQ+Q FLG + YAS +I   A
Sbjct: 434 QLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLA 493

Query: 366 XXXXXXXXXXXXXXVFEWTNEDTNXXXXXXXXXXNLDKLPLPKEEDELYIKTDASDKYWG 545
                          ++WT EDT               L  P  E++L I+TDASD YWG
Sbjct: 494 QIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWG 553

Query: 546 AVLRR------QGDDIILRYTS 593
            +L+          ++I RY S
Sbjct: 554 GMLKAIKINEGSNTELICRYAS 575


>dbj|BAO53547.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score =  121 bits (304), Expect = 2e-28
 Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 6/202 (2%)
 Frame = +3

Query: 6   SPGIFQERLDKIFKDCHKFXXXXXXXXXXXXXXXEEHNKHLFIFATRSYENGLVLSKKKA 185
           +P IFQ  +D+ F+   KF               E+H  H+ +   +  ++G++LSKKKA
Sbjct: 374 APSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKA 433

Query: 186 EIAKERIDYLGLIIDKGIIELQSHIFEFSLEFPDQLENVKQVQSFLGHINYASQFIKNCA 365
           ++ K++I++LGL ID+G  + Q HI E   +FPD LE+ KQ+Q FLG + YAS +I   A
Sbjct: 434 QLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYISKLA 493

Query: 366 XXXXXXXXXXXXXXVFEWTNEDTNXXXXXXXXXXNLDKLPLPKEEDELYIKTDASDKYWG 545
                          ++WT EDT               L  P  E++L I+TDASD YWG
Sbjct: 494 QIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWG 553

Query: 546 AVLRR------QGDDIILRYTS 593
            +L+          ++I RY S
Sbjct: 554 GMLKAIKINEGTNTELICRYAS 575


>dbj|BAO53435.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score =  121 bits (304), Expect = 2e-28
 Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 6/202 (2%)
 Frame = +3

Query: 6   SPGIFQERLDKIFKDCHKFXXXXXXXXXXXXXXXEEHNKHLFIFATRSYENGLVLSKKKA 185
           +P IFQ  +D+ F+   KF               E+H  H+ +   +  ++G++LSKKKA
Sbjct: 374 APSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKA 433

Query: 186 EIAKERIDYLGLIIDKGIIELQSHIFEFSLEFPDQLENVKQVQSFLGHINYASQFIKNCA 365
           ++ K++I++LGL ID+G  + Q HI E   +FPD LE+ KQ+Q FLG + YAS +I   A
Sbjct: 434 QLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLA 493

Query: 366 XXXXXXXXXXXXXXVFEWTNEDTNXXXXXXXXXXNLDKLPLPKEEDELYIKTDASDKYWG 545
                          ++WT EDT               L  P  E++L I+TDASD YWG
Sbjct: 494 QIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDNYWG 553

Query: 546 AVLRR------QGDDIILRYTS 593
            +L+          ++I RY S
Sbjct: 554 GMLKAIKINEGTNTELICRYAS 575


>sp|P03556.1|POL_CAMVD RecName: Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase
          Length = 674

 Score =  121 bits (303), Expect = 3e-28
 Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 6/202 (2%)
 Frame = +3

Query: 6   SPGIFQERLDKIFKDCHKFXXXXXXXXXXXXXXXEEHNKHLFIFATRSYENGLVLSKKKA 185
           +P IFQ  +D+ F+   KF               E+H  H+ +   +  ++G++LSKKKA
Sbjct: 374 APSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKA 433

Query: 186 EIAKERIDYLGLIIDKGIIELQSHIFEFSLEFPDQLENVKQVQSFLGHINYASQFIKNCA 365
           ++ K++I++LGL ID+G  + Q HI E   +FPD LE+ KQ+Q FLG + YAS +I   A
Sbjct: 434 QLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLA 493

Query: 366 XXXXXXXXXXXXXXVFEWTNEDTNXXXXXXXXXXNLDKLPLPKEEDELYIKTDASDKYWG 545
                          ++WT EDT               L  P  E++L I+TDASD YWG
Sbjct: 494 QIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWG 553

Query: 546 AVLRR------QGDDIILRYTS 593
            +L+          ++I RY S
Sbjct: 554 GMLKAIKINEGTNTELICRYAS 575


>gb|AHA91342.1| reverse transcriptase [Cauliflower mosaic virus]
 gb|AHA91352.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score =  121 bits (303), Expect = 3e-28
 Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 6/202 (2%)
 Frame = +3

Query: 6   SPGIFQERLDKIFKDCHKFXXXXXXXXXXXXXXXEEHNKHLFIFATRSYENGLVLSKKKA 185
           +P IFQ  +D+ F+   KF               E+H  H+ +   +  ++G++LSKKKA
Sbjct: 374 APSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKA 433

Query: 186 EIAKERIDYLGLIIDKGIIELQSHIFEFSLEFPDQLENVKQVQSFLGHINYASQFIKNCA 365
           ++ K++I++LGL ID+G  + Q HI E   +FPD LE+ KQ+Q FLG + YAS +I   A
Sbjct: 434 QLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLA 493

Query: 366 XXXXXXXXXXXXXXVFEWTNEDTNXXXXXXXXXXNLDKLPLPKEEDELYIKTDASDKYWG 545
                          ++WT EDT               L  P  E++L I+TDASD YWG
Sbjct: 494 QIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWG 553

Query: 546 AVLRR------QGDDIILRYTS 593
            +L+          ++I RY S
Sbjct: 554 GMLKAIKINEGANTELICRYAS 575


>gb|AHA91338.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score =  121 bits (303), Expect = 3e-28
 Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 6/202 (2%)
 Frame = +3

Query: 6   SPGIFQERLDKIFKDCHKFXXXXXXXXXXXXXXXEEHNKHLFIFATRSYENGLVLSKKKA 185
           +P IFQ  +D+ F+   KF               E+H  H+ +   +  ++G++LSKKKA
Sbjct: 374 APSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKA 433

Query: 186 EIAKERIDYLGLIIDKGIIELQSHIFEFSLEFPDQLENVKQVQSFLGHINYASQFIKNCA 365
           ++ K++I++LGL ID+G  + Q HI E   +FPD LE+ KQ+Q FLG + YAS +I   A
Sbjct: 434 QLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLA 493

Query: 366 XXXXXXXXXXXXXXVFEWTNEDTNXXXXXXXXXXNLDKLPLPKEEDELYIKTDASDKYWG 545
                          ++WT EDT               L  P  E++L I+TDASD YWG
Sbjct: 494 QIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWG 553

Query: 546 AVLRR------QGDDIILRYTS 593
            +L+          ++I RY S
Sbjct: 554 GMLKAIKINEGTNTELICRYAS 575


>gb|AHA91331.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score =  121 bits (303), Expect = 3e-28
 Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 6/202 (2%)
 Frame = +3

Query: 6   SPGIFQERLDKIFKDCHKFXXXXXXXXXXXXXXXEEHNKHLFIFATRSYENGLVLSKKKA 185
           +P IFQ  +D+ F+   KF               E+H  H+ +   +  ++G++LSKKKA
Sbjct: 374 APSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKA 433

Query: 186 EIAKERIDYLGLIIDKGIIELQSHIFEFSLEFPDQLENVKQVQSFLGHINYASQFIKNCA 365
           ++ K++I++LGL ID+G  + Q HI E   +FPD LE+ KQ+Q FLG + YAS +I   A
Sbjct: 434 QLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLA 493

Query: 366 XXXXXXXXXXXXXXVFEWTNEDTNXXXXXXXXXXNLDKLPLPKEEDELYIKTDASDKYWG 545
                          ++WT EDT               L  P  E++L I+TDASD YWG
Sbjct: 494 QIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWG 553

Query: 546 AVLRR------QGDDIILRYTS 593
            +L+          ++I RY S
Sbjct: 554 GMLKAIKINEGANTELICRYAS 575


>gb|AHA91317.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score =  121 bits (303), Expect = 3e-28
 Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 6/202 (2%)
 Frame = +3

Query: 6   SPGIFQERLDKIFKDCHKFXXXXXXXXXXXXXXXEEHNKHLFIFATRSYENGLVLSKKKA 185
           +P IFQ  +D+ F+   KF               E+H  H+ +   +  ++G++LSKKKA
Sbjct: 374 APSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKA 433

Query: 186 EIAKERIDYLGLIIDKGIIELQSHIFEFSLEFPDQLENVKQVQSFLGHINYASQFIKNCA 365
           ++ K++I++LGL ID+G  + Q HI E   +FPD LE+ KQ+Q FLG + YAS +I   A
Sbjct: 434 QLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLA 493

Query: 366 XXXXXXXXXXXXXXVFEWTNEDTNXXXXXXXXXXNLDKLPLPKEEDELYIKTDASDKYWG 545
                          ++WT EDT               L  P  E++L I+TDASD YWG
Sbjct: 494 QIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWG 553

Query: 546 AVLRR------QGDDIILRYTS 593
            +L+          ++I RY S
Sbjct: 554 GMLKAIKINEGANTELICRYAS 575