BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00027701
         (580 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposo...   162   6e-44
gb|PNX93473.1| retrovirus-related Pol polyprotein from transposo...   164   3e-43
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo...   163   5e-43
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo...   163   5e-43
dbj|GAU44436.1| hypothetical protein TSUD_129300 [Trifolium subt...   160   5e-42
dbj|GAU32278.1| hypothetical protein TSUD_62940 [Trifolium subte...   160   8e-42
gb|KYP34307.1| Retrovirus-related Pol polyprotein from transposo...   159   1e-41
gb|PNX95703.1| retrovirus-related Pol polyprotein from transposo...   157   9e-41
gb|PNY02430.1| retrovirus-related Pol polyprotein from transposo...   156   2e-40
gb|PNX92571.1| histone deacetylase [Trifolium pratense]               156   2e-40
dbj|GAU34785.1| hypothetical protein TSUD_205890 [Trifolium subt...   155   2e-40
gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposo...   155   2e-40
dbj|GAU29466.1| hypothetical protein TSUD_65010 [Trifolium subte...   155   3e-40
gb|PNX91972.1| retrovirus-related Pol polyprotein from transposo...   155   3e-40
gb|KYP50090.1| Retrovirus-related Pol polyprotein from transposo...   155   4e-40
gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposo...   154   6e-40
gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposo...   154   6e-40
gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposo...   153   1e-39
gb|PNX93462.1| histone deacetylase, partial [Trifolium pratense]      153   1e-39
dbj|GAU13081.1| hypothetical protein TSUD_173810 [Trifolium subt...   152   3e-39

>gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 537

 Score =  162 bits (411), Expect = 6e-44
 Identities = 91/199 (45%), Positives = 117/199 (58%), Gaps = 7/199 (3%)
 Frame = +2

Query: 5   ESRFPYNDLFP*QGTAPPKCSTPVNL------SPLP-ESPTVXXXXXXXXXXXXXXXXXX 163
           E+RFPY  LFP   T PP  S PV L       P+P +SP +                  
Sbjct: 319 ETRFPYPSLFPASATNPPTSSIPVPLVITSLQPPMPTDSPPLISPNTSPT---------- 368

Query: 164 XHINQTPHPTINSPEHTIPSTLPTVTLPTNQPNSATTTNTQPHNTHAMQTRSKSGITLPR 343
                T + T++S   T  S   +  LPT+  + +T   T   N H+M TR+K+GI  P 
Sbjct: 369 -----TSNSTLSSSSATTSSVSASTLLPTSSTSLSTHDTTPITNIHSMTTRAKAGIVKPC 423

Query: 344 LNPSVFLTTSEPTTTEQSLKDPNWLAVMQAEYTALQNNKTWTLVPLPPNRKAIGCKWVFR 523
           L P++ LT +EP +T+Q+L +  WLA M+ EY AL NN TWTLV LPPN+ AIGCKWVFR
Sbjct: 424 LQPTLLLTHTEPKSTKQALANDTWLAAMKQEYNALLNNGTWTLVSLPPNKTAIGCKWVFR 483

Query: 524 VKENADGTVSKYKARLVAK 580
           +KEN+DGTV+KYKARLVAK
Sbjct: 484 IKENSDGTVNKYKARLVAK 502


>gb|PNX93473.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1181

 Score =  164 bits (414), Expect = 3e-43
 Identities = 92/204 (45%), Positives = 119/204 (58%), Gaps = 11/204 (5%)
 Frame = +2

Query: 2    NESRFPYNDLFP*QGTAPPKCSTPVNLSPLPESPTVXXXXXXXXXXXXXXXXXXXHINQ- 178
            NE+RFPYN LFP   T+       +   P+P+ P                     H +Q 
Sbjct: 542  NETRFPYNLLFPVSATSS------LIPDPIPDIPISKLPIDSHNQTILPTLTNHSHQSQN 595

Query: 179  --TPHPTIN--------SPEHTIPSTLPTVTLPTNQPNSATTTNTQPHNTHAMQTRSKSG 328
              T HP+++        SP + I     T+   T  P + + + T+  NTHAMQTR+KSG
Sbjct: 596  DDTTHPSVSDALSSAQPSPTNNIVPPDITIHHLTEIPVNNSVSPTKLTNTHAMQTRAKSG 655

Query: 329  ITLPRLNPSVFLTTSEPTTTEQSLKDPNWLAVMQAEYTALQNNKTWTLVPLPPNRKAIGC 508
            I  P+ NP + LT+SEP T +Q+LKDP W   M+ E+ ALQ N+TWTLV LPPNRKAIGC
Sbjct: 656  IVRPKQNPKLLLTSSEPKTVKQALKDPQWYTAMKEEFDALQRNQTWTLVKLPPNRKAIGC 715

Query: 509  KWVFRVKENADGTVSKYKARLVAK 580
            KWVFR KEN DG+++K KARLVAK
Sbjct: 716  KWVFRTKENPDGSINKLKARLVAK 739


>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1073

 Score =  163 bits (413), Expect = 5e-43
 Identities = 90/193 (46%), Positives = 115/193 (59%)
 Frame = +2

Query: 2    NESRFPYNDLFP*QGTAPPKCSTPVNLSPLPESPTVXXXXXXXXXXXXXXXXXXXHINQT 181
            NE++FPY DLF    +       P+++ PL  +PT                     I+ +
Sbjct: 443  NETKFPYKDLF--SSSKASDSQLPISV-PLTINPTPTPTHATRLTSPNPPTTSPSLISDS 499

Query: 182  PHPTINSPEHTIPSTLPTVTLPTNQPNSATTTNTQPHNTHAMQTRSKSGITLPRLNPSVF 361
              P  N+  HT PSTL   T    +P+S+   +  PHN H M TR+K GI  PRL P++ 
Sbjct: 500  YSP--NTAAHTSPSTLSIPTSSNLEPSSSPIIH--PHNVHPMTTRAKDGIVKPRLQPTLL 555

Query: 362  LTTSEPTTTEQSLKDPNWLAVMQAEYTALQNNKTWTLVPLPPNRKAIGCKWVFRVKENAD 541
            LT  EP TT+Q+L +P W A MQ EY AL +N TW+LVPLPP+R AIGCKWVFRVKEN +
Sbjct: 556  LTQVEPKTTKQALSNPTWSAAMQTEYNALLHNNTWSLVPLPPHRTAIGCKWVFRVKENPN 615

Query: 542  GTVSKYKARLVAK 580
            G+V KYKARLVAK
Sbjct: 616  GSVQKYKARLVAK 628


>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1408

 Score =  163 bits (413), Expect = 5e-43
 Identities = 90/193 (46%), Positives = 115/193 (59%)
 Frame = +2

Query: 2    NESRFPYNDLFP*QGTAPPKCSTPVNLSPLPESPTVXXXXXXXXXXXXXXXXXXXHINQT 181
            NE++FPY DLF    +       P+++ PL  +PT                     I+ +
Sbjct: 778  NETKFPYKDLF--SSSKASDSQLPISV-PLTINPTPTPTHATRLTSPNPPTTSPSLISDS 834

Query: 182  PHPTINSPEHTIPSTLPTVTLPTNQPNSATTTNTQPHNTHAMQTRSKSGITLPRLNPSVF 361
              P  N+  HT PSTL   T    +P+S+   +  PHN H M TR+K GI  PRL P++ 
Sbjct: 835  YSP--NTAAHTSPSTLSIPTSSNLEPSSSPIIH--PHNVHPMTTRAKDGIVKPRLQPTLL 890

Query: 362  LTTSEPTTTEQSLKDPNWLAVMQAEYTALQNNKTWTLVPLPPNRKAIGCKWVFRVKENAD 541
            LT  EP TT+Q+L +P W A MQ EY AL +N TW+LVPLPP+R AIGCKWVFRVKEN +
Sbjct: 891  LTQVEPKTTKQALSNPTWSAAMQTEYNALLHNNTWSLVPLPPHRTAIGCKWVFRVKENPN 950

Query: 542  GTVSKYKARLVAK 580
            G+V KYKARLVAK
Sbjct: 951  GSVQKYKARLVAK 963


>dbj|GAU44436.1| hypothetical protein TSUD_129300 [Trifolium subterraneum]
          Length = 999

 Score =  160 bits (405), Expect = 5e-42
 Identities = 89/196 (45%), Positives = 114/196 (58%), Gaps = 3/196 (1%)
 Frame = +2

Query: 2    NESRFPYNDLFP*QG--TAPPKCSTPVNLSPLPESPTVXXXXXXXXXXXXXXXXXXXHIN 175
            NESRFPY+ LF  +   T+PP  + P++  PL                           N
Sbjct: 656  NESRFPYHILFSPERATTSPPTQNVPISTLPL---------------------------N 688

Query: 176  QTPHPTINSPEHTIPSTLPTVTLPTNQPNSATTT-NTQPHNTHAMQTRSKSGITLPRLNP 352
             + HPT+ +P        PT T P +  ++ +      P N H MQTR+KSGI+LPR+ P
Sbjct: 689  PSNHPTLITPSP------PTSTKPISSDSTKSIIIPPNPTNNHPMQTRAKSGISLPRITP 742

Query: 353  SVFLTTSEPTTTEQSLKDPNWLAVMQAEYTALQNNKTWTLVPLPPNRKAIGCKWVFRVKE 532
             + LT SEP T +Q+L+DP W + M AE+ ALQ N+TW LVPLP NR AIGCKWVFR KE
Sbjct: 743  KLLLTQSEPRTVKQALQDPKWYSAMTAEFEALQRNQTWNLVPLPKNRTAIGCKWVFRTKE 802

Query: 533  NADGTVSKYKARLVAK 580
            N D T++KYKARLVAK
Sbjct: 803  NPDDTINKYKARLVAK 818


>dbj|GAU32278.1| hypothetical protein TSUD_62940 [Trifolium subterraneum]
          Length = 1409

 Score =  160 bits (404), Expect = 8e-42
 Identities = 91/213 (42%), Positives = 116/213 (54%), Gaps = 20/213 (9%)
 Frame = +2

Query: 2    NESRFPYNDLFP*QGTAPPKCSTPVNLSPLPESPTVXXXXXXXXXXXXXXXXXXXHINQT 181
            NESRFPY  LFP   +A    +  + L+ LP                         +   
Sbjct: 797  NESRFPYESLFPTPNSALSNPTPDIPLTTLP-----------------IGTQNENILTNI 839

Query: 182  PHPTINSPEHTIPSTLPTVTLPTNQPNSAT--TTNTQPH------------------NTH 301
             +PT  S     PST P  TL   QP++    +T++ P+                  NTH
Sbjct: 840  QNPTDQSSNTNQPSTSPPTTLQPTQPDTELPHSTSSNPNSDPLTLSPSFHPMPSKTTNTH 899

Query: 302  AMQTRSKSGITLPRLNPSVFLTTSEPTTTEQSLKDPNWLAVMQAEYTALQNNKTWTLVPL 481
             MQTR KSG+ LP++NP + LT +EP TT+Q+L+D  WL+ M  E+ AL+ NKTWTLVPL
Sbjct: 900  PMQTRVKSGLILPKINPKLLLTHTEPRTTKQALQDRKWLSAMTEEFEALKRNKTWTLVPL 959

Query: 482  PPNRKAIGCKWVFRVKENADGTVSKYKARLVAK 580
            P NR  IGCKWVFR KEN DGT++KYKARLVAK
Sbjct: 960  PNNRDVIGCKWVFRTKENPDGTINKYKARLVAK 992


>gb|KYP34307.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1102

 Score =  159 bits (402), Expect = 1e-41
 Identities = 90/206 (43%), Positives = 115/206 (55%), Gaps = 13/206 (6%)
 Frame = +2

Query: 2    NESRFPYNDLFP*Q--GTAPPKCSTPVNLSPLPESPTVXXXXXXXXXXXXXXXXXXXHIN 175
            NE++FPY +LF       +    S P+ ++P P +PT                       
Sbjct: 717  NETKFPYKELFTSSKASVSHHPISVPLTINPTP-TPTHETRPT----------------- 758

Query: 176  QTPHPTINSPEHTIPSTLPTVTLPTNQPNSA---TTTNTQP--------HNTHAMQTRSK 322
             +P+P   SP  T  S  P    P   P++    T++N +P        HN H M TR+K
Sbjct: 759  -SPNPPATSPSLTSDSYSPNTAAPDTSPSTLSIPTSSNLEPSSSPVIHPHNVHPMTTRAK 817

Query: 323  SGITLPRLNPSVFLTTSEPTTTEQSLKDPNWLAVMQAEYTALQNNKTWTLVPLPPNRKAI 502
             GI  PRL P++ LT  EP TT+Q+L +P W A MQ EY AL +N TW+LVPLPP+R AI
Sbjct: 818  DGIVKPRLQPTLLLTQVEPKTTKQALSNPTWSAAMQTEYNALLHNNTWSLVPLPPHRTAI 877

Query: 503  GCKWVFRVKENADGTVSKYKARLVAK 580
            GCKWVFRVKEN +GTV KYKARLVAK
Sbjct: 878  GCKWVFRVKENPNGTVQKYKARLVAK 903


>gb|PNX95703.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 975

 Score =  157 bits (396), Expect = 9e-41
 Identities = 90/208 (43%), Positives = 116/208 (55%), Gaps = 15/208 (7%)
 Frame = +2

Query: 2   NESRFPYNDLFP*QGTAPPKCSTPVNLSPLPESPTVXXXXXXXXXXXXXXXXXXXHINQT 181
           NES+FPY  +F    +        V    LP  P+                         
Sbjct: 336 NESKFPYTSMFCEHSSPLMSSVRDVPTKILPIEPSSFPNHNITPISP-----------DN 384

Query: 182 PHPTINS---PEHTIPSTLPTVTLPTNQPNSATTTN------------TQPHNTHAMQTR 316
           P PT ++      T+P+T+ T+    N P S T +N            T P N H MQTR
Sbjct: 385 PIPTTSTILPSSDTLPTTVETINHAPNPPPSLTISNSFNNPPLHPNKTTVPSNCHNMQTR 444

Query: 317 SKSGITLPRLNPSVFLTTSEPTTTEQSLKDPNWLAVMQAEYTALQNNKTWTLVPLPPNRK 496
           SKSGI LP+ +P+V LT SEP + +Q+L+DP WL  MQ+E+ ALQ N TW+LVPLP NRK
Sbjct: 445 SKSGIFLPK-HPTVLLTHSEPKSVKQALQDPKWLTAMQSEFDALQQNNTWSLVPLPANRK 503

Query: 497 AIGCKWVFRVKENADGTVSKYKARLVAK 580
           AIGCKW+FR+KEN DG+++KYKARLVAK
Sbjct: 504 AIGCKWIFRIKENPDGSINKYKARLVAK 531


>gb|PNY02430.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Trifolium pratense]
          Length = 1064

 Score =  156 bits (394), Expect = 2e-40
 Identities = 90/201 (44%), Positives = 112/201 (55%), Gaps = 8/201 (3%)
 Frame = +2

Query: 2    NESRFPYNDLFP*QGTAPPKCSTPVNLSPLPESPTVXXXXXXXXXXXXXXXXXXXHINQT 181
            NESRFP+ DLF    +  P  S+ V LSPL   P+                     I  +
Sbjct: 836  NESRFPFIDLFTSPHSVVPSKSSAVTLSPLVHHPS---------HSPSPTSSPSPSIPNS 886

Query: 182  PHPTINSPEHTIPSTLPTVTLPTNQ--------PNSATTTNTQPHNTHAMQTRSKSGITL 337
            P P+ +SP   +  T P VT P +         P  A     +P N H M TR+K G T 
Sbjct: 887  PPPSASSP--VVSPTSPPVTSPESLSPPNAPPIPPKAKPVVHKPSNLHPMLTRAKDGFTQ 944

Query: 338  PRLNPSVFLTTSEPTTTEQSLKDPNWLAVMQAEYTALQNNKTWTLVPLPPNRKAIGCKWV 517
            PRL P + LT  EP + +Q+L+ P W   MQAEY AL  N TWTLVPLP +R +IGCKWV
Sbjct: 945  PRLEPRLLLTHIEPASVKQALQVPEWKTAMQAEYDALLANNTWTLVPLPSDRSSIGCKWV 1004

Query: 518  FRVKENADGTVSKYKARLVAK 580
            FRVK+N+DGT++KYKARLVAK
Sbjct: 1005 FRVKQNSDGTLNKYKARLVAK 1025


>gb|PNX92571.1| histone deacetylase [Trifolium pratense]
          Length = 1488

 Score =  156 bits (394), Expect = 2e-40
 Identities = 93/212 (43%), Positives = 118/212 (55%), Gaps = 19/212 (8%)
 Frame = +2

Query: 2    NESRFPYNDLFP*Q-GTAPPKCSTPVNLSPLPESPTVXXXXXXXXXXXXXXXXXXXHINQ 178
            NESRFPY +LFP   G++    S    L PLP  P++                   HI+ 
Sbjct: 844  NESRFPYKELFPISSGSSHSPPSKSFKLPPLPTFPSITTDITSPLPPTAP------HISS 897

Query: 179  TPHPTINSPE---HTIPSTLPTVTLPTNQPNSATTTNTQPH---------------NTHA 304
             P P IN P      + +T    + P + P+ +T ++T  H               N H 
Sbjct: 898  PPTP-INDPSPPNSPLSATASDQSSPLSTPSPSTASSTSHHVSIPPRAVPVPIIPVNAHN 956

Query: 305  MQTRSKSGITLPRLNPSVFLTTSEPTTTEQSLKDPNWLAVMQAEYTALQNNKTWTLVPLP 484
            MQTR+KSG   P+L     +  SEP + +Q+L DP+W A MQ EY AL NN TWTLVPLP
Sbjct: 957  MQTRAKSGFKQPKL----LVAHSEPKSVKQALLDPSWHAAMQTEYDALLNNNTWTLVPLP 1012

Query: 485  PNRKAIGCKWVFRVKENADGTVSKYKARLVAK 580
            P+R+AIGCKWVFR+KEN DGTV+KYKARLVAK
Sbjct: 1013 PDRQAIGCKWVFRIKENPDGTVNKYKARLVAK 1044


>dbj|GAU34785.1| hypothetical protein TSUD_205890 [Trifolium subterraneum]
          Length = 888

 Score =  155 bits (393), Expect = 2e-40
 Identities = 89/196 (45%), Positives = 112/196 (57%), Gaps = 3/196 (1%)
 Frame = +2

Query: 2    NESRFPYNDLFP*QGTAPPKCSTPVNLSPLPESPTVXXXXXXXXXXXXXXXXXXXHINQT 181
            NE RFPY  LFP   T     STP+   PL   P                      I+QT
Sbjct: 647  NEQRFPYKILFP---TQTSSLSTPIQDVPLSTLPVGTHNQTEITKV----------ISQT 693

Query: 182  PHPTINSPEHTIPSTLPTVTLPTNQPNSAT---TTNTQPHNTHAMQTRSKSGITLPRLNP 352
             +PT   P        P + LP   P  A    + +++  N H M+TR+KSGI+LP+  P
Sbjct: 694  SNPTSTDP--------PLLNLPQPAPPIAEQPPSISSKLINNHPMKTRAKSGISLPKPPP 745

Query: 353  SVFLTTSEPTTTEQSLKDPNWLAVMQAEYTALQNNKTWTLVPLPPNRKAIGCKWVFRVKE 532
            ++ LT +EP T +Q+L+DP WL+ M  E+ AL+NN TW LVPLP NR AIGCKWVFR KE
Sbjct: 746  TLLLTHTEPRTVKQALQDPKWLSAMTTEFEALKNNHTWNLVPLPQNRTAIGCKWVFRTKE 805

Query: 533  NADGTVSKYKARLVAK 580
            N DGT++KYKARLVAK
Sbjct: 806  NPDGTINKYKARLVAK 821


>gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1268

 Score =  155 bits (393), Expect = 2e-40
 Identities = 90/198 (45%), Positives = 118/198 (59%), Gaps = 5/198 (2%)
 Frame = +2

Query: 2    NESRFPYNDLFP*QGTAPPKCSTPVNLSPLPESPTVXXXXXXXXXXXXXXXXXXXHINQT 181
            NE+RFPY DLF    T  P  S    L+P    P                      +++T
Sbjct: 697  NETRFPYLDLFQHTSTPVPSPSQYFTLNPDLSPPCSHTTASSLPFIP---------VSET 747

Query: 182  PHPTINSPEHTIPSTLPTVTLPTNQPNS---ATTTNTQPH--NTHAMQTRSKSGITLPRL 346
             +   +S +  I S  PTV+   + P+S   +T TNT     N H+MQTRSKSGI  P++
Sbjct: 748  SN---HSGQDNILSVSPTVSQFNSTPSSPVSSTPTNTVSRTINNHSMQTRSKSGIYKPKM 804

Query: 347  NPSVFLTTSEPTTTEQSLKDPNWLAVMQAEYTALQNNKTWTLVPLPPNRKAIGCKWVFRV 526
             PS+FL  SEP   +Q+L DP+W + M+ EY+AL  N TW LVPLP NR+A+GCKWVFRV
Sbjct: 805  PPSLFLAHSEPKNVKQALSDPDWFSAMKQEYSALLQNHTWDLVPLPSNRQAVGCKWVFRV 864

Query: 527  KENADGTVSKYKARLVAK 580
            KENADG+++K+KARLVAK
Sbjct: 865  KENADGSINKFKARLVAK 882


>dbj|GAU29466.1| hypothetical protein TSUD_65010 [Trifolium subterraneum]
          Length = 1362

 Score =  155 bits (392), Expect = 3e-40
 Identities = 92/225 (40%), Positives = 123/225 (54%), Gaps = 32/225 (14%)
 Frame = +2

Query: 2    NESRFPYNDLFP*QGTAP------PKCS------TPVNLSPLPESPTVXXXXXXXXXXXX 145
            NESRFPYNDLFP   T        P  S      T ++ +P P SPT             
Sbjct: 812  NESRFPYNDLFPSAPTPSVISHDDPTLSIFLSLPTHIHDNPSP-SPTTSNSLPNFVPHSP 870

Query: 146  XXXXXXXHINQTPHPTINSPEHTIPSTLPT----VTLPTNQPNSATTTNT---------- 283
                   +++ +  PT  S     P   P+    V  P+   +S + T+T          
Sbjct: 871  SLPQLSNYVSHSTPPTHASSHSAAPVLSPSPITIVPPPSTDTSSVSPTSTASSVSLQEPP 930

Query: 284  ------QPHNTHAMQTRSKSGITLPRLNPSVFLTTSEPTTTEQSLKDPNWLAVMQAEYTA 445
                   P NTH+M TR K GI  PRL+P++ LT  EPT+ +Q+++ P+WL  MQ+EY A
Sbjct: 931  IVPHRIHPQNTHSMSTRGKLGIVQPRLHPTLLLTHVEPTSYKQAMQHPDWLKAMQSEYGA 990

Query: 446  LQNNKTWTLVPLPPNRKAIGCKWVFRVKENADGTVSKYKARLVAK 580
            L +N TW+LVPLP NR+AIGCKWVFR+K+N DG+++KYKARLVAK
Sbjct: 991  LMSNNTWSLVPLPANRQAIGCKWVFRLKQNPDGSINKYKARLVAK 1035


>gb|PNX91972.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1516

 Score =  155 bits (392), Expect = 3e-40
 Identities = 90/201 (44%), Positives = 114/201 (56%), Gaps = 8/201 (3%)
 Frame = +2

Query: 2    NESRFPYNDLFP*QGTAPPKCSTPVNLSPLPESPTVXXXXXXXXXXXXXXXXXXXHINQT 181
            NE RFPY  LF  Q +A    +  V +S LP S  +                    +   
Sbjct: 871  NEHRFPYKSLFSTQDSALSDITLDVPISTLPIS--IQNQTITTNTSSPITQPSNTTMLSP 928

Query: 182  PHPTINSPEHTIPSTL--PTVTLPTNQPNSAT------TTNTQPHNTHAMQTRSKSGITL 337
            P+PT+  P  +   T   P+ T  T   +S T      T  + P N H MQTR+KSGI +
Sbjct: 929  PNPTLTQPTDSNTKTPHNPSSTSITTHSDSPTQSSPSPTIPSLPTNNHRMQTRAKSGI-I 987

Query: 338  PRLNPSVFLTTSEPTTTEQSLKDPNWLAVMQAEYTALQNNKTWTLVPLPPNRKAIGCKWV 517
            PR+NP + LT +EP T +Q+L+DP WL  M  E+ AL+ N TWTLVPLP +R AIGCKWV
Sbjct: 988  PRINPKLLLTHTEPRTVKQALQDPKWLTAMTEEFEALKRNHTWTLVPLPKHRSAIGCKWV 1047

Query: 518  FRVKENADGTVSKYKARLVAK 580
            FR KEN DGT++KYKARLVAK
Sbjct: 1048 FRTKENPDGTINKYKARLVAK 1068


>gb|KYP50090.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 889

 Score =  155 bits (391), Expect = 4e-40
 Identities = 91/206 (44%), Positives = 116/206 (56%), Gaps = 13/206 (6%)
 Frame = +2

Query: 2    NESRFPYNDLF---P*QGTAP-------PKCSTPVNLSP-LPESPTVXXXXXXXXXXXXX 148
            NE RFPY DLF   P Q  +P       P  S P N SP L + P +             
Sbjct: 437  NEHRFPYTDLFQPSPTQNVSPCQYFTLNPDLSPPCNTSPVLSQQPPLFSQIGDP------ 490

Query: 149  XXXXXXHINQTPHPTINSPEHTIPSTLPTVTLPTNQPNSATTTNTQPH--NTHAMQTRSK 322
                    + + +PT++S ++  PS+  + +   +   S+T T + P   N H MQTRSK
Sbjct: 491  --------SVSINPTVSSSQNVSPSSHESSSHNVSSHTSSTDTESIPRTINNHPMQTRSK 542

Query: 323  SGITLPRLNPSVFLTTSEPTTTEQSLKDPNWLAVMQAEYTALQNNKTWTLVPLPPNRKAI 502
             G   PRL+PS+FL  SEP   +Q+L DPNW + MQ EY AL  N TW LV LP +RKA+
Sbjct: 543  FGFHNPRLHPSLFLAHSEPKNVKQALADPNWFSAMQQEYNALMLNHTWDLVSLPSDRKAV 602

Query: 503  GCKWVFRVKENADGTVSKYKARLVAK 580
            GCKWVFRVKEN DG++ K KARLVAK
Sbjct: 603  GCKWVFRVKENVDGSIDKLKARLVAK 628


>gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1279

 Score =  154 bits (390), Expect = 6e-40
 Identities = 90/209 (43%), Positives = 114/209 (54%), Gaps = 16/209 (7%)
 Frame = +2

Query: 2    NESRFPYNDLFP---*QGTAP-----------PKCSTPVNLSPLPESPTVXXXXXXXXXX 139
            NE RFPY DLF     Q  +P           P C+T   LS  P  P+           
Sbjct: 641  NEHRFPYTDLFQPSLTQNVSPCQYFNLNPDLSPPCTTSTVLSQQPPLPSQIGDSSVSII- 699

Query: 140  XXXXXXXXXHINQTPHPTINSPEHTIPSTLPTVTLPTNQPNSATTTNTQPH--NTHAMQT 313
                            P+++S ++  PS+  + +   + P S+T   + P   N H MQT
Sbjct: 700  ----------------PSVSSSQNVSPSSPESSSQNVSSPTSSTAPASIPRTINNHPMQT 743

Query: 314  RSKSGITLPRLNPSVFLTTSEPTTTEQSLKDPNWLAVMQAEYTALQNNKTWTLVPLPPNR 493
            RSKSG   PR++PS+FL  SEP T +Q+L DPNW + MQ EY AL  N TW LV LP +R
Sbjct: 744  RSKSGFHNPRIHPSLFLAHSEPKTVKQALADPNWFSAMQQEYNALMLNHTWDLVSLPSDR 803

Query: 494  KAIGCKWVFRVKENADGTVSKYKARLVAK 580
            KA+GCKWVFRVKENADG++ K KARLVAK
Sbjct: 804  KAVGCKWVFRVKENADGSIDKLKARLVAK 832


>gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1358

 Score =  154 bits (390), Expect = 6e-40
 Identities = 90/209 (43%), Positives = 114/209 (54%), Gaps = 16/209 (7%)
 Frame = +2

Query: 2    NESRFPYNDLFP---*QGTAP-----------PKCSTPVNLSPLPESPTVXXXXXXXXXX 139
            NE RFPY DLF     Q  +P           P C+T   LS  P  P+           
Sbjct: 720  NEHRFPYTDLFQPSLTQNVSPCQYFNLNPDLSPPCTTSTVLSQQPPLPSQIGDSSVSII- 778

Query: 140  XXXXXXXXXHINQTPHPTINSPEHTIPSTLPTVTLPTNQPNSATTTNTQPH--NTHAMQT 313
                            P+++S ++  PS+  + +   + P S+T   + P   N H MQT
Sbjct: 779  ----------------PSVSSSQNVSPSSPESSSQNVSSPTSSTAPASIPRTINNHPMQT 822

Query: 314  RSKSGITLPRLNPSVFLTTSEPTTTEQSLKDPNWLAVMQAEYTALQNNKTWTLVPLPPNR 493
            RSKSG   PR++PS+FL  SEP T +Q+L DPNW + MQ EY AL  N TW LV LP +R
Sbjct: 823  RSKSGFHNPRIHPSLFLAHSEPKTVKQALADPNWFSAMQQEYNALMLNHTWDLVSLPSDR 882

Query: 494  KAIGCKWVFRVKENADGTVSKYKARLVAK 580
            KA+GCKWVFRVKENADG++ K KARLVAK
Sbjct: 883  KAVGCKWVFRVKENADGSIDKLKARLVAK 911


>gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1429

 Score =  153 bits (387), Expect = 1e-39
 Identities = 80/145 (55%), Positives = 97/145 (66%), Gaps = 11/145 (7%)
 Frame = +2

Query: 179  TPHPTINSPEHTIP-----STLPTVTLP-----TNQPNSATTTNTQPH-NTHAMQTRSKS 325
            TPH     P HT       S  PT TLP     T  PNS  T++  P  NTH M TRSK+
Sbjct: 839  TPHTPTTFPSHTSSPYISASASPTPTLPSTASSTIDPNSTPTSSPSPTTNTHHMLTRSKT 898

Query: 326  GITLPRLNPSVFLTTSEPTTTEQSLKDPNWLAVMQAEYTALQNNKTWTLVPLPPNRKAIG 505
            G   P L P++ LTT+EPTT +Q+L   +W   MQ EY ALQ NKTW+LVPLPP+++AIG
Sbjct: 899  GHLKPPLFPTINLTTTEPTTVQQALSSIHWTEAMQQEYQALQANKTWSLVPLPPHKRAIG 958

Query: 506  CKWVFRVKENADGTVSKYKARLVAK 580
            CKW+FR+KEN DGT++KYKARLVAK
Sbjct: 959  CKWIFRIKENPDGTINKYKARLVAK 983


>gb|PNX93462.1| histone deacetylase, partial [Trifolium pratense]
          Length = 1489

 Score =  153 bits (387), Expect = 1e-39
 Identities = 88/209 (42%), Positives = 111/209 (53%), Gaps = 16/209 (7%)
 Frame = +2

Query: 2    NESRFPYNDLFP*QGTAPPKCSTPVNLSPLPESPTVXXXXXXXXXXXXXXXXXXXHINQT 181
            NE RFPY  LFP    +P K    +  SP+P+ P                        ++
Sbjct: 852  NEYRFPYQFLFP----SPMK--NTILPSPVPDIPISTLPIGNHNHSQLATLNNTVQCQES 905

Query: 182  PHPTINSPEHTIPSTLPTVTLPTNQPNSATTTNTQ----------------PHNTHAMQT 313
                ++ P +         T+P N PNS  +  TQ                  NTH MQT
Sbjct: 906  SATALSQPPYVS-------TIPENSPNSNNSNTTQITTNASDIQKSTPPNKSTNTHTMQT 958

Query: 314  RSKSGITLPRLNPSVFLTTSEPTTTEQSLKDPNWLAVMQAEYTALQNNKTWTLVPLPPNR 493
            RSKSGI LP+ NP++ LT +EP T +Q+L  P W   M+ E+ ALQ N+TWTLV LPPNR
Sbjct: 959  RSKSGIVLPKQNPTLLLTHTEPKTVKQALSIPQWYNAMKDEFDALQRNQTWTLVSLPPNR 1018

Query: 494  KAIGCKWVFRVKENADGTVSKYKARLVAK 580
             AIGCKWVFR KEN DG+++KYKARLVAK
Sbjct: 1019 SAIGCKWVFRTKENPDGSINKYKARLVAK 1047


>dbj|GAU13081.1| hypothetical protein TSUD_173810 [Trifolium subterraneum]
          Length = 1295

 Score =  152 bits (385), Expect = 3e-39
 Identities = 85/199 (42%), Positives = 112/199 (56%), Gaps = 6/199 (3%)
 Frame = +2

Query: 2    NESRFPYNDLFP*QGTAPPKCSTPVNLSPLPESPTVXXXXXXXXXXXXXXXXXXXHINQT 181
            NE++FPY      Q TA    S P+   P+   P                       +Q 
Sbjct: 780  NENKFPYESSLSTQNTA---LSNPIQDVPISTLPIGDPNHTILTNIQNTTSTSSTTTDQN 836

Query: 182  PHPTINSPEHTIPSTLPTVTLPTNQPNSAT------TTNTQPHNTHAMQTRSKSGITLPR 343
              P       T+   + +  +  ++P SAT      +T+ +P N H MQTR+KSGIT+P+
Sbjct: 837  ASPV------TMHQIISSDVVAPSKPESATPSLTSHSTSYEPTNNHPMQTRAKSGITVPK 890

Query: 344  LNPSVFLTTSEPTTTEQSLKDPNWLAVMQAEYTALQNNKTWTLVPLPPNRKAIGCKWVFR 523
             +P + LT +EP TT+Q+LKD  W A M  E+ AL+ N+TWTLVPLP NR  IGCKWVFR
Sbjct: 891  KHPKLLLTHTEPKTTKQALKDHKWFAAMIEEFEALKRNQTWTLVPLPQNRDVIGCKWVFR 950

Query: 524  VKENADGTVSKYKARLVAK 580
             KENADGT++KYKARLVAK
Sbjct: 951  TKENADGTINKYKARLVAK 969