BLASTX nr result

ID: Astragalus23_contig00027664 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00027664
         (559 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU18667.1| hypothetical protein TSUD_125000 [Trifolium subt...    42   3e-06

>dbj|GAU18667.1| hypothetical protein TSUD_125000 [Trifolium subterraneum]
          Length = 229

 Score = 42.4 bits (98), Expect(2) = 3e-06
 Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
 Frame = -3

Query: 341 CGSSMESSRHLFCRIDFSPYVLYAVVS*LGFNFVLHLDLPSLFS---ILGVRQSSHLVVA 171
           CG+S+E+  HLF        V Y++   LGF+FV  + +  +F     LG+ + S L   
Sbjct: 108 CGASVEAIDHLFITCGSISLVWYSIFRWLGFHFVSPMSIRGVFQGFLALGLGRKSRLGWL 167

Query: 170 LI*HM----------DVYFHTVMPDLNHTVDRI*ALSWCWFFMQS 66
           LI H           DV F +    +   VD++   SW W+  ++
Sbjct: 168 LIWHATVWAIWNSQNDVIFASGTVSVESLVDKVNLSSWKWYLAKN 212



 Score = 36.2 bits (82), Expect(2) = 3e-06
 Identities = 19/36 (52%), Positives = 25/36 (69%)
 Frame = -1

Query: 445 YAPSRVIVFSLQLILDQIPIWINLFH*DIISDLSCA 338
           +APS+VIVFS QL+LD++P   NL    +I D S A
Sbjct: 68  WAPSKVIVFSWQLLLDRVPTRQNLLRRRVIRDPSGA 103


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