BLASTX nr result
ID: Astragalus23_contig00027223
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus23_contig00027223
(583 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PRQ54239.1| putative RNA-directed DNA polymerase [Rosa chinen... 235 2e-75
gb|PNX81877.1| hypothetical protein L195_g037902, partial [Trifo... 219 5e-65
gb|PNX85850.1| hypothetical protein L195_g041924 [Trifolium prat... 215 1e-64
gb|KYP58220.1| Retrovirus-related Pol polyprotein from transposo... 212 2e-64
gb|PRQ38020.1| putative RNA-directed DNA polymerase [Rosa chinen... 217 5e-64
emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera] 223 6e-64
gb|PRQ52345.1| putative RNA-directed DNA polymerase [Rosa chinen... 223 8e-64
gb|PRQ42077.1| putative RNA-directed DNA polymerase [Rosa chinen... 221 1e-63
gb|PNX66032.1| putative LRR receptor-like protein kinase, partia... 205 2e-63
gb|PRQ55184.1| putative RNA-directed DNA polymerase [Rosa chinen... 212 5e-63
gb|KYP32050.1| Retrovirus-related Pol polyprotein from transposo... 208 4e-62
gb|PNX85069.1| retrotransposon-related protein [Trifolium pratense] 209 8e-62
gb|PNX65508.1| putative LRR receptor-like protein kinase, partia... 200 1e-61
gb|PNX54819.1| putative LRR receptor-like protein kinase, partia... 202 1e-60
gb|KYP44456.1| Retrovirus-related Pol polyprotein from transposo... 202 5e-60
gb|PNX87200.1| copia-type polyprotein, partial [Trifolium pratense] 201 8e-60
dbj|GAU26746.1| hypothetical protein TSUD_317440 [Trifolium subt... 211 9e-60
gb|PRQ33949.1| putative RNA-directed DNA polymerase [Rosa chinen... 201 1e-59
gb|PNX95204.1| copia-type polyprotein [Trifolium pratense] 209 3e-59
gb|KYP56954.1| Retrovirus-related Pol polyprotein from transposo... 202 3e-59
>gb|PRQ54239.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 232
Score = 235 bits (599), Expect = 2e-75
Identities = 113/191 (59%), Positives = 138/191 (72%)
Frame = +3
Query: 3 TIRAIIALAAIHGWIVYQLDVKSAFLHVDITETVYIDQPQGFI*KGGENXXXXXXXXXXX 182
TIR I+ALA+ GW V+QLDVKSAFLH ++ ETVYIDQPQG++ +G E+
Sbjct: 41 TIRTILALASFKGWCVFQLDVKSAFLHGELNETVYIDQPQGYVKQGEEHKVYRLRKALYG 100
Query: 183 XXQAPRAWYSRVETYFNNEGFDKCHSEYTLFVKKDTAKGTLIVSLYVDDLLYTGNNSEMF 362
QAPRAWYSR+ETYF EGF+KCH E+TLFVK + LIVSLYV DL++T NN +MF
Sbjct: 101 LKQAPRAWYSRIETYFIKEGFEKCHCEHTLFVKTEDGGNILIVSLYVYDLIFTSNNEDMF 160
Query: 363 TDFKNSMKREFDMSDLGMMSYFLSIEVIQNKSGIFLGQSKYAKEVLSKFNMTDMISVKTP 542
FK SM +EF M+DLG M YFL +EVIQN+ GIF+ Q KYA EVL++F M D SVK P
Sbjct: 161 VKFKQSMMKEFAMTDLGKMKYFLGVEVIQNEQGIFINQKKYANEVLARFGMIDSNSVKNP 220
Query: 543 IAPGCSLTSTG 575
I PGC L+ +G
Sbjct: 221 IVPGCRLSRSG 231
>gb|PNX81877.1| hypothetical protein L195_g037902, partial [Trifolium pratense]
Length = 575
Score = 219 bits (557), Expect = 5e-65
Identities = 106/193 (54%), Positives = 133/193 (68%)
Frame = +3
Query: 3 TIRAIIALAAIHGWIVYQLDVKSAFLHVDITETVYIDQPQGFI*KGGENXXXXXXXXXXX 182
TIR +IALAA GW VYQLDVKSAFLH ++ E V++DQPQG++ KG E
Sbjct: 165 TIRMVIALAAQKGWNVYQLDVKSAFLHGELNEQVFVDQPQGYVKKGDELKVYKLKRALYG 224
Query: 183 XXQAPRAWYSRVETYFNNEGFDKCHSEYTLFVKKDTAKGTLIVSLYVDDLLYTGNNSEMF 362
QAPRAWYSR+E YF EGF++C E+TLFVK+ LIVSLYVDDL++TGN+ MF
Sbjct: 225 LKQAPRAWYSRIEAYFTKEGFERCPYEHTLFVKQSETGNILIVSLYVDDLIFTGNDENMF 284
Query: 363 TDFKNSMKREFDMSDLGMMSYFLSIEVIQNKSGIFLGQSKYAKEVLSKFNMTDMISVKTP 542
+FK SM++EF+MSDLG M YFL +EVIQN+ GI++ Q KY ++L +F M + P
Sbjct: 285 KEFKKSMEKEFNMSDLGKMHYFLGVEVIQNEEGIYICQRKYVTDLLERFGMEKSNLSRNP 344
Query: 543 IAPGCSLTSTGNG 581
IAPGC L NG
Sbjct: 345 IAPGCKLIKDENG 357
>gb|PNX85850.1| hypothetical protein L195_g041924 [Trifolium pratense]
Length = 477
Score = 215 bits (548), Expect = 1e-64
Identities = 105/193 (54%), Positives = 130/193 (67%)
Frame = +3
Query: 3 TIRAIIALAAIHGWIVYQLDVKSAFLHVDITETVYIDQPQGFI*KGGENXXXXXXXXXXX 182
TIR +IALAA GW VYQLDVKSAFLH ++ E V++DQPQG++ KG
Sbjct: 97 TIRMVIALAAQKGWSVYQLDVKSAFLHGELNEAVFVDQPQGYVKKGDTVKVYRLKKALYG 156
Query: 183 XXQAPRAWYSRVETYFNNEGFDKCHSEYTLFVKKDTAKGTLIVSLYVDDLLYTGNNSEMF 362
QAPRAWYSR+E YF EGF+KC E+TLFVK LI+SLYVDDL++TGN+ MF
Sbjct: 157 LKQAPRAWYSRIEAYFIKEGFEKCPYEHTLFVKLSEGGNILIISLYVDDLIFTGNDENMF 216
Query: 363 TDFKNSMKREFDMSDLGMMSYFLSIEVIQNKSGIFLGQSKYAKEVLSKFNMTDMISVKTP 542
+FK SM+ EF+MSDLG M YFL +EVIQN+ GI++ Q KY +E+L +F M + P
Sbjct: 217 EEFKKSMENEFNMSDLGKMHYFLGVEVIQNEKGIYICQRKYVRELLERFGMEKSNLSRNP 276
Query: 543 IAPGCSLTSTGNG 581
IAPGC L G
Sbjct: 277 IAPGCKLVKDEEG 289
>gb|KYP58220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 377
Score = 212 bits (539), Expect = 2e-64
Identities = 101/193 (52%), Positives = 132/193 (68%)
Frame = +3
Query: 3 TIRAIIALAAIHGWIVYQLDVKSAFLHVDITETVYIDQPQGFI*KGGENXXXXXXXXXXX 182
T+R +IA AA GW ++QLDVKSAFLH ++ E V+++QP+G++ KG E
Sbjct: 74 TVRLVIAYAAQKGWAIHQLDVKSAFLHGELAEDVFVEQPRGYVQKGKEEKVYKLKKALYG 133
Query: 183 XXQAPRAWYSRVETYFNNEGFDKCHSEYTLFVKKDTAKGTLIVSLYVDDLLYTGNNSEMF 362
QAPRAWY+R+E YF EGF KC E+TLFVK++ LIVSLYVDDLL+TGN+ MF
Sbjct: 134 LKQAPRAWYNRIEAYFIKEGFKKCEYEHTLFVKQNKRGSMLIVSLYVDDLLFTGNDELMF 193
Query: 363 TDFKNSMKREFDMSDLGMMSYFLSIEVIQNKSGIFLGQSKYAKEVLSKFNMTDMISVKTP 542
T+FKNSM EFDM+DLG M YFL +E++Q GIF+ Q KY +E+L +F + SV+TP
Sbjct: 194 TEFKNSMMLEFDMTDLGKMKYFLGLEILQTSGGIFICQKKYVEEMLQRFGLNQSNSVQTP 253
Query: 543 IAPGCSLTSTGNG 581
IAPG + G
Sbjct: 254 IAPGFKICKDEGG 266
>gb|PRQ38020.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 610
Score = 217 bits (552), Expect = 5e-64
Identities = 108/193 (55%), Positives = 130/193 (67%)
Frame = +3
Query: 3 TIRAIIALAAIHGWIVYQLDVKSAFLHVDITETVYIDQPQGFI*KGGENXXXXXXXXXXX 182
TIR IIALAA W +YQLDVKSAFLH ++TE V+++QPQGF KGGEN
Sbjct: 188 TIRMIIALAAQKNWSIYQLDVKSAFLHGELTEAVFVEQPQGFEVKGGENKVYKLKKALYG 247
Query: 183 XXQAPRAWYSRVETYFNNEGFDKCHSEYTLFVKKDTAKGTLIVSLYVDDLLYTGNNSEMF 362
QAPRAWYSR+E YF EGF+KC E+TLF+K LIVSLYVDDL++TGN +MF
Sbjct: 248 LKQAPRAWYSRIENYFVKEGFEKCDFEHTLFIKMGAGGKCLIVSLYVDDLIFTGNCEKMF 307
Query: 363 TDFKNSMKREFDMSDLGMMSYFLSIEVIQNKSGIFLGQSKYAKEVLSKFNMTDMISVKTP 542
FK SM +EFDMSDLG M YFL +EV+Q GI++ Q K+AKE+L +F M SV P
Sbjct: 308 VKFKESMMQEFDMSDLGKMRYFLGVEVLQCTEGIYISQKKFAKELLERFGMDGCNSVHNP 367
Query: 543 IAPGCSLTSTGNG 581
I PG + NG
Sbjct: 368 IVPGVKIGKDENG 380
>emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]
Length = 1084
Score = 223 bits (567), Expect = 6e-64
Identities = 110/193 (56%), Positives = 133/193 (68%)
Frame = +3
Query: 3 TIRAIIALAAIHGWIVYQLDVKSAFLHVDITETVYIDQPQGFI*KGGENXXXXXXXXXXX 182
TIR +IALAA +GW VYQLDVKSAFLH ++ E V+I+QPQG+ KG E+
Sbjct: 688 TIRMVIALAARNGWSVYQLDVKSAFLHGELNEAVFIEQPQGYEKKGEEHKVYKLKKALYG 747
Query: 183 XXQAPRAWYSRVETYFNNEGFDKCHSEYTLFVKKDTAKGTLIVSLYVDDLLYTGNNSEMF 362
QAPRAWYSR+E YF EGF++C ++TLF+K LIVSLYVDDL++TGN+ MF
Sbjct: 748 LKQAPRAWYSRIEAYFIKEGFERCSCDHTLFIKTGDGGKILIVSLYVDDLIFTGNDESMF 807
Query: 363 TDFKNSMKREFDMSDLGMMSYFLSIEVIQNKSGIFLGQSKYAKEVLSKFNMTDMISVKTP 542
FKNSMK EFDM+DLG M YFL +EV+QN GI++ Q KYAKEVL +F M SVK P
Sbjct: 808 VKFKNSMKLEFDMTDLGKMKYFLGVEVLQNSEGIYISQRKYAKEVLERFGMEKSNSVKNP 867
Query: 543 IAPGCSLTSTGNG 581
I PG LT G
Sbjct: 868 IVPGDRLTKNEGG 880
>gb|PRQ52345.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1316
Score = 223 bits (567), Expect = 8e-64
Identities = 110/193 (56%), Positives = 134/193 (69%)
Frame = +3
Query: 3 TIRAIIALAAIHGWIVYQLDVKSAFLHVDITETVYIDQPQGFI*KGGENXXXXXXXXXXX 182
TIR +IALAA GW VYQLDVKSAFLH ++TE V+IDQPQG++ +G E
Sbjct: 894 TIRMVIALAAQKGWKVYQLDVKSAFLHGELTEAVFIDQPQGYVKEGDELKVYKLNKALYG 953
Query: 183 XXQAPRAWYSRVETYFNNEGFDKCHSEYTLFVKKDTAKGTLIVSLYVDDLLYTGNNSEMF 362
QAPRAWYSR+E YF EGF++C E+TLFVK LIVSLYVDDL++TGN+ MF
Sbjct: 954 LKQAPRAWYSRIEAYFIKEGFERCPHEHTLFVKSSEGGKILIVSLYVDDLIFTGNDEYMF 1013
Query: 363 TDFKNSMKREFDMSDLGMMSYFLSIEVIQNKSGIFLGQSKYAKEVLSKFNMTDMISVKTP 542
+FK SMK EFDMSDLGMM YFL +EV+QN++GI++ Q KYA E+L +F M SV+ P
Sbjct: 1014 EEFKKSMKDEFDMSDLGMMRYFLGVEVVQNEAGIYICQKKYASEILERFGMEKANSVRNP 1073
Query: 543 IAPGCSLTSTGNG 581
I PG L G
Sbjct: 1074 IVPGIKLMKDEGG 1086
>gb|PRQ42077.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1044
Score = 221 bits (564), Expect = 1e-63
Identities = 110/193 (56%), Positives = 134/193 (69%)
Frame = +3
Query: 3 TIRAIIALAAIHGWIVYQLDVKSAFLHVDITETVYIDQPQGFI*KGGENXXXXXXXXXXX 182
TIR +IALAA GW VYQLDVKSAFLH ++TE V+IDQPQG++ +G E
Sbjct: 622 TIRMVIALAAKKGWKVYQLDVKSAFLHGELTEAVFIDQPQGYVKEGDELKVYKLNKALYG 681
Query: 183 XXQAPRAWYSRVETYFNNEGFDKCHSEYTLFVKKDTAKGTLIVSLYVDDLLYTGNNSEMF 362
QAPRAWYSR+E YF EGF++C E+TLFVK LIVSLYVDDL++TGN+ MF
Sbjct: 682 LKQAPRAWYSRIEAYFIKEGFERCPHEHTLFVKLSEGGKILIVSLYVDDLIFTGNDEYMF 741
Query: 363 TDFKNSMKREFDMSDLGMMSYFLSIEVIQNKSGIFLGQSKYAKEVLSKFNMTDMISVKTP 542
+FK SMK EFDMSDLGMM YFL +EV+QN++GI++ Q KYA E+L +F M SV+ P
Sbjct: 742 EEFKKSMKDEFDMSDLGMMRYFLGVEVVQNEAGIYICQKKYASEILERFGMEKANSVRNP 801
Query: 543 IAPGCSLTSTGNG 581
I PG L G
Sbjct: 802 IVPGFKLMKDEGG 814
>gb|PNX66032.1| putative LRR receptor-like protein kinase, partial [Trifolium
pratense]
Length = 234
Score = 205 bits (521), Expect = 2e-63
Identities = 98/193 (50%), Positives = 130/193 (67%)
Frame = +3
Query: 3 TIRAIIALAAIHGWIVYQLDVKSAFLHVDITETVYIDQPQGFI*KGGENXXXXXXXXXXX 182
TIR +I+LA+++ W +YQLDVKSAFLH ++ E VY++QP G++ KG ++
Sbjct: 25 TIRMVISLASLNKWTIYQLDVKSAFLHGELVEQVYVEQPPGYLKKGSKHMVYKLKRALYG 84
Query: 183 XXQAPRAWYSRVETYFNNEGFDKCHSEYTLFVKKDTAKGTLIVSLYVDDLLYTGNNSEMF 362
QAPRAWYSR++TYF GF KC E+TL++K LIV LYVDDL++TGN+ +F
Sbjct: 85 LKQAPRAWYSRIDTYFTQAGFHKCPYEHTLYIKTGEKGNILIVCLYVDDLIFTGNDERLF 144
Query: 363 TDFKNSMKREFDMSDLGMMSYFLSIEVIQNKSGIFLGQSKYAKEVLSKFNMTDMISVKTP 542
++FK SM EF+M+DLG M YFL IEV Q+ GIF+ Q KYA+EVL +F M D V+ P
Sbjct: 145 SEFKQSMMNEFEMTDLGEMKYFLGIEVTQSARGIFICQKKYAQEVLERFKMDDCNPVQIP 204
Query: 543 IAPGCSLTSTGNG 581
I PG LT G
Sbjct: 205 IVPGTKLTRDVEG 217
>gb|PRQ55184.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 516
Score = 212 bits (540), Expect = 5e-63
Identities = 104/193 (53%), Positives = 131/193 (67%)
Frame = +3
Query: 3 TIRAIIALAAIHGWIVYQLDVKSAFLHVDITETVYIDQPQGFI*KGGENXXXXXXXXXXX 182
TIR +I++AA H W +YQLDVKSAFLH ++ E VYIDQP G++ KG E
Sbjct: 74 TIRLVISMAAQHSWPIYQLDVKSAFLHGELQEQVYIDQPLGYVKKGSEEKVYRLKKALYG 133
Query: 183 XXQAPRAWYSRVETYFNNEGFDKCHSEYTLFVKKDTAKGTLIVSLYVDDLLYTGNNSEMF 362
QAPRAWYSR++TYF+N GF +C E+TL++K A L V LYVDDL+YTGN+ +MF
Sbjct: 134 LKQAPRAWYSRIDTYFSNAGFQRCPYEHTLYIKSGIAGKFLAVCLYVDDLIYTGNDDDMF 193
Query: 363 TDFKNSMKREFDMSDLGMMSYFLSIEVIQNKSGIFLGQSKYAKEVLSKFNMTDMISVKTP 542
T FKNSM EF+M+DL + YFL IEV+Q+ +GIF+ Q KYA EVL KF M D +V P
Sbjct: 194 TKFKNSMMAEFEMTDLERLHYFLGIEVLQSSAGIFITQRKYALEVLEKFEMKDCNAVAIP 253
Query: 543 IAPGCSLTSTGNG 581
PG LT +G
Sbjct: 254 AEPGLKLTMDPDG 266
>gb|KYP32050.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 444
Score = 208 bits (529), Expect = 4e-62
Identities = 103/193 (53%), Positives = 136/193 (70%)
Frame = +3
Query: 3 TIRAIIALAAIHGWIVYQLDVKSAFLHVDITETVYIDQPQGFI*KGGENXXXXXXXXXXX 182
T+R ++ALAA H W V+QLDVKSAFLH ++ E VY+ QP+GF+ KG E+
Sbjct: 74 TVRVLLALAAQHRWEVFQLDVKSAFLHGELKEEVYVQQPEGFVKKGKEDKVYRLKKALYG 133
Query: 183 XXQAPRAWYSRVETYFNNEGFDKCHSEYTLFVKKDTAKGTLIVSLYVDDLLYTGNNSEMF 362
QAP+AWY+++ETYF E F+KC SE+TLF KK+ LIVSLYVDDL+++ NN M
Sbjct: 134 LKQAPKAWYNKIETYFAKENFEKCPSEHTLFTKKNEG-NILIVSLYVDDLIFSRNNRRMC 192
Query: 363 TDFKNSMKREFDMSDLGMMSYFLSIEVIQNKSGIFLGQSKYAKEVLSKFNMTDMISVKTP 542
FK SM EFDMSDLG M +FL IEVIQ+ +GIF+ Q +YA+E+L++FNMTD V+ P
Sbjct: 193 EQFKCSMMLEFDMSDLGRMRHFLGIEVIQSDAGIFICQRRYAQEILARFNMTDCNPVRNP 252
Query: 543 IAPGCSLTSTGNG 581
I PG +L+ +G
Sbjct: 253 IVPGTNLSKEEDG 265
>gb|PNX85069.1| retrotransposon-related protein [Trifolium pratense]
Length = 538
Score = 209 bits (533), Expect = 8e-62
Identities = 104/193 (53%), Positives = 128/193 (66%)
Frame = +3
Query: 3 TIRAIIALAAIHGWIVYQLDVKSAFLHVDITETVYIDQPQGFI*KGGENXXXXXXXXXXX 182
T+R I+ALAA GWI+YQLDVKSAFLH ++ E V+++QP+G+ K N
Sbjct: 116 TVRMIVALAAQRGWIIYQLDVKSAFLHGELNEDVFVEQPRGYEKKDSPNKVYKLKKALYG 175
Query: 183 XXQAPRAWYSRVETYFNNEGFDKCHSEYTLFVKKDTAKGTLIVSLYVDDLLYTGNNSEMF 362
QAPR+W+SR+E YF EGF KCHSE+TLFVK LIVS+YVDDL++TG++ MF
Sbjct: 176 LKQAPRSWFSRIEAYFVKEGFLKCHSEHTLFVKISKEGKILIVSIYVDDLIFTGDDESMF 235
Query: 363 TDFKNSMKREFDMSDLGMMSYFLSIEVIQNKSGIFLGQSKYAKEVLSKFNMTDMISVKTP 542
DFKNSM EFDMSDLG M YFL IEV+Q GI++ Q KYA EVL +F M SV P
Sbjct: 236 EDFKNSMMHEFDMSDLGKMRYFLGIEVLQRNDGIYICQKKYALEVLRRFGMEGSNSVHNP 295
Query: 543 IAPGCSLTSTGNG 581
I PG + G
Sbjct: 296 IVPGFKICKDKEG 308
>gb|PNX65508.1| putative LRR receptor-like protein kinase, partial [Trifolium
pratense]
Length = 223
Score = 200 bits (508), Expect = 1e-61
Identities = 95/189 (50%), Positives = 127/189 (67%)
Frame = +3
Query: 15 IIALAAIHGWIVYQLDVKSAFLHVDITETVYIDQPQGFI*KGGENXXXXXXXXXXXXXQA 194
+I+LA+++ W +YQLDVKSAFLH ++ E VY++QP G++ KG ++ QA
Sbjct: 2 VISLASLNKWTIYQLDVKSAFLHGELVEQVYVEQPPGYLKKGSKHMVYKLKRALYGLKQA 61
Query: 195 PRAWYSRVETYFNNEGFDKCHSEYTLFVKKDTAKGTLIVSLYVDDLLYTGNNSEMFTDFK 374
PRAWYSR++TYF GF KC E+TL++K LIV LYVDDL++TGN+ +F++FK
Sbjct: 62 PRAWYSRIDTYFTQAGFHKCPYEHTLYIKTGEKGNILIVCLYVDDLIFTGNDERLFSEFK 121
Query: 375 NSMKREFDMSDLGMMSYFLSIEVIQNKSGIFLGQSKYAKEVLSKFNMTDMISVKTPIAPG 554
SM EF+M+DLG M YFL IEV Q+ GIF+ Q KYA+EVL +F M D V+ PI PG
Sbjct: 122 QSMMNEFEMTDLGEMKYFLGIEVTQSARGIFICQKKYAQEVLERFKMDDCNPVQIPIVPG 181
Query: 555 CSLTSTGNG 581
LT G
Sbjct: 182 TKLTRDVEG 190
>gb|PNX54819.1| putative LRR receptor-like protein kinase, partial [Trifolium
pratense]
Length = 364
Score = 202 bits (513), Expect = 1e-60
Identities = 96/193 (49%), Positives = 127/193 (65%)
Frame = +3
Query: 3 TIRAIIALAAIHGWIVYQLDVKSAFLHVDITETVYIDQPQGFI*KGGENXXXXXXXXXXX 182
T+R I+ALAA GW ++QLDVKSAFLH ++ E VY+ P+G++ KG EN
Sbjct: 114 TVRMIVALAACRGWDIFQLDVKSAFLHGELREDVYVHLPKGYVKKGKENKVYKLHKALYG 173
Query: 183 XXQAPRAWYSRVETYFNNEGFDKCHSEYTLFVKKDTAKGTLIVSLYVDDLLYTGNNSEMF 362
QAPRAW+SR+E+ F EGF KC +E TLF+K+ T LIVS+YVDDL+YTG++ M
Sbjct: 174 LKQAPRAWFSRIESQFVKEGFQKCPNEQTLFIKRSTGGSILIVSIYVDDLIYTGDDKGMM 233
Query: 363 TDFKNSMKREFDMSDLGMMSYFLSIEVIQNKSGIFLGQSKYAKEVLSKFNMTDMISVKTP 542
+FK SM FDM+DLG M +FL IE++Q GIF+ Q KYA ++L KF M++ V P
Sbjct: 234 VEFKKSMMEAFDMTDLGKMRFFLGIEILQKSEGIFICQRKYATDILKKFTMSESKPVNCP 293
Query: 543 IAPGCSLTSTGNG 581
I PG + NG
Sbjct: 294 IVPGSKINRDVNG 306
>gb|KYP44456.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 416
Score = 202 bits (513), Expect = 5e-60
Identities = 99/192 (51%), Positives = 130/192 (67%)
Frame = +3
Query: 6 IRAIIALAAIHGWIVYQLDVKSAFLHVDITETVYIDQPQGFI*KGGENXXXXXXXXXXXX 185
+R IIA+AA GW +YQLDVKSAFL+ + E VY++QP+G++ KG EN
Sbjct: 117 VRMIIAIAASRGWKLYQLDVKSAFLYGTLNEDVYVEQPKGYVQKGCENKVYKLYKALYGL 176
Query: 186 XQAPRAWYSRVETYFNNEGFDKCHSEYTLFVKKDTAKGTLIVSLYVDDLLYTGNNSEMFT 365
QAPRAW++R+E+YF + GF K + E TLF+K + LIVSLYVDDL+YT N+ + +
Sbjct: 177 KQAPRAWFNRIESYFMSAGFRKSNHEQTLFLKHTLDERVLIVSLYVDDLIYTSNDESLMS 236
Query: 366 DFKNSMKREFDMSDLGMMSYFLSIEVIQNKSGIFLGQSKYAKEVLSKFNMTDMISVKTPI 545
FKNSMK+EFDM+DLG M +FL IEV+Q GI++ Q KYA EVL +F M+D K PI
Sbjct: 237 AFKNSMKKEFDMTDLGRMRFFLGIEVLQEDDGIYIYQRKYALEVLRRFGMSDSNFFKVPI 296
Query: 546 APGCSLTSTGNG 581
PGC L+ G
Sbjct: 297 VPGCKLSKDETG 308
>gb|PNX87200.1| copia-type polyprotein, partial [Trifolium pratense]
Length = 396
Score = 201 bits (510), Expect = 8e-60
Identities = 99/180 (55%), Positives = 126/180 (70%)
Frame = +3
Query: 42 WIVYQLDVKSAFLHVDITETVYIDQPQGFI*KGGENXXXXXXXXXXXXXQAPRAWYSRVE 221
W ++QLDV+SAFLH ++TE VY++QP+G+ KG + QAPRAWY+++E
Sbjct: 4 WTIHQLDVESAFLHGELTENVYVEQPKGYKKKGDK--VYKLKKALYGLKQAPRAWYNKIE 61
Query: 222 TYFNNEGFDKCHSEYTLFVKKDTAKGTLIVSLYVDDLLYTGNNSEMFTDFKNSMKREFDM 401
YF E F+KC E+TLFVK+D + LIVSL VDDL+YTGNN+EMF DFK SMKR F M
Sbjct: 62 AYFGQENFEKCPHEHTLFVKQDEGR-ILIVSLCVDDLIYTGNNTEMFEDFKYSMKRRFAM 120
Query: 402 SDLGMMSYFLSIEVIQNKSGIFLGQSKYAKEVLSKFNMTDMISVKTPIAPGCSLTSTGNG 581
+DLG M YFL +EV Q K GIF+ Q KYAKE+LS+F M +V +PI PGC L+ NG
Sbjct: 121 TDLGQMRYFLGVEVTQEKYGIFINQQKYAKEILSRFGMEMCNAVSSPIVPGCKLSKDENG 180
>dbj|GAU26746.1| hypothetical protein TSUD_317440 [Trifolium subterraneum]
Length = 1608
Score = 211 bits (537), Expect = 9e-60
Identities = 103/193 (53%), Positives = 137/193 (70%)
Frame = +3
Query: 3 TIRAIIALAAIHGWIVYQLDVKSAFLHVDITETVYIDQPQGFI*KGGENXXXXXXXXXXX 182
T+R ++ALAA GW V+QLDVKSAFLH ++ E V++ QP+GF+ KG EN
Sbjct: 919 TVRVLLALAAQRGWEVFQLDVKSAFLHGELKEEVFVQQPEGFVKKGEENKVYKLKKALYG 978
Query: 183 XXQAPRAWYSRVETYFNNEGFDKCHSEYTLFVKKDTAKGTLIVSLYVDDLLYTGNNSEMF 362
QAPRAWY+++E YF E F++C SE+TLF KK+ LIVSLYVDDL++TGNN M
Sbjct: 979 LKQAPRAWYNKIEAYFAKENFERCSSEHTLFTKKNEGN-ILIVSLYVDDLIFTGNNKRMC 1037
Query: 363 TDFKNSMKREFDMSDLGMMSYFLSIEVIQNKSGIFLGQSKYAKEVLSKFNMTDMISVKTP 542
+FK+SMK +FDM+DLG M YFL IEVIQ ++GIF+ Q +YA+EVL++FNM V+ P
Sbjct: 1038 DEFKSSMKLDFDMTDLGRMRYFLGIEVIQCEAGIFICQRRYAREVLARFNMGSSNPVRNP 1097
Query: 543 IAPGCSLTSTGNG 581
I PG +L+ +G
Sbjct: 1098 IVPGTNLSKDEDG 1110
>gb|PRQ33949.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 425
Score = 201 bits (511), Expect = 1e-59
Identities = 103/193 (53%), Positives = 128/193 (66%)
Frame = +3
Query: 3 TIRAIIALAAIHGWIVYQLDVKSAFLHVDITETVYIDQPQGFI*KGGENXXXXXXXXXXX 182
T+R I+ALAA W VYQLDVKSAFLH ++ E VY++QP+GF K N
Sbjct: 3 TVRIILALAAHKSWKVYQLDVKSAFLHGELMEDVYVEQPKGFEKKEELNKVYKLRKALYG 62
Query: 183 XXQAPRAWYSRVETYFNNEGFDKCHSEYTLFVKKDTAKGTLIVSLYVDDLLYTGNNSEMF 362
QAPRAW+SR+E YF EGF+KC SE TLFVK + LIVSLYVDDL+YTGN+ M
Sbjct: 63 LKQAPRAWFSRIEAYFLREGFEKCPSEQTLFVKTNNRGKLLIVSLYVDDLIYTGNDDAMM 122
Query: 363 TDFKNSMKREFDMSDLGMMSYFLSIEVIQNKSGIFLGQSKYAKEVLSKFNMTDMISVKTP 542
+FK+SM +EFDMSDLG M YFL +EV Q + GIF+ Q KYA +VL +F M +V P
Sbjct: 123 REFKDSMMKEFDMSDLGKMRYFLGLEVQQLQDGIFISQKKYAMDVLRRFGMEKSNAVLNP 182
Query: 543 IAPGCSLTSTGNG 581
I PG ++ +G
Sbjct: 183 IVPGFKISKDESG 195
>gb|PNX95204.1| copia-type polyprotein [Trifolium pratense]
Length = 1328
Score = 209 bits (533), Expect = 3e-59
Identities = 106/193 (54%), Positives = 134/193 (69%)
Frame = +3
Query: 3 TIRAIIALAAIHGWIVYQLDVKSAFLHVDITETVYIDQPQGFI*KGGENXXXXXXXXXXX 182
TIR ++++AA W VYQLDVKSAFLH +++E VY+DQP G+ KG ++
Sbjct: 906 TIRTVLSIAASESWTVYQLDVKSAFLHGELSEDVYVDQPLGYQ-KGKKSQVYKLKKALYG 964
Query: 183 XXQAPRAWYSRVETYFNNEGFDKCHSEYTLFVKKDTAKGTLIVSLYVDDLLYTGNNSEMF 362
QAPRAWYS++E YF+NE F+KC E+TLFVK+ K LIVSLYVDDL+YTGN+ E+
Sbjct: 965 LRQAPRAWYSKIEAYFSNEKFEKCSHEHTLFVKQVEEK-ILIVSLYVDDLIYTGNDDELI 1023
Query: 363 TDFKNSMKREFDMSDLGMMSYFLSIEVIQNKSGIFLGQSKYAKEVLSKFNMTDMISVKTP 542
DFK+SMKR F M+DLG MSYFL +EV QN GIF+ Q KYA E+L++FNM V +P
Sbjct: 1024 RDFKSSMKRNFAMTDLGKMSYFLGVEVTQNDRGIFINQQKYAAEILNRFNMDSCNFVCSP 1083
Query: 543 IAPGCSLTSTGNG 581
I PG L NG
Sbjct: 1084 IVPGTKLFKDENG 1096
>gb|KYP56954.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 515
Score = 202 bits (514), Expect = 3e-59
Identities = 102/193 (52%), Positives = 134/193 (69%)
Frame = +3
Query: 3 TIRAIIALAAIHGWIVYQLDVKSAFLHVDITETVYIDQPQGFI*KGGENXXXXXXXXXXX 182
T+R I+AL A + W V QLDVKSAFLH ++ E VY+ QP+GFI KG E+
Sbjct: 96 TVRLILALVAQNAWKVMQLDVKSAFLHGELQEEVYVQQPKGFIKKGKEDHIYRLKKALYG 155
Query: 183 XXQAPRAWYSRVETYFNNEGFDKCHSEYTLFVKKDTAKGTLIVSLYVDDLLYTGNNSEMF 362
QAPRAWYS++E YF E F++C +E+TLF K+ LIV LYVDDL++TGN+ +M
Sbjct: 156 LKQAPRAWYSKIEAYFAKERFERCSNEHTLFTKR-IHDNILIVRLYVDDLIFTGNSKDMC 214
Query: 363 TDFKNSMKREFDMSDLGMMSYFLSIEVIQNKSGIFLGQSKYAKEVLSKFNMTDMISVKTP 542
+FKNSMK EFDM+DLG M +FL IEVIQ+ +GIF+ Q +YA +VL++FNMT+ SV+ P
Sbjct: 215 DEFKNSMKAEFDMTDLGHMRHFLGIEVIQSNTGIFICQRQYAHDVLARFNMTESNSVRNP 274
Query: 543 IAPGCSLTSTGNG 581
I PG L+ G
Sbjct: 275 IVPGTILSKDIEG 287