BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00027013
         (581 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX81608.1| ribonuclease H [Trifolium pratense]                     88   2e-27
dbj|GAU43502.1| hypothetical protein TSUD_398950 [Trifolium subt...    83   1e-26
dbj|GAU13938.1| hypothetical protein TSUD_262650 [Trifolium subt...    76   1e-25
dbj|GAU47307.1| hypothetical protein TSUD_283760 [Trifolium subt...    73   8e-25
gb|PNY00696.1| ribonuclease H [Trifolium pratense]                     84   8e-25
dbj|GAU30604.1| hypothetical protein TSUD_392950 [Trifolium subt...    90   2e-24
dbj|GAU46467.1| hypothetical protein TSUD_402340 [Trifolium subt...    70   3e-24
dbj|BAE71259.1| hypothetical protein [Trifolium pratense]              74   5e-24
dbj|GAU19541.1| hypothetical protein TSUD_303540 [Trifolium subt...    84   8e-24
dbj|GAU32702.1| hypothetical protein TSUD_145760 [Trifolium subt...    72   1e-23
gb|PNY15498.1| ribonuclease H [Trifolium pratense]                     75   1e-23
dbj|GAU25543.1| hypothetical protein TSUD_259770 [Trifolium subt...    72   3e-23
gb|PNX66369.1| ribonuclease H, partial [Trifolium pratense]            78   3e-23
dbj|GAU34270.1| hypothetical protein TSUD_321160 [Trifolium subt...    67   7e-22
gb|PNY06182.1| ribonuclease H [Trifolium pratense]                     76   9e-22
gb|PNY17666.1| ribonuclease H [Trifolium pratense]                     72   1e-21
dbj|GAU10071.1| hypothetical protein TSUD_422240 [Trifolium subt...    72   1e-21
dbj|GAU12910.1| hypothetical protein TSUD_73970 [Trifolium subte...    71   2e-21
gb|PNY12420.1| ribonuclease H [Trifolium pratense]                     65   4e-21
dbj|GAU31911.1| hypothetical protein TSUD_270960 [Trifolium subt...    70   4e-21

>gb|PNX81608.1| ribonuclease H [Trifolium pratense]
          Length = 630

 Score = 88.2 bits (217), Expect(2) = 2e-27
 Identities = 45/100 (45%), Positives = 62/100 (62%)
 Frame = -1

Query: 308 DAGFAELWGVLDGLLLARDYVFLKIDVQVHSMIVMSQLSKSGSVSIADASIVNRIRSLLC 129
           +A  AELWGV DGL LARD    K+ V V S +V+  L+ +   S+    ++  IR LL 
Sbjct: 510 NAYIAELWGVHDGLCLARDKGAKKLKVYVDSSVVVHTLNSTTGGSVVGWRLIQEIRRLLA 569

Query: 128 LDWEVRFSHCYREANCCADVMASIGYDHEVILCLYEIPPA 9
           LDWE++  H YREAN CAD +A++G DH   + +YE  P+
Sbjct: 570 LDWEIKVCHSYREANACADALANMGCDHGPGIRVYEQCPS 609



 Score = 62.0 bits (149), Expect(2) = 2e-27
 Identities = 31/85 (36%), Positives = 44/85 (51%)
 Frame = -2

Query: 580 TCHFWWTWRNKECFDPSFSPPHAPWRTVIRACSDYKEASQSKSILNTRSFST*HVKWSPL 401
           +CHF W WRN+E    S   P  PW+ +++    Y EA  S  ++  R      V W   
Sbjct: 407 SCHFLWLWRNRETHGDSRLRPLQPWKLILKWVMQYFEADVSGIVIANRQKVEITVTWQCP 466

Query: 400 ENDWIRLNSDGAVKGVDKIAGSGGV 326
           E+ W+ LN+DGA +G    AG GG+
Sbjct: 467 EDGWLSLNTDGASRG-HTSAGCGGL 490


>dbj|GAU43502.1| hypothetical protein TSUD_398950 [Trifolium subterraneum]
          Length = 1962

 Score = 83.2 bits (204), Expect(2) = 1e-26
 Identities = 44/104 (42%), Positives = 64/104 (61%)
 Frame = -1

Query: 320  VMK*DAGFAELWGVLDGLLLARDYVFLKIDVQVHSMIVMSQLSKSGSVSIADASIVNRIR 141
            V K  A  AELWGVL+GLLL +   F  +++ + S IV+  L+   + S+   +IV ++R
Sbjct: 1838 VGKCSAFVAELWGVLEGLLLVQRMGFANVELSIDSKIVVHALTSGTATSVDGYAIVRKVR 1897

Query: 140  SLLCLDWEVRFSHCYREANCCADVMASIGYDHEVILCLYEIPPA 9
             LL LDW VR +H YREAN CAD +A+IG   ++    ++  PA
Sbjct: 1898 RLLLLDWNVRVTHEYREANKCADALANIGCTLDMECTYFQECPA 1941



 Score = 64.7 bits (156), Expect(2) = 1e-26
 Identities = 30/84 (35%), Positives = 47/84 (55%)
 Frame = -2

Query: 577  CHFWWTWRNKECFDPSFSPPHAPWRTVIRACSDYKEASQSKSILNTRSFST*HVKWSPLE 398
            C  +WTWRNKE  + +F  P      + +   +YK A+++  ++  +     H++W P E
Sbjct: 1740 CSCFWTWRNKELHEDNFMRPSNIILHIRKLGENYKNATRAMEVMGQKEKIIAHIRWKPPE 1799

Query: 397  NDWIRLNSDGAVKGVDKIAGSGGV 326
              W++LN+DGA K  D  AG GGV
Sbjct: 1800 GVWVKLNTDGACK-EDNRAGCGGV 1822


>dbj|GAU13938.1| hypothetical protein TSUD_262650 [Trifolium subterraneum]
          Length = 875

 Score = 75.9 bits (185), Expect(2) = 1e-25
 Identities = 39/84 (46%), Positives = 52/84 (61%)
 Frame = -1

Query: 305  AGFAELWGVLDGLLLARDYVFLKIDVQVHSMIVMSQLSKSGSVSIADASIVNRIRSLLCL 126
            A  AELWGV +GL LA+   F K+++ + S+ V+  +S     S    S+V  IR LL L
Sbjct: 756  AFIAELWGVFEGLSLAKRMCFRKVELHIDSVAVVQVISTGKLKSKLGWSLVLNIRKLLDL 815

Query: 125  DWEVRFSHCYREANCCADVMASIG 54
            DWEV  +H YRE N CAD +A+IG
Sbjct: 816  DWEVTITHAYRETNKCADALANIG 839



 Score = 68.6 bits (166), Expect(2) = 1e-25
 Identities = 32/85 (37%), Positives = 47/85 (55%)
 Frame = -2

Query: 580 TCHFWWTWRNKECFDPSFSPPHAPWRTVIRACSDYKEASQSKSILNTRSFST*HVKWSPL 401
           TCH  W WRNKE  D  F  P  P   V +   +Y+ A Q+  +L+ R ++   + W P 
Sbjct: 652 TCHSLWMWRNKEAHDEEFVRPMQPVNYVQKRVEEYQHAKQASDLLDGREYTLVDIGWKPP 711

Query: 400 ENDWIRLNSDGAVKGVDKIAGSGGV 326
              +++LN+DGA K  +K AG GG+
Sbjct: 712 SGSFVKLNTDGARKDNNK-AGCGGI 735


>dbj|GAU47307.1| hypothetical protein TSUD_283760 [Trifolium subterraneum]
          Length = 369

 Score = 72.8 bits (177), Expect(2) = 8e-25
 Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
 Frame = -1

Query: 305 AGFAELWGVLDGLLLARDYVFLKIDVQVHSMIVMSQLSKSGSVSIADASIVNRIRSLLCL 126
           A  AELWGV +GL  A+   F  +++ V S++V   +    S S     +V  IR +L  
Sbjct: 124 AVIAELWGVAEGLSYAKRLGFTAVELNVDSIVVAQAVKSGNSNSPVGLPLVKHIRRVLNS 183

Query: 125 DWEVRFSHCYREANCCADVMASIG--YDHEVI 36
           DWE++  H YRE+N CAD MA++G   D E+I
Sbjct: 184 DWEIKVEHAYRESNKCADAMANVGCQLDREII 215



 Score = 68.9 bits (167), Expect(2) = 8e-25
 Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
 Frame = -2

Query: 577 CHFWWTWRNKECFDPSFSPPHAPWRTVIRACSDYKEASQSKSIL-NTRSFST*HVKWSPL 401
           CH  WTWRNKE  D  FS P  P + V R   DY +A  +  I+ NT S  T ++ W P 
Sbjct: 21  CHCLWTWRNKETHDADFSRPTHPVQQVYRRVDDYYQAIITNRIMRNTTSMLT-YISWKPP 79

Query: 400 ENDWIRLNSDGAVKGVDKIAGSGGV 326
             ++++LN+DGA K + + AG GG+
Sbjct: 80  SGNFVKLNTDGASKDLSR-AGCGGI 103


>gb|PNY00696.1| ribonuclease H [Trifolium pratense]
          Length = 276

 Score = 84.0 bits (206), Expect(2) = 8e-25
 Identities = 42/90 (46%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
 Frame = -1

Query: 296 AELWGVLDGLLLARDYVFLKIDVQVHSMIVMSQLSKSGSVSIADASIVNRIRSLLCLDWE 117
           AELWGV +GL  AR   F+K+++ + S+ V++ L+K    S+A A +V  IRSL+ LDWE
Sbjct: 160 AELWGVYEGLSYARRLGFMKVELNIDSVTVVNVLTKGTLQSLARAMLVRNIRSLIALDWE 219

Query: 116 VRFSHCYREANCCADVMASIG--YDHEVIL 33
           V   H YRE+N CAD + +IG   D E+I+
Sbjct: 220 VSIVHAYRESNQCADALVNIGCTLDKEIIV 249



 Score = 57.8 bits (138), Expect(2) = 8e-25
 Identities = 30/84 (35%), Positives = 42/84 (50%)
 Frame = -2

Query: 577 CHFWWTWRNKECFDPSFSPPHAPWRTVIRACSDYKEASQSKSILNTRSFST*HVKWSPLE 398
           CH  W WRNKE  D  F  P    + V     DY +A ++  +L  R   +  + W P  
Sbjct: 54  CHNLWIWRNKELHDDDFVRPMYAVQYVSNKVEDYMQAKKATEVLRCREVVSIQIGWIPPT 113

Query: 397 NDWIRLNSDGAVKGVDKIAGSGGV 326
            D ++LN+DGA K  + IA  GG+
Sbjct: 114 RDRVKLNTDGARKH-NNIAWCGGI 136


>dbj|GAU30604.1| hypothetical protein TSUD_392950 [Trifolium subterraneum]
          Length = 233

 Score = 90.1 bits (222), Expect(3) = 2e-24
 Identities = 43/94 (45%), Positives = 65/94 (69%)
 Frame = -1

Query: 296 AELWGVLDGLLLARDYVFLKIDVQVHSMIVMSQLSKSGSVSIADASIVNRIRSLLCLDWE 117
           AELWG+L+G+ +AR   F K++VQ+ S I++S ++K G  +++  SI+ +IRSLL LDW 
Sbjct: 117 AELWGLLEGISIARSMGFNKLEVQMDSEIIVSIINKHGHGNVSGWSIIKKIRSLLSLDWS 176

Query: 116 VRFSHCYREANCCADVMASIGYDHEVILCLYEIP 15
           V+  H YREAN CAD++A++G  H     +Y  P
Sbjct: 177 VKICHFYREANRCADMLANMGCVHNHGTLIYNQP 210



 Score = 49.7 bits (117), Expect(3) = 2e-24
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
 Frame = -2

Query: 538 DPSFSPPHAPWRTVIRACSDYKEASQS-KSILNTRSFST*HVKWSPLENDWIRLNSDGAV 362
           + SF  P+ PW  ++ + + Y  +  S +S+ N  S     V+W P E+ WI LN+D A 
Sbjct: 22  EASFQDPYKPWEIIMNSLTYYMRSMDSHRSLQNNTSRVNKDVRWYPSEHGWICLNTDDAF 81

Query: 361 KGVDKIAGSGGVF 323
           K  +   G GG+F
Sbjct: 82  KSHNTKDGCGGLF 94



 Score = 20.4 bits (41), Expect(3) = 2e-24
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -3

Query: 321 RDEVGRWICGALGSFG 274
           RDE G WI G   S G
Sbjct: 95  RDEDGHWIRGFSKSLG 110


>dbj|GAU46467.1| hypothetical protein TSUD_402340 [Trifolium subterraneum]
          Length = 299

 Score = 70.5 bits (171), Expect(2) = 3e-24
 Identities = 29/84 (34%), Positives = 51/84 (60%)
 Frame = -2

Query: 577 CHFWWTWRNKECFDPSFSPPHAPWRTVIRACSDYKEASQSKSILNTRSFST*HVKWSPLE 398
           C+F W WRN+E  D SF+ P  P + +++ C +YK A+++  ++ +       + W P  
Sbjct: 77  CYFLWNWRNREYHDNSFTRPVQPVQVIMQRCREYKLAARASRVVTSVPRINVMIGWEPPS 136

Query: 397 NDWIRLNSDGAVKGVDKIAGSGGV 326
             W++LN+DGA K  +++AG GG+
Sbjct: 137 QGWVKLNTDGARKN-ERVAGCGGI 159



 Score = 69.3 bits (168), Expect(2) = 3e-24
 Identities = 31/81 (38%), Positives = 51/81 (62%)
 Frame = -1

Query: 296 AELWGVLDGLLLARDYVFLKIDVQVHSMIVMSQLSKSGSVSIADASIVNRIRSLLCLDWE 117
           AELWGVL+GL  A    F K+++++ S IV+  ++   + S    +++  IR ++ L+W 
Sbjct: 183 AELWGVLEGLNYAWKLGFKKVELEIDSAIVVDAVNSGETNSAMGIALIRSIRRIIALNWN 242

Query: 116 VRFSHCYREANCCADVMASIG 54
           V+  H YRE+N CAD  A++G
Sbjct: 243 VKVYHSYRESNLCADAFANLG 263


>dbj|BAE71259.1| hypothetical protein [Trifolium pratense]
          Length = 553

 Score = 74.3 bits (181), Expect(2) = 5e-24
 Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
 Frame = -1

Query: 296 AELWGVLDGLLLARDYVFLKIDVQVHSMIVMSQLSKSGSVSIADASIVNRIRSLLCLDWE 117
           AELWGV +GL  AR   F  +++ V S++V+  +      S     +V  IR +L LDWE
Sbjct: 437 AELWGVAEGLSYARRLGFTAVELNVDSVVVVQAIKTGRFSSSVGLPLVKHIRRMLDLDWE 496

Query: 116 VRFSHCYREANCCADVMASIG--YDHEVI 36
           ++  H YRE+N CAD MA+IG   D E I
Sbjct: 497 IKIEHAYRESNKCADAMANIGCHLDRETI 525



 Score = 64.7 bits (156), Expect(2) = 5e-24
 Identities = 28/84 (33%), Positives = 49/84 (58%)
 Frame = -2

Query: 577 CHFWWTWRNKECFDPSFSPPHAPWRTVIRACSDYKEASQSKSILNTRSFST*HVKWSPLE 398
           CH +WTWRNKE  D  F+ P    + V R  +DY +A+++  ++  ++    ++ W P  
Sbjct: 331 CHCFWTWRNKEIHDAEFTRPIYAMQHVYRRVNDYYQANKTNRLMRIKNDMLVYISWKPPC 390

Query: 397 NDWIRLNSDGAVKGVDKIAGSGGV 326
             +++LN+DGA K  ++  G GG+
Sbjct: 391 GSYVKLNTDGACKDQNR-GGCGGI 413


>dbj|GAU19541.1| hypothetical protein TSUD_303540 [Trifolium subterraneum]
          Length = 642

 Score = 83.6 bits (205), Expect(2) = 8e-24
 Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
 Frame = -1

Query: 308 DAGFAELWGVLDGLLLARDYVFLKIDVQVHSMIVMSQLSKSGSVSIADASIVNRIRSLLC 129
           +A  AELWGVLDGL    +    KI++ + S +V+  L  +    +    I+  IR LL 
Sbjct: 522 NAYLAELWGVLDGLNFTYERGHKKIELHIDSNVVVQTLHSARDGGVVGWRIIQEIRRLLA 581

Query: 128 LDWEVRFSHCYREANCCADVMASIGYDHEVILCLYE-IPPAI 6
           LDW+V+  H YREAN CAD +A++G DH   L +YE  PP +
Sbjct: 582 LDWDVKICHSYREANACADALANLGCDHGPGLRVYEQCPPKV 623



 Score = 54.7 bits (130), Expect(2) = 8e-24
 Identities = 24/71 (33%), Positives = 33/71 (46%)
 Frame = -2

Query: 577 CHFWWTWRNKECFDPSFSPPHAPWRTVIRACSDYKEASQSKSILNTRSFST*HVKWSPLE 398
           CH  W WRN+EC       P   W+T++     YK+A      L         + W+   
Sbjct: 424 CHVLWLWRNRECHGDMRVRPTQLWQTILYMVQQYKQADIKSIALPVHQKVEVPIGWNKPA 483

Query: 397 NDWIRLNSDGA 365
            DWI+LN+DGA
Sbjct: 484 GDWIKLNTDGA 494


>dbj|GAU32702.1| hypothetical protein TSUD_145760 [Trifolium subterraneum]
          Length = 739

 Score = 72.0 bits (175), Expect(2) = 1e-23
 Identities = 38/102 (37%), Positives = 55/102 (53%)
 Frame = -2

Query: 577 CHFWWTWRNKECFDPSFSPPHAPWRTVIRACSDYKEASQSKSILNTRSFST*HVKWSPLE 398
           C++ W WRNKE  D +F  P    + V++ C +YK A++SK I+  +  ST  + W P  
Sbjct: 517 CYYLWIWRNKELHDENFIRPGHAVQFVLQRCREYKNANKSKRIVTDKPHSTVWIGWKPPV 576

Query: 397 NDWIRLNSDGAVKGVDKIAGSGGVFT**SRTLDLRSSGEFWM 272
             WI+LN+DGA KG     G GGV         +R+S   W+
Sbjct: 577 IGWIKLNTDGACKG-RITTGCGGV---------IRNSSGVWI 608



 Score = 65.9 bits (159), Expect(2) = 1e-23
 Identities = 33/80 (41%), Positives = 49/80 (61%)
 Frame = -1

Query: 293 ELWGVLDGLLLARDYVFLKIDVQVHSMIVMSQLSKSGSVSIADASIVNRIRSLLCLDWEV 114
           ELWGVL+GL  A    F  +++ V S+ V+  +    + S+   S++  I  LL  +WEV
Sbjct: 624 ELWGVLEGLRYAWYRGFRFVELDVDSVAVVQAIKSGVATSVIGISLLRSICRLLEEEWEV 683

Query: 113 RFSHCYREANCCADVMASIG 54
           + +H YREAN CAD +A+IG
Sbjct: 684 KIAHSYREANSCADALANIG 703


>gb|PNY15498.1| ribonuclease H [Trifolium pratense]
          Length = 378

 Score = 75.1 bits (183), Expect(2) = 1e-23
 Identities = 38/95 (40%), Positives = 59/95 (62%)
 Frame = -1

Query: 296 AELWGVLDGLLLARDYVFLKIDVQVHSMIVMSQLSKSGSVSIADASIVNRIRSLLCLDWE 117
           AELWGV +GL LARD  F +I++ V S+ V+S +   G  ++    IV  I+ +L L+WE
Sbjct: 262 AELWGVSEGLKLARDRGFQRIELCVDSVSVISIIQNGGGGNVMAHRIVQSIQQMLSLNWE 321

Query: 116 VRFSHCYREANCCADVMASIGYDHEVILCLYEIPP 12
           V+  H YRE N CAD +A++ +     + L+++ P
Sbjct: 322 VKLKHIYREENHCADGLANLAFILPKGIVLFDVCP 356



 Score = 62.4 bits (150), Expect(2) = 1e-23
 Identities = 31/84 (36%), Positives = 42/84 (50%)
 Frame = -2

Query: 577 CHFWWTWRNKECFDPSFSPPHAPWRTVIRACSDYKEASQSKSILNTRSFST*HVKWSPLE 398
           CH+ W WRNKE  D + S P   W  + +   DYK A+     L     +   VKW P  
Sbjct: 156 CHYLWLWRNKETHDSNVSRPPEAWVWIRKIAKDYKIATAMAEELQKGVRTQIQVKWQPPS 215

Query: 397 NDWIRLNSDGAVKGVDKIAGSGGV 326
             W+++N+DGA K  D  A  GG+
Sbjct: 216 IGWVKVNTDGASKS-DGSASCGGL 238


>dbj|GAU25543.1| hypothetical protein TSUD_259770 [Trifolium subterraneum]
          Length = 633

 Score = 71.6 bits (174), Expect(2) = 3e-23
 Identities = 42/101 (41%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
 Frame = -1

Query: 308 DAGFAELWGVLDGLLLARDYVFLKIDVQVHSMIVMSQLSKSGSV-SIADASIVNRIRSLL 132
           +A  AELWGVL+GL   R+  F K+++ + S  V+ Q+ K+G V S    S++ +I  LL
Sbjct: 513 NAFVAELWGVLEGLRFVRNMGFRKVELCIDSQFVV-QVIKNGCVQSSMGVSLLKQIWRLL 571

Query: 131 CLDWEVRFSHCYREANCCADVMASIGYDHEVILCLYEIPPA 9
            LDW V  SH YREAN CAD +A +G      +  +E  P+
Sbjct: 572 DLDWNVEVSHTYREANNCADALAMLGCSLGYEITTFEACPS 612



 Score = 64.7 bits (156), Expect(2) = 3e-23
 Identities = 34/84 (40%), Positives = 47/84 (55%)
 Frame = -2

Query: 577 CHFWWTWRNKECFDPSFSPPHAPWRTVIRACSDYKEASQSKSILNTRSFST*HVKWSPLE 398
           C+  W WRNKE     F  P+ P + V    +DY  A Q+ SI+  RS     + W P  
Sbjct: 411 CYLLWNWRNKELHVEGFLRPNRPVQHVRNMAADYIHAMQNSSIMVNRSQVASRIGWVPPR 470

Query: 397 NDWIRLNSDGAVKGVDKIAGSGGV 326
            D+I+LN+DGA K + ++AG GGV
Sbjct: 471 ADYIKLNTDGASKKM-QLAGCGGV 493


>gb|PNX66369.1| ribonuclease H, partial [Trifolium pratense]
          Length = 252

 Score = 78.2 bits (191), Expect(2) = 3e-23
 Identities = 41/95 (43%), Positives = 58/95 (61%)
 Frame = -1

Query: 296 AELWGVLDGLLLARDYVFLKIDVQVHSMIVMSQLSKSGSVSIADASIVNRIRSLLCLDWE 117
           AELWGVL+GL  A    F ++++ V S +V+  L + G       ++V RI+ +L LDWE
Sbjct: 136 AELWGVLEGLRYANSLGFNRVELNVDSSVVIHVLRRPGYGRPLGGALVMRIQRMLDLDWE 195

Query: 116 VRFSHCYREANCCADVMASIGYDHEVILCLYEIPP 12
           V  +H YREAN CADV+A+IG   +  +  YE  P
Sbjct: 196 VVINHSYREANKCADVLANIGCAIDTHMVYYETCP 230



 Score = 58.2 bits (139), Expect(2) = 3e-23
 Identities = 29/84 (34%), Positives = 39/84 (46%)
 Frame = -2

Query: 577 CHFWWTWRNKECFDPSFSPPHAPWRTVIRACSDYKEASQSKSILNTRSFST*HVKWSPLE 398
           CH  W WRNKE  D  F  P      V      Y +A   + +L+    +   + W P  
Sbjct: 30  CHCLWPWRNKEVRDEQFQRPQHVVTAVTDWVKQYNQAMGLQQVLHNVEKNVVMINWKPPS 89

Query: 397 NDWIRLNSDGAVKGVDKIAGSGGV 326
             W++LN+DGA K    +AG GGV
Sbjct: 90  EGWVKLNTDGAYK-EGSVAGCGGV 112


>dbj|GAU34270.1| hypothetical protein TSUD_321160 [Trifolium subterraneum]
          Length = 1044

 Score = 66.6 bits (161), Expect(2) = 7e-22
 Identities = 37/98 (37%), Positives = 55/98 (56%)
 Frame = -1

Query: 296  AELWGVLDGLLLARDYVFLKIDVQVHSMIVMSQLSKSGSVSIADASIVNRIRSLLCLDWE 117
            AELWGVL+ L       F ++++    + V   L K  S+S    +++ +I  LL LDW 
Sbjct: 928  AELWGVLERLRFVYRLGFRRVELHTDFVAVAQVLQKGSSLSTNGGALLKQIWQLLELDWV 987

Query: 116  VRFSHCYREANCCADVMASIGYDHEVILCLYEIPPAIV 3
            V  S+ YREAN CAD +A++G   +  +  Y+  PAIV
Sbjct: 988  VVVSYTYREANKCADALANLGCTLDCKVEFYDACPAIV 1025



 Score = 65.1 bits (157), Expect(2) = 7e-22
 Identities = 30/85 (35%), Positives = 51/85 (60%)
 Frame = -2

Query: 580  TCHFWWTWRNKECFDPSFSPPHAPWRTVIRACSDYKEASQSKSILNTRSFST*HVKWSPL 401
            +CH  W+WRNKE ++ +FS P  P + V++   +Y +A  + +I+   + S   + W P 
Sbjct: 821  SCHCLWSWRNKEMYEVNFSRPSRPPQHVLKLAEEYFDAVSNNAIVTVSNTSVSEIGWIPP 880

Query: 400  ENDWIRLNSDGAVKGVDKIAGSGGV 326
             + ++RLN+DGA K    +AG GG+
Sbjct: 881  RDLFVRLNTDGAYK-EHVVAGCGGL 904


>gb|PNY06182.1| ribonuclease H [Trifolium pratense]
          Length = 686

 Score = 75.9 bits (185), Expect(2) = 9e-22
 Identities = 38/81 (46%), Positives = 53/81 (65%)
 Frame = -1

Query: 296 AELWGVLDGLLLARDYVFLKIDVQVHSMIVMSQLSKSGSVSIADASIVNRIRSLLCLDWE 117
           AELWGV +GL LAR   F  I++QV S++V+  +      S +   ++NRIR L+ +DW 
Sbjct: 571 AELWGVYEGLCLARRKSFNNIELQVDSLVVVRGIKGEEVGSASGRILLNRIRQLMNMDWN 630

Query: 116 VRFSHCYREANCCADVMASIG 54
           VR SH YREAN  AD +A++G
Sbjct: 631 VRISHVYREANKVADAIAALG 651



 Score = 55.5 bits (132), Expect(2) = 9e-22
 Identities = 28/85 (32%), Positives = 44/85 (51%)
 Frame = -2

Query: 577 CHFWWTWRNKECFDPSFSPPHAPWRTVIRACSDYKEASQSKSILNTRSFST*HVKWSPLE 398
           C++ W WRNK  FD +F  P  P + ++     Y +A     +++  S     ++W   +
Sbjct: 466 CYYIWRWRNKFKFDSNFVRPLHPHKEIMNYVDCYNKAKPVVDVVSASSRRRIDIRWRAPQ 525

Query: 397 NDWIRLNSDGAVKGVDKIAGSGGVF 323
            D I LN+DGA+ G   +AG GG F
Sbjct: 526 RDCICLNTDGALLG--GVAGCGGAF 548


>gb|PNY17666.1| ribonuclease H [Trifolium pratense]
          Length = 856

 Score = 72.0 bits (175), Expect(2) = 1e-21
 Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
 Frame = -1

Query: 341  G*WWCFY---VMK*DAGFAELWGVLDGLLLARDYVFLKIDVQVHSMIVMSQLSKSGSVSI 171
            G W C +   + +  A  AELWG+ DGL +AR   +  +++Q+HS  V+S L+ +   + 
Sbjct: 723  GIWLCSFSRFIGEATAFDAELWGIFDGLTIARRQGYQHVELQIHSHNVVSCLTNNMERN- 781

Query: 170  ADASIVNRIRSLLCLDWEVRFSHCYREANCCADVMASIGYDHEVILCLYEIPPAIV 3
                +V RIRS++  +W V   H YREAN  AD +AS+    +V L LYE PP  V
Sbjct: 782  GLCILVRRIRSIMQENWRVVIKHVYREANKIADGLASLACVTKVSLSLYEQPPTEV 837



 Score = 58.9 bits (141), Expect(2) = 1e-21
 Identities = 31/84 (36%), Positives = 43/84 (51%)
 Frame = -2

Query: 577 CHFWWTWRNKECFDPSFSPPHAPWRTVIRACSDYKEASQSKSILNTRSFST*HVKWSPLE 398
           C+  W WRN+E  D  +S P      + RA +DY    +S++  + R      V+W    
Sbjct: 634 CYMLWRWRNREVHDAEYSRPTNTPVIIRRAVADYDMGLRSQNPEHYREMQRRMVQWQRPA 693

Query: 397 NDWIRLNSDGAVKGVDKIAGSGGV 326
             WI +N+DGA K   KIAGSG V
Sbjct: 694 EGWICINTDGAAKERGKIAGSGRV 717


>dbj|GAU10071.1| hypothetical protein TSUD_422240 [Trifolium subterraneum]
          Length = 306

 Score = 72.4 bits (176), Expect(2) = 1e-21
 Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
 Frame = -1

Query: 296 AELWGVLDGLLLARDYVFLKIDVQVHSMIVMSQLSKSGSVSIADASIVNRIRSLLCLDWE 117
           AELWGVL+GL  AR   F  +++ + S+ V+  +      S     +V +IR  L LDWE
Sbjct: 217 AELWGVLEGLQYARRLGFTAVELNIDSITVVQVIKTGRLSSPIGLPLVKQIRRYLELDWE 276

Query: 116 VRFSHCYREANCCADVMASIG--YDHEVI 36
           +  +H YRE+N CAD +ASIG   D E+I
Sbjct: 277 IMIAHAYRESNKCADALASIGCTLDREII 305



 Score = 58.5 bits (140), Expect(2) = 1e-21
 Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = -2

Query: 577 CHFWWTWRNKECFDPSFSPPHAPWRTVIRACSDYKEASQSKSIL-NTRSFST*HVKWSPL 401
           CH  WTWRNKE  D ++  P    + V +   DY +A +   ++ N+  F T  + W P 
Sbjct: 111 CHCLWTWRNKEMHDNNYVRPSHMVQHVYKIVEDYSQARRVNELMRNSERFFT-QIGWQPP 169

Query: 400 ENDWIRLNSDGAVKGVDKIAGSGGV 326
              +++LN+DGA K  + IAG GG+
Sbjct: 170 CGHFVKLNTDGACKD-NNIAGCGGI 193


>dbj|GAU12910.1| hypothetical protein TSUD_73970 [Trifolium subterraneum]
          Length = 540

 Score = 70.9 bits (172), Expect(2) = 2e-21
 Identities = 36/84 (42%), Positives = 52/84 (61%)
 Frame = -1

Query: 305 AGFAELWGVLDGLLLARDYVFLKIDVQVHSMIVMSQLSKSGSVSIADASIVNRIRSLLCL 126
           AG  ELW V +GL  AR   F +I++ + S+ V+  L+ S S S    +++ +I  LL +
Sbjct: 425 AGCGELWRVYEGLSYARRMGFRQIELHIDSISVVRALNNSSSASSHGGTLLKQIWKLLEM 484

Query: 125 DWEVRFSHCYREANCCADVMASIG 54
           DW V  SH YREAN CAD +A++G
Sbjct: 485 DWIVEISHTYREANKCADALANLG 508



 Score = 59.7 bits (143), Expect(2) = 2e-21
 Identities = 30/82 (36%), Positives = 43/82 (52%)
 Frame = -2

Query: 577 CHFWWTWRNKECFDPSFSPPHAPWRTVIRACSDYKEASQSKSILNTRSFST*HVKWSPLE 398
           CH  W WRNKE F+ +F  P  P + V++   DY  A+    I+  R+     + WSP  
Sbjct: 348 CHCIWNWRNKELFEENFLRPPRPVQHVLKLIGDYMSATSKDDIIALRNQEVTMIGWSPPR 407

Query: 397 NDWIRLNSDGAVKGVDKIAGSG 332
             ++RLN+D A K    +AG G
Sbjct: 408 ELFVRLNTDDAYK-EHVVAGCG 428


>gb|PNY12420.1| ribonuclease H [Trifolium pratense]
          Length = 1341

 Score = 64.7 bits (156), Expect(2) = 4e-21
 Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
 Frame = -1

Query: 296  AELWGVLDGLLLARDYVFLKIDVQVHSMIVMSQLSKSGSVSIADASIVNRIRSLLCLDWE 117
            AELWGVL+GL       F  +++ + S  V+  +      S + A++V +I  +L ++W+
Sbjct: 1225 AELWGVLEGLRYVHHIGFTMVELNIDSEAVVKVVKARQLGSSSGAALVKQIWRMLDMNWK 1284

Query: 116  VRFSHCYREANCCADVMASIG--YDHEVI 36
            V  SH YREAN CAD +A++G   D E+I
Sbjct: 1285 VEISHTYREANKCADALANLGSTLDKELI 1313



 Score = 64.3 bits (155), Expect(2) = 4e-21
 Identities = 31/84 (36%), Positives = 49/84 (58%)
 Frame = -2

Query: 577  CHFWWTWRNKECFDPSFSPPHAPWRTVIRACSDYKEASQSKSILNTRSFST*HVKWSPLE 398
            CH  W WRNK+  D  F  P  P + V++   DY  A  + +++  R+ S   + WSP +
Sbjct: 1119 CHCLWFWRNKDIHDEDFVRPTRPVQQVMKLLGDYMHAFNNNNVVLERTRSIRWIGWSPPK 1178

Query: 397  NDWIRLNSDGAVKGVDKIAGSGGV 326
             ++++LN+DGA K  ++ AG GGV
Sbjct: 1179 MNFVKLNTDGAYK-ENRAAGCGGV 1201


>dbj|GAU31911.1| hypothetical protein TSUD_270960 [Trifolium subterraneum]
          Length = 853

 Score = 70.5 bits (171), Expect(2) = 4e-21
 Identities = 33/92 (35%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
 Frame = -1

Query: 308  DAGFAELWGVLDGLLLARDYVFLKIDVQVHSMIVMSQLSKSGSVSIADASIVNRIRSLLC 129
            +A  AE+WGVL+GL   R   F K+++ + S  V+  +      S   +++  +I  L+ 
Sbjct: 748  NAFIAEMWGVLEGLRYVRRLGFRKVELNIDSAAVVQVIKTGRLQSSTGSALARQIWKLMA 807

Query: 128  LDWEVRFSHCYREANCCADVMASIG--YDHEV 39
            +DWEV  +H YREAN CAD +A++G  +D+++
Sbjct: 808  MDWEVEVNHIYREANKCADALANMGSNFDYDI 839



 Score = 58.5 bits (140), Expect(2) = 4e-21
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
 Frame = -2

Query: 577 CHFW-------WTWRNKECFDPSFSPPHAPWRTVIRACSDYKEASQSKSILNTRSFST*H 419
           C FW       W WRN+E  + SF  P  P   V R   +Y++A  +  +   R+ +   
Sbjct: 639 CSFWALGCFCLWKWRNQELHEDSFVRPSMPVHHVGRMAMEYRKAMSNSELALGRTRAISM 698

Query: 418 VKWSPLENDWIRLNSDGAVKGVDKIAGSGGV 326
           ++WSP + ++++LN+DGA K    IAG GG+
Sbjct: 699 IRWSPPKANFVKLNTDGACK-EHIIAGCGGI 728