BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00026728
         (721 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX99967.1| retrotransposon-related protein [Trifolium pratense]   282   7e-91
gb|PNY04319.1| copia-type polyprotein [Trifolium pratense]            275   4e-89
dbj|GAU25894.1| hypothetical protein TSUD_376130 [Trifolium subt...   289   8e-87
dbj|GAU49921.1| hypothetical protein TSUD_180390 [Trifolium subt...   285   5e-86
gb|PNX54917.1| copia-type polyprotein, partial [Trifolium pratense]   265   2e-85
gb|PNX96991.1| retrotransposon-related protein [Trifolium pratense]   285   3e-85
gb|KOM58598.1| hypothetical protein LR48_Vigan11g163200 [Vigna a...   272   2e-84
gb|KYP66912.1| Retrovirus-related Pol polyprotein from transposo...   277   3e-84
dbj|GAU36721.1| hypothetical protein TSUD_318190 [Trifolium subt...   278   3e-83
dbj|GAU33426.1| hypothetical protein TSUD_380620 [Trifolium subt...   273   7e-82
gb|KYP69348.1| Retrovirus-related Pol polyprotein from transposo...   257   1e-81
dbj|GAU50842.1| hypothetical protein TSUD_232190 [Trifolium subt...   270   2e-80
dbj|GAU23292.1| hypothetical protein TSUD_237460 [Trifolium subt...   268   2e-80
dbj|GAU32293.1| hypothetical protein TSUD_63100 [Trifolium subte...   266   3e-78
dbj|GAU22770.1| hypothetical protein TSUD_129820 [Trifolium subt...   265   3e-78
gb|PNX95963.1| retrotransposon-related protein, partial [Trifoli...   265   4e-78
dbj|GAU35215.1| hypothetical protein TSUD_204910 [Trifolium subt...   264   5e-78
gb|KYP47011.1| Retrovirus-related Pol polyprotein from transposo...   249   6e-78
dbj|GAU38708.1| hypothetical protein TSUD_396360 [Trifolium subt...   261   8e-78
gb|PNY07702.1| putative copia-type polyprotein, partial [Trifoli...   252   9e-78

>gb|PNX99967.1| retrotransposon-related protein [Trifolium pratense]
          Length = 388

 Score =  282 bits (721), Expect = 7e-91
 Identities = 134/204 (65%), Positives = 160/204 (78%)
 Frame = -2

Query: 612 DFDMAMDNQVTNDGDLIHFAMVADMEPLDYEEALKSKEWKRAMKEELASIEKNGTWTLTK 433
           D ++  DN V  +GDLIHFA++AD EP+D++ ALKSK WK+AM+EEL SIEKN TW L  
Sbjct: 163 DCEITQDNAVNEEGDLIHFALLADSEPIDFKMALKSKVWKKAMEEELKSIEKNKTWKLVN 222

Query: 432 LPKGKRAISVKWVFKLKFDPIGNVVKYKARLVARGFQQKQGIDYTEVFAPVARHETIRLV 253
           LP  K+ I VKWVFKLK +P G V K KARLVARGF QK GIDY EVFAPVAR ET+RLV
Sbjct: 223 LPDKKKKIDVKWVFKLKLNPDGTVSKDKARLVARGFLQKHGIDYNEVFAPVARIETVRLV 282

Query: 252 TALACSKGWNMYHMDVKSAFLNGTLEEEVYINQPPGFTETGKEDHVLHLHKALYGLKQAP 73
            ALAC   W++YH+DVKSAF+NG L+EEV+++QPPGF   GKE+ V  L+KALYGLKQAP
Sbjct: 283 VALACKSRWSLYHLDVKSAFMNGPLDEEVFVSQPPGFEVHGKENMVYKLYKALYGLKQAP 342

Query: 72  RAWNKRIDAFFVQNGFSRCTTEYG 1
           RAWNKRID F +Q GF +C  E+G
Sbjct: 343 RAWNKRIDDFLIQIGFRKCAAEFG 366


>gb|PNY04319.1| copia-type polyprotein [Trifolium pratense]
          Length = 316

 Score =  275 bits (703), Expect = 4e-89
 Identities = 129/204 (63%), Positives = 159/204 (77%)
 Frame = -2

Query: 612 DFDMAMDNQVTNDGDLIHFAMVADMEPLDYEEALKSKEWKRAMKEELASIEKNGTWTLTK 433
           D ++  DN V ++G+LIHFA +AD EP+++ +ALKS  WK+AM+E+L SIEKN TW L  
Sbjct: 98  DCEVTNDNAVNDEGELIHFAQLADSEPVNFRDALKSNVWKKAMEEKLKSIEKNQTWKLVA 157

Query: 432 LPKGKRAISVKWVFKLKFDPIGNVVKYKARLVARGFQQKQGIDYTEVFAPVARHETIRLV 253
           LP  K+ I VKWVFK+K +P G + K+KARLVARGF QK GIDY E+FAPVAR ET+RLV
Sbjct: 158 LPDKKKKIDVKWVFKVKMNPDGTISKHKARLVARGFLQKHGIDYNEMFAPVARLETVRLV 217

Query: 252 TALACSKGWNMYHMDVKSAFLNGTLEEEVYINQPPGFTETGKEDHVLHLHKALYGLKQAP 73
            ALAC   W MYH+DVKSAFLNG LE+EV+++QPPGF   GKE+ V  LHKALYGLKQ+P
Sbjct: 218 IALACKNKWLMYHLDVKSAFLNGPLEDEVFVSQPPGFEIKGKENMVYKLHKALYGLKQSP 277

Query: 72  RAWNKRIDAFFVQNGFSRCTTEYG 1
           RAWNKRID F +Q GF +C  E+G
Sbjct: 278 RAWNKRIDEFLIQIGFKKCIVEFG 301


>dbj|GAU25894.1| hypothetical protein TSUD_376130 [Trifolium subterraneum]
          Length = 1192

 Score =  289 bits (739), Expect = 8e-87
 Identities = 138/206 (66%), Positives = 163/206 (79%)
 Frame = -2

Query: 618  MLDFDMAMDNQVTNDGDLIHFAMVADMEPLDYEEALKSKEWKRAMKEELASIEKNGTWTL 439
            + D DM  DN V N+G+++H+AM+AD EPLD + ALKSK W  AM +EL SIEKN TW +
Sbjct: 650  LADCDMVPDNVVDNEGNIVHYAMLADTEPLDVKSALKSKVWLEAMIDELKSIEKNRTWDM 709

Query: 438  TKLPKGKRAISVKWVFKLKFDPIGNVVKYKARLVARGFQQKQGIDYTEVFAPVARHETIR 259
             KLP  KRAI VKWV+KLK +P G V+K+KARLVA+GF Q QG+D  EVF+PVARHETIR
Sbjct: 710  CKLPSDKRAIDVKWVYKLKQNPEGQVIKHKARLVAKGFLQNQGLDNDEVFSPVARHETIR 769

Query: 258  LVTALACSKGWNMYHMDVKSAFLNGTLEEEVYINQPPGFTETGKEDHVLHLHKALYGLKQ 79
            LV ALACS+ W M+H+DVKSAFLNG LEE+VY+ QPPGF   GKED VL L+KALYGLKQ
Sbjct: 770  LVIALACSRRWPMFHLDVKSAFLNGPLEEDVYVKQPPGFELKGKEDRVLKLNKALYGLKQ 829

Query: 78   APRAWNKRIDAFFVQNGFSRCTTEYG 1
            APRAWNKRID F V  GF +C+ EYG
Sbjct: 830  APRAWNKRIDQFLVMQGFVKCSVEYG 855


>dbj|GAU49921.1| hypothetical protein TSUD_180390 [Trifolium subterraneum]
          Length = 1045

 Score =  285 bits (729), Expect = 5e-86
 Identities = 135/206 (65%), Positives = 163/206 (79%)
 Frame = -2

Query: 618  MLDFDMAMDNQVTNDGDLIHFAMVADMEPLDYEEALKSKEWKRAMKEELASIEKNGTWTL 439
            + D DM  DN + N+G+++H+AM+AD EPLD + ALKSK W  AM +EL SIEKN TW +
Sbjct: 596  LADCDMVPDNVIDNEGNIVHYAMLADTEPLDVKSALKSKVWLEAMIDELKSIEKNKTWDM 655

Query: 438  TKLPKGKRAISVKWVFKLKFDPIGNVVKYKARLVARGFQQKQGIDYTEVFAPVARHETIR 259
             KLP  KRAI VKWV+KLK +P G V+K+KARLVA+GF QKQG+DY EVF+PVARHETIR
Sbjct: 656  CKLPSDKRAIDVKWVYKLKQNPEGQVIKHKARLVAKGFLQKQGLDYDEVFSPVARHETIR 715

Query: 258  LVTALACSKGWNMYHMDVKSAFLNGTLEEEVYINQPPGFTETGKEDHVLHLHKALYGLKQ 79
            LV ALACS+ W M+H+DVKSAFLNG LE++VY+ QP  F   GKED VL L+K+LYGLKQ
Sbjct: 716  LVIALACSRRWPMFHLDVKSAFLNGPLEDDVYVKQPLDFELKGKEDRVLKLNKSLYGLKQ 775

Query: 78   APRAWNKRIDAFFVQNGFSRCTTEYG 1
            APRAWNKRID F V  GF +C+ EYG
Sbjct: 776  APRAWNKRIDQFLVMQGFVKCSVEYG 801


>gb|PNX54917.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 314

 Score =  265 bits (678), Expect = 2e-85
 Identities = 126/204 (61%), Positives = 155/204 (75%)
 Frame = -2

Query: 612 DFDMAMDNQVTNDGDLIHFAMVADMEPLDYEEALKSKEWKRAMKEELASIEKNGTWTLTK 433
           D ++  DN V ++GDLIHFA++AD EP+++ +ALKS  WK+AM+EEL SIEKN TW L  
Sbjct: 29  DCEITQDNAVNDEGDLIHFALLADSEPVNFRDALKSNIWKKAMEEELKSIEKNQTWKLVV 88

Query: 432 LPKGKRAISVKWVFKLKFDPIGNVVKYKARLVARGFQQKQGIDYTEVFAPVARHETIRLV 253
           LP  K+ I VK VFK+K +P G + K+KARLVARGF QK GIDY E+FAPVAR E +RLV
Sbjct: 89  LPYKKKKIDVKSVFKVKLNPDGTISKHKARLVARGFLQKHGIDYNEIFAPVARFEIVRLV 148

Query: 252 TALACSKGWNMYHMDVKSAFLNGTLEEEVYINQPPGFTETGKEDHVLHLHKALYGLKQAP 73
            +L+C   W MYH+DVKSAFLNG LEEEV+++Q PGF   GKE  V  LHKALYGLKQAP
Sbjct: 149 VSLSCKNKWLMYHLDVKSAFLNGPLEEEVFVSQHPGFEIKGKETMVYKLHKALYGLKQAP 208

Query: 72  RAWNKRIDAFFVQNGFSRCTTEYG 1
           RAWN +ID F +Q GF +C  E+G
Sbjct: 209 RAWNNKIDEFLIQIGFKKCIVEFG 232


>gb|PNX96991.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1333

 Score =  285 bits (730), Expect = 3e-85
 Identities = 133/206 (64%), Positives = 162/206 (78%)
 Frame = -2

Query: 618  MLDFDMAMDNQVTNDGDLIHFAMVADMEPLDYEEALKSKEWKRAMKEELASIEKNGTWTL 439
            + D +M  DN V ++GD++H+AM+A+ EP++  +ALKSK W  AM EEL SIEKN TW L
Sbjct: 791  LADCEMLQDNAVNSEGDIVHYAMLANTEPINVSDALKSKVWLEAMNEELKSIEKNKTWEL 850

Query: 438  TKLPKGKRAISVKWVFKLKFDPIGNVVKYKARLVARGFQQKQGIDYTEVFAPVARHETIR 259
              LP  K+AI VKWV+K K +P G V+K+KARLVA+GF QKQG+DY EVF+PVARHETIR
Sbjct: 851  CMLPADKKAIDVKWVYKAKQNPEGKVIKHKARLVAKGFLQKQGLDYDEVFSPVARHETIR 910

Query: 258  LVTALACSKGWNMYHMDVKSAFLNGTLEEEVYINQPPGFTETGKEDHVLHLHKALYGLKQ 79
            LV ALACS+ W ++H+DVKSAFLNG LEE+VY+ QPPGF   GK D VL LHKALYGLKQ
Sbjct: 911  LVIALACSRRWPLFHLDVKSAFLNGPLEEDVYVKQPPGFELKGKGDKVLKLHKALYGLKQ 970

Query: 78   APRAWNKRIDAFFVQNGFSRCTTEYG 1
            APRAWNKRID+F    GF +C+ EYG
Sbjct: 971  APRAWNKRIDSFLAMQGFKKCSVEYG 996


>gb|KOM58598.1| hypothetical protein LR48_Vigan11g163200 [Vigna angularis]
          Length = 604

 Score =  272 bits (695), Expect = 2e-84
 Identities = 125/204 (61%), Positives = 158/204 (77%)
 Frame = -2

Query: 612 DFDMAMDNQVTNDGDLIHFAMVADMEPLDYEEALKSKEWKRAMKEELASIEKNGTWTLTK 433
           D+++  D  V+++GDL+H A++A  EP+D +EA+   EWK AM EEL SIEKN TW+L  
Sbjct: 66  DYELYTDTGVSDEGDLVHMALMAGTEPIDVDEAMAETEWKEAMIEELKSIEKNRTWSLVD 125

Query: 432 LPKGKRAISVKWVFKLKFDPIGNVVKYKARLVARGFQQKQGIDYTEVFAPVARHETIRLV 253
           LP GK+ I +KWVFK K +P G V+K+KARLVARGF Q++GID+TEVFAPVAR ETIR+V
Sbjct: 126 LPHGKKCIGLKWVFKRKLNPDGTVLKHKARLVARGFLQRKGIDFTEVFAPVARLETIRVV 185

Query: 252 TALACSKGWNMYHMDVKSAFLNGTLEEEVYINQPPGFTETGKEDHVLHLHKALYGLKQAP 73
            A+AC+K W+M  +DVKSAFL+G LEEEVY+ QPPGF    KE  V  LHKALYGL+Q P
Sbjct: 186 IAIACAKRWSMIQLDVKSAFLHGPLEEEVYVQQPPGFNRVNKEQQVYKLHKALYGLRQTP 245

Query: 72  RAWNKRIDAFFVQNGFSRCTTEYG 1
           RAWN+RID FF+ +GF RC  E+G
Sbjct: 246 RAWNRRIDGFFLDHGFKRCVVEHG 269


>gb|KYP66912.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 861

 Score =  277 bits (709), Expect = 3e-84
 Identities = 130/204 (63%), Positives = 163/204 (79%)
 Frame = -2

Query: 612 DFDMAMDNQVTNDGDLIHFAMVADMEPLDYEEALKSKEWKRAMKEELASIEKNGTWTLTK 433
           D+++ +D+QVT +GDL+H A+ A+MEP+ +EEA+K   W  AM+EEL SIEKN TW LT 
Sbjct: 321 DYEVFLDSQVTTEGDLVHMALSAEMEPVSFEEAVKETHWMEAMREELRSIEKNQTWKLTP 380

Query: 432 LPKGKRAISVKWVFKLKFDPIGNVVKYKARLVARGFQQKQGIDYTEVFAPVARHETIRLV 253
           LP GK+AI+V+WV+K+K +  G V KYKARLVA+GF Q+QG+DY EVFAPVAR ETIRLV
Sbjct: 381 LPMGKKAITVRWVYKVKLNSKGEVAKYKARLVAKGFLQRQGLDYDEVFAPVARLETIRLV 440

Query: 252 TALACSKGWNMYHMDVKSAFLNGTLEEEVYINQPPGFTETGKEDHVLHLHKALYGLKQAP 73
            ++A    W ++ MDVKSAFLNG LEEEV+++QPPGF   GK+  V  LHKALYGLKQAP
Sbjct: 441 VSMASYHCWPIHQMDVKSAFLNGPLEEEVFVSQPPGFEIKGKKKQVYRLHKALYGLKQAP 500

Query: 72  RAWNKRIDAFFVQNGFSRCTTEYG 1
           RAWNKRID+F +Q GF +CTTEYG
Sbjct: 501 RAWNKRIDSFLLQLGFVKCTTEYG 524


>dbj|GAU36721.1| hypothetical protein TSUD_318190 [Trifolium subterraneum]
          Length = 1087

 Score =  278 bits (711), Expect = 3e-83
 Identities = 133/206 (64%), Positives = 160/206 (77%)
 Frame = -2

Query: 618  MLDFDMAMDNQVTNDGDLIHFAMVADMEPLDYEEALKSKEWKRAMKEELASIEKNGTWTL 439
            + D DM  DN V N+G+++H+AM+AD EPLD + ALKSK W   M +EL SIEKN TW +
Sbjct: 761  LADCDMVPDNVVDNEGNIVHYAMLADTEPLDVKSALKSKVWLEVMIDELKSIEKNRTWDI 820

Query: 438  TKLPKGKRAISVKWVFKLKFDPIGNVVKYKARLVARGFQQKQGIDYTEVFAPVARHETIR 259
             KLP  KRAI VKWV+KLK +P G V+K+KARLVA+GF QKQ ++Y EVF+PVARHETIR
Sbjct: 821  CKLPSYKRAIDVKWVYKLKQNPEGQVIKHKARLVAKGFLQKQRLEYDEVFSPVARHETIR 880

Query: 258  LVTALACSKGWNMYHMDVKSAFLNGTLEEEVYINQPPGFTETGKEDHVLHLHKALYGLKQ 79
            LV AL  S+ W M+H+DVKSAFLNG LEE+VY+ QPPGF   G ED VL L+KALYGLKQ
Sbjct: 881  LVIALGSSRRWPMFHLDVKSAFLNGPLEEDVYVKQPPGFELKGMEDRVLKLNKALYGLKQ 940

Query: 78   APRAWNKRIDAFFVQNGFSRCTTEYG 1
            APRAWNKRID F V  GF +C+ +YG
Sbjct: 941  APRAWNKRIDQFLVMQGFVKCSVKYG 966


>dbj|GAU33426.1| hypothetical protein TSUD_380620 [Trifolium subterraneum]
          Length = 990

 Score =  273 bits (698), Expect = 7e-82
 Identities = 129/193 (66%), Positives = 155/193 (80%)
 Frame = -2

Query: 579  NDGDLIHFAMVADMEPLDYEEALKSKEWKRAMKEELASIEKNGTWTLTKLPKGKRAISVK 400
            N+G+++H+ M+AD EPLD + ALKSK W  AM +EL SIEKN TW + KLP  KRAI+VK
Sbjct: 782  NEGNIVHYVMLADTEPLDVKSALKSKVWLEAMIDELKSIEKNKTWDMCKLPSDKRAINVK 841

Query: 399  WVFKLKFDPIGNVVKYKARLVARGFQQKQGIDYTEVFAPVARHETIRLVTALACSKGWNM 220
            WV+KLK +P G V+K+KARLVA+GF QKQG+DY EVF+PVARHETIRLV ALACS+ W+M
Sbjct: 842  WVYKLKQNPEGQVIKHKARLVAKGFLQKQGLDYDEVFSPVARHETIRLVIALACSRRWSM 901

Query: 219  YHMDVKSAFLNGTLEEEVYINQPPGFTETGKEDHVLHLHKALYGLKQAPRAWNKRIDAFF 40
            +H+DVKSAFLNG LEE+VY+ QP GF   GKED VL L+KALY L QAPRAWNKRID F 
Sbjct: 902  FHLDVKSAFLNGPLEEDVYVKQPHGFELKGKEDRVLKLNKALYSLMQAPRAWNKRIDQFL 961

Query: 39   VQNGFSRCTTEYG 1
            V   F +C+ EYG
Sbjct: 962  VMQDFVKCSVEYG 974


>gb|KYP69348.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 342

 Score =  257 bits (656), Expect = 1e-81
 Identities = 123/204 (60%), Positives = 154/204 (75%)
 Frame = -2

Query: 612 DFDMAMDNQVTNDGDLIHFAMVADMEPLDYEEALKSKEWKRAMKEELASIEKNGTWTLTK 433
           D+D+  ++ V ++GDL+H A+ +++EP+ +EEA+   +W  AMK+EL SIEKN TW L  
Sbjct: 35  DYDIFSESTVNSEGDLVHLALFSEIEPVSFEEAMDDPKWIEAMKDELRSIEKNKTWELVS 94

Query: 432 LPKGKRAISVKWVFKLKFDPIGNVVKYKARLVARGFQQKQGIDYTEVFAPVARHETIRLV 253
           LP  K++I VKWV+K+K  P G V KYKARLVA+GF QK GIDY +VFAPVAR ET+RLV
Sbjct: 95  LPLQKKSIDVKWVYKVKEKPKGEVAKYKARLVAKGFLQKAGIDYGDVFAPVARIETVRLV 154

Query: 252 TALACSKGWNMYHMDVKSAFLNGTLEEEVYINQPPGFTETGKEDHVLHLHKALYGLKQAP 73
            ALA  KGW MY +DVKSAFLNG +EEEVY+ QPPGF   G+E+ V  L K LYGLKQAP
Sbjct: 155 VALASLKGWPMYQLDVKSAFLNGEIEEEVYVAQPPGFKIKGQEEKVYKLRKDLYGLKQAP 214

Query: 72  RAWNKRIDAFFVQNGFSRCTTEYG 1
           RAWNKRID+F  Q  F +CT E+G
Sbjct: 215 RAWNKRIDSFLHQMKFIKCTYEHG 238


>dbj|GAU50842.1| hypothetical protein TSUD_232190 [Trifolium subterraneum]
          Length = 1078

 Score =  270 bits (690), Expect = 2e-80
 Identities = 126/206 (61%), Positives = 158/206 (76%)
 Frame = -2

Query: 618  MLDFDMAMDNQVTNDGDLIHFAMVADMEPLDYEEALKSKEWKRAMKEELASIEKNGTWTL 439
            + D +  +DN V +DGDL+H A +AD+EP+++ EAL    WK+AM EE+ S+EKN TW L
Sbjct: 536  LTDHETILDNVVNDDGDLVHLAFMADVEPINWHEALSDPNWKKAMDEEIKSLEKNNTWRL 595

Query: 438  TKLPKGKRAISVKWVFKLKFDPIGNVVKYKARLVARGFQQKQGIDYTEVFAPVARHETIR 259
              LP  KR I+VKW+FK+K +P G +VK+KARLVARGF Q+QGIDY EV+APVAR ETIR
Sbjct: 596  VDLPAQKRPITVKWIFKIKRNPDGGIVKHKARLVARGFLQQQGIDYNEVYAPVARMETIR 655

Query: 258  LVTALACSKGWNMYHMDVKSAFLNGTLEEEVYINQPPGFTETGKEDHVLHLHKALYGLKQ 79
            LV A+A S  W++ HMDVKSAFLNG LEEEVY++QPPGF    ++D V  L KALYGLKQ
Sbjct: 656  LVIAIASSMNWSLSHMDVKSAFLNGPLEEEVYVSQPPGFEVDAQKDKVYKLQKALYGLKQ 715

Query: 78   APRAWNKRIDAFFVQNGFSRCTTEYG 1
            APRAWNKRID F  + GF +C+ E+G
Sbjct: 716  APRAWNKRIDTFMHKEGFVKCSVEFG 741


>dbj|GAU23292.1| hypothetical protein TSUD_237460 [Trifolium subterraneum]
          Length = 958

 Score =  268 bits (686), Expect = 2e-80
 Identities = 125/206 (60%), Positives = 157/206 (76%)
 Frame = -2

Query: 618  MLDFDMAMDNQVTNDGDLIHFAMVADMEPLDYEEALKSKEWKRAMKEELASIEKNGTWTL 439
            + D +  +DN V +DGDL+H A +AD+EP+++ EAL    WK AM EE+ SIEKN TW L
Sbjct: 570  LTDHETILDNVVNDDGDLVHLAFMADVEPVNWHEALSDPNWKNAMNEEITSIEKNNTWRL 629

Query: 438  TKLPKGKRAISVKWVFKLKFDPIGNVVKYKARLVARGFQQKQGIDYTEVFAPVARHETIR 259
              LP  K+ I+VKW+FK+K +P G +VK+K RLVARGF Q+QGIDY EV+APVAR ETIR
Sbjct: 630  VDLPAQKKIITVKWIFKIKRNPDGGIVKHKVRLVARGFLQQQGIDYNEVYAPVARMETIR 689

Query: 258  LVTALACSKGWNMYHMDVKSAFLNGTLEEEVYINQPPGFTETGKEDHVLHLHKALYGLKQ 79
            LV A+A S  W++ HMDVKSAFLNG+LEEEVY++QPPGF    ++D V  L KALYGLKQ
Sbjct: 690  LVIAIASSMNWSLSHMDVKSAFLNGSLEEEVYVSQPPGFEVDAQKDKVYKLQKALYGLKQ 749

Query: 78   APRAWNKRIDAFFVQNGFSRCTTEYG 1
            APRAWNKRID F  + GF +C+ E+G
Sbjct: 750  APRAWNKRIDTFLHKEGFVKCSVEFG 775


>dbj|GAU32293.1| hypothetical protein TSUD_63100 [Trifolium subterraneum]
          Length = 1342

 Score =  266 bits (680), Expect = 3e-78
 Identities = 125/204 (61%), Positives = 156/204 (76%)
 Frame = -2

Query: 612  DFDMAMDNQVTNDGDLIHFAMVADMEPLDYEEALKSKEWKRAMKEELASIEKNGTWTLTK 433
            D +  +DN V +DGDL+H A +AD+EP+++ EAL    WK+AM EE+ SIEKN TW L  
Sbjct: 842  DHETILDNVVNDDGDLVHLAFMADIEPVNWHEALSDPNWKKAMNEEIKSIEKNNTWRLVD 901

Query: 432  LPKGKRAISVKWVFKLKFDPIGNVVKYKARLVARGFQQKQGIDYTEVFAPVARHETIRLV 253
            LP  K+ I+VKW+FK+K +P G +VK+KARLVARGF Q+QGIDY EV+APVAR ETIRLV
Sbjct: 902  LPAQKKPITVKWIFKIKRNPDGGIVKHKARLVARGFLQQQGIDYNEVYAPVARMETIRLV 961

Query: 252  TALACSKGWNMYHMDVKSAFLNGTLEEEVYINQPPGFTETGKEDHVLHLHKALYGLKQAP 73
             A+A S  W+  HMDVKSAFLNG LEEEVY++QPPGF    ++D V  L +ALYGLKQAP
Sbjct: 962  IAIASSMNWSPSHMDVKSAFLNGPLEEEVYVSQPPGFEVDAQKDKVYKLQEALYGLKQAP 1021

Query: 72   RAWNKRIDAFFVQNGFSRCTTEYG 1
            RAWNKRID F  + GF +C+ E+G
Sbjct: 1022 RAWNKRIDTFLHKEGFVKCSVEFG 1045


>dbj|GAU22770.1| hypothetical protein TSUD_129820 [Trifolium subterraneum]
          Length = 1125

 Score =  265 bits (676), Expect = 3e-78
 Identities = 127/204 (62%), Positives = 157/204 (76%)
 Frame = -2

Query: 612  DFDMAMDNQVTNDGDLIHFAMVADMEPLDYEEALKSKEWKRAMKEELASIEKNGTWTLTK 433
            D +   D+ V +DGDL+H A +AD EP+++ EA+   +W +AMK+EL SIEKN TW L +
Sbjct: 589  DHETITDDAVNDDGDLVHLAFMADSEPINWNEAVACPKWNQAMKDELLSIEKNHTWKLVE 648

Query: 432  LPKGKRAISVKWVFKLKFDPIGNVVKYKARLVARGFQQKQGIDYTEVFAPVARHETIRLV 253
            LP  K+AISVKWVFKLK +P G++VK+KARLVARGF Q+QGID+TE +APVAR ETIRLV
Sbjct: 649  LPPHKKAISVKWVFKLKKNPDGSIVKHKARLVARGFLQQQGIDFTEFYAPVARMETIRLV 708

Query: 252  TALACSKGWNMYHMDVKSAFLNGTLEEEVYINQPPGFTETGKEDHVLHLHKALYGLKQAP 73
             A+A S  W ++HMDVKSAFLNG L+EEVY++QPPGF      D V  L KALYGLKQAP
Sbjct: 709  VAIASSFDWPLFHMDVKSAFLNGPLQEEVYVSQPPGFEVESHMDKVYKLEKALYGLKQAP 768

Query: 72   RAWNKRIDAFFVQNGFSRCTTEYG 1
            RAWNKRID F  + GF +CT E+G
Sbjct: 769  RAWNKRIDDFLHKEGFVKCTVEFG 792


>gb|PNX95963.1| retrotransposon-related protein, partial [Trifolium pratense]
          Length = 1290

 Score =  265 bits (678), Expect = 4e-78
 Identities = 128/204 (62%), Positives = 158/204 (77%)
 Frame = -2

Query: 612  DFDMAMDNQVTNDGDLIHFAMVADMEPLDYEEALKSKEWKRAMKEELASIEKNGTWTLTK 433
            D ++  D+ V  DGDL+H A +AD EP++++EA+   +W  AM+EEL SIEKN TW L +
Sbjct: 793  DHEITSDSAVNEDGDLVHLAFMADSEPINWKEAVACSKWNAAMQEELHSIEKNNTWKLVE 852

Query: 432  LPKGKRAISVKWVFKLKFDPIGNVVKYKARLVARGFQQKQGIDYTEVFAPVARHETIRLV 253
            LP  K+AISVKWVFKLK +P G +VK+KARLVARGF Q++GIDYTEV+APVAR ETIRLV
Sbjct: 853  LPPQKKAISVKWVFKLKRNPDGEIVKHKARLVARGFLQQEGIDYTEVYAPVARMETIRLV 912

Query: 252  TALACSKGWNMYHMDVKSAFLNGTLEEEVYINQPPGFTETGKEDHVLHLHKALYGLKQAP 73
             A+A S   ++YHMDVKSAFLNG LEEEVY+ QPPGF    +++ V  L KALYGLKQAP
Sbjct: 913  IAIASSYNLSLYHMDVKSAFLNGPLEEEVYVMQPPGFELESEKNKVYKLDKALYGLKQAP 972

Query: 72   RAWNKRIDAFFVQNGFSRCTTEYG 1
            RAWNKRID F  + GF +CT E+G
Sbjct: 973  RAWNKRIDEFLQKEGFVKCTVEFG 996


>dbj|GAU35215.1| hypothetical protein TSUD_204910 [Trifolium subterraneum]
          Length = 1149

 Score =  264 bits (675), Expect = 5e-78
 Identities = 125/204 (61%), Positives = 154/204 (75%)
 Frame = -2

Query: 612  DFDMAMDNQVTNDGDLIHFAMVADMEPLDYEEALKSKEWKRAMKEELASIEKNGTWTLTK 433
            DF+   DN +  DGDL+HFA+  D EP+ +EEA+ S  WK+AMKEE+ +IEKN TW LT 
Sbjct: 607  DFETYNDNAINTDGDLVHFALFVDSEPVSFEEAISSDVWKKAMKEEIEAIEKNNTWFLTD 666

Query: 432  LPKGKRAISVKWVFKLKFDPIGNVVKYKARLVARGFQQKQGIDYTEVFAPVARHETIRLV 253
            LP  K  I+VKWV+K+K D  G++ KYKARLVA+GF QK G+DY EV+APVAR ETIRLV
Sbjct: 667  LPANKHQIAVKWVYKVKLDSNGSISKYKARLVAKGFLQKAGLDYQEVYAPVARIETIRLV 726

Query: 252  TALACSKGWNMYHMDVKSAFLNGTLEEEVYINQPPGFTETGKEDHVLHLHKALYGLKQAP 73
             A+A  K W++  MDVKSAFLNG L+EEVY+ QPPGF + G E  V  L+KALYGLKQAP
Sbjct: 727  IAIASVKKWSLSQMDVKSAFLNGPLDEEVYVAQPPGFEKKGSEGMVYKLNKALYGLKQAP 786

Query: 72   RAWNKRIDAFFVQNGFSRCTTEYG 1
            RAWNKRID+F +Q GF +   E+G
Sbjct: 787  RAWNKRIDSFLIQIGFKKSAVEHG 810


>gb|KYP47011.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 409

 Score =  249 bits (637), Expect = 6e-78
 Identities = 117/205 (57%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
 Frame = -2

Query: 612 DFDMAMDNQVTNDGDLI-HFAMVADMEPLDYEEALKSKEWKRAMKEELASIEKNGTWTLT 436
           D+ +  D+ +T +GDL+ H A++ DMEP+ +EEA+  + W+ AM+EEL SIEKN TW + 
Sbjct: 169 DYQVYHDSAITEEGDLVQHMALMTDMEPITFEEAISKEVWRSAMEEELKSIEKNDTWEMV 228

Query: 435 KLPKGKRAISVKWVFKLKFDPIGNVVKYKARLVARGFQQKQGIDYTEVFAPVARHETIRL 256
            LP+ K+ I VKWVFK K    G++ K+KARLVA+GF QK+GIDY+EVFAPVAR ET+RL
Sbjct: 229 NLPQNKKVIVVKWVFKTKLKSDGSIAKHKARLVAKGFMQKEGIDYSEVFAPVARLETVRL 288

Query: 255 VTALACSKGWNMYHMDVKSAFLNGTLEEEVYINQPPGFTETGKEDHVLHLHKALYGLKQA 76
           + ALA  + W ++ +DVKSAFLNG+L+EEV++ QPPGF   GKE  VL L KALYGLKQA
Sbjct: 289 IVALASWRNWKLWQLDVKSAFLNGSLDEEVFVAQPPGFICKGKELKVLRLKKALYGLKQA 348

Query: 75  PRAWNKRIDAFFVQNGFSRCTTEYG 1
            +AWNKRID+F    GF +C+ E+G
Sbjct: 349 LKAWNKRIDSFLTGFGFQKCSVEHG 373


>dbj|GAU38708.1| hypothetical protein TSUD_396360 [Trifolium subterraneum]
          Length = 920

 Score =  261 bits (667), Expect = 8e-78
 Identities = 123/205 (60%), Positives = 158/205 (77%), Gaps = 1/205 (0%)
 Frame = -2

Query: 612 DFDMAMDNQVTNDGDLIHFAMVADMEPLDYEEALKSKEWKRAMKEELASIEKNGTWTLTK 433
           ++++  DN+V  +GDL+H A +AD EP++  EALKS +WK AMKEEL SIE N TW+LT+
Sbjct: 379 EYEITQDNEVNEEGDLVHLAFLADSEPVNDSEALKSSKWKEAMKEELRSIENNNTWSLTE 438

Query: 432 LPKGKRAISVKWVFKLKFDPIGNVVKYKARLVARGFQQKQGIDYTEVFAPVARHETIRLV 253
           LP  K+AI+VKWV+K+K  P G + ++KARLVA+GF Q++GIDY EV+APVAR ETIRLV
Sbjct: 439 LPPMKKAIAVKWVYKVKMSPQGEITRHKARLVAKGFLQREGIDYEEVYAPVARIETIRLV 498

Query: 252 TALACSKGWNMYHMDVKSAFL-NGTLEEEVYINQPPGFTETGKEDHVLHLHKALYGLKQA 76
            A+A S  W+++ MDVK AFL NG L EEV++ QPPGF   G+ + V  LHKALYGLKQA
Sbjct: 499 VAMANSNNWSIHQMDVKCAFLKNGPLSEEVFVKQPPGFEVKGQTNKVYKLHKALYGLKQA 558

Query: 75  PRAWNKRIDAFFVQNGFSRCTTEYG 1
           PRAWNKRID +  Q GF +C TE+G
Sbjct: 559 PRAWNKRIDGYLSQIGFIKCVTEHG 583


>gb|PNY07702.1| putative copia-type polyprotein, partial [Trifolium pratense]
          Length = 505

 Score =  252 bits (643), Expect = 9e-78
 Identities = 115/204 (56%), Positives = 152/204 (74%)
 Frame = -2

Query: 612 DFDMAMDNQVTNDGDLIHFAMVADMEPLDYEEALKSKEWKRAMKEELASIEKNGTWTLTK 433
           D  +  DN++T +GDL+H A  A+ EP+++E+A+K ++W  +M EE+ SIE+N TW L  
Sbjct: 5   DCIVTRDNEITTEGDLVHLAFNAETEPVNFEDAVKDEKWLASMNEEIESIERNDTWKLVN 64

Query: 432 LPKGKRAISVKWVFKLKFDPIGNVVKYKARLVARGFQQKQGIDYTEVFAPVARHETIRLV 253
           LP GK+AI VKWV+K+K +P G  +++KARLV +GF QK+GID+ E+FAPV R +TIRLV
Sbjct: 65  LPNGKKAIGVKWVYKVKVNPKGETIRHKARLVVKGFLQKEGIDFNEMFAPVVRMDTIRLV 124

Query: 252 TALACSKGWNMYHMDVKSAFLNGTLEEEVYINQPPGFTETGKEDHVLHLHKALYGLKQAP 73
           TA+A    W+M+ MDVK  F+NG LEEEVY+ QPPGF + G E  V  L+KALYGLKQAP
Sbjct: 125 TAIAHYNKWSMHQMDVKCTFMNGPLEEEVYVVQPPGFIDKGNESKVYKLNKALYGLKQAP 184

Query: 72  RAWNKRIDAFFVQNGFSRCTTEYG 1
           RAWNKRID F    GFS+C  E+G
Sbjct: 185 RAWNKRIDRFLSDIGFSKCVIEHG 208