BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00026431
         (475 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX76161.1| retrovirus-related Pol polyprotein from transposo...   131   4e-33
gb|PNX84939.1| retrovirus-related Pol polyprotein from transposo...   131   6e-33
gb|PNX77250.1| retrovirus-related Pol polyprotein from transposo...   131   6e-33
gb|PNX77046.1| retrovirus-related Pol polyprotein from transposo...   131   7e-33
gb|KYP62479.1| Retrovirus-related Pol polyprotein from transposo...   126   1e-32
dbj|GAU19342.1| hypothetical protein TSUD_336290 [Trifolium subt...   131   2e-32
dbj|GAU31266.1| hypothetical protein TSUD_153410 [Trifolium subt...   131   2e-32
gb|KYP51569.1| Retrovirus-related Pol polyprotein from transposo...   123   2e-31
gb|PNX88215.1| hypothetical protein L195_g044317, partial [Trifo...   125   5e-31
gb|PNX93473.1| retrovirus-related Pol polyprotein from transposo...   127   6e-31
gb|PNY12955.1| retrovirus-related Pol polyprotein from transposo...   126   6e-31
dbj|GAU29238.1| hypothetical protein TSUD_362280 [Trifolium subt...   127   8e-31
gb|PNX93094.1| histone deacetylase, partial [Trifolium pratense]      126   1e-30
gb|KYP67571.1| Retrovirus-related Pol polyprotein from transposo...   124   2e-30
gb|PNX93258.1| histone deacetylase, partial [Trifolium pratense]      125   3e-30
gb|PNX92752.1| histone deacetylase [Trifolium pratense]               125   3e-30
gb|KYP51541.1| Retrovirus-related Pol polyprotein from transposo...   123   3e-30
gb|PNX75166.1| retrovirus-related Pol polyprotein from transposo...   124   3e-30
gb|PNX93462.1| histone deacetylase, partial [Trifolium pratense]      125   4e-30
gb|PNX78102.1| retrovirus-related Pol polyprotein from transposo...   124   4e-30

>gb|PNX76161.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 459

 Score =  131 bits (329), Expect = 4e-33
 Identities = 66/163 (40%), Positives = 101/163 (61%), Gaps = 5/163 (3%)
 Frame = +2

Query: 2   ITVRVVLTLALTHKWPIQQQDVNNIFLNALL*RKPI*LIALNRVTRVFFASCTRPSMIFG 181
           +T+R++LTLA+T+KWP+QQ D+NN FLN +L  +          +      C     ++G
Sbjct: 97  VTIRIILTLAVTYKWPVQQIDINNAFLNGILHEEVYMTQPTGFESSDKSLVCKLHKSLYG 156

Query: 182 LKQAPRAWYDSITQTLVSFGFLTRKCDPMKMALAFTSSFMWMISMSFALLLV-----IVL 346
           LKQAPRAWY+ +TQTL+  GF+  KCDP  M L    +  +++     +L+      ++ 
Sbjct: 157 LKQAPRAWYERLTQTLLQMGFIASKCDPSLMVLHQQGACTYVLIYVDDILITGSAPHLIQ 216

Query: 347 NIISRLSAGLALKQFGDLDYLLGIEVKHNASGSLLLTQTKYLK 475
           ++I +L+  LALKQ G++DY LGIEV   ASG L+L Q+KY++
Sbjct: 217 DVIQKLNFKLALKQLGEVDYFLGIEVHKTASGGLILNQSKYIR 259


>gb|PNX84939.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 499

 Score =  131 bits (329), Expect = 6e-33
 Identities = 66/163 (40%), Positives = 101/163 (61%), Gaps = 5/163 (3%)
 Frame = +2

Query: 2   ITVRVVLTLALTHKWPIQQQDVNNIFLNALL*RKPI*LIALNRVTRVFFASCTRPSMIFG 181
           +T+R++LTLA+T+KWP+QQ D+NN FLN +L  +          +      C     ++G
Sbjct: 166 VTIRIILTLAVTYKWPVQQIDINNAFLNGILHEEVYMTQPTGFESSDKSLVCKLHKSLYG 225

Query: 182 LKQAPRAWYDSITQTLVSFGFLTRKCDPMKMALAFTSSFMWMISMSFALLLV-----IVL 346
           LKQAPRAWY+ +TQTL+  GF+  KCDP  M L    +  +++     +L+      ++ 
Sbjct: 226 LKQAPRAWYERLTQTLLQMGFIASKCDPSLMVLHQQGACTYVLIYVDDILITGSAPHLIQ 285

Query: 347 NIISRLSAGLALKQFGDLDYLLGIEVKHNASGSLLLTQTKYLK 475
           ++I +L+  LALKQ G++DY LGIEV   ASG L+L Q+KY++
Sbjct: 286 DVIQKLNFKLALKQLGEVDYFLGIEVHKTASGGLILNQSKYIR 328


>gb|PNX77250.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 499

 Score =  131 bits (329), Expect = 6e-33
 Identities = 66/163 (40%), Positives = 101/163 (61%), Gaps = 5/163 (3%)
 Frame = +2

Query: 2   ITVRVVLTLALTHKWPIQQQDVNNIFLNALL*RKPI*LIALNRVTRVFFASCTRPSMIFG 181
           +T+R++LTLA+T+KWP+QQ D+NN FLN +L  +          +      C     ++G
Sbjct: 73  VTIRIILTLAVTYKWPVQQIDINNAFLNGILHEEVYMTQPTGFESSDKSLVCKLHKSLYG 132

Query: 182 LKQAPRAWYDSITQTLVSFGFLTRKCDPMKMALAFTSSFMWMISMSFALLLV-----IVL 346
           LKQAPRAWY+ +TQTL+  GF+  KCDP  M L    +  +++     +L+      ++ 
Sbjct: 133 LKQAPRAWYERLTQTLLQMGFIASKCDPSLMVLHQQGACTYVLIYVDDILITGSAPHLIQ 192

Query: 347 NIISRLSAGLALKQFGDLDYLLGIEVKHNASGSLLLTQTKYLK 475
           ++I +L+  LALKQ G++DY LGIEV   ASG L+L Q+KY++
Sbjct: 193 DVIQKLNFKLALKQLGEVDYFLGIEVHKTASGGLILNQSKYIR 235


>gb|PNX77046.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 515

 Score =  131 bits (329), Expect = 7e-33
 Identities = 66/163 (40%), Positives = 101/163 (61%), Gaps = 5/163 (3%)
 Frame = +2

Query: 2   ITVRVVLTLALTHKWPIQQQDVNNIFLNALL*RKPI*LIALNRVTRVFFASCTRPSMIFG 181
           +T+R++LTLA+T+KWP+QQ D+NN FLN +L  +          +      C     ++G
Sbjct: 182 VTIRIILTLAVTYKWPVQQIDINNAFLNGILHEEVYMTQPTGFESSDKSLVCKLHKSLYG 241

Query: 182 LKQAPRAWYDSITQTLVSFGFLTRKCDPMKMALAFTSSFMWMISMSFALLLV-----IVL 346
           LKQAPRAWY+ +TQTL+  GF+  KCDP  M L    +  +++     +L+      ++ 
Sbjct: 242 LKQAPRAWYERLTQTLLQMGFIASKCDPSLMVLHQQGACTYVLIYVDDILITGSAPHLIQ 301

Query: 347 NIISRLSAGLALKQFGDLDYLLGIEVKHNASGSLLLTQTKYLK 475
           ++I +L+  LALKQ G++DY LGIEV   ASG L+L Q+KY++
Sbjct: 302 DVIQKLNFKLALKQLGEVDYFLGIEVHKTASGGLILNQSKYIR 344


>gb|KYP62479.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 293

 Score =  126 bits (317), Expect = 1e-32
 Identities = 68/163 (41%), Positives = 97/163 (59%), Gaps = 5/163 (3%)
 Frame = +2

Query: 2   ITVRVVLTLALTHKWPIQQQDVNNIFLNALL*RKPI*LIALNRVTRVFFASCTRPSMIFG 181
           IT+RV+LTL +T+ WPI+Q D+NN FLN  L      +             C     I+G
Sbjct: 113 ITIRVILTLDVTYHWPIKQVDINNAFLNGFLEEDVYMMQPPGFEVSDKTLVCKLNKAIYG 172

Query: 182 LKQAPRAWYDSITQTLVSFGFLTRKCDPMKMALAFTSSFMWMISMSFALLLV-----IVL 346
           LKQAPRAWYD +T+TL+ FGF+  +CDP  +    +   ++M+     +++      +V 
Sbjct: 173 LKQAPRAWYDRLTKTLLGFGFVQSRCDPSLLIYKQSQVCIYMLIYVDDIIVTGNSHSLVQ 232

Query: 347 NIISRLSAGLALKQFGDLDYLLGIEVKHNASGSLLLTQTKYLK 475
           + IS+L+   ALKQ GDLDY LGIEVK   SGS++L Q KY++
Sbjct: 233 SFISKLNGVFALKQLGDLDYFLGIEVKRTNSGSVILNQAKYIR 275


>dbj|GAU19342.1| hypothetical protein TSUD_336290 [Trifolium subterraneum]
          Length = 1442

 Score =  131 bits (330), Expect = 2e-32
 Identities = 68/163 (41%), Positives = 102/163 (62%), Gaps = 5/163 (3%)
 Frame = +2

Query: 2    ITVRVVLTLALTHKWPIQQQDVNNIFLNALL*RKPI*LIALNRVTRVFFASCTRPSMIFG 181
            IT+R++LTLA+T+KWP+QQ DVNN FLN +L  +                 C     ++G
Sbjct: 1018 ITIRIILTLAVTNKWPVQQIDVNNAFLNGVLQEEVYMHQPAGFENADRSLVCKLHKSLYG 1077

Query: 182  LKQAPRAWYDSITQTLVSFGFLTRKCDPMKMALAFTSSFMWMISMSFALLLV-----IVL 346
            LKQAPRAWY+ +TQTL++FGF+  KCDP  +  +   +  +++     +L+      ++ 
Sbjct: 1078 LKQAPRAWYEKLTQTLLTFGFVKSKCDPSLLVHSHNGAVTYVLIYVDDILITGSAPHVIQ 1137

Query: 347  NIISRLSAGLALKQFGDLDYLLGIEVKHNASGSLLLTQTKYLK 475
            ++I +L+   ALKQ G LDY LGIEV   ++G+LLLTQTKY++
Sbjct: 1138 DLIHKLNVHFALKQLGQLDYFLGIEVHSLSTGALLLTQTKYIR 1180


>dbj|GAU31266.1| hypothetical protein TSUD_153410 [Trifolium subterraneum]
          Length = 844

 Score =  131 bits (329), Expect = 2e-32
 Identities = 66/163 (40%), Positives = 100/163 (61%), Gaps = 5/163 (3%)
 Frame = +2

Query: 2   ITVRVVLTLALTHKWPIQQQDVNNIFLNALL*RKPI*LIALNRVTRVFFASCTRPSMIFG 181
           +T+R++L+L +++KWPI+Q D+NN FLN  L  +   +      +      C     ++G
Sbjct: 423 VTIRLILSLGISYKWPIRQLDINNAFLNGSLDEEVYMVQPQGFESTDATLVCKLNKALYG 482

Query: 182 LKQAPRAWYDSITQTLVSFGFLTRKCDPMKMALAFTSSFMWMISMSFALLLV-----IVL 346
           LKQAPR W+D +T TL+ FGF   KCDP     +  S  ++++     ++++     +V 
Sbjct: 483 LKQAPRQWFDKLTTTLIQFGFNASKCDPSLFIYSQKSQVVYLLVYVDDIIIIGSSPTLVQ 542

Query: 347 NIISRLSAGLALKQFGDLDYLLGIEVKHNASGSLLLTQTKYLK 475
           +++ +L A  +LKQ GDLDY LGIEVKH   GSLLLTQTKY+K
Sbjct: 543 HLVDKLDAVFSLKQLGDLDYFLGIEVKHLKDGSLLLTQTKYIK 585


>gb|KYP51569.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 282

 Score =  123 bits (308), Expect = 2e-31
 Identities = 63/163 (38%), Positives = 96/163 (58%), Gaps = 5/163 (3%)
 Frame = +2

Query: 2   ITVRVVLTLALTHKWPIQQQDVNNIFLNALL*RKPI*LIALNRVTRVFFASCTRPSMIFG 181
           +T+R++LTLALTH WP+QQ D+NN FLN  L  +                 C     I+G
Sbjct: 113 VTIRLILTLALTHHWPLQQLDINNAFLNGTLDEEVYMTQPPGFEASDKNLVCKLHKAIYG 172

Query: 182 LKQAPRAWYDSITQTLVSFGFLTRKCDPMKMALAFTSSFMWMISMSFALLLV-----IVL 346
           LKQAPRAW++ +  TL+ F F   KCDP     +  +S ++++     +++      ++ 
Sbjct: 173 LKQAPRAWFEKLKSTLLQFNFQASKCDPSLFVYSHANSVIYILVYVDDIIITSNDSTLLH 232

Query: 347 NIISRLSAGLALKQFGDLDYLLGIEVKHNASGSLLLTQTKYLK 475
            ++S+L +  +LK  GDLDY LGIEVK  + GSL+LTQ+KY++
Sbjct: 233 TLVSQLHSTFSLKDLGDLDYFLGIEVKTQSDGSLILTQSKYIR 275


>gb|PNX88215.1| hypothetical protein L195_g044317, partial [Trifolium pratense]
          Length = 476

 Score =  125 bits (315), Expect = 5e-31
 Identities = 66/166 (39%), Positives = 102/166 (61%), Gaps = 9/166 (5%)
 Frame = +2

Query: 2   ITVRVVLTLALTHKWPIQQQDVNNIFLNALL*RKPI*LIALNRVTRVFFAS----CTRPS 169
           +TVR++LTLA+T+KW +QQ D+NN FLN +L  +    + + + T    +     C    
Sbjct: 52  VTVRIILTLAVTYKWAVQQIDINNAFLNGILQEE----VYMTQPTGFEVSDKSLVCKLHK 107

Query: 170 MIFGLKQAPRAWYDSITQTLVSFGFLTRKCDPMKMALAFTSSFMWMISMSFALLLV---- 337
            ++GLKQAPRAWYD +TQTL+  GF+  KCDP  +      +  +++     +L+     
Sbjct: 108 SLYGLKQAPRAWYDKLTQTLLQMGFVKSKCDPSLLVHHQQGACTYVLIYVDDILITGSAP 167

Query: 338 -IVLNIISRLSAGLALKQFGDLDYLLGIEVKHNASGSLLLTQTKYL 472
            ++ ++I +L+   ALKQ G++DY LGI+V H  SGSLLL Q+KY+
Sbjct: 168 HLIKDLIDKLNVKFALKQLGEVDYFLGIQVHHKPSGSLLLHQSKYI 213


>gb|PNX93473.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1181

 Score =  127 bits (319), Expect = 6e-31
 Identities = 64/163 (39%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
 Frame = +2

Query: 2    ITVRVVLTLALTHKWPIQQQDVNNIFLNALL*RKPI*LIALNRVTRVFFASCTRPSMIFG 181
            IT+R++L LA+++KWP++Q D+NN FLN  L  +   +      T      C     ++G
Sbjct: 760  ITIRLILALAISYKWPLKQLDINNAFLNGSLDEEVYMVQPQGFETTDSSLVCKLQKALYG 819

Query: 182  LKQAPRAWYDSITQTLVSFGFLTRKCDPMKMALAFTSSFMWMISMSFALL-----LVIVL 346
            LKQAPR W+D +  TL+ FGF   KCDP     +     ++++     ++     L +V 
Sbjct: 820  LKQAPRQWFDKLATTLIQFGFKASKCDPSLFIYSHNRQVVYLLVYVDDIIITGSSLTLVQ 879

Query: 347  NIISRLSAGLALKQFGDLDYLLGIEVKHNASGSLLLTQTKYLK 475
            +++++L +  +LKQ G+LDY LGIEVKH   GSLLLTQ+KY+K
Sbjct: 880  HLVTKLDSVFSLKQLGNLDYFLGIEVKHLTDGSLLLTQSKYIK 922


>gb|PNY12955.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 535

 Score =  126 bits (316), Expect = 6e-31
 Identities = 67/163 (41%), Positives = 99/163 (60%), Gaps = 5/163 (3%)
 Frame = +2

Query: 2   ITVRVVLTLALTHKWPIQQQDVNNIFLNALL*RKPI*LIALNRVTRVFFASCTRPSMIFG 181
           IT+RV+LTLA+T+KWP+QQ DVNN FLN  L  +          +      C     ++G
Sbjct: 109 ITIRVILTLAVTYKWPVQQIDVNNAFLNGWLQEEVYMKQPAGFESSDKSLVCKLHKSLYG 168

Query: 182 LKQAPRAWYDSITQTLVSFGFLTRKCDPMKMALAFTSSFMWMISMSFALLLV-----IVL 346
           LKQAPRAWY+ +TQ L+  GF+T KCDP  +      +  +++     +L+      ++ 
Sbjct: 169 LKQAPRAWYERLTQALLQMGFVTSKCDPSLLIHYQQGACTYVLIYVDDILITGSAPHLIK 228

Query: 347 NIISRLSAGLALKQFGDLDYLLGIEVKHNASGSLLLTQTKYLK 475
           ++I +L++  ALKQ G++DY LGIEV H  SG LLL Q+KY++
Sbjct: 229 DLIHKLNSQFALKQLGEVDYFLGIEVHHMPSGGLLLNQSKYIR 271


>dbj|GAU29238.1| hypothetical protein TSUD_362280 [Trifolium subterraneum]
          Length = 1433

 Score =  127 bits (318), Expect = 8e-31
 Identities = 64/163 (39%), Positives = 100/163 (61%), Gaps = 5/163 (3%)
 Frame = +2

Query: 2    ITVRVVLTLALTHKWPIQQQDVNNIFLNALL*RKPI*LIALNRVTRVFFASCTRPSMIFG 181
            +T+R++LTLA+T+KWP+QQ D+NN FLN +L  +          +      C     ++G
Sbjct: 1007 VTIRLILTLAVTYKWPVQQIDINNAFLNGVLQEEVYMTQPKGFESSDKSLVCKLHKSLYG 1066

Query: 182  LKQAPRAWYDSITQTLVSFGFLTRKCDPMKMALAFTSSFMWMISMSFALLLV-----IVL 346
            LKQAPRAWYD +TQTL+  GF+  +CDP  +      +  +++     +L+      ++ 
Sbjct: 1067 LKQAPRAWYDKLTQTLLQMGFVKSRCDPSLLVHHQQGTCTYVLVYVDDILITGSAPHLIK 1126

Query: 347  NIISRLSAGLALKQFGDLDYLLGIEVKHNASGSLLLTQTKYLK 475
            ++I +L+   ALKQ G++DY LGI+V+HN SG LLL Q+ Y+K
Sbjct: 1127 DLIQKLNVQFALKQLGEVDYFLGIQVQHNKSGGLLLHQSTYIK 1169


>gb|PNX93094.1| histone deacetylase, partial [Trifolium pratense]
          Length = 1513

 Score =  126 bits (317), Expect = 1e-30
 Identities = 71/168 (42%), Positives = 105/168 (62%), Gaps = 10/168 (5%)
 Frame = +2

Query: 2    ITVRVVLTLALTHKWPIQQQDVNNIFLNALL*RKPI*LIALNRVTRVFFAS-----CTRP 166
            +T+R++LTLA+T+KW IQQ D+NN FLN LL  +    + +++ T  F AS     C   
Sbjct: 1087 VTIRLILTLAVTYKWSIQQIDINNAFLNGLLQEE----VYMSQPTG-FEASDQSLVCKLH 1141

Query: 167  SMIFGLKQAPRAWYDSITQTLVSFGFLTRKCDPMKMALAFTSSFMWMISMSFALLLV--- 337
              ++GLKQAPRAWYD +TQ L+  GF+  KCDP  +      +  +++     +L+    
Sbjct: 1142 KSLYGLKQAPRAWYDRLTQELLQMGFVKSKCDPSLLIHHQHGACTYILIYVDDILITGSA 1201

Query: 338  --IVLNIISRLSAGLALKQFGDLDYLLGIEVKHNASGSLLLTQTKYLK 475
              ++ ++I +L+   ALKQ G++DY LGIEV H  SGSLLL Q+KY+K
Sbjct: 1202 PHLIKSVIQKLNTKFALKQLGEVDYFLGIEVHHMPSGSLLLNQSKYVK 1249


>gb|KYP67571.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 482

 Score =  124 bits (311), Expect = 2e-30
 Identities = 62/163 (38%), Positives = 99/163 (60%), Gaps = 5/163 (3%)
 Frame = +2

Query: 2   ITVRVVLTLALTHKWPIQQQDVNNIFLNALL*RKPI*LIALNRVTRVFFASCTRPSMIFG 181
           +TVR++LTL LTH+WP++Q DVNN FLN  L  +          +      C     I+G
Sbjct: 113 VTVRLILTLVLTHRWPLKQLDVNNAFLNGTLAEEVYMTQPTGFESSDKTLVCRLHKAIYG 172

Query: 182 LKQAPRAWYDSITQTLVSFGFLTRKCDPMKMALAFTSSFMWMISMSFALLL-----VIVL 346
           LKQAPRAW++ +  TL+ F F   KCDP     +  ++ ++++     +++     +++ 
Sbjct: 173 LKQAPRAWFEKLKSTLLQFHFQASKCDPSLFVYSVDNNIIYVLVYVDDIIITGNNSIVLQ 232

Query: 347 NIISRLSAGLALKQFGDLDYLLGIEVKHNASGSLLLTQTKYLK 475
           +++SRL +  +LK   DLDY LGIEVK+ + GSL+LTQ+KY++
Sbjct: 233 SLVSRLHSAFSLKDLRDLDYFLGIEVKNQSDGSLILTQSKYIR 275


>gb|PNX93258.1| histone deacetylase, partial [Trifolium pratense]
          Length = 1438

 Score =  125 bits (314), Expect = 3e-30
 Identities = 66/163 (40%), Positives = 99/163 (60%), Gaps = 5/163 (3%)
 Frame = +2

Query: 2    ITVRVVLTLALTHKWPIQQQDVNNIFLNALL*RKPI*LIALNRVTRVFFASCTRPSMIFG 181
            +TVR++LTLA+T+KW ++Q D+NN FLN LL  +          +      C     ++G
Sbjct: 1022 VTVRIILTLAVTYKWSVKQIDINNAFLNGLLQEEVYMTQPTGFESSDKSLVCKLHKSLYG 1081

Query: 182  LKQAPRAWYDSITQTLVSFGFLTRKCDPMKMALAFTSSFMWMISMSFALLLV-----IVL 346
            LKQAPRAWY+ +TQTLV  GF   KCDP  +      +  +++     +L+      ++ 
Sbjct: 1082 LKQAPRAWYERLTQTLVQMGFSASKCDPSLLVHHQQGACTYVLIYVDDILITGSSSQLIE 1141

Query: 347  NIISRLSAGLALKQFGDLDYLLGIEVKHNASGSLLLTQTKYLK 475
            ++I +L+   ALKQ G++DY LGIEV H +SG+LLL Q+KY+K
Sbjct: 1142 DLIHKLNIQFALKQLGEIDYFLGIEVHHMSSGALLLNQSKYIK 1184


>gb|PNX92752.1| histone deacetylase [Trifolium pratense]
          Length = 1455

 Score =  125 bits (314), Expect = 3e-30
 Identities = 64/163 (39%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
 Frame = +2

Query: 2    ITVRVVLTLALTHKWPIQQQDVNNIFLNALL*RKPI*LIALNRVTRVFFASCTRPSMIFG 181
            +T+R++LTLA+T+KW +QQ D+NN FLN +L  +          +      C     ++G
Sbjct: 1029 VTIRIILTLAVTYKWAVQQIDINNAFLNGILHEEVYMHQPAGFESSDKSLVCKLHKSLYG 1088

Query: 182  LKQAPRAWYDSITQTLVSFGFLTRKCDPMKMALAFTSSFMWMISMSFALLLV-----IVL 346
            LKQAPRAWY+ +TQTL+  GF+  KCDP  M L    +  +++     +L+      ++ 
Sbjct: 1089 LKQAPRAWYERLTQTLLQMGFIASKCDPSLMVLHQQGATTYVLIYVDDILITGSAPHLIQ 1148

Query: 347  NIISRLSAGLALKQFGDLDYLLGIEVKHNASGSLLLTQTKYLK 475
            ++I +L+   ALKQ G++DY LGIEV    SG LLL Q+KY++
Sbjct: 1149 DVIQKLNIKFALKQLGEVDYFLGIEVHKTVSGGLLLNQSKYIR 1191


>gb|KYP51541.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 437

 Score =  123 bits (308), Expect = 3e-30
 Identities = 63/163 (38%), Positives = 96/163 (58%), Gaps = 5/163 (3%)
 Frame = +2

Query: 2   ITVRVVLTLALTHKWPIQQQDVNNIFLNALL*RKPI*LIALNRVTRVFFASCTRPSMIFG 181
           +T+R++LTLALTH WP+QQ D+NN FLN  L  +                 C     I+G
Sbjct: 113 VTIRLILTLALTHHWPLQQLDINNAFLNGTLDEEVYMTQPPGFEASDKNLVCKLHKAIYG 172

Query: 182 LKQAPRAWYDSITQTLVSFGFLTRKCDPMKMALAFTSSFMWMISMSFALLLV-----IVL 346
           LKQAPRAW++ +  TL+ F F   KCDP     +  +S ++++     +++      ++ 
Sbjct: 173 LKQAPRAWFEKLKSTLLQFNFQASKCDPSLFVYSHANSVIYILVYVDDIIITSNDSTLLH 232

Query: 347 NIISRLSAGLALKQFGDLDYLLGIEVKHNASGSLLLTQTKYLK 475
            ++S+L +  +LK  GDLDY LGIEVK  + GSL+LTQ+KY++
Sbjct: 233 TLVSQLHSTFSLKDLGDLDYFLGIEVKTQSDGSLILTQSKYIR 275


>gb|PNX75166.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 499

 Score =  124 bits (310), Expect = 3e-30
 Identities = 67/163 (41%), Positives = 96/163 (58%), Gaps = 5/163 (3%)
 Frame = +2

Query: 2   ITVRVVLTLALTHKWPIQQQDVNNIFLNALL*RKPI*LIALNRVTRVFFASCTRPSMIFG 181
           +TVR++LTLA+T+KW +QQ D+NN FLN LL  +                 C     ++G
Sbjct: 73  VTVRLILTLAITYKWSVQQIDINNAFLNGLLQEEVYMSQPAGFENSDKTLVCKLHKSLYG 132

Query: 182 LKQAPRAWYDSITQTLVSFGFLTRKCDPMKMALAFTSSFMWMISMSFALLLV-----IVL 346
           LKQAPRAWY+ +T TL+  GF+  +CDP  +      +  +++     +L+      +V 
Sbjct: 133 LKQAPRAWYERLTHTLLQMGFVKSRCDPSLLVHHKHGACTYVLVYVDDILITGSDSHLVK 192

Query: 347 NIISRLSAGLALKQFGDLDYLLGIEVKHNASGSLLLTQTKYLK 475
           ++I +L+   ALKQ G+LDY LGIEV H  SG LLL QTKY+K
Sbjct: 193 DLIHKLNVKFALKQLGELDYFLGIEVHHKPSGGLLLHQTKYVK 235


>gb|PNX93462.1| histone deacetylase, partial [Trifolium pratense]
          Length = 1489

 Score =  125 bits (313), Expect = 4e-30
 Identities = 61/163 (37%), Positives = 101/163 (61%), Gaps = 5/163 (3%)
 Frame = +2

Query: 2    ITVRVVLTLALTHKWPIQQQDVNNIFLNALL*RKPI*LIALNRVTRVFFASCTRPSMIFG 181
            +T+R++L+LA+++KWP++Q D+NN FLN  L  +   +       +     C     ++G
Sbjct: 1068 VTIRLILSLAISYKWPLKQLDINNAFLNGSLNEEVYMVQPQGFEEKDSSLVCKLNKALYG 1127

Query: 182  LKQAPRAWYDSITQTLVSFGFLTRKCDPMKMALAFTSSFMWMISMSFALLLV-----IVL 346
            LKQAPR W+D +T TL+ FGF   KCDP     +     ++++     +++      +V 
Sbjct: 1128 LKQAPRQWFDKLTSTLIQFGFKASKCDPSLFIYSKNCQIVYLLVYVDDIIITGSSPDLVQ 1187

Query: 347  NIISRLSAGLALKQFGDLDYLLGIEVKHNASGSLLLTQTKYLK 475
            +++++L +  +LKQ G+L+Y LGIEVK+ + GSLLLTQTKY+K
Sbjct: 1188 HLVNKLDSVFSLKQLGELEYFLGIEVKNLSDGSLLLTQTKYIK 1230


>gb|PNX78102.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 535

 Score =  124 bits (310), Expect = 4e-30
 Identities = 63/163 (38%), Positives = 99/163 (60%), Gaps = 5/163 (3%)
 Frame = +2

Query: 2   ITVRVVLTLALTHKWPIQQQDVNNIFLNALL*RKPI*LIALNRVTRVFFASCTRPSMIFG 181
           +T+R++LTLA+T+KW +QQ D+NN FLN +L  +          +      C     ++G
Sbjct: 109 VTIRIILTLAVTYKWSVQQIDINNAFLNGILQEEVYMTQPPGFESSDKNLVCKLHKALYG 168

Query: 182 LKQAPRAWYDSITQTLVSFGFLTRKCDPMKMALAFTSSFMWMISMSFALLLV-----IVL 346
           LKQAPRAWYD +TQTL+  GF   +CDP  +      +  +++     +L+      ++ 
Sbjct: 169 LKQAPRAWYDRLTQTLLQMGFTKSRCDPSLLVHHQNGACTYVLVYVDDILITGSAPHLIK 228

Query: 347 NIISRLSAGLALKQFGDLDYLLGIEVKHNASGSLLLTQTKYLK 475
           ++I +L+   ALKQ G++DY LG+EV H+ SGS+LL Q+KY+K
Sbjct: 229 DLIHKLNIKFALKQLGEVDYFLGLEVHHSTSGSILLHQSKYIK 271