BLASTX nr result

ID: Astragalus23_contig00026200 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00026200
         (348 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX75347.1| geminivirus rep-interacting motor [Trifolium prat...    64   3e-09
gb|PNX75495.1| hypothetical protein L195_g031432 [Trifolium prat...    57   2e-07

>gb|PNX75347.1| geminivirus rep-interacting motor [Trifolium pratense]
          Length = 541

 Score = 63.5 bits (153), Expect = 3e-09
 Identities = 31/61 (50%), Positives = 46/61 (75%)
 Frame = -3

Query: 346 DQELAKNTRSVHVIHNMVQPTLDGYNVSILAYGQTHFERTHIMEELSFGWVFNDLFLFKN 167
           DQ L  +TRSV V+H+MVQPTLD YN S+LAYGQ H  +T+ ME++S+  +F+++  F+ 
Sbjct: 322 DQGLVTSTRSVIVVHHMVQPTLDRYNSSMLAYGQNHSGKTNFMEKVSYD-LFHNVSCFER 380

Query: 166 M 164
           +
Sbjct: 381 V 381


>gb|PNX75495.1| hypothetical protein L195_g031432 [Trifolium pratense]
          Length = 214

 Score = 57.4 bits (137), Expect = 2e-07
 Identities = 26/47 (55%), Positives = 36/47 (76%)
 Frame = -3

Query: 346 DQELAKNTRSVHVIHNMVQPTLDGYNVSILAYGQTHFERTHIMEELS 206
           +Q L K TR+  +IH M+QP LD Y+VSI+AYGQ H E+THIM +++
Sbjct: 74  EQGLEKYTRAAIIIHYMMQPCLDRYDVSIVAYGQNHSEKTHIMVDVA 120


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